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Sun PP, Liu Y, Wang W, Song GJ, Ren YY. Regulation mechanism of magnetic field on pectinase and its preliminary application in postharvest sapodilla (Manilkara zapota). Food Chem 2023; 409:135300. [PMID: 36592602 DOI: 10.1016/j.foodchem.2022.135300] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2022] [Revised: 11/26/2022] [Accepted: 12/21/2022] [Indexed: 12/25/2022]
Abstract
In this study, regulation mechanism of magnetic field on pectinase was investigated and it was preliminarily applied in postharvest sapodilla. Results indicated pectinase activity decreased by 44 % when treated by magnetic field (3 mT, 0.5 h) with kinetic parameters Vmax/Km decreasing from 0.799 to 0.366 min. The optimal temperature (48 °C) and pH (4.8) of pectinase was not altered by magnetic field but Ca2+ at 0.05 mol/L strengthened its regulation effect. Ultraviolet and fluorescence spectra suggested tyrosine and tryptophan residues in treated pectinase became more hydrophobic while opposite in phenylalanine. CO, CNH, COO- groups in pectinase were also influenced, resulting in decreased β-sheet (from 53 % to 49 %), increased random coil (from 20 % to 22 %) and β-turn content (from 27 % to 29 %). More importantly, the firmness of treated sapodilla remained 45 % of maximum at 12 days' storage. Our findings provided new insights to illustrate the role of magnetic field in fruit preservation.
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Affiliation(s)
- Peng-Peng Sun
- College of Life Science, Yangtze University, Jingzhou, Hubei 434023, PR China; Institute of Food Science and Technology, Yangtze University, Jingzhou, Hubei 434023, PR China
| | - Ying Liu
- College of Life Science, Yangtze University, Jingzhou, Hubei 434023, PR China
| | - Wei Wang
- College of Life Science, Yangtze University, Jingzhou, Hubei 434023, PR China
| | - Guo-Jun Song
- College of Life Science, Yangtze University, Jingzhou, Hubei 434023, PR China
| | - Yuan-Yuan Ren
- College of Life Science, Yangtze University, Jingzhou, Hubei 434023, PR China; Institute of Food Science and Technology, Yangtze University, Jingzhou, Hubei 434023, PR China.
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Husin NA, Rahman S, Karunakaran R, Bhore SJ. Transcriptome analysis during fruit developmental stages in durian (Durio zibethinus Murr.) var. D24. Genet Mol Biol 2023; 45:e20210379. [PMID: 36622241 PMCID: PMC9830936 DOI: 10.1590/1678-4685-gmb-2021-0379] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2021] [Accepted: 10/18/2022] [Indexed: 01/10/2023] Open
Abstract
Durian (Durio zibethinus Murr.) fruits are famous for their unique aroma. This study analysed the Durian fruit transcriptome to discover the expression patterns of genes and to understand their regulation. Three developmental stages of Durian fruit, namely, early [90 days post-anthesis (DPA)], mature (120 DPA), and ripen (127 DPA), were studied. The Illumina HiSeq platform was used for sequencing. The sequence data were analysed using four different mapping aligners and statistical methods: CLC Genomic Workbench, HISAT2+DESeq2, Tophat+Cufflinks, and HISAT2+edgeR. The analyses showed that over 110 million clean reads were mapped to the Durian genome, yielding 19,976, 11,394, 17,833, and 24,351 differentially expressed genes during 90-127 days post-anthesis. Many identified differentially expressed genes were linked to the fruit ripening processes. The data analysis suggests that most genes with increased expression at the ripening stage were primarily involved in the metabolism of cofactors and vitamins, nucleotide metabolism, and carbohydrate metabolism. Significantly expressed genes from the young to mature stage were mainly associated with carbohydrate metabolism, amino acid metabolism, and cofactor and vitamin metabolism. The transcriptome data will serve as a foundation for understanding Durian fruit development-specific genes and could be helpful in fruit's trait improvement.
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Affiliation(s)
- Nurul Arneida Husin
- AIMST University, Faculty of Applied Sciences, Department of Biotechnology, Kedah, Malaysia.,Monash University Malaysia, Jeffrey Cheah School of Medicine and Health Sciences, Malaysia
| | - Sadequr Rahman
- Monash University Malaysia, School of Science and Tropical Medicine and Biology Platform, Malaysia.
| | - Rohini Karunakaran
- AIMST University, Faculty of Medicine, Unit of Biochemistry, Kedah, Malaysia.,Institute of Bioinformatics, Saveetha School of Engineering, Department of Computational Biology, Chennai, India
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Misran E, Idris A, Ya’akob H. Bromelain extraction using single stage nanofiltration membrane process. JOURNAL OF FOOD SCIENCE AND TECHNOLOGY 2023; 60:315-327. [PMID: 36618058 PMCID: PMC9813328 DOI: 10.1007/s13197-022-05618-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Revised: 09/03/2022] [Accepted: 10/02/2022] [Indexed: 11/16/2022]
Abstract
Pineapple (Ananas Comosus) is a tropical fruit having exceptional juiciness, vibrant tropical flavor and immense health benefits. Pineapples are not only taken fresh but they have been commercialized in the canning industry. Morris cultivar is mostly supplied to the canning industry where only the flesh is utilized and the rest of the pineapple (50 wt%) such as the core, stem, peels and crown are discarded as wastes. In the extraction of bromelain which is a vital proteolytic enzyme the whole pineapple including its peels, core, stem and crown can be utilized. This enzyme is very valuable and considered as a food supplement with a wide range of therapeutic benefits. Thus, in this study, bromelain is extracted from the flesh, crown, stem, core and peel of pineapples using simple one stage hollow fiber nanofiltration membrane process. The different parts of the pineapple were crushed to extract the juice. The juice was then centrifuged and the supernatant was then passed through a nanofiltration membrane. Results revealed the retentates from the different pineapple parts contain high amounts of bromelain in descending order flesh > peel > core > crown > stem. The amount of bromelain activity increased after every process especially after freeze drying.
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Affiliation(s)
- Effaliza Misran
- Centre for Environmental Sustainability and Water Security (IPASA), School of Chemical and Energy Engineering, Universiti Teknologi Malaysia, 81310 Johor Bahru, Johor Malaysia
| | - Ani Idris
- Centre for Environmental Sustainability and Water Security (IPASA), School of Chemical and Energy Engineering, Universiti Teknologi Malaysia, 81310 Johor Bahru, Johor Malaysia
| | - Harisun Ya’akob
- School of Chemical and Energy Engineering, Faculty of Engineering, Universiti Teknologi Malaysia, 81310 Johor Bahru, Johor Malaysia
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Yang Z, Duan X, Yang J, Wang H, Liu F, Xu X, Pan S. Effects of high hydrostatic pressure and thermal treatment on texture properties of pickled kohlrabi. Lebensm Wiss Technol 2022. [DOI: 10.1016/j.lwt.2022.113078] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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González-Gordo S, Palma JM, Corpas FJ. Peroxisomal Proteome Mining of Sweet Pepper ( Capsicum annuum L.) Fruit Ripening Through Whole Isobaric Tags for Relative and Absolute Quantitation Analysis. FRONTIERS IN PLANT SCIENCE 2022; 13:893376. [PMID: 35615143 PMCID: PMC9125320 DOI: 10.3389/fpls.2022.893376] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2022] [Accepted: 04/21/2022] [Indexed: 05/05/2023]
Abstract
Peroxisomes are ubiquitous organelles from eukaryotic cells characterized by an active nitro-oxidative metabolism. They have a relevant metabolic plasticity depending on the organism, tissue, developmental stage, or physiological/stress/environmental conditions. Our knowledge of peroxisomal metabolism from fruits is very limited but its proteome is even less known. Using sweet pepper (Capsicum annuum L.) fruits at two ripening stages (immature green and ripe red), it was analyzed the proteomic peroxisomal composition by quantitative isobaric tags for relative and absolute quantitation (iTRAQ)-based protein profiling. For this aim, it was accomplished a comparative analysis of the pepper fruit whole proteome obtained by iTRAQ versus the identified peroxisomal protein profile from Arabidopsis thaliana. This allowed identifying 57 peroxisomal proteins. Among these proteins, 49 were located in the peroxisomal matrix, 36 proteins had a peroxisomal targeting signal type 1 (PTS1), 8 had a PTS type 2, 5 lacked this type of peptide signal, and 8 proteins were associated with the membrane of this organelle. Furthermore, 34 proteins showed significant differences during the ripening of the fruits, 19 being overexpressed and 15 repressed. Based on previous biochemical studies using purified peroxisomes from pepper fruits, it could be said that some of the identified peroxisomal proteins were corroborated as part of the pepper fruit antioxidant metabolism (catalase, superoxide dismutase, ascorbate peroxidase, monodehydroascorbate reductase, dehydroascorbate reductaseglutathione reductase, 6-phosphogluconate dehydrogenase and NADP-isocitrate dehydrogenase), the β-oxidation pathway (acyl-coenzyme A oxidase, 3-hydroxyacyl-CoA dehydrogenase, enoyl-CoA hydratase), while other identified proteins could be considered "new" or "unexpected" in fruit peroxisomes like urate oxidase (UO), sulfite oxidase (SO), 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferase (METE1), 12-oxophytodienoate reductase 3 (OPR3) or 4-coumarate-CoA ligase (4CL), which participate in different metabolic pathways such as purine, sulfur, L-methionine, jasmonic acid (JA) or phenylpropanoid metabolisms. In summary, the present data provide new insights into the complex metabolic machinery of peroxisomes in fruit and open new windows of research into the peroxisomal functions during fruit ripening.
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Jukić Špika M, Dumičić G, Brkić Bubola K, Soldo B, Goreta Ban S, Vuletin Selak G, Ljubenkov I, Mandušić M, Žanić K. Modification of the Sensory Profile and Volatile Aroma Compounds of Tomato Fruits by the Scion × Rootstock Interactive Effect. FRONTIERS IN PLANT SCIENCE 2021; 11:616431. [PMID: 33552108 PMCID: PMC7855179 DOI: 10.3389/fpls.2020.616431] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/12/2020] [Accepted: 12/28/2020] [Indexed: 06/12/2023]
Abstract
Sensory quality is of increasing importance to consumer decisions in choosing a product, and it is certainly an important factor in repurchasing in terms of meeting the necessary aroma quality and taste properties. To better understand the effects of rootstocks and scions on fruit quality, the sensory profile and volatile aroma composition of the fruits of hydroponically grown tomato plants were evaluated. Experiments were established using the tomato cultivars Clarabella and Estatio as scions during two spring-summer seasons. In both experiments, the scion plants were self-grafted or grafted onto rootstocks of cultivars Arnold, Buffon, Emperador, and Maxifort, with the exception that in experiment 1, the Estatio scion was not grafted onto Buffon. The scions and rootstocks caused differences in observed sensory properties in both experiments. For most of the sensory traits, interaction effects between scion and rootstock were observed. Compared to those obtained from self-grafted Clarabella, the fruits obtained from Clarabella grafted onto Buffon in the first experiment and Clarabella grafted onto Arnold in the second experiment were sweeter by one measurement unit. The contents of seven aldehydes, six alcohols, five terpenes and two ketones were determined. A lower accumulation of total aldehydes, 22-45%, due to lower amounts of pentanal, (E)-2-heptanal and (E,E)-2,4-decadienal, was found in the fruits from plants where Estatio was rootstock compared with the other rootstocks treatments. Clarabella as a rootstock increased (Z)-3-hexenal + (E)-2-hexenal accumulation from 35 to 65%. Grafting Clarabella onto the tested rootstocks led to a change in the composition of volatile compounds, while differences between the combinations with Estatio as a scion were generally not recorded. Fruits from self-grafted Clarabella had higher (Z)-3-hexenal + (E)-2-hexenal concentrations than did fruits from Clarabella grafted onto Arnold (for 54%) and Emperador (for 68%), and in the second experiment, grafting onto all commercial rootstocks reduced (Z)-3-hexenal + (E)-2-hexenal concentrations, from 25 to 74%, compared to those from self-grafted Clarabella. Higher (+)-2-carene and (-)-caryophyllene oxide concentrations were attained in plants in which Clarabella was grafted onto Maxifort (by 56%) and plants in which Estatio was grafted onto Arnold (by 36%) compared to self-grafted plants. This study showed the possibility of altering the composition of volatile aroma compounds and sensory properties of tomato fruits by the use of grafting techniques.
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Affiliation(s)
- Maja Jukić Špika
- Department of Applied Sciences, Institute for Adriatic Crops and Karst Reclamation, Split, Croatia
- Centre of Excellence for Biodiversity and Molecular Plant Breeding, Zagreb, Croatia
| | - Gvozden Dumičić
- Department of Plant Sciences, Institute for Adriatic Crops and Karst Reclamation, Split, Croatia
| | - Karolina Brkić Bubola
- Department of Agriculture and Nutrition, Institute of Agriculture and Tourism, Poreč, Croatia
| | - Barbara Soldo
- Department of Chemistry, Faculty of Science, University of Split, Split, Croatia
| | - Smiljana Goreta Ban
- Centre of Excellence for Biodiversity and Molecular Plant Breeding, Zagreb, Croatia
- Department of Agriculture and Nutrition, Institute of Agriculture and Tourism, Poreč, Croatia
| | - Gabriela Vuletin Selak
- Department of Applied Sciences, Institute for Adriatic Crops and Karst Reclamation, Split, Croatia
- Centre of Excellence for Biodiversity and Molecular Plant Breeding, Zagreb, Croatia
| | - Ivica Ljubenkov
- Department of Chemistry, Faculty of Science, University of Split, Split, Croatia
| | - Marija Mandušić
- Department of Applied Sciences, Institute for Adriatic Crops and Karst Reclamation, Split, Croatia
| | - Katja Žanić
- Department of Applied Sciences, Institute for Adriatic Crops and Karst Reclamation, Split, Croatia
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Cell wall composition of alginate coated and pulsed light treated fresh-cut cantaloupes ( Cucumis melo L. Var. Reticulatus Cv. Glamour) during chilled storage. Journal of Food Science and Technology 2020; 57:2206-2221. [PMID: 32431347 DOI: 10.1007/s13197-020-04257-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Revised: 10/03/2019] [Accepted: 01/16/2020] [Indexed: 10/25/2022]
Abstract
This study was to investigate the effects of optimised alginate coating combined with repetitive pulsed light (RPL) on cell wall composition of fresh-cut cantaloupes during chilled storage. Fresh-cut cantaloupes were coated with alginate (1.86%, w/v) followed by RPL treatment (0.9 J cm-2 at every 48 h up to 26 days) during storage of 36 days. Cell wall composition of fresh-cut cantaloupes was determined at every 12 days while microscopic analysis was conducted on day 2 and day 36. Alginate was effective in maintaining high pectin fractions of fresh-cut cantaloupes while RPL showed greater contribution in maintaining hemicellulose fraction. However, the combination of alginate and RPL was the most effective treatment to maintain the overall cell wall fractions that contributed to the cell wall integrity of fresh-cut cantaloupes during storage. The alginate + RPL samples also had the greatest cell turgidity and shape with well-defined cell walls at the end of storage.
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Edible Coating Based on Roselle (Hibiscus sabdariffa L.) Mucilage Applied to Soursop Fruits in Postharvest Storage. J FOOD QUALITY 2020. [DOI: 10.1155/2020/4326840] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The soursop fruit (Annona muricata L.) is a crop of significant economic value for Nayarit, which is characterized by having a bittersweet taste, making it attractive to the consumer. However, the soursop has rapid maturation which causes a short shelf life. Several postharvest management techniques have been applied to reduce its metabolic processes, such as refrigeration, use of 1-methylcyclopropene (1-MCP), and controlled and modified atmospheres. In recent years, polysaccharide-based coatings have been applied to fruits. Therefore, the objective of this investigation was to evaluate the physicochemical and biochemical changes, as well as the antioxidant activity of soursop fruits with a mucilage-based coating (2%), stored at 22°C and 15°C with a 90% RH. Weight loss, firmness, color, soluble solids, acidity, pH, phenols, flavonoids, vitamin C, and antioxidant activity were evaluated. The results obtained in the coated fruits stored at 15°C showed lower weight loss (6.4%), lower firmness (29.7 N), higher TSS concentration (10.4°Bx), and lower acidity (0.38%) compared with the uncoated fruits. The total phenolic content decreased in coated fruits stored at 22°C (54.3 mg EGA/100 g FW). The highest antioxidant activity (DPPH method) was recorded in fruits coated and stored at 15°C with an average value of 257.9 mg EAA/100 g FW. Moreover, a high concentration of vitamin C was observed in fruits coated and stored at 15°C and 22°C (20.5 and 17.5 mg EAA/100 g FW), concluding that the coating based on roselle mucilage (2%) in combination with a temperature of 15°C prevents weight loss, decreases titratable acidity, and increases the content of phenols and vitamin C. Furthermore, an increase in the shelf life up to eight days and in the antioxidant activity at the maturity of consumption was observed in the fruits coated with 2% roselle mucilage stored at 15°C.
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Hybrid Label-Free Molecular Microscopies for Simultaneous Visualization of Changes in Cell Wall Polysaccharides of Peach at Single- and Multiple-Cell Levels during Postharvest Storage. Cells 2020; 9:cells9030761. [PMID: 32244921 PMCID: PMC7140658 DOI: 10.3390/cells9030761] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2020] [Revised: 03/11/2020] [Accepted: 03/18/2020] [Indexed: 12/26/2022] Open
Abstract
Softening of fruit during the postharvest storage, which is mainly associated with both compositional and spatial changes of polysaccharides within cell wall, affects the texture and quality of fruit. Current research on the fruit softening mechanism lacks an understanding of the overall softening at the cell level. The objective of this work was to investigate the change in the spatial distribution of cell wall polysaccharides in peach flesh cells at both single- and multiple-cell levels in a label-free way during the postharvest storage. Nonmelting peaches (Prunus persica L. Batsch cv."Zhonghuashoutao") at commercial maturity were stored at 0 °C and 20 °C. Firmness measurement and chemical analysis were performed at each storage time. In addition, three molecular imaging techniques, namely confocal Raman microspectroscopy (CRM), Fourier transform infrared microspectroscopy (FTIRM), and stimulated Raman scattering microscopy (SRS) were used to visualize changes in the spatial distribution of cell wall polysaccharides of peach fruit in a label-free way during the postharvest storage. The combination of CRM and FTIRM provided complementary spectral information to visualize the spatial changes of cellulose, hemicellulose, and pectin in the cell wall of peach flesh during softening at the single-cell level, and found that the cell wall polysaccharides tended to be concentrated in the cell corner of parenchymal cells at the late stage. Furthermore, SRS, which is an ultrafast Raman imaging technique (approximately three or four orders of magnitude faster than CRM), was used for high-throughput cell wall phenotypes measurement. Different degradation degrees of parenchymal cells during fruit softening were found based on the gray-scale statistical analysis of SRS data. In general, cell wall polysaccharides decreased during softening and tended to be concentrated in the cell corner for most parenchymal cells at the late stage, but there were also some cells not in line with the whole softening trends. The results show that there were differences in the content and spatial changes of cell wall polysaccharides among parenchymal cells of peach fruit during the softening process, and the hybrid use of CRM, FTIRM, and SRS is a promising method for simultaneous visualization of changes in cell wall polysaccharides of peach.
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Jiang B, Ou S, Xu L, Mai W, Ye M, Gu H, Zhang T, Yuan C, Shen C, Wang J, Liu K. Comparative proteomic analysis provides novel insights into the regulation mechanism underlying papaya (Carica papaya L.) exocarp during fruit ripening process. BMC PLANT BIOLOGY 2019; 19:238. [PMID: 31170911 PMCID: PMC6554998 DOI: 10.1186/s12870-019-1845-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/18/2018] [Accepted: 05/22/2019] [Indexed: 06/09/2023]
Abstract
BACKGROUND Papaya (Carica papaya L.) is a popular climacteric fruit, undergoing various physico-chemical changes during ripening. Although papaya is widely cultivated and consumed, few studies on the changes in metabolism during its ripening process at the proteasome level have been performed. Using a newly developed TMT-LCMS analysis, proteomes of papaya fruit at different ripening stages were investigated. RESULTS In total, 3220 proteins were identified, of which 2818 proteins were quantified. The differential accumulated proteins (DAPs) exhibited various biological functions and diverse subcellular localizations. The KEGG enrichment analysis showed that various metabolic pathways were significantly altered, particularly in flavonoid and fatty acid metabolisms. The up-regulation of several flavonoid biosynthesis-related proteins may provide more raw materials for pigment biosynthesis, accelerating the color variation of papaya fruit. Variations in the fatty acid metabolism- and cell wall degradation-related proteins were investigated during the ripening process. Furthermore, the contents of several important fatty acids were determined, and increased unsaturated fatty acids may be associated with papaya fruit volatile formation. CONCLUSIONS Our data may give an intrinsic explanation of the variations in metabolism during the ripening process of papaya fruit.
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Affiliation(s)
- Bian Jiang
- Life Science and Technology School, Lingnan Normal University, Zhanjiang, 524048 China
| | - Siyan Ou
- Root Biology Center, College of Natural Resources and Environment, South China Agricultural University, Guangzhou, 510642 China
| | - Ling Xu
- Life Science and Technology School, Lingnan Normal University, Zhanjiang, 524048 China
| | - Wanyi Mai
- Life Science and Technology School, Lingnan Normal University, Zhanjiang, 524048 China
| | - Meijun Ye
- Life Science and Technology School, Lingnan Normal University, Zhanjiang, 524048 China
| | - Haiping Gu
- Life Science and Technology School, Lingnan Normal University, Zhanjiang, 524048 China
| | - Tao Zhang
- Life Science and Technology School, Lingnan Normal University, Zhanjiang, 524048 China
| | - Changchun Yuan
- Life Science and Technology School, Lingnan Normal University, Zhanjiang, 524048 China
| | - Chenjia Shen
- College of Life and Environmental Sciences, Hangzhou Normal University, Hangzhou, 310036 China
| | - Jinxiang Wang
- Root Biology Center, College of Natural Resources and Environment, South China Agricultural University, Guangzhou, 510642 China
| | - Kaidong Liu
- Life Science and Technology School, Lingnan Normal University, Zhanjiang, 524048 China
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A fruit firmness QTL identified on linkage group 4 in sweet cherry (Prunus avium L.) is associated with domesticated and bred germplasm. Sci Rep 2019; 9:5008. [PMID: 30899090 PMCID: PMC6428808 DOI: 10.1038/s41598-019-41484-8] [Citation(s) in RCA: 20] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/15/2018] [Accepted: 03/08/2019] [Indexed: 11/23/2022] Open
Abstract
Fruit firmness is an important market driven trait in sweet cherry (Prunus avium L.) where the desirable increase in fruit firmness is associated with landrace and bred cultivars. The aim of this work was to investigate the genetic basis of fruit firmness using plant materials that include wild cherry (syn. mazzard), landrace and bred sweet cherry germplasm. A major QTL for fruit firmness, named qP-FF4.1, that had not previously been reported, was identified in three sweet cherry populations. Thirteen haplotypes (alleles) associated with either soft or firm fruit were identified for qP-FF4.1 in the sweet cherry germplasm, and the “soft” alleles were dominant over the “firm” alleles. The finding that sweet cherry individuals that are homozygous for the “soft” alleles for qP-FF4.1 are exclusively mazzards and that the vast majority of the bred cultivars are homozygous for “firm” alleles suggests that this locus is a signature of selection. Candidate genes related to plant cell wall modification and various plant hormone signaling pathways were identified, with an expansin gene being the most promising candidate. These results advance our understanding of the genetic basis of fruit firmness and will help to enable the use of DNA informed breeding for this trait in sweet cherry breeding programs.
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Talaverano I, Ubeda C, Cáceres-Mella A, Valdés ME, Pastenes C, Peña-Neira Á. Water stress and ripeness effects on the volatile composition of Cabernet Sauvignon wines. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2018; 98:1140-1152. [PMID: 28758679 DOI: 10.1002/jsfa.8565] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/17/2017] [Revised: 07/07/2017] [Accepted: 07/15/2017] [Indexed: 05/25/2023]
Abstract
BACKGROUND Controlled water deficits affect grape berry physiology and the resulting wines, with volatile composition being the one of the affected parameters. However, there is a potential disconnect between aromatic maturity and sugar accumulation. Accordingly, the effects of three different water status levels over two growing seasons (2014 and 2015) and two different harvest dates on the aroma compounds from Cabernet Sauvignon wines were studied. Volatile compounds were determined using headspace solid phase microextraction coupled with gas chromatoghraphy/mass spectrometry. RESULTS Around 45 volatile compounds were determined in the wines and, among these, esters were affected the most, presenting lower concentrations when the most restrictive water treatment was applied in both years. By contrast, volatile acids presented the highest concentrations when the lowest level of irrigation was applied. On the other hand, a delay in harvesting produced an increase in the total amount of volatile compounds in samples from the most restrictive water treatment. These results are coincident with a principal component analysis that indicated a great separation between years, deficit irrigation treatments and harvest dates. CONCLUSION The results of the present study suggest that a low water supply had a negative effect on the aromatic potential of wines at a similar ripening stage. However, this effect could be countered by harvesting at a later date. © 2017 Society of Chemical Industry.
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Affiliation(s)
- Inmaculada Talaverano
- Instituto de Ciencias Biomédicas, Facultad de Ciencias de la Salud, Universidad Autónoma de Chile, Chile
| | - Cristina Ubeda
- Instituto de Ciencias Biomédicas, Facultad de Ciencias de la Salud, Universidad Autónoma de Chile, Chile
| | | | - María Esperanza Valdés
- Instituto de Ciencias Biomédicas, Facultad de Ciencias de la Salud, Universidad Autónoma de Chile, Chile
| | - Claudio Pastenes
- Universidad de Chile, Facultad de Ciencias Agronómicas, Departamento de Producción Agrícola, La Pintana, Santiago, Chile
| | - Álvaro Peña-Neira
- Departamento de Agroindustria y Enología, Facultad de Ciencias Agronómicas, Universidad de Chile, Santiago, Chile
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Saminathan T, García M, Ghimire B, Lopez C, Bodunrin A, Nimmakayala P, Abburi VL, Levi A, Balagurusamy N, Reddy UK. Metagenomic and Metatranscriptomic Analyses of Diverse Watermelon Cultivars Reveal the Role of Fruit Associated Microbiome in Carbohydrate Metabolism and Ripening of Mature Fruits. FRONTIERS IN PLANT SCIENCE 2018; 9:4. [PMID: 29403516 PMCID: PMC5780703 DOI: 10.3389/fpls.2018.00004] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/13/2017] [Accepted: 01/03/2018] [Indexed: 05/06/2023]
Abstract
The plant microbiome is a key determinant of plant health and productivity, and changes in the plant microbiome can alter the tolerance to biotic and abiotic stresses and the quality of end produce. Little is known about the microbial diversity and its effect on carbohydrate metabolism in ripe fruits. In this study, we aimed to understand the diversity and function of microorganisms in relation to carbohydrate metabolism of ripe watermelon fruits. We used 16S metagenomics and RNAseq metatranscriptomics for analysis of red (PI459074, Congo, and SDRose) and yellow fruit-flesh cultivars (PI227202, PI435990, and JBush) of geographically and metabolically diverse watermelon cultivars. Metagenomics data showed that Proteobacteria were abundant in SDRose and PI227202, whereas Cyanobacteria were most abundant in Congo and PI4559074. In the case of metatranscriptome data, Proteobacteria was the most abundant in all cultivars. High expression of genes linked to infectious diseases and the expression of peptidoglycan hydrolases associated to pathogenicity of eukaryotic hosts was observed in SDRose, which could have resulted in low microbial diversity in this cultivar. The presence of GH28, associated with polygalacturonase activity in JBush and SDRose could be related to cell wall modifications including de-esterification and depolymerization, and consequent loss of galacturonic acid and neutral sugars. Moreover, based on the KEGG annotation of the expressed genes, nine α-galactosidase genes involved in key processes of galactosyl oligosaccharide metabolism, such as raffinose family were identified and galactose metabolism pathway was reconstructed. Results of this study underline the links between the host and fruit-associated microbiome in carbohydrate metabolism of the ripe fruits. The cultivar difference in watermelon reflects the quantum and diversity of the microbiome, which would benefit watermelon and other plant breeders aiming at the holobiont concept to incorporate associated microbiomes in breeding programs.
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Affiliation(s)
- Thangasamy Saminathan
- Gus R. Douglass Institute and Department of Biology, West Virginia State University, Institute, WV, United States
| | - Marleny García
- Laboratorio de Biorremediación, Facultad de Ciencias Biológicas, Universidad Autónoma de Coahuila, Torreón, Mexico
| | - Bandana Ghimire
- Gus R. Douglass Institute and Department of Biology, West Virginia State University, Institute, WV, United States
| | - Carlos Lopez
- Gus R. Douglass Institute and Department of Biology, West Virginia State University, Institute, WV, United States
- Laboratorio de Biorremediación, Facultad de Ciencias Biológicas, Universidad Autónoma de Coahuila, Torreón, Mexico
| | - Abiodun Bodunrin
- Gus R. Douglass Institute and Department of Biology, West Virginia State University, Institute, WV, United States
| | - Padma Nimmakayala
- Gus R. Douglass Institute and Department of Biology, West Virginia State University, Institute, WV, United States
| | - Venkata L. Abburi
- Gus R. Douglass Institute and Department of Biology, West Virginia State University, Institute, WV, United States
| | - Amnon Levi
- U.S. Vegetable Laboratory, Agricultural Research Service, United States Department of Agriculture, Charleston, SC, United States
| | - Nagamani Balagurusamy
- Laboratorio de Biorremediación, Facultad de Ciencias Biológicas, Universidad Autónoma de Coahuila, Torreón, Mexico
| | - Umesh K. Reddy
- Gus R. Douglass Institute and Department of Biology, West Virginia State University, Institute, WV, United States
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Ciacciulli A, Chiozzotto R, Attanasio G, Cirilli M, Bassi D. Identification of a melting type variant among peach (P. persica L. Batsch) fruit textures by a digital penetrometer. J Texture Stud 2017; 49:370-377. [PMID: 29266307 DOI: 10.1111/jtxs.12317] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2017] [Revised: 11/15/2017] [Accepted: 12/15/2017] [Indexed: 01/08/2023]
Abstract
The increase of peach (Prunus persica L. Batsch) fruit shelf-life is one of the most important objectives of breeding activities, as peach is a highly perishable fruit which undergoes rapid softening during ripening. The loss of fruit firmness is accompanied by a modification of textural properties. At least four distinct textures were described in peach: melting, non-melting, stony-hard, and slow-melting (better defined as "slow-softening"). Flesh textures are usually discriminated using different approaches, specific for each type. Objective of this work was the development of a reliable method to assess flesh texture variants in peach fruit, with special attention to the slow-softening type which is currently scored by sensorial evaluation. A puncture-based test using a digital penetrometer was performed on 20 accessions belonging to the four textural groups, obtaining a series of rheological measures related to mechanical flesh properties and including Young's Modulus, Upper Yield Point, and Slope of Yield Stress. Among the components of elasto-plastic behavior of the fruits, the texture dynamic index (TD) was shown to be a reliable parameter to distinguish the group of melting flesh texture from slow-softening, non-melting, and stony-hard, these last resulting characterized by similar mechanical properties. The TD index can be applied to discriminate slow-softening and melting fruits, although variability within the different texture groups suggests the existence of accessions with intermediate phenotypes and minor quantitative trait variation. The availability of an objective method to clearly distinguish the melting from the slow-softening phenotypes paves the road to phenotype segregating progenies in order to find molecular markers associated to the slow-softening trait. PRACTICAL APPLICATIONS The TD index could be considered to determine different textures in fleshy fruits in preharvest and postharvest, to support evaluation of quality for the intended use.
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Affiliation(s)
- Angelo Ciacciulli
- Department of Agricultural and Environmental Sciences, University of Milan, Milan, Italy
| | - Remo Chiozzotto
- Department of Agricultural and Environmental Sciences, University of Milan, Milan, Italy
| | - Giovanna Attanasio
- Department of Agricultural and Environmental Sciences, University of Milan, Milan, Italy
| | - Marco Cirilli
- Department of Agricultural and Environmental Sciences, University of Milan, Milan, Italy
| | - Daniele Bassi
- Department of Agricultural and Environmental Sciences, University of Milan, Milan, Italy
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Oglesby L, Ananga A, Obuya J, Ochieng J, Cebert E, Tsolova V. Anthocyanin Accumulation in Muscadine Berry Skins Is Influenced by the Expression of the MYB Transcription Factors, MybA1, and MYBCS1. Antioxidants (Basel) 2016; 5:E35. [PMID: 27754335 PMCID: PMC5187533 DOI: 10.3390/antiox5040035] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/16/2016] [Revised: 08/13/2016] [Accepted: 09/18/2016] [Indexed: 12/22/2022] Open
Abstract
The skin color of grape berry is very important in the wine industry. The red color results from the synthesis and accumulation of anthocyanins, which is regulated by transcription factors belonging to the MYB family. The transcription factors that activate the anthocyanin biosynthetic genes have been isolated in model plants. However, the genetic basis of color variation is species-specific and its understanding is relevant in many crop species. This study reports the isolation of MybA1, and MYBCS-1 genes from muscadine grapes for the first time. They are designated as VrMybA1 (GenBank Accession No. KJ513437), and VrMYBCS1 (VrMYB5a) (GenBank Accession No. KJ513438). The findings in this study indicate that, the deduced VrMybA1 and VrMYBCS1 protein structures share extensive sequence similarity with previously characterized plant MYBs, while phylogenetic analysis confirms that they are members of the plant MYB super-family. The expressions of MybA1, and MYBCS1 (VrMYB5a) gene sequences were investigated by quantitative real-time PCR using in vitro cell cultures, and berry skin samples at different developmental stages. Results showed that MybA1, and MYBCS1 genes were up-regulated in the veràison and physiologically mature red berry skins during fruit development, as well as in in vitro red cell cultures. This study also found that in ripening berries, the transcription of VrMybA1, and VrMYBCS1 in the berry skin was positively correlated with anthocyanin accumulation. Therefore, the upregulation of VrMybA1, and VrMYBCS1 results in the accumulation and regulation of anthocyanin biosynthesis in berry development of muscadine grapes. This work greatly enhances the understanding of anthocyanin biosynthesis in muscadine grapes and will facilitate future genetic modification of the antioxidants in V. rotundifolia.
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Affiliation(s)
- Lillian Oglesby
- Center for Viticulture and Small Fruit Research, College of Agriculture and Food Science, Florida A & M University, 6505 Mahan Drive, Tallahassee, FL 32317, USA.
| | - Anthony Ananga
- Center for Viticulture and Small Fruit Research, College of Agriculture and Food Science, Florida A & M University, 6505 Mahan Drive, Tallahassee, FL 32317, USA.
- Food Science Program, College of Agriculture and Food Sciences, Florida A & M University, Tallahassee, FL 32307, USA.
| | - James Obuya
- Center for Viticulture and Small Fruit Research, College of Agriculture and Food Science, Florida A & M University, 6505 Mahan Drive, Tallahassee, FL 32317, USA.
| | - Joel Ochieng
- Faculties of Agriculture and Veterinary Medicine, University of Nairobi, P.O. Box 29053, Nairobi 00625, Kenya.
| | - Ernst Cebert
- Department of Biological and Environmental Sciences, Alabama A & M University, 4900 Meridian Street, Normal, AL 35762, USA.
| | - Violeta Tsolova
- Center for Viticulture and Small Fruit Research, College of Agriculture and Food Science, Florida A & M University, 6505 Mahan Drive, Tallahassee, FL 32317, USA.
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16
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Guo S, Sun H, Zhang H, Liu J, Ren Y, Gong G, Jiao C, Zheng Y, Yang W, Fei Z, Xu Y. Comparative Transcriptome Analysis of Cultivated and Wild Watermelon during Fruit Development. PLoS One 2015; 10:e0130267. [PMID: 26079257 PMCID: PMC4469606 DOI: 10.1371/journal.pone.0130267] [Citation(s) in RCA: 66] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/28/2015] [Accepted: 05/19/2015] [Indexed: 11/23/2022] Open
Abstract
Watermelon [Citrullus lanatus (Thunb.) Matsum. & Nakai] is an important vegetable crop world-wide. Watermelon fruit quality is a complex trait determined by various factors such as sugar content, flesh color and flesh texture. Fruit quality and developmental process of cultivated and wild watermelon are highly different. To systematically understand the molecular basis of these differences, we compared transcriptome profiles of fruit tissues of cultivated watermelon 97103 and wild watermelon PI296341-FR. We identified 2,452, 826 and 322 differentially expressed genes in cultivated flesh, cultivated mesocarp and wild flesh, respectively, during fruit development. Gene ontology enrichment analysis of these genes indicated that biological processes and metabolic pathways related to fruit quality such as sweetness and flavor were significantly changed only in the flesh of 97103 during fruit development, while those related to abiotic stress response were changed mainly in the flesh of PI296341-FR. Our comparative transcriptome profiling analysis identified critical genes potentially involved in controlling fruit quality traits including α-galactosidase, invertase, UDP-galactose/glucose pyrophosphorylase and sugar transporter genes involved in the determination of fruit sugar content, phytoene synthase, β-carotene hydroxylase, 9-cis-epoxycarotenoid dioxygenase and carotenoid cleavage dioxygenase genes involved in carotenoid metabolism, and 4-coumarate:coenzyme A ligase, cellulose synthase, pectinesterase, pectinesterase inhibitor, polygalacturonase inhibitor and α-mannosidase genes involved in the regulation of flesh texture. In addition, we found that genes in the ethylene biosynthesis and signaling pathway including ACC oxidase, ethylene receptor and ethylene responsive factor showed highly ripening-associated expression patterns, indicating a possible role of ethylene in fruit development and ripening of watermelon, a non-climacteric fruit. Our analysis provides novel insights into watermelon fruit quality and ripening biology. Furthermore, the comparative expression profile data we developed provides a valuable resource to accelerate functional studies in watermelon and facilitate watermelon crop improvement.
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Affiliation(s)
- Shaogui Guo
- Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, Department of Vegetable Science, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), National Engineering Research Center for Vegetables, Beijing, China
| | - Honghe Sun
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), National Engineering Research Center for Vegetables, Beijing, China
- Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, NY, United States of America
| | - Haiying Zhang
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), National Engineering Research Center for Vegetables, Beijing, China
| | - Jingan Liu
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), National Engineering Research Center for Vegetables, Beijing, China
| | - Yi Ren
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), National Engineering Research Center for Vegetables, Beijing, China
| | - Guoyi Gong
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), National Engineering Research Center for Vegetables, Beijing, China
| | - Chen Jiao
- Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, NY, United States of America
| | - Yi Zheng
- Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, NY, United States of America
| | - Wencai Yang
- Beijing Key Laboratory of Growth and Developmental Regulation for Protected Vegetable Crops, Department of Vegetable Science, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China
| | - Zhangjun Fei
- Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, NY, United States of America
- USDA Robert W. Holley Center for Agriculture and Health, Ithaca, NY, United States of America
| | - Yong Xu
- Key Laboratory of Biology and Genetic Improvement of Horticultural Crops (North China), National Engineering Research Center for Vegetables, Beijing, China
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17
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Trad M, Ginies C, Gaaliche B, Renard CMGC, Mars M. Relationship between pollination and cell wall properties in common fig fruit. PHYTOCHEMISTRY 2014; 98:78-84. [PMID: 24393459 DOI: 10.1016/j.phytochem.2013.12.011] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2013] [Revised: 12/08/2013] [Accepted: 12/12/2013] [Indexed: 06/03/2023]
Abstract
Most botanical types in fig Ficus carica require pollination to fulfil their development and ensure quality onset of the fruit. Cell wall behaviour and composition was followed in fig fruit in response to pollination during maturity. Figs, when ripe, soften drastically and lose of their firmness and cell wall cohesion. Pollination increased peel thickness, flesh thickness, fresh weight and dry matter content of the fruit. Alcohol insoluble solids (AIS), more concentrated in the flesh tissue, were not influenced by the lack of pollination. Concentrations in uronic acids were higher in the AIS of the peel than that of the flesh and differences were significant between pollinated and non-pollinated fruits. Pectin polymers in figs were high methylated (DM>50). The methylation degree (DM) increased more with pollination affecting textural properties of the fig receptacle. The major neutral sugars from the AIS were glucose (Glc) from cellulose followed by arabinose (Ara). No significant changes in neutral sugars content could be allocated to pollination. Pollination is essential in fruit enlargement and softening. Minor changes were determined in the cell wall composition of the fruit at maturity. Fertile seeds resulting from pollination may possibly take place in hormonal activity stimulating many related enzymes of the wall matrix depolymerisation in particular polygalacturonase (PG) and pectin methylesterase (PME).
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Affiliation(s)
- Mehdi Trad
- UR Agrobiodiversity, High Agronomic Institute, IRESA-University of Sousse, 4042 Chott-Mariem, Tunisia.
| | - Christian Ginies
- INRA, Université d'Avignon et des Pays du Vaucluse, UMR408 SQPOV, F-84000 Avignon, France
| | - Badii Gaaliche
- UR Agrobiodiversity, High Agronomic Institute, IRESA-University of Sousse, 4042 Chott-Mariem, Tunisia
| | - Catherine M G C Renard
- INRA, Université d'Avignon et des Pays du Vaucluse, UMR408 SQPOV, F-84000 Avignon, France
| | - Messaoud Mars
- UR Agrobiodiversity, High Agronomic Institute, IRESA-University of Sousse, 4042 Chott-Mariem, Tunisia
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18
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Sagar M, Chervin C, Roustan JP, Bouzayen M, Zouine M. Under-expression of the Auxin Response Factor Sl-ARF4 improves postharvest behavior of tomato fruits. PLANT SIGNALING & BEHAVIOR 2013; 8:doi: 10.4161/psb.25647. [PMID: 23857361 PMCID: PMC4091072 DOI: 10.4161/psb.25647] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Auxin is one of the most prominent phytohormones regulating many aspects of fleshy fruit development including fruit set, fruit size through the control of cell division and cell expansion, and fruit ripening. To shed light on the role of auxin fruit ripening, we have previously shown that Sl-ARF4 is a major player in mediating the auxin control of sugar metabolism in tomato fruit (cv MicroTom). Further extending this study, we show here that down-regulation of Sl-ARF4 in tomato alters some ripening-related fruit quality traits including enhanced fruit density at mature stage, increased firmness, prolonged shelf-life and reduced water (weight) loss at red ripe stage. These findings suggest that Sl-ARF4 plays a role in determining fruit cell wall architecture and thus providing a potential genetic marker for improving post-harvest handling and shelf life of tomato fruits.
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Affiliation(s)
- Maha Sagar
- University of Toulouse; INPT; Laboratory of Genomics and Biotechnology of Fruit; Castanet-Tolosan, France
- INRA; UMR990 Génomique et Biotechnologie des Fruits; Chemin de Borde Rouge; Castanet-Tolosan, France
| | - Christian Chervin
- University of Toulouse; INPT; Laboratory of Genomics and Biotechnology of Fruit; Castanet-Tolosan, France
- INRA; UMR990 Génomique et Biotechnologie des Fruits; Chemin de Borde Rouge; Castanet-Tolosan, France
| | - Jean-Paul Roustan
- University of Toulouse; INPT; Laboratory of Genomics and Biotechnology of Fruit; Castanet-Tolosan, France
- INRA; UMR990 Génomique et Biotechnologie des Fruits; Chemin de Borde Rouge; Castanet-Tolosan, France
| | - Mondher Bouzayen
- University of Toulouse; INPT; Laboratory of Genomics and Biotechnology of Fruit; Castanet-Tolosan, France
- INRA; UMR990 Génomique et Biotechnologie des Fruits; Chemin de Borde Rouge; Castanet-Tolosan, France
- Correspondence to: Mondher Bouzayen, and Mohamed Zouine,
| | - Mohamed Zouine
- University of Toulouse; INPT; Laboratory of Genomics and Biotechnology of Fruit; Castanet-Tolosan, France
- INRA; UMR990 Génomique et Biotechnologie des Fruits; Chemin de Borde Rouge; Castanet-Tolosan, France
- Correspondence to: Mondher Bouzayen, and Mohamed Zouine,
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19
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Frenkel C, Hartman TG. Decrease in fruit moisture content heralds and might launch the onset of ripening processes. J Food Sci 2013; 77:S365-76. [PMID: 23061891 DOI: 10.1111/j.1750-3841.2012.02910.x] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
UNLABELLED It is known that fruit ripening is a genetically programmed event but it is not entirely clear what metabolic cue(s) stimulate the onset of ripening, ethylene action notwithstanding. Here, we examined the conjecture that fruit ripening might be evoked by an autonomously induced decrease in tissue water status. We found decline in water content occurring at the onset of ripening in climacteric and nonclimacteric fruit, suggesting that this phenomenon might be universal. This decline in water content persisted throughout the ripening process in some fruit, whereas in others it reversed during the progression of the ripening process. Applied ethylene also induced a decrease in water content in potato (Solanum tuberosum) tubers. In ethylene-mutant tomato (Solanum lycopersicum) fruit (antisense to1-aminocyclopropane carboxylate synthase), cold-induced decline in water content stimulated onset of ripening processes apparently independently of ethylene action, suggesting cause-and-effect relationship between decreasing water content and onset of ripening. The decline in tissue water content, occurring naturally or induced by ethylene, was strongly correlated with a decrease in hydration (swelling) efficacy of cell wall preparations suggesting that hydration dynamics of cell walls might account for changes in tissue moisture content. Extent of cell wall swelling was, in turn, related to the degree of oxidative cross-linking of wall-bound phenolic acids, suggesting that oxidant-induced wall restructuring might mediate cell wall and, thus, fruit tissue hydration status. We propose that oxidant-induced cell wall remodeling and consequent wall dehydration might evoke stress signaling for the onset of ripening processes. PRACTICAL APPLICATION This study suggests that decline in fruit water content is an early event in fruit ripening. This information may be used to gauge fruit maturity for appropriate harvest date and for processing. Control of fruit hydration state might be used to regulate the onset of fruit ripening.
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Affiliation(s)
- Chaim Frenkel
- Department of Plant Biology and Pathology, Rutgers-the State University of New Jersey, New Brunswick, NJ 08901, USA.
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20
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Hemicellulose fine structure is affected differently during ripening of tomato lines with contrasted texture. Int J Biol Macromol 2012; 51:462-70. [DOI: 10.1016/j.ijbiomac.2012.05.024] [Citation(s) in RCA: 29] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2012] [Revised: 05/15/2012] [Accepted: 05/18/2012] [Indexed: 11/20/2022]
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21
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van der Sman RGM, Sanders M. Prediction of postharvest firmness of apple using biological switch model. J Theor Biol 2012; 310:239-48. [PMID: 22771901 DOI: 10.1016/j.jtbi.2012.06.037] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2011] [Revised: 06/10/2012] [Accepted: 06/27/2012] [Indexed: 02/07/2023]
Abstract
In this paper we present a model that predicts the softening of apple during ripening in the postharvest phase. Apple ripening starts with an autocatalytic production of ethylene, which triggers a multitude of biochemical processes like the degradation of cell wall material. This triggering of the ripening process has been modelled as a biological switch-using the activator-depleted substrate model, which is proposed earlier by Meinhardt in the field of developmental biology. The model has been calibrated using storage experiments using various apple cultivars. Furthermore, the model is proven to be valid using independent experimental data of Elstar apple under dynamic storage conditions.
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Affiliation(s)
- R G M van der Sman
- Agrotechnology and Food Sciences, Wageningen University, The Netherlands.
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22
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Fragkostefanakis S, Dandachi F, Kalaitzis P. Expression of arabinogalactan proteins during tomato fruit ripening and in response to mechanical wounding, hypoxia and anoxia. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2012; 52:112-8. [PMID: 22305074 DOI: 10.1016/j.plaphy.2011.12.001] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2011] [Accepted: 12/02/2011] [Indexed: 05/19/2023]
Abstract
Arabinogalactan proteins (AGPs) are highly glycosylated members of the superfamily of hydroxyproline-rich glycoproteins (HRGPs). Despite their implication in many aspects of plant growth and development little is known about their role in tomato fruit ripening (Solanum lycopersicum) and their response to abiotic stress in tomato fruits. A search of the currently available tomato genome database resulted in the identification of 34 genes encoding putative AGPs, with at least 20 of them being expressed in fruit. We monitored the abundance of AGPs bound by JIM8 and JIM13 monoclonal antibodies as well as the gene expression profiles of the Lys-rich LeAGP1 and two classical AGPs, SlAGP2 and SlAGP4. The JIM8- and JIM13-bound AGPs showed constitutive expression during fruit ripening and under hypoxic conditions, slight up-regulation to mechanical wounding in excised tomato fruit pericarp discs and up-regulation under anoxia indicating functional roles for these proteins in the developmental program of ripening and in response to abiotic stresses. Moreover, the SlAGP2 mRNA was significantly up-regulated during fruit ripening following the climacteric ethylene production, a pattern of expression similar to that of tomato fruit PG. The SlAGP4 and LeAGP1 mRNAs were up-regulated in response to mechanical wounding while under anoxia only the SlAGP4 transcript was induced. The protein and mRNA levels of these AGPs were induced under mechanical wounding while only JIM8-bound AGPs and SIAGP4 expression were induced under anoxic conditions. Our results indicate that selected tomato AGPs seem to play a role in fruit ripening as well as in response to mechanical wounding and anoxia.
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Affiliation(s)
- Sotirios Fragkostefanakis
- Department of Horticultural Genetics & Biotechnology, Mediterranean Agronomic Institute at Chania, P.O. Box 85, Chania 73100, Greece
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23
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Pereira CS, Ribeiro JML, Vatulescu AD, Findlay K, MacDougall AJ, Jackson PAP. Extensin network formation in Vitis vinifera callus cells is an essential and causal event in rapid and H(2)O(2)-induced reduction in primary cell wall hydration. BMC PLANT BIOLOGY 2011; 11:106. [PMID: 21672244 PMCID: PMC3141637 DOI: 10.1186/1471-2229-11-106] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/22/2011] [Accepted: 06/14/2011] [Indexed: 05/18/2023]
Abstract
BACKGROUND Extensin deposition is considered important for the correct assembly and biophysical properties of primary cell walls, with consequences to plant resistance to pathogens, tissue morphology, cell adhesion and extension growth. However, evidence for a direct and causal role for the extensin network formation in changes to cell wall properties has been lacking. RESULTS Hydrogen peroxide treatment of grapevine (Vitis vinifera cv. Touriga) callus cell walls was seen to induce a marked reduction in their hydration and thickness. An analysis of matrix proteins demonstrated this occurs with the insolubilisation of an abundant protein, GvP1, which displays a primary structure and post-translational modifications typical of dicotyledon extensins. The hydration of callus cell walls free from saline-soluble proteins did not change in response to H(2)O(2), but fully regained this capacity after addition of extensin-rich saline extracts. To assay the specific contribution of GvP1 cross-linking and other wall matrix proteins to the reduction in hydration, GvP1 levels in cell walls were manipulated in vitro by binding selected fractions of extracellular proteins and their effect on wall hydration during H(2)O(2) incubation assayed. CONCLUSIONS This approach allowed us to conclude that a peroxidase-mediated formation of a covalently linked network of GvP1 is essential and causal in the reduction of grapevine callus wall hydration in response to H(2)O(2). Importantly, this approach also indicated that extensin network effects on hydration was only partially irreversible and remained sensitive to changes in matrix charge. We discuss this mechanism and the importance of these changes to primary wall properties in the light of extensin distribution in dicotyledons.
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Affiliation(s)
- Cristina Silva Pereira
- Plant Cell Wall Laboratory, Instituto de Tecnologia Química e Biológica/Universidade Nova de Lisboa, Apartado 127, 2781-901 Oeiras, Portugal
| | - José ML Ribeiro
- Plant Cell Wall Laboratory, Instituto de Tecnologia Química e Biológica/Universidade Nova de Lisboa, Apartado 127, 2781-901 Oeiras, Portugal
| | - Ada D Vatulescu
- Plant Cell Wall Laboratory, Instituto de Tecnologia Química e Biológica/Universidade Nova de Lisboa, Apartado 127, 2781-901 Oeiras, Portugal
| | - Kim Findlay
- Cell and Developmental Biology Department, John Innes Centre, Norwich Research Park, Norwich NR4 7UH, UK
| | - Alistair J MacDougall
- Department of Food Biophysics, Institute of Food Research, Norwich Research Park, Colney, Norwich, NR4 7UA, UK
| | - Phil AP Jackson
- Plant Cell Wall Laboratory, Instituto de Tecnologia Química e Biológica/Universidade Nova de Lisboa, Apartado 127, 2781-901 Oeiras, Portugal
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Rheological characterisation of juices obtained from transgenic pectate lyase-silenced strawberry fruits. Food Chem 2009. [DOI: 10.1016/j.foodchem.2009.02.058] [Citation(s) in RCA: 12] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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25
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Shah P, Gutierrez-Sanchez G, Orlando R, Bergmann C. A proteomic study of pectin-degrading enzymes secreted by Botrytis cinerea grown in liquid culture. Proteomics 2009; 9:3126-35. [PMID: 19526562 PMCID: PMC2761233 DOI: 10.1002/pmic.200800933] [Citation(s) in RCA: 61] [Impact Index Per Article: 4.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2008] [Accepted: 02/25/2009] [Indexed: 11/10/2022]
Abstract
Botrytis cinerea is a pathogenic filamentous fungus, which infects more than 200 plant species. The enzymes secreted by B. cinerea play an important role in the successful colonization of a host plant. Some of the secreted enzymes are involved in the degradation of pectin, a major component of the plant cell wall. A total of 126 proteins secreted by B. cinerea were identified by growing the fungus on highly or partially esterified pectin, or on sucrose in liquid culture. Sixty-seven common proteins were identified in each of the growth conditions, of which 50 proteins exhibited a SignalP motif. Thirteen B. cinerea proteins with functions related to pectin degradation were identified in both pectin growth conditions, while only four were identified in sucrose. Our results indicate it is unlikely that the activation of B. cinerea from the dormant state to active infection is solely dependent on changes in the degree of esterification of the pectin component of the plant cell wall. Further, these results suggest that future studies of the B. cinerea secretome in infections of ripe and unripe fruits will provide important information that will describe the mechanisms that the fungus employs to access nutrients and decompose tissues.
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Affiliation(s)
- Punit Shah
- Complex Carbohydrate Research Center, University of Georgia, Athens, GA 30602-4712, USA
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Kalua CM, Boss PK. Evolution of volatile compounds during the development of cabernet sauvignon grapes (Vitis vinifera L.). JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2009; 57:3818-30. [PMID: 19309150 DOI: 10.1021/jf803471n] [Citation(s) in RCA: 163] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
Abstract
The evolution of volatile compounds was explored in grape berries at fortnightly intervals from fruit-set to late ripening to identify when biosynthetic pathways may be targeted for enhancement of grape and wine aroma. Stepwise linear discriminant analysis (SLDA) fully recognized patterns in berry physiological developmental stages with most of the variance (>99.0%) explained. The preveraison berry developmental stage was identified as a transition stage for volatile compound biosynthesis when most compounds were potentially sequestered to nonvolatile conjugates and berries lost their potential to synthesize esters and terpenes. Terpenes (predominantly eucalyptol, beta-caryophyllene, and alpha-humulene) characterized early berry development, whereas benzene derivatives (2-phenylethanol and 2-phenylethanal) appeared toward late ripening. Furthermore, C(6) volatile compounds changed from acetate esters to aldehydes and finally to alcohols during early, middle, and late berry developmental stages, respectively. The dominance of alcohols in the late stages of berry development, preceded by aldehydes, offers an opportunity for alcohols to aldehydes ratios to be used in the prediction of harvest timing for enhanced grape and wine aroma. The evolution of volatile compounds during berry development suggests a greater dependency on enzyme activity and specificity than extent of fatty acid unsaturation. The dependence of the stage of berry development on the accumulation of the products of alcohol dehydrogenase (ADH), alcohol acetyl transferase (AAT), and enal isomerase enzyme activity from the lipoxygenase pathway raises possibilities for the manipulation of aroma profiles in grapes and wines.
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Affiliation(s)
- Curtis M Kalua
- CSIRO Plant Industry and Food Futures Flagship, P.O. Box 350, Glen Osmond, SA 5064, Australia.
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Purification and characterisation of multiple forms of polygalacturonase from mango (Mangifera indica cv. Dashehari) fruit. Food Chem 2008; 111:345-9. [DOI: 10.1016/j.foodchem.2008.03.072] [Citation(s) in RCA: 21] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2007] [Revised: 03/18/2008] [Accepted: 03/25/2008] [Indexed: 11/21/2022]
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Guo S, Zhou Q, Lu T, Ding X, Huang X. Inhibition Mechanism of TbIIIon Horseradish Peroxidase Activity. Chem Biodivers 2008; 5:2050-2059. [DOI: 10.1002/cbdv.200890187] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
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29
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Saladié M, Matas AJ, Isaacson T, Jenks MA, Goodwin SM, Niklas KJ, Xiaolin R, Labavitch JM, Shackel KA, Fernie AR, Lytovchenko A, O'Neill MA, Watkins CB, Rose JKC. A reevaluation of the key factors that influence tomato fruit softening and integrity. PLANT PHYSIOLOGY 2007; 144:1012-28. [PMID: 17449643 PMCID: PMC1914194 DOI: 10.1104/pp.107.097477] [Citation(s) in RCA: 98] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/02/2007] [Accepted: 04/12/2007] [Indexed: 05/15/2023]
Abstract
The softening of fleshy fruits, such as tomato (Solanum lycopersicum), during ripening is generally reported to result principally from disassembly of the primary cell wall and middle lamella. However, unsuccessful attempts to prolong fruit firmness by suppressing the expression of a range of wall-modifying proteins in transgenic tomato fruits do not support such a simple model. 'Delayed Fruit Deterioration' (DFD) is a previously unreported tomato cultivar that provides a unique opportunity to assess the contribution of wall metabolism to fruit firmness, since DFD fruits exhibit minimal softening but undergo otherwise normal ripening, unlike all known nonsoftening tomato mutants reported to date. Wall disassembly, reduced intercellular adhesion, and the expression of genes associated with wall degradation were similar in DFD fruit and those of the normally softening 'Ailsa Craig'. However, ripening DFD fruit showed minimal transpirational water loss and substantially elevated cellular turgor. This allowed an evaluation of the relative contribution and timing of wall disassembly and water loss to fruit softening, which suggested that both processes have a critical influence. Biochemical and biomechanical analyses identified several unusual features of DFD cuticles and the data indicate that, as with wall metabolism, changes in cuticle composition and architecture are an integral and regulated part of the ripening program. A model is proposed in which the cuticle affects the softening of intact tomato fruit both directly, by providing a physical support, and indirectly, by regulating water status.
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Affiliation(s)
- Montserrat Saladié
- Department of Plant Biology , Cornell University, Ithaca, New York 14853, USA
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31
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Sesmero R, Quesada M, Mercado J. Antisense inhibition of pectate lyase gene expression in strawberry fruit: Characteristics of fruits processed into jam. J FOOD ENG 2007. [DOI: 10.1016/j.jfoodeng.2006.01.044] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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Dubey A, Diwakar SK, Rawat SK, Kumar P, Batra N, Joshi A, Singh J. Characterization of Ionically Bound Peroxidases from Apple(Mallus pumilus) Fruits. Prep Biochem Biotechnol 2007; 37:47-58. [PMID: 17134982 DOI: 10.1080/10826060601040871] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/23/2022]
Abstract
Ionically bound peroxidases (POD) were salt extracted from the pulp of four Indian apple varieties, i.e., Golden delicious HP, Golden delicious JK, Red delicious, and Royal delicious. They were precipitated with chilled ethanol. Thermal treatments of partially purified enzymes were given from 40-70 degrees C for 30 minutes. Golden delicious HP peroxidase showed thermostability at 60 degrees C, while three other peroxidases were observed at 50 degrees C. Phenolic compounds (i.e., caffeic acid, ferulic acids, p-coumaric acid, protocatechuic acid) and metal ions (i.e., Cu2+ and Fe2+) activated all apple peroxidases. However, Mn2+ inhibited the peroxidases from Golden delicious HP, Golden delicious JK, and Red delicious, and a substantial increase was observed in Royal delicious peroxidase. Mg2+ inhibited the peroxidases from Golden delicious HP and Red delicious, but marginal activation was reported in peroxidases from Golden delicious JK and Royal delicious. Zn2+ established stimulation in Golden delicious HP and Golden delicious JK peroxidases, but inhibition was observed in peroxidases in Red delicious and Royal delicious.. Methionine, proline, tryptophan, and valine stimulated all four apple peroxidases, but cysteine showed inhibition in Golden delicious JK.
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Affiliation(s)
- A Dubey
- Department of Biotechnology, DDU Gorakhpur University, Uttar Pradesh, India
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Abstract
Fruits constitute a commercially important and nutritionally indispensable food commodity. Being a part of a balanced diet, fruits play a vital role in human nutrition by supplying the necessary growth regulating factors essential for maintaining normal health. Fruits are widely distributed in nature. One of the limiting factors that influence their economic value is the relatively short ripening period and reduced post-harvest life. Fruit ripening is a highly coordinated, genetically programmed, and an irreversible phenomenon involving a series of physiological, biochemical, and organoleptic changes, that finally leads to the development of a soft edible ripe fruit with desirable quality attributes. Excessive textural softening during ripening leads to adverse effects/spoilage upon storage. Carbohydrates play a major role in the ripening process, by way of depolymerization leading to decreased molecular size with concomitant increase in the levels of ripening inducing specific enzymes, whose target differ from fruit to fruit. The major classes of cell wall polysaccharides that undergo modifications during ripening are starch, pectins, cellulose, and hemicelluloses. Pectins are the common and major components of primary cell wall and middle lamella, contributing to the texture and quality of fruits. Their degradation during ripening seems to be responsible for tissue softening of a number of fruits. Structurally pectins are a diverse group of heteropolysaccharides containing partially methylated D-galacturonic acid residues with side chain appendages of several neutral polysaccharides. The degree of polymerization/esterification and the proportion of neutral sugar residues/side chains are the principal factors contributing to their (micro-) heterogeneity. Pectin degrading enzymes such as polygalacturonase, pectin methyl esterase, lyase, and rhamnogalacturonase are the most implicated in fruit-tissue softening. Recent advances in molecular biology have provided a better understanding of the biochemistry of fruit ripening as well as providing a hand for genetic manipulation of the entire ripening process. It is desirable that significant breakthroughs in such related areas will come forth in the near future, leading to considerable societal benefits.
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Affiliation(s)
- V Prasanna
- Department of Biochemistry and Nutrition, Central Food Technological Research Institute. Mysore, Karnataka, 570020. India
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Bargel H, Koch K, Cerman Z, Neinhuis C. Structure-function relationships of the plant cuticle and cuticular waxes - a smart material? FUNCTIONAL PLANT BIOLOGY : FPB 2006; 33:893-910. [PMID: 32689300 DOI: 10.1071/fp06139] [Citation(s) in RCA: 131] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/30/2006] [Accepted: 08/18/2006] [Indexed: 05/21/2023]
Abstract
The cuticle is the main interface between plants and their environment. It covers the epidermis of all aerial primary parts of plant organs as a continuous extracellular matrix. This hydrophobic natural composite consists mainly of the biopolymer, cutin, and cuticular lipids collectively called waxes, with a high degree of variability in composition and structure. The cuticle and cuticular waxes exhibit a multitude of functions that enable plant life in many different terrestrial habitats and play important roles in interfacial interactions. This review highlights structure-function relationships that are the subjects of current research activities. The surface waxes often form complex crystalline microstructures that originate from self-assembly processes. The concepts and results of the analysis of model structures and the influence of template effects are critically discussed. Recent investigations of surface waxes by electron and X-ray diffraction revealed that these could be assigned to three crystal symmetry classes, while the background layer is not amorphous, but has an orthorhombic order. In addition, advantages of the characterisation of formation of model wax types on a molecular scale are presented. Epicuticular wax crystals may cause extreme water repellency and, in addition, a striking self-cleaning property. The principles of wetting and up-to-date concepts of the transfer of plant surface properties to biomimetic technical applications are reviewed. Finally, biomechanical studies have demonstrated that the cuticle is a mechanically important structure, whose properties are dynamically modified by the plant in response to internal and external stimuli. Thus, the cuticle combines many aspects attributed to smart materials.
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Affiliation(s)
- Hendrik Bargel
- Institut für Botanik, Technische Universität Dresen, Zellescher Weg 22, 01062 Dresden, Germany
| | - Kerstin Koch
- Nees-Institut für Biodiversität der Pflanzen, Universität Bonn, Meckenheimer Allee 170, 53115 Bonn, Germany
| | - Zdenek Cerman
- Nees-Institut für Biodiversität der Pflanzen, Universität Bonn, Meckenheimer Allee 170, 53115 Bonn, Germany
| | - Christoph Neinhuis
- Institut für Botanik, Technische Universität Dresen, Zellescher Weg 22, 01062 Dresden, Germany
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Tharanathan R, Yashoda H, Prabha T. Mango(Mangifera indica L.), “The King of Fruits”—An Overview. FOOD REVIEWS INTERNATIONAL 2006. [DOI: 10.1080/87559120600574493] [Citation(s) in RCA: 107] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
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36
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Tatsuki M, Haji T, Yamaguchi M. The involvement of 1-aminocyclopropane-1-carboxylic acid synthase isogene, Pp-ACS1, in peach fruit softening. JOURNAL OF EXPERIMENTAL BOTANY 2006; 57:1281-9. [PMID: 16531466 DOI: 10.1093/jxb/erj097] [Citation(s) in RCA: 17] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Ethylene promotes fruit ripening, including softening. The fruit of melting-flesh peach (Prunus persica (L). Batsch) cultivar 'Akatsuki' produces increasing levels of ethylene, and the flesh firmness softens rapidly during the ripening stage. On the other hand, the fruit of stony hard peach cultivars 'Yumyeong', 'Odoroki', and 'Manami' does not soften and produces little ethylene during fruit ripening and storage. To clarify the mechanism of suppression of ethylene production in stony hard peaches, the expression patterns of four ethylene biosynthesis enzymes were examined: ACC synthases (Pp-ACS1, Pp-ACS2, and Pp-ACS3) and ACC oxidase (Pp-ACO1). In the melting-flesh cultivar 'Akatsuki', Pp-ACS1 mRNA was dramatically induced after harvesting, and a large amount of ethylene was produced. On the other hand, in stony hard peaches, Pp-ACS1 mRNA was not induced during the ripening stage, and ethylene production was inhibited. Since Pp-ACS1 mRNA was induced normally in senescing flowers, wounded leaves, and wounded immature fruit of 'Yumyeong', Pp-ACS1 was suppressed only at the ripening stage, and was not a defect in Pp-ACS1. These results indicate that the suppression of fruit softening in stony hard peach cultivars was caused by a low level of ethylene production, which depends on the suppressed expression of Pp-ACS1.
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Affiliation(s)
- Miho Tatsuki
- National Institute of Fruit Tree Science, NARO, Fujimoto, 2-1 Tsukuba, Ibaraki 305-8605, Japan.
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38
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Gage DJ. Infection and invasion of roots by symbiotic, nitrogen-fixing rhizobia during nodulation of temperate legumes. Microbiol Mol Biol Rev 2004; 68:280-300. [PMID: 15187185 PMCID: PMC419923 DOI: 10.1128/mmbr.68.2.280-300.2004] [Citation(s) in RCA: 459] [Impact Index Per Article: 23.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
Bacteria belonging to the genera Rhizobium, Mesorhizobium, Sinorhizobium, Bradyrhizobium, and Azorhizobium (collectively referred to as rhizobia) grow in the soil as free-living organisms but can also live as nitrogen-fixing symbionts inside root nodule cells of legume plants. The interactions between several rhizobial species and their host plants have become models for this type of nitrogen-fixing symbiosis. Temperate legumes such as alfalfa, pea, and vetch form indeterminate nodules that arise from root inner and middle cortical cells and grow out from the root via a persistent meristem. During the formation of functional indeterminate nodules, symbiotic bacteria must gain access to the interior of the host root. To get from the outside to the inside, rhizobia grow and divide in tubules called infection threads, which are composite structures derived from the two symbiotic partners. This review focuses on symbiotic infection and invasion during the formation of indeterminate nodules. It summarizes root hair growth, how root hair growth is influenced by rhizobial signaling molecules, infection of root hairs, infection thread extension down root hairs, infection thread growth into root tissue, and the plant and bacterial contributions necessary for infection thread formation and growth. The review also summarizes recent advances concerning the growth dynamics of rhizobial populations in infection threads.
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Affiliation(s)
- Daniel J Gage
- Department of Molecular and Cell Biology, University of Connecticut, 75 N. Eagleville Rd., U-44, Storrs, CT 06269, USA.
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39
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Abstract
Pectate lyase (PEL) activity was demonstrated in ripe banana fruits on supplementing the homogenizing medium with cysteine and Triton X-100. The enzyme was characterized on the basis of alkaline pH optimum, elimination of the activity by EDTA and activation by Ca(2+). PEL activity was not detected in preclimacteric banana fruits. PEL activity increased progressively from early climacteric and reached maximum level at climacteric peak and declined in post climacteric and over ripened fruits. Replacing pectate with pectin in PEL assay manifested enzyme activity even in preclimacteric fruits. In contrast to PEL, polygalacturonase activity progressively increased during fruit ripening even in postclimacteric fruits.
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Affiliation(s)
- Anurag Payasi
- Department of Biochemistry, University of Lucknow, -226 007, Lucknow, India
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ARENAS-OCAMPO M, EVANGELISTA-LOZANO S, ARANA-ERRASQUIN R, JIMÉNEZ-APARICIO A, DÁVILA-ORTÍZ G. SOFTENING AND BIOCHEMICAL CHANGES OF SAPOTE MAMEY FRUIT (POUTERIA SAPOTA) AT DIFFERENT DEVELOPMENT AND RIPENING STAGES. J Food Biochem 2003. [DOI: 10.1111/j.1745-4514.2003.tb00269.x] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Ramakrishna W, Deng Z, Ding CK, Handa AK, Ozminkowski RH. A novel small heat shock protein gene, vis1, contributes to pectin depolymerization and juice viscosity in tomato fruit. PLANT PHYSIOLOGY 2003; 131:725-35. [PMID: 12586896 PMCID: PMC166848 DOI: 10.1104/pp.012401] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2002] [Revised: 09/20/2002] [Accepted: 11/04/2002] [Indexed: 05/05/2023]
Abstract
We have characterized a novel small heat shock protein gene, viscosity 1 (vis1) from tomato (Lycopersicon esculentum) and provide evidence that it plays a role in pectin depolymerization and juice viscosity in ripening fruits. Expression of vis1 is negatively associated with juice viscosity in diverse tomato genotypes. vis1 exhibits DNA polymorphism among tomato genotypes, and the alleles vis1-hta (high-transcript accumulator; accession no. AY128101) and vis1-lta (low transcript accumulator; accession no. AY128102) are associated with thinner and thicker juice, respectively. Segregation of tomato lines heterogeneous for vis1 alleles indicates that vis1 influences pectin depolymerization and juice viscosity in ripening fruits. vis1 is regulated by fruit ripening and high temperature and exhibits a typical heat shock protein chaperone function when expressed in bacterial cells. We propose that VIS1 contributes to physiochemical properties of juice, including pectin depolymerization, by reducing thermal denaturation of depolymerizing enzymes during daytime elevated temperatures.
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Rondeau-Mouro C, Crepeau MJ, Lahaye M. Application of CP-MAS and liquid-like solid-state NMR experiments for the study of the ripening-associated cell wall changes in tomato. Int J Biol Macromol 2003; 31:235-44. [PMID: 12568932 DOI: 10.1016/s0141-8130(02)00086-7] [Citation(s) in RCA: 19] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
13C and 1H NMR spectra of an ethanol insoluble material (EIM) prepared from the pericarp of mature-green (MG) and red-ripe (RR) tomato fruits were acquired in 'liquid-like' and cross-polarisation with dipolar decoupling and magic angle spinning (CPMAS) conditions using the same triple resonance probe. Such a strategy allowed acquisitions of various NMR experiments aimed at detecting compositional differences as well as distinguishing differences in molecular mobility for various constituent polysaccharides related with the two ripening stages. Increase of the proton dipolar decoupling power levels from 3 to 50-55 kHz during single pulse 13C acquisition, led to more intense signals for pectic and hemicellulosic polysaccharides. This behaviour was interpreted as reflecting motional restrictions of these polysaccharides inside the porous cell wall network. Measurements of the proton rotating frame relaxation times T(1rho) in the 'liquid-like' conditions and of the proton transverse relaxation times T(2) from CPMAS spectra, revealed changes in mobilities for some pectic polysaccharides in relation with ripening, particularly for the H1 and H5 protons of alpha-1,5 arabinan (Ara) side chains of rhamnogalacturonans. These data are discussed in relation with known pectic modifications occurring during ripening and associated with the tomato fruit softening.
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Affiliation(s)
- Corinne Rondeau-Mouro
- Unité de Physico-Chimie des Macromolécules, Institut National de la Recherche Agronomique, Rue de la Géraudière, BP 71627, 44316 Nantes Cedex 03, France.
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Peumans WJ, Proost P, Swennen RL, Van Damme EJM. The abundant class III chitinase homolog in young developing banana fruits behaves as a transient vegetative storage protein and most probably serves as an important supply of amino acids for the synthesis of ripening-associated proteins. PLANT PHYSIOLOGY 2002; 130:1063-72. [PMID: 12376669 PMCID: PMC166631 DOI: 10.1104/pp.006551] [Citation(s) in RCA: 35] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/31/2002] [Revised: 04/20/2002] [Accepted: 06/02/2002] [Indexed: 05/18/2023]
Abstract
Analyses of the protein content and composition revealed dramatic changes in gene expression during in situ banana (Musa spp.) fruit formation/ripening. The total banana protein content rapidly increases during the first 60 to 70 d, but remains constant for the rest of fruit formation/ripening. During the phase of rapid protein accumulation, an inactive homolog of class III chitinases accounts for up to 40% (w/v) of the total protein. Concomitant with the arrest of net protein accumulation, the chitinase-related protein (CRP) progressively decreases and several novel proteins appear in the electropherograms. Hence, CRP behaves as a fruit-specific vegetative storage protein that accumulates during early fruit formation and serves as a source of amino acids for the synthesis of ripening-associated proteins. Analyses of individual proteins revealed that a thaumatin-like protein, a beta-1,3-glucanase, a class I chitinase, and a mannose-binding lectin are the most abundant ripening-associated proteins. Because during the ripening of prematurely harvested bananas, similar changes take place as in the in situ ripening bananas, CRP present in immature fruits is a sufficient source of amino acids for a quasi-normal synthesis of ripening-associated proteins. However, it is evident that the conversion of CRP in ripening-associated proteins takes place at an accelerated rate, especially when climacteric ripening is induced by ethylene. The present report also includes a discussion of the accumulation of the major banana allergens and the identification of suitable promoters for the production of vaccines in transgenic bananas.
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Affiliation(s)
- Willy J Peumans
- Laboratory for Phytopathology and Plant Protection, Catholic University Leuven, 3001 Leuven, Belgium
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Aharoni A, Keizer LCP, Van Den Broeck HC, Blanco-Portales R, Muñoz-Blanco J, Bois G, Smit P, De Vos RCH, O'Connell AP. Novel insight into vascular, stress, and auxin-dependent and -independent gene expression programs in strawberry, a non-climacteric fruit. PLANT PHYSIOLOGY 2002; 129:1019-31. [PMID: 12114557 PMCID: PMC166497 DOI: 10.1104/pp.003558] [Citation(s) in RCA: 59] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/01/2002] [Revised: 03/02/2002] [Accepted: 03/26/2002] [Indexed: 05/17/2023]
Abstract
Using cDNA microarrays, a comprehensive investigation of gene expression was carried out in strawberry (Fragaria x ananassa) fruit to understand the flow of events associated with its maturation and non-climacteric ripening. We detected key processes and novel genes not previously associated with fruit development and ripening, related to vascular development, oxidative stress, and auxin response. Microarray analysis during fruit development and in receptacle and seed (achene) tissues established an interesting parallelism in gene expression between the transdifferentiation of tracheary elements in Zinnia elegans and strawberry. One of the genes, CAD, common to both systems and encoding the lignin-related protein cinnamyl alcohol dehydrogenase, was immunolocalized to immature xylem cells of the vascular bundles in the strawberry receptacle. To examine the importance of oxidative stress in ripening, gene expression was compared between fruit treated on-vine with a free radical generator and non-treated fruit. Of 46 genes induced, 20 were also ripening regulated. This might suggest that active gene expression is induced to cope with oxidative stress conditions during ripening or that the strawberry ripening transcriptional program is an oxidative stress-induced process. To gain insight into the hormonal control of non-climacteric fruit ripening, an additional microarray experiment was conducted comparing gene expression in fruit treated exogenously with auxin and control fruit. Novel auxin-dependent genes and processes were identified in addition to transcriptional programs acting independent of auxin mainly related to cell wall metabolism and stress response.
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Affiliation(s)
- Asaph Aharoni
- Business Unit Cell Cybernetics, Plant Research International, P.O. Box 16, 6700 AA, Wageningen, The Netherlands.
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Pectinesterase and polygalacturonase in changes of pectic matter in olives (cv. Hojiblanca) intended for milling. J AM OIL CHEM SOC 2002. [DOI: 10.1007/s11746-002-0440-7] [Citation(s) in RCA: 18] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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46
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Redondo-Nevado J, Moyano E, Medina-Escobar N, Caballero JL, Muñoz-Blanco J. A fruit-specific and developmentally regulated endopolygalacturonase gene from strawberry (Fragaria x ananassa cv. Chandler). JOURNAL OF EXPERIMENTAL BOTANY 2001; 52:1941-1945. [PMID: 11520883 DOI: 10.1093/jexbot/52.362.1941] [Citation(s) in RCA: 29] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
A fruit-specific and developmentally regulated polygalacturonase gene (spG gene) from strawberry (Fragaria x ananassa cv. Chandler) has been cloned and characterized at a molecular and physiological level. Comparison analysis of the corresponding deduced sPG protein have shown that this strawberry gene is similar to Clade A endopolygalacturonase genes. Moreover, the spatio-temporal and hormonal gene expression pattern suggests a close relationship between the expression of this gene and the onset of the strawberry fruit ripening process and agrees with that of the production of oligosaccharins which have already been described as active molecules involved in fruit ripening. The results are discussed in terms of a putative role of this enzyme in the release of oligosaccharins from the strawberry fruit cell wall.
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Affiliation(s)
- J Redondo-Nevado
- Departamento de Bioquímica y Biología Molecular, Edificio C-6, Campus Universitario de Rabanales, Universidad de Córdoba, 14071 Córdoba, Spain
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47
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Giovannoni J. MOLECULAR BIOLOGY OF FRUIT MATURATION AND RIPENING. ANNUAL REVIEW OF PLANT PHYSIOLOGY AND PLANT MOLECULAR BIOLOGY 2001; 52:725-749. [PMID: 11337414 DOI: 10.1146/annurev.arplant.52.1.725] [Citation(s) in RCA: 404] [Impact Index Per Article: 17.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
The development and maturation of fruits has received considerable scientific scrutiny because of both the uniqueness of such processes to the biology of plants and the importance of fruit as a significant component of the human diet. Molecular and genetic analysis of fruit development, and especially ripening of fleshy fruits, has resulted in significant gains in knowledge over recent years. Great strides have been made in the areas of ethylene biosynthesis and response, cell wall metabolism, and environmental factors, such as light, that impact ripening. Discoveries made in Arabidopsis in terms of general mechanisms for signal transduction, in addition to specific mechanisms of carpel development, have assisted discovery in more traditional models such as tomato. This review attempts to coalesce recent findings in the areas of fruit development and ripening.
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Affiliation(s)
- Jim Giovannoni
- USDA-ARS Plant, Soil and Nutrition Laboratory and Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, New York 14853; e-mail:
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Stewart D, Iannetta PP, Davies HV. Ripening-related changes in raspberry cell wall composition and structure. PHYTOCHEMISTRY 2001; 56:423-428. [PMID: 11261574 DOI: 10.1016/s0031-9422(00)00410-6] [Citation(s) in RCA: 20] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/23/2023]
Abstract
Cell walls were prepared from the fruit of two cultivars of raspberry at three stages of ripening; green, white and red (ripe). The cultivars. Glen Clova and Glen Prosen, are subjectively classified, at harvest by growers, as soft and firm fruit, respectively. The cell walls were analysed for neutral sugar composition, uronic acid content, degree of methyl esterification, lignin and ferulic acid-derived dehydrodimers. Solid-state 31C NMR and diffuse reflectance infrared (DRIFT) spectra were acquired for the cell wall residues. For both cultivars the progression from green to white produced minimal changes, save for a reduction in pectin. NMR analyses indicated that the solubilized pectin was acetylated. Progression to the red (ripe) stage, in both cultivars, was accompanied by a reduction in the ordered cellulose and a dramatic reduction in pectin content and the degree of methyl-esterification. Significantly, the softer fruit (Glen Clova) exhibited greater reductions in both parameters, implicating increased pectin hydrolysis, as one of the main factors contributing to the difference in firmness between the cultivars. A relative increase in cell wall-associated protein was seen at the red stage. The nature and function of the protein(s) are, as yet unknown.
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Affiliation(s)
- D Stewart
- Department of Cellular and Enviromental Physiology, Scottish Crop Research Institute, Dundee, UK.
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49
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Abstract
Pectin depolymerization during fruit ripening has been shown to be largely due to pectinolytic enzymes, including polygalacturonases (E.C. 3.2.1.15) and pectinmethylesterases (E.C. 3.2.1.11). Studies have shown that these enzymes are not the primary determinants of softening, although participation in texture changes during the late stages of ripening seems evident. Pectin depolymerization differs significantly between various fruit types, notably avocado and tomato, even though levels of extractable PG activity in these fruits are similar. Collective evidence indicates that the activities of some cell wall enzymes are restricted in vivo, with maximum hydrolytic potential expressed only in response to tissue disruption or wounding. In contrast, other enzymes reported to participate in pectin degradation, notably beta-galactosidases/exo-galactanases, exhibit in vitro activity far below that anticipated to be required for the loss of cell wall galactosyl residues during ripening. Factors controlling in vivo hydrolysis have not been fully explored but might include apoplastic pH, cell wall inorganic ion levels, non-enzymic proteins including the noncatalytic beta-subunit and expansins, wall porosity, and steric hindrances. Recent studies of cell wall metabolism during ripening have demonstrated an orderly process involving, in the early stages, cell wall relaxation and hemicellulose degradation followed, in the later stages, by pectin depolymerization. A limited number of studies have indicated that radical oxygen species generated either enzymically or non-enzymically might participate in scission of pectins and other polysaccharides during ripening and other developmental processes. Similar mechanisms might also occur in response to wounding, an event typically followed by an oxidative burst. Cell wall degradation as influenced by physical wounding could be of particular relevance to the deterioration of lightly processed fruits.
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