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For: Ahn S, Tanksley SD. Comparative linkage maps of the rice and maize genomes. Proc Natl Acad Sci U S A 1993;90:7980-4. [PMID: 8103599 PMCID: PMC47271 DOI: 10.1073/pnas.90.17.7980] [Citation(s) in RCA: 446] [Impact Index Per Article: 14.4] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]  Open
Number Cited by Other Article(s)
1
Mascher M, Marone MP, Schreiber M, Stein N. Are cereal grasses a single genetic system? NATURE PLANTS 2024;10:719-731. [PMID: 38605239 DOI: 10.1038/s41477-024-01674-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/27/2023] [Accepted: 03/17/2024] [Indexed: 04/13/2024]
2
Zhou Y, Yu Z, Chebotarov D, Chougule K, Lu Z, Rivera LF, Kathiresan N, Al-Bader N, Mohammed N, Alsantely A, Mussurova S, Santos J, Thimma M, Troukhan M, Fornasiero A, Green CD, Copetti D, Kudrna D, Llaca V, Lorieux M, Zuccolo A, Ware D, McNally K, Zhang J, Wing RA. Pan-genome inversion index reveals evolutionary insights into the subpopulation structure of Asian rice. Nat Commun 2023;14:1567. [PMID: 36944612 PMCID: PMC10030860 DOI: 10.1038/s41467-023-37004-y] [Citation(s) in RCA: 13] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Grants] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2022] [Accepted: 02/27/2023] [Indexed: 03/23/2023]  Open
3
Li D, Bai D, Tian Y, Li YH, Zhao C, Wang Q, Guo S, Gu Y, Luan X, Wang R, Yang J, Hawkesford MJ, Schnable JC, Jin X, Qiu LJ. Time series canopy phenotyping enables the identification of genetic variants controlling dynamic phenotypes in soybean. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2023;65:117-132. [PMID: 36218273 DOI: 10.1111/jipb.13380] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2022] [Accepted: 10/10/2022] [Indexed: 06/16/2023]
4
Nanni AV, Morse AM, Newman JRB, Choquette NE, Wedow JM, Liu Z, Leakey ADB, Conesa A, Ainsworth EA, McIntyre LM. Variation in leaf transcriptome responses to elevated ozone corresponds with physiological sensitivity to ozone across maize inbred lines. Genetics 2022;221:iyac080. [PMID: 35579358 PMCID: PMC9339315 DOI: 10.1093/genetics/iyac080] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/30/2022] [Accepted: 04/27/2022] [Indexed: 11/13/2022]  Open
5
Nousias O, Oikonomou S, Manousaki T, Papadogiannis V, Angelova N, Tsaparis D, Tsakogiannis A, Duncan N, Estevez A, Tzokas K, Pavlidis M, Chatziplis D, Tsigenopoulos CS. Linkage mapping, comparative genome analysis, and QTL detection for growth in a non-model teleost, the meagre Argyrosomus regius, using ddRAD sequencing. Sci Rep 2022;12:5301. [PMID: 35351938 PMCID: PMC8964699 DOI: 10.1038/s41598-022-09289-4] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2021] [Accepted: 03/17/2022] [Indexed: 01/05/2023]  Open
6
Molecular sexual determinants in Pistacia genus by KASP assay. Mol Biol Rep 2022;49:5473-5482. [PMID: 35235154 DOI: 10.1007/s11033-022-07285-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2021] [Accepted: 02/18/2022] [Indexed: 10/19/2022]
7
Pieczonka SA, Paravicini S, Rychlik M, Schmitt-Kopplin P. On the Trail of the German Purity Law: Distinguishing the Metabolic Signatures of Wheat, Corn and Rice in Beer. Front Chem 2021;9:715372. [PMID: 34354980 PMCID: PMC8329485 DOI: 10.3389/fchem.2021.715372] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Accepted: 07/06/2021] [Indexed: 11/13/2022]  Open
8
Long T, Xu B, Hu Y, Wang Y, Mao C, Wang Y, Zhang J, Liu H, Huang H, Liu Y, Yu G, Zhao C, Li Y, Huang Y. Genome-wide identification of ZmSnRK2 genes and functional analysis of ZmSnRK2.10 in ABA signaling pathway in maize (Zea mays L). BMC PLANT BIOLOGY 2021;21:309. [PMID: 34210268 PMCID: PMC8246669 DOI: 10.1186/s12870-021-03064-9] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2020] [Accepted: 05/25/2021] [Indexed: 05/12/2023]
9
Shvachko NA, Semilet TV, Tikhonova NG. Trichomes of Higher Plants: Homologous Series in Hereditary Variability and Molecular Genetic Mechanisms. RUSS J GENET+ 2020. [DOI: 10.1134/s1022795420110083] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
10
Huang K, Rieseberg LH. Frequency, Origins, and Evolutionary Role of Chromosomal Inversions in Plants. FRONTIERS IN PLANT SCIENCE 2020;11:296. [PMID: 32256515 DOI: 10.3389/fpls.2020.00296/full] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Subscribe] [Scholar Register] [Received: 12/10/2019] [Accepted: 02/27/2020] [Indexed: 05/24/2023]
11
Huang K, Rieseberg LH. Frequency, Origins, and Evolutionary Role of Chromosomal Inversions in Plants. FRONTIERS IN PLANT SCIENCE 2020;11:296. [PMID: 32256515 PMCID: PMC7093584 DOI: 10.3389/fpls.2020.00296] [Citation(s) in RCA: 66] [Impact Index Per Article: 16.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/2019] [Accepted: 02/27/2020] [Indexed: 05/11/2023]
12
Deng T, Huang W, Ren J, Ma X, Ge Y, Chen Y. Verification and applicability of endogenous reference genes for quantifying GM rice by digital PCR. Anal Biochem 2019;587:113442. [DOI: 10.1016/j.ab.2019.113442] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2019] [Revised: 09/16/2019] [Accepted: 09/16/2019] [Indexed: 11/28/2022]
13
Gao J, Dai G, Zhou W, Liang H, Huang J, Qing D, Chen W, Wu H, Yang X, Li D, Gao L, Deng G. Mapping and Identifying a Candidate Gene Plr4, a Recessive Gene Regulating Purple Leaf in Rice, by Using Bulked Segregant and Transcriptome Analysis with Next-Generation Sequencing. Int J Mol Sci 2019;20:ijms20184335. [PMID: 31487931 PMCID: PMC6769577 DOI: 10.3390/ijms20184335] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2019] [Revised: 09/01/2019] [Accepted: 09/02/2019] [Indexed: 01/01/2023]  Open
14
Batra R, Agarwal P, Tyagi S, Saini DK, Kumar V, Kumar A, Kumar S, Balyan HS, Pandey R, Gupta PK. A study of CCD8 genes/proteins in seven monocots and eight dicots. PLoS One 2019;14:e0213531. [PMID: 30861026 PMCID: PMC6413960 DOI: 10.1371/journal.pone.0213531] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2018] [Accepted: 02/23/2019] [Indexed: 02/08/2023]  Open
15
Huang S, Yu J, Li Y, Wang J, Wang X, Qi H, Xu M, Qin H, Yin Z, Mei H, Chang H, Gao H, Liu S, Zhang Z, Zhang S, Zhu R, Liu C, Wu X, Jiang H, Hu Z, Xin D, Chen Q, Qi Z. Identification of Soybean Genes Related to Soybean Seed Protein Content Based on Quantitative Trait Loci Collinearity Analysis. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2019;67:258-274. [PMID: 30525587 DOI: 10.1021/acs.jafc.8b04602] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/13/2023]
16
Fang C, Luo J. Metabolic GWAS-based dissection of genetic bases underlying the diversity of plant metabolism. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2019;97:91-100. [PMID: 30231195 DOI: 10.1111/tpj.14097] [Citation(s) in RCA: 101] [Impact Index Per Article: 20.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2018] [Revised: 09/07/2018] [Accepted: 09/11/2018] [Indexed: 05/21/2023]
17
Fang C, Fernie AR, Luo J. Exploring the Diversity of Plant Metabolism. TRENDS IN PLANT SCIENCE 2019;24:83-98. [PMID: 30297176 DOI: 10.1016/j.tplants.2018.09.006] [Citation(s) in RCA: 166] [Impact Index Per Article: 33.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/08/2018] [Revised: 09/05/2018] [Accepted: 09/11/2018] [Indexed: 05/23/2023]
18
The Maize Pan-Genome. COMPENDIUM OF PLANT GENOMES 2018. [DOI: 10.1007/978-3-319-97427-9_2] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
19
N’Diaye A, Haile JK, Fowler DB, Ammar K, Pozniak CJ. Effect of Co-segregating Markers on High-Density Genetic Maps and Prediction of Map Expansion Using Machine Learning Algorithms. FRONTIERS IN PLANT SCIENCE 2017;8:1434. [PMID: 28878789 PMCID: PMC5572363 DOI: 10.3389/fpls.2017.01434] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/20/2017] [Accepted: 08/03/2017] [Indexed: 05/28/2023]
20
Kumar J, Gupta DS, Gupta S, Dubey S, Gupta P, Kumar S. Quantitative trait loci from identification to exploitation for crop improvement. PLANT CELL REPORTS 2017;36:1187-1213. [PMID: 28352970 DOI: 10.1007/s00299-017-2127-y] [Citation(s) in RCA: 37] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/09/2016] [Accepted: 03/09/2017] [Indexed: 05/24/2023]
21
Butler JB, Vaillancourt RE, Potts BM, Lee DJ, King GJ, Baten A, Shepherd M, Freeman JS. Comparative genomics of Eucalyptus and Corymbia reveals low rates of genome structural rearrangement. BMC Genomics 2017;18:397. [PMID: 28532390 PMCID: PMC5441008 DOI: 10.1186/s12864-017-3782-7] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/09/2016] [Accepted: 05/10/2017] [Indexed: 11/25/2022]  Open
22
Comparative and parallel genome-wide association studies for metabolic and agronomic traits in cereals. Nat Commun 2016;7:12767. [PMID: 27698483 PMCID: PMC5059443 DOI: 10.1038/ncomms12767] [Citation(s) in RCA: 158] [Impact Index Per Article: 19.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/11/2015] [Accepted: 07/29/2016] [Indexed: 01/19/2023]  Open
23
Brunet FG, Volff JN, Schartl M. Whole Genome Duplications Shaped the Receptor Tyrosine Kinase Repertoire of Jawed Vertebrates. Genome Biol Evol 2016;8:1600-13. [PMID: 27260203 PMCID: PMC4898815 DOI: 10.1093/gbe/evw103] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]  Open
24
Van Zee JP, Schlueter JA, Schlueter S, Dixon P, Sierra CAB, Hill CA. Paralog analyses reveal gene duplication events and genes under positive selection in Ixodes scapularis and other ixodid ticks. BMC Genomics 2016;17:241. [PMID: 26984180 PMCID: PMC4793754 DOI: 10.1186/s12864-015-2350-2] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2015] [Accepted: 12/21/2015] [Indexed: 11/12/2022]  Open
25
Jue D, Sang X, Lu S, Dong C, Zhao Q, Chen H, Jia L. Genome-Wide Identification, Phylogenetic and Expression Analyses of the Ubiquitin-Conjugating Enzyme Gene Family in Maize. PLoS One 2015;10:e0143488. [PMID: 26606743 PMCID: PMC4659669 DOI: 10.1371/journal.pone.0143488] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/05/2015] [Accepted: 11/05/2015] [Indexed: 02/07/2023]  Open
26
Wang X, Wang J, Jin D, Guo H, Lee TH, Liu T, Paterson AH. Genome Alignment Spanning Major Poaceae Lineages Reveals Heterogeneous Evolutionary Rates and Alters Inferred Dates for Key Evolutionary Events. MOLECULAR PLANT 2015;8:885-98. [PMID: 25896453 DOI: 10.1016/j.molp.2015.04.004] [Citation(s) in RCA: 96] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/07/2014] [Revised: 03/13/2015] [Accepted: 04/06/2015] [Indexed: 05/06/2023]
27
Jin T, Chen J, Zhu L, Zhao Y, Guo J, Huang Y. Comparative mapping combined with homology-based cloning of the rice genome reveals candidate genes for grain zinc and iron concentration in maize. BMC Genet 2015;16:17. [PMID: 25888360 PMCID: PMC4377022 DOI: 10.1186/s12863-015-0176-1] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2014] [Accepted: 01/29/2015] [Indexed: 02/06/2023]  Open
28
Unterseer S, Bauer E, Haberer G, Seidel M, Knaak C, Ouzunova M, Meitinger T, Strom TM, Fries R, Pausch H, Bertani C, Davassi A, Mayer KF, Schön CC. A powerful tool for genome analysis in maize: development and evaluation of the high density 600 k SNP genotyping array. BMC Genomics 2014;15:823. [PMID: 25266061 PMCID: PMC4192734 DOI: 10.1186/1471-2164-15-823] [Citation(s) in RCA: 160] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2014] [Accepted: 09/23/2014] [Indexed: 02/07/2023]  Open
29
Fujino K, Obara M, Sato K. Diversification of the plant-specific hybrid glycine-rich protein (HyGRP) genes in cereals. FRONTIERS IN PLANT SCIENCE 2014;5:489. [PMID: 25309566 PMCID: PMC4174136 DOI: 10.3389/fpls.2014.00489] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2014] [Accepted: 09/03/2014] [Indexed: 05/20/2023]
30
Araneda L, Sim SC, Bae JJ, Chakraborty N, Curley J, Chang T, Inoue M, Warnke S, Jung G. Comparative genome analysis between Agrostis stolonifera and members of the Pooideae subfamily, including Brachypodium distachyon. PLoS One 2013;8:e79425. [PMID: 24244501 PMCID: PMC3823605 DOI: 10.1371/journal.pone.0079425] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2013] [Accepted: 09/24/2013] [Indexed: 11/19/2022]  Open
31
Fonsêca A, Pedrosa-Harand A. Karyotype stability in the genus Phaseolus evidenced by the comparative mapping of the wild species Phaseolus microcarpus. Genome 2013;56:335-43. [PMID: 23957673 DOI: 10.1139/gen-2013-0025] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
32
Higgins JE, Kosar-Hashemi B, Li Z, Howitt CA, Larroque O, Flanagan B, Morell MK, Rahman S. Characterization of starch phosphorylases in barley grains. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2013;93:2137-2145. [PMID: 23288583 DOI: 10.1002/jsfa.6019] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2012] [Revised: 11/13/2012] [Accepted: 11/28/2012] [Indexed: 06/01/2023]
33
Khlestkina EK. Genes determining the coloration of different organs in wheat. ACTA ACUST UNITED AC 2013. [DOI: 10.1134/s2079059713010085] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
34
Boutin SR, Young ND, Olson TC, Yu ZH, Vallejos CE, Shoemaker RC. Genome conservation among three legume genera detected with DNA markers. Genome 2012;38:928-37. [PMID: 18470218 DOI: 10.1139/g95-122] [Citation(s) in RCA: 80] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
35
Antonio BA, Inoue T, Kajiya H, Nagamura Y, Kurata N, Minobe Y, Yano M, Nakagahra M, Sasaki T. Comparison off genetic distance and order off DNA markers in five populations of rice. Genome 2012;39:946-56. [PMID: 18469946 DOI: 10.1139/g96-119] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
36
Deynze AE, Nelson JC, Sorrells ME, McCouch SR, Dubcovsky J, Dvorák J, Gill KS, Gill BS, Lagudah ES, Appels R. Molecular-genetic maps for group 1 chromosomes of Triticeae species and their relation to chromosomes in rice and oat. Genome 2012;38:45-59. [PMID: 18470151 DOI: 10.1139/g95-006] [Citation(s) in RCA: 205] [Impact Index Per Article: 17.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
37
Nelson JC, Deynze AE, Sorrells ME, Autrique E, Lu YH, Negre S, Bernard M, Leroy P. Molecular mapping of wheat. Homoeologous group 3. Genome 2012;38:525-33. [PMID: 18470186 DOI: 10.1139/g95-068] [Citation(s) in RCA: 141] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
38
Causse M, Santoni S, Damerval C, Maurice A, Charcosset A, Deatrick J, Vienne D. A composite map of expressed sequences in maize. Genome 2012;39:418-32. [PMID: 18469903 DOI: 10.1139/g96-053] [Citation(s) in RCA: 61] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
39
Nelson JC, Deynze AE, Sorrells ME, Autrique E, Lu YH, Merlino M, Atkinson M, Leroy P. Molecular mapping of wheat. Homoeologous group 2. Genome 2012;38:516-24. [PMID: 18470185 DOI: 10.1139/g95-067] [Citation(s) in RCA: 130] [Impact Index Per Article: 10.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
40
Marino CL, Tuleen NA, Hart GE, Nelson JC, Sorrells ME, Lu YH, Leroy P, Lopes CR. Molecular genetic maps of the group 6 chromosomes of hexaploid wheat (Triticum aestivum L. em. Thell.). Genome 2012;39:359-66. [PMID: 18469899 DOI: 10.1139/g96-046] [Citation(s) in RCA: 112] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
41
Copy number variations of 11 macronuclear chromosomes and their gene expression in Oxytricha trifallax. Gene 2012;505:75-80. [DOI: 10.1016/j.gene.2012.05.045] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/05/2012] [Revised: 03/25/2012] [Accepted: 05/21/2012] [Indexed: 01/17/2023]
42
Dickinson H, Costa L, Gutierrez-Marcos J. Epigenetic neofunctionalisation and regulatory gene evolution in grasses. TRENDS IN PLANT SCIENCE 2012;17:389-394. [PMID: 22575341 DOI: 10.1016/j.tplants.2012.04.002] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/26/2012] [Revised: 04/06/2012] [Accepted: 04/11/2012] [Indexed: 05/31/2023]
43
Rabbi IY, Kulembeka HP, Masumba E, Marri PR, Ferguson M. An EST-derived SNP and SSR genetic linkage map of cassava (Manihot esculenta Crantz). TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2012;125:329-42. [PMID: 22419105 DOI: 10.1007/s00122-012-1836-4] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/17/2011] [Accepted: 02/24/2012] [Indexed: 05/05/2023]
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Young ND, Bharti AK. Genome-enabled insights into legume biology. ANNUAL REVIEW OF PLANT BIOLOGY 2012;63:283-305. [PMID: 22404476 DOI: 10.1146/annurev-arplant-042110-103754] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
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Ying S, Zhang DF, Li HY, Liu YH, Shi YS, Song YC, Wang TY, Li Y. Cloning and characterization of a maize SnRK2 protein kinase gene confers enhanced salt tolerance in transgenic Arabidopsis. PLANT CELL REPORTS 2011;30:1683-99. [PMID: 21638061 DOI: 10.1007/s00299-011-1077-z] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/08/2011] [Revised: 03/22/2011] [Accepted: 04/19/2011] [Indexed: 05/11/2023]
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Li D, Cuevas HE, Yang L, Li Y, Garcia-Mas J, Zalapa J, Staub JE, Luan F, Reddy U, He X, Gong Z, Weng Y. Syntenic relationships between cucumber (Cucumis sativus L.) and melon (C. melo L.) chromosomes as revealed by comparative genetic mapping. BMC Genomics 2011;12:396. [PMID: 21816110 PMCID: PMC3199783 DOI: 10.1186/1471-2164-12-396] [Citation(s) in RCA: 44] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2011] [Accepted: 08/05/2011] [Indexed: 12/30/2022]  Open
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Pelgas B, Bousquet J, Meirmans PG, Ritland K, Isabel N. QTL mapping in white spruce: gene maps and genomic regions underlying adaptive traits across pedigrees, years and environments. BMC Genomics 2011;12:145. [PMID: 21392393 PMCID: PMC3068112 DOI: 10.1186/1471-2164-12-145] [Citation(s) in RCA: 74] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2010] [Accepted: 03/10/2011] [Indexed: 12/11/2022]  Open
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Lin YX, Jiang HY, Chu ZX, Tang XL, Zhu SW, Cheng BJ. Genome-wide identification, classification and analysis of heat shock transcription factor family in maize. BMC Genomics 2011;12:76. [PMID: 21272351 PMCID: PMC3039612 DOI: 10.1186/1471-2164-12-76] [Citation(s) in RCA: 153] [Impact Index Per Article: 11.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2010] [Accepted: 01/27/2011] [Indexed: 11/15/2022]  Open
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Woodhouse MR, Schnable JC, Pedersen BS, Lyons E, Lisch D, Subramaniam S, Freeling M. Following tetraploidy in maize, a short deletion mechanism removed genes preferentially from one of the two homologs. PLoS Biol 2010;8:e1000409. [PMID: 20613864 PMCID: PMC2893956 DOI: 10.1371/journal.pbio.1000409] [Citation(s) in RCA: 195] [Impact Index Per Article: 13.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2009] [Accepted: 05/20/2010] [Indexed: 12/02/2022]  Open
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Swigonova Z, Lai J, Ma J, Ramakrishna W, Llaca V, Bennetzen JL, Messing J. On the tetraploid origin of the maize genome. Comp Funct Genomics 2010;5:281-4. [PMID: 18629160 PMCID: PMC2447450 DOI: 10.1002/cfg.395] [Citation(s) in RCA: 39] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2004] [Revised: 01/29/2004] [Accepted: 02/03/2004] [Indexed: 11/06/2022]  Open
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