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Poole S, Aning O, McKee V, Catley T, Nielsen A, Thisgaard H, Johansson P, Menounou G, Hennessy J, Slator C, Gibney A, Pyne A, McGorman B, Westerlund F, Kellett A. Design and in vitro anticancer assessment of a click chemistry-derived dinuclear copper artificial metallo-nuclease. Nucleic Acids Res 2025; 53:gkae1250. [PMID: 39777469 PMCID: PMC11705080 DOI: 10.1093/nar/gkae1250] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2024] [Revised: 11/12/2024] [Accepted: 12/10/2024] [Indexed: 01/11/2025] Open
Abstract
Copper compounds with artificial metallo-nuclease (AMN) activity are mechanistically unique compared to established metallodrugs. Here, we describe the development of a new dinuclear copper AMN, Cu2-BPL-C6 (BPL-C6 = bis-1,10-phenanthroline-carbon-6), prepared using click chemistry that demonstrates site-specific DNA recognition with low micromolar cleavage activity. The BPL-C6 ligand was designed to force two redox-active copper centres-central for enhancing AMN activity-to bind DNA, via two phenanthroline ligands separated by an aliphatic linker. DNA-binding experiments, involving circular dichroism spectroscopy, agarose gel electrophoresis and fluorescence quenching, revealed a preference for binding with adenine-thymine-rich DNA. The oxidative cleavage mechanism of Cu2-BPL-C6 was then elucidated using in vitro molecular and biophysical assays, including in-liquid atomic force microscopy analysis, revealing potent DNA cleavage mediated via superoxide and hydrogen peroxide oxidative pathways. Single-molecule analysis with peripheral blood mononuclear cells identified upregulated single-strand DNA lesions in Cu2-BPL-C6-treated cells. Using specific base excision repair (BER) enzymes, we showed that Endo IV selectively repairs these lesions indicating that the complex generates apurinic and apyrimidinic adducts. Broad spectrum anticancer evaluation of BPL-C6 was performed by the National Cancer Institute's 60 human cell line screen (NCI-60) and revealed selectivity for certain melanoma, breast, colon and non-small cell lung cancer cell lines.
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Affiliation(s)
- Simon Poole
- School of Chemical Sciences, Dublin City University, Glasnevin, Dublin 9, Ireland
| | - Obed Akwasi Aning
- Department of Life Sciences, Chalmers University of Technology, Gothenburg, Sweden
| | - Vickie McKee
- School of Chemical Sciences, Dublin City University, Glasnevin, Dublin 9, Ireland
- Department of Physics, Chemistry and Pharmacy University of Southern Denmark, Campusvej 55, 5230 Odense M, Denmark
| | - Thomas Catley
- Department of Materials Science and Engineering, University of Sheffield, Sheffield, UK
| | | | - Helge Thisgaard
- Department of Nuclear Medicine, Odense University Hospital, Odense, Denmark
- Department of Clinical Research, University of Southern Denmark, Odense, Denmark
| | - Pegah Johansson
- Department of Clinical Chemistry, Sahlgrenska University Hospital, Region Vastra Gotaland, Gothenburg, Sweden
- Department of Laboratory Medicine, Institute of Biomedicine, Sahlgrenska Academy at University of Gothenburg, Sweden
| | - Georgia Menounou
- School of Chemical Sciences, Dublin City University, Glasnevin, Dublin 9, Ireland
| | - Joseph Hennessy
- School of Chemical Sciences, Dublin City University, Glasnevin, Dublin 9, Ireland
| | - Creina Slator
- School of Chemical Sciences, Dublin City University, Glasnevin, Dublin 9, Ireland
| | - Alex Gibney
- School of Chemical Sciences, Dublin City University, Glasnevin, Dublin 9, Ireland
| | - Alice Pyne
- Department of Materials Science and Engineering, University of Sheffield, Sheffield, UK
| | - Bríonna McGorman
- School of Chemical Sciences, Dublin City University, Glasnevin, Dublin 9, Ireland
| | - Fredrik Westerlund
- Department of Life Sciences, Chalmers University of Technology, Gothenburg, Sweden
| | - Andrew Kellett
- School of Chemical Sciences, Dublin City University, Glasnevin, Dublin 9, Ireland
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Kost C, Scheffer U, Kalden E, Göbel MW. Efficient Cleavage of pUC19 DNA by Tetraaminonaphthols. ChemistryOpen 2024:e202400157. [PMID: 39460429 DOI: 10.1002/open.202400157] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/09/2024] [Indexed: 10/28/2024] Open
Abstract
In an attempt to create models of phosphodiesterases, we previously investigated bis(guanidinium) naphthols. Such metal-free anion receptors cleaved aryl phosphates and also plasmid DNA. Observed reaction rates, however, could not compete with those of highly reactive metal complexes. In the present study, we have replaced the guanidines by ethylene diamine side chains which accelerates the plasmid cleavage by compound 13 significantly (1 mM 13: t1/2=22 h). Further gains in reactivity are achieved by azo coupling of the naphthol unit. The electron accepting azo group decreases the pKa of the hydroxy group. It can also serve as a dye label and a handle for attaching DNA binding moieties. The resulting azo naphthol 17 not only nicks (1 mM 17: t1/2~1 h) but also linearizes pUC19 DNA. Although the high reactivity of 17 seems to result in part from aggregation, in the presence of EDTA azo naphthol 17 obeys first order kinetics (1 mM 17: t1/2=4.8 h), reacts four times faster than naphthol 13 and surpasses by far the former bis(guanidinium) naphthols 4 and 5.
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Affiliation(s)
- Catharina Kost
- Institut für Organische Chemie und Chemische Biologie, Goethe-Universität, Frankfurt am Main, Max-von-Laue-Str. 7, D-60438, Frankfurt am Main, Germany
| | - Ute Scheffer
- Institut für Organische Chemie und Chemische Biologie, Goethe-Universität, Frankfurt am Main, Max-von-Laue-Str. 7, D-60438, Frankfurt am Main, Germany
| | - Elisabeth Kalden
- Institut für Organische Chemie und Chemische Biologie, Goethe-Universität, Frankfurt am Main, Max-von-Laue-Str. 7, D-60438, Frankfurt am Main, Germany
| | - Michael Wilhelm Göbel
- Institut für Organische Chemie und Chemische Biologie, Goethe-Universität, Frankfurt am Main, Max-von-Laue-Str. 7, D-60438, Frankfurt am Main, Germany
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Baydeniz ŞNU, Uçan Hİ, Sevgi F, Obalı İ, Yılmaz Obalı A. Highly Fluorescent π-Conjugated Azomethines and Divalent Metal Complexes as Antibacterial and Antibiofilm Nominees. J Fluoresc 2024:10.1007/s10895-024-03855-x. [PMID: 39078608 DOI: 10.1007/s10895-024-03855-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2024] [Accepted: 07/15/2024] [Indexed: 07/31/2024]
Abstract
π-Conjugated azomethine ligands differing in the naphthalene or phenylmethane-centered core structure and their divalent cobalt, nickel, copper, and zinc metal complexes were prepared and well-characterized by spectral analyses in solid state. Magnetic natures of the complexes were determined by magnetic susceptibility measurements in solid-state. Their remarkable photophysical characteristics were recorded by Uv-vis and Fluorescence spectroscopic techniques. At their excitation wavelenght of 265 nm, all molecules exhibited triple fluorescence emission bands with promising intensities above 673 nm in near infra-red region. Antibacterial and antibiofilm activities of the π-conjugated azomethines are promising for potential applications in medical and healthcare settings. Hence, the antibacterial/antibiofilm activity of the π-conjugated azomethine ligands and their metal complexes against some clinically important bacteria namely Staphylococcus aureus (MSSA), Methicillin-resistant Staphylococcus aureus (MRSA), Staphylococcus epidermidis, Escherichia coli, Pseudomonas aeruginosa and Proteus mirabilis was investigated, and the obtained results have shown that the ligands and complexes had a remarkable antibacterial effect, especially on Proteus mirabilis. Metal complexes have been found to have a significant inhibitory effect on biofilm formation by MRSA, MSSA, and P. mirabilis compared to ligands. The copper (II) complex of ligand-2 showed the highest inhibition percentage, significantly reducing biofilm formation for MRSA and MSSA. Furthermore, cobalt (II) complexes of the ligands selectively inhibited the growth of the opportunistic pathogen P. mirabilis biofilms, indicating that metal complexes might be a good choice for future antibiofilm studies.
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Affiliation(s)
| | - Halil İsmet Uçan
- Department of Chemistry, Science Faculty, Selcuk University, Konya, Türkiye
| | - Fatih Sevgi
- Department of Medical Services and Techniques, Vocational School of Health Services, Selcuk University, Konya, Türkiye
| | - İhsan Obalı
- Department of Biology, Science Faculty, Selcuk University, Konya, Türkiye
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Das S, Strachanowska M, Wadowski P, Juszczak M, Tokarz P, Kosińska A, Palusiak M, Rybarczyk-Pirek AJ, Wzgarda-Raj K, Vasudevan S, Chworos A, Woźniak K, Rudolf B. Synthesis, anticancer activity, and molecular docking of half-sandwich iron(II) cyclopentadienyl complexes with maleimide and phosphine or phosphite ligands. Sci Rep 2024; 14:5634. [PMID: 38454122 PMCID: PMC10920834 DOI: 10.1038/s41598-024-56339-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Accepted: 03/05/2024] [Indexed: 03/09/2024] Open
Abstract
In these studies, we designed and investigated the potential anticancer activity of five iron(II) cyclopentadienyl complexes bearing different phosphine and phosphite ligands. All complexes were characterized with spectroscopic analysis viz. NMR, FT-IR, ESI-MS, UV-Vis, fluorescence, XRD (for four complexes) and elemental analyses. For biological studies, we used three types of cells-normal peripheral blood mononuclear (PBM) cells, leukemic HL-60 cells and non-small-cell lung cancer A549 cells. We evaluated cell viability and DNA damage after cell incubation with these complexes. We observed that all iron(II) complexes were more cytotoxic for HL-60 cells than for A549 cells. The complex CpFe(CO)(P(OPh)3)(η1-N-maleimidato) 3b was the most cytotoxic with IC50 = 9.09 µM in HL-60 cells, IC50 = 19.16 µM in A549 and IC50 = 5.80 µM in PBM cells. The complex CpFe(CO)(P(Fu)3)(η1-N-maleimidato) 2b was cytotoxic only for both cancer cell lines, with IC50 = 10.03 µM in HL-60 cells and IC50 = 73.54 µM in A549 cells. We also found the genotoxic potential of the complex 2b in both types of cancer cells. However, the complex CpFe(CO)2(η1-N-maleimidato) 1 which we studied previously, was much more genotoxic than complex 2b, especially for A549 cells. The plasmid relaxation assay showed that iron(II) complexes do not induce strand breaks in fully paired ds-DNA. The DNA titration experiment showed no intercalation of complex 2b into DNA. Molecular docking revealed however that complexes CpFe(CO)(PPh3) (η1-N-maleimidato) 2a, 2b, 3b and CpFe(CO)(P(OiPr)3)(η1-N-maleimidato) 3c have the greatest potential to bind to mismatched DNA. Our studies demonstrated that the iron(II) complex 1 and 2b are the most interesting compounds in terms of selective cytotoxic action against cancer cells. However, the cellular mechanism of their anticancer activity requires further research.
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Affiliation(s)
- Sujoy Das
- Department of Organic Chemistry, University of Lodz, Faculty of Chemistry, Tamka 12, 91-403, Lodz, Poland
| | - Marcelina Strachanowska
- Department of Molecular Genetics, University of Lodz, Faculty of Biology and Environmental Protection, Pomorska 141/143, 90-236, Lodz, Poland
| | - Piotr Wadowski
- Department of Molecular Genetics, University of Lodz, Faculty of Biology and Environmental Protection, Pomorska 141/143, 90-236, Lodz, Poland
| | - Michał Juszczak
- Department of Molecular Genetics, University of Lodz, Faculty of Biology and Environmental Protection, Pomorska 141/143, 90-236, Lodz, Poland
| | - Paulina Tokarz
- Department of Molecular Genetics, University of Lodz, Faculty of Biology and Environmental Protection, Pomorska 141/143, 90-236, Lodz, Poland
| | - Aneta Kosińska
- Department of Organic Chemistry, University of Lodz, Faculty of Chemistry, Tamka 12, 91-403, Lodz, Poland
| | - Marcin Palusiak
- Department of Physical Chemistry, University of Lodz, Faculty of Chemistry, Pomorska 163/165, 90-236, Lodz, Poland
| | - Agnieszka J Rybarczyk-Pirek
- Department of Physical Chemistry, University of Lodz, Faculty of Chemistry, Pomorska 163/165, 90-236, Lodz, Poland
| | - Kinga Wzgarda-Raj
- Department of Physical Chemistry, University of Lodz, Faculty of Chemistry, Pomorska 163/165, 90-236, Lodz, Poland
| | - Saranya Vasudevan
- Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363, Lodz, Poland
| | - Arkadiusz Chworos
- Centre of Molecular and Macromolecular Studies, Polish Academy of Sciences, Sienkiewicza 112, 90-363, Lodz, Poland
| | - Katarzyna Woźniak
- Department of Molecular Genetics, University of Lodz, Faculty of Biology and Environmental Protection, Pomorska 141/143, 90-236, Lodz, Poland.
| | - Bogna Rudolf
- Department of Organic Chemistry, University of Lodz, Faculty of Chemistry, Tamka 12, 91-403, Lodz, Poland.
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Buziková M, Willimetz R, Kotek J. The Hydrolytic Activity of Copper(II) Complexes with 1,4,7-Triazacyclononane Derivatives for the Hydrolysis of Phosphate Diesters. Molecules 2023; 28:7542. [PMID: 38005264 PMCID: PMC10673150 DOI: 10.3390/molecules28227542] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/17/2023] [Revised: 11/06/2023] [Accepted: 11/09/2023] [Indexed: 11/26/2023] Open
Abstract
A set of substituted 1,4,7-triazacyclononane ligands was synthesised, including a wide series of novel derivatives bearing a thiazole or thiophene side group, with the potential to incorporate these derivatives into a polymeric material; some previously known/studied ligands were also synthesised for comparative purposes. The corresponding copper(II) complexes were prepared, and their ability to mediate the hydrolysis of phosphate ester bonds was studied via UV-Vis spectrophotometry, using bis(p-nitrophenyl)phosphate as a model substrate. Some of the prepared complexes showed a considerable enhancement of the phosphate ester hydrolysis in comparison with previously studied systems, which makes them some of the most effective complexes ever tested for this purpose. Therefore, these novel, potentially bifunctional systems could provide the possibility of creating new coating materials for medicinal devices that could prevent biofilm formation.
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Affiliation(s)
| | | | - Jan Kotek
- Department of Inorganic Chemistry, Charles University, Hlavova 2030, 128 40 Prague, Czech Republic
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