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Flannery SE, Pastorelli F, Wood WHJ, Hunter CN, Dickman MJ, Jackson PJ, Johnson MP. Comparative proteomics of thylakoids from Arabidopsis grown in laboratory and field conditions. PLANT DIRECT 2021; 5:e355. [PMID: 34712896 PMCID: PMC8528093 DOI: 10.1002/pld3.355] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/30/2021] [Revised: 09/21/2021] [Accepted: 09/28/2021] [Indexed: 06/13/2023]
Abstract
Compared to controlled laboratory conditions, plant growth in the field is rarely optimal since it is frequently challenged by large fluctuations in light and temperature which lower the efficiency of photosynthesis and lead to photo-oxidative stress. Plants grown under natural conditions therefore place an increased onus on the regulatory mechanisms that protect and repair the delicate photosynthetic machinery. Yet, the exact changes in thylakoid proteome composition which allow plants to acclimate to the natural environment remain largely unexplored. Here, we use quantitative label-free proteomics to demonstrate that field-grown Arabidopsis plants incorporate aspects of both the low and high light acclimation strategies previously observed in laboratory-grown plants. Field plants showed increases in the relative abundance of ATP synthase, cytochrome b 6 f, ferredoxin-NADP+ reductases (FNR1 and FNR2) and their membrane tethers TIC62 and TROL, thylakoid architecture proteins CURT1A, CURT1B, RIQ1, and RIQ2, the minor monomeric antenna complex CP29.3, rapidly-relaxing non-photochemical quenching (qE)-related proteins PSBS and VDE, the photosystem II (PSII) repair machinery and the cyclic electron transfer complexes NDH, PGRL1B, and PGR5, in addition to decreases in the amounts of LHCII trimers composed of LHCB1.1, LHCB1.2, LHCB1.4, and LHCB2 proteins and CP29.2, all features typical of a laboratory high light acclimation response. Conversely, field plants also showed increases in the abundance of light harvesting proteins LHCB1.3 and CP29.1, zeaxanthin epoxidase (ZEP) and the slowly-relaxing non-photochemical quenching (qI)-related protein LCNP, changes previously associated with a laboratory low light acclimation response. Field plants also showed distinct changes to the proteome including the appearance of stress-related proteins ELIP1 and ELIP2 and changes to proteins that are largely invariant under laboratory conditions such as state transition related proteins STN7 and TAP38. We discuss the significance of these alterations in the thylakoid proteome considering the unique set of challenges faced by plants growing under natural conditions.
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Affiliation(s)
- Sarah E. Flannery
- Department of Molecular Biology and BiotechnologyUniversity of SheffieldSheffieldUK
| | - Federica Pastorelli
- Department of Molecular Biology and BiotechnologyUniversity of SheffieldSheffieldUK
| | - William H. J. Wood
- Department of Molecular Biology and BiotechnologyUniversity of SheffieldSheffieldUK
| | - C. Neil Hunter
- Department of Molecular Biology and BiotechnologyUniversity of SheffieldSheffieldUK
| | - Mark J. Dickman
- Department of Chemical and Biological EngineeringUniversity of SheffieldSheffieldUK
| | - Philip J. Jackson
- Department of Molecular Biology and BiotechnologyUniversity of SheffieldSheffieldUK
- Department of Chemical and Biological EngineeringUniversity of SheffieldSheffieldUK
| | - Matthew P. Johnson
- Department of Molecular Biology and BiotechnologyUniversity of SheffieldSheffieldUK
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2
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Nozue H, Shigarami T, Fukuda S, Chino T, Saruta R, Shirai K, Nozue M, Kumazaki S. Growth-phase dependent morphological alteration in higher plant thylakoid is accompanied by changes in both photodamage and repair rates. PHYSIOLOGIA PLANTARUM 2021; 172:1983-1996. [PMID: 33786842 DOI: 10.1111/ppl.13408] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/27/2020] [Revised: 02/18/2021] [Accepted: 03/23/2021] [Indexed: 06/12/2023]
Abstract
Thylakoid membranes of young leaves consist of grana and stroma lamellae (stroma-grana [SG] structure). The SG thylakoid is gradually converted into isolated grana (IG), almost lacking the stroma lamellae during growth. This morphological alteration was found to cause a reduction in maximum photosynthetic rate and an enhancement of photoinhibition in photosystem II (PSII). In situ microspectrometric measurements of chlorophyll fluorescence in individual chloroplasts suggested an increase of the PSII/PSI ratio in IG thylakoids of mature leaves. Western blot analysis of isolated IG thylakoids showed relative increases in some PSII components, including the core protein (D1) and light-harvesting components CP24 and Lhcb2. Notably, a nonphotochemical quenching-related factor in the PSII supercomplex, PsbS, decreased by 40%. Changes in the high light response of PSII were detected through parameters of pulse-amplitude modulation fluorometry. Chlorophyll fluorescence lifetime indicated an increase of fluorescence quantum yield in IG. A minimal photodamage-repair rate analysis on a lincomycin treatment of the leaves indicated that repair rate constant of IG is slower than that of SG, while photodamage rate of IG is higher than that of SG. These results suggest that IG thylakoids are relatively sensitive to high light, which is not only due to a higher photodamage rate caused by some rearrangements of PS complexes, but also to the retarded PSII repair that may result from the lack of stroma lamellae. The IG thylakoids found among many plant species thus seem to be an adaptive form to low light environments, although their physiological roles still remain unclear.
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Affiliation(s)
- Hatsumi Nozue
- Research Center for Advanced Plant Factory (SU-PLAF), Faculty of Textile Science and Technology, Shinshu University, Nagano, Japan
| | - Takashi Shigarami
- Faculty of Textile Science and Technology, Shinshu University, Nagano, Japan
| | - Shinji Fukuda
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, Japan
| | - Takayuki Chino
- Faculty of Textile Science and Technology, Shinshu University, Nagano, Japan
| | - Ryouta Saruta
- Faculty of Textile Science and Technology, Shinshu University, Nagano, Japan
| | - Kana Shirai
- Research Center for Advanced Plant Factory (SU-PLAF), Faculty of Textile Science and Technology, Shinshu University, Nagano, Japan
| | - Masayuki Nozue
- Research Center for Advanced Plant Factory (SU-PLAF), Faculty of Textile Science and Technology, Shinshu University, Nagano, Japan
- Faculty of Textile Science and Technology, Shinshu University, Nagano, Japan
| | - Shigeichi Kumazaki
- Department of Chemistry, Graduate School of Science, Kyoto University, Kyoto, Japan
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3
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Yu L, Fan J, Zhou C, Xu C. Chloroplast lipid biosynthesis is fine-tuned to thylakoid membrane remodeling during light acclimation. PLANT PHYSIOLOGY 2021; 185:94-107. [PMID: 33631801 PMCID: PMC8133659 DOI: 10.1093/plphys/kiaa013] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2020] [Accepted: 10/21/2020] [Indexed: 05/29/2023]
Abstract
Reprogramming metabolism, in addition to modifying the structure and function of the photosynthetic machinery, is crucial for plant acclimation to changing light conditions. One of the key acclimatory responses involves reorganization of the photosynthetic membrane system including changes in thylakoid stacking. Glycerolipids are the main structural component of thylakoids and their synthesis involves two main pathways localized in the plastid and the endoplasmic reticulum (ER); however, the role of lipid metabolism in light acclimation remains poorly understood. We found that fatty acid synthesis, membrane lipid content, the plastid lipid biosynthetic pathway activity, and the degree of thylakoid stacking were significantly higher in plants grown under low light compared with plants grown under normal light. Plants grown under high light, on the other hand, showed a lower rate of fatty acid synthesis, a higher fatty acid flux through the ER pathway, higher triacylglycerol content, and thylakoid membrane unstacking. We additionally demonstrated that changes in rates of fatty acid synthesis under different growth light conditions are due to post-translational regulation of the plastidic acetyl-CoA carboxylase activity. Furthermore, Arabidopsis mutants defective in one of the two glycerolipid biosynthetic pathways displayed altered growth patterns and a severely reduced ability to remodel thylakoid architecture, particularly under high light. Overall, this study reveals how plants fine-tune fatty acid and glycerolipid biosynthesis to cellular metabolic needs in response to long-term changes in light conditions, highlighting the importance of lipid metabolism in light acclimation.
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Affiliation(s)
- Linhui Yu
- Biology Department, Brookhaven National Laboratory, Upton, New York 11973, USA
| | - Jilian Fan
- Biology Department, Brookhaven National Laboratory, Upton, New York 11973, USA
| | - Chao Zhou
- Biology Department, Brookhaven National Laboratory, Upton, New York 11973, USA
| | - Changcheng Xu
- Biology Department, Brookhaven National Laboratory, Upton, New York 11973, USA
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4
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Flannery SE, Hepworth C, Wood WHJ, Pastorelli F, Hunter CN, Dickman MJ, Jackson PJ, Johnson MP. Developmental acclimation of the thylakoid proteome to light intensity in Arabidopsis. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021; 105:223-244. [PMID: 33118270 PMCID: PMC7898487 DOI: 10.1111/tpj.15053] [Citation(s) in RCA: 30] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2020] [Revised: 10/13/2020] [Accepted: 10/21/2020] [Indexed: 05/03/2023]
Abstract
Photosynthetic acclimation, the ability to adjust the composition of the thylakoid membrane to optimise the efficiency of electron transfer to the prevailing light conditions, is crucial to plant fitness in the field. While much is known about photosynthetic acclimation in Arabidopsis, to date there has been no study that combines both quantitative label-free proteomics and photosynthetic analysis by gas exchange, chlorophyll fluorescence and P700 absorption spectroscopy. Using these methods we investigated how the levels of 402 thylakoid proteins, including many regulatory proteins not previously quantified, varied upon long-term (weeks) acclimation of Arabidopsis to low (LL), moderate (ML) and high (HL) growth light intensity and correlated these with key photosynthetic parameters. We show that changes in the relative abundance of cytb6 f, ATP synthase, FNR2, TIC62 and PGR6 positively correlate with changes in estimated PSII electron transfer rate and CO2 assimilation. Improved photosynthetic capacity in HL grown plants is paralleled by increased cyclic electron transport, which positively correlated with NDH, PGRL1, FNR1, FNR2 and TIC62, although not PGR5 abundance. The photoprotective acclimation strategy was also contrasting, with LL plants favouring slowly reversible non-photochemical quenching (qI), which positively correlated with LCNP, while HL plants favoured rapidly reversible quenching (qE), which positively correlated with PSBS. The long-term adjustment of thylakoid membrane grana diameter positively correlated with LHCII levels, while grana stacking negatively correlated with CURT1 and RIQ protein abundance. The data provide insights into how Arabidopsis tunes photosynthetic electron transfer and its regulation during developmental acclimation to light intensity.
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Affiliation(s)
- Sarah E. Flannery
- Department of Molecular Biology and BiotechnologyUniversity of SheffieldFirth CourtWestern BankSheffieldUK
| | - Christopher Hepworth
- Department of Molecular Biology and BiotechnologyUniversity of SheffieldFirth CourtWestern BankSheffieldUK
| | - William H. J. Wood
- Department of Molecular Biology and BiotechnologyUniversity of SheffieldFirth CourtWestern BankSheffieldUK
| | - Federica Pastorelli
- Department of Molecular Biology and BiotechnologyUniversity of SheffieldFirth CourtWestern BankSheffieldUK
| | - Christopher N. Hunter
- Department of Molecular Biology and BiotechnologyUniversity of SheffieldFirth CourtWestern BankSheffieldUK
| | - Mark J. Dickman
- Department of Chemical and Biological EngineeringChELSI InstituteUniversity of SheffieldSheffieldUK
| | - Philip J. Jackson
- Department of Molecular Biology and BiotechnologyUniversity of SheffieldFirth CourtWestern BankSheffieldUK
- Department of Chemical and Biological EngineeringChELSI InstituteUniversity of SheffieldSheffieldUK
| | - Matthew P. Johnson
- Department of Molecular Biology and BiotechnologyUniversity of SheffieldFirth CourtWestern BankSheffieldUK
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5
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Johnson MP, Wientjes E. The relevance of dynamic thylakoid organisation to photosynthetic regulation. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2019; 1861:148039. [PMID: 31228404 DOI: 10.1016/j.bbabio.2019.06.011] [Citation(s) in RCA: 40] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2019] [Revised: 06/14/2019] [Accepted: 06/15/2019] [Indexed: 12/11/2022]
Abstract
The higher plant chloroplast thylakoid membrane system performs the light-dependent reactions of photosynthesis. These provide the ATP and NADPH required for the fixation of CO2 into biomass by the Calvin-Benson cycle and a range of other metabolic reactions in the stroma. Land plants are frequently challenged by fluctuations in their environment, such as light, nutrient and water availability, which can create a mismatch between the amounts of ATP and NADPH produced and the amounts required by the downstream metabolism. Left unchecked, such imbalances can lead to the production of reactive oxygen species that damage the plant and harm productivity. Fortunately, plants have evolved a complex range of regulatory processes to avoid or minimize such deleterious effects by controlling the efficiency of light harvesting and electron transfer in the thylakoid membrane. Generally the regulation of the light reactions has been studied and conceptualised at the microscopic level of protein-protein and protein-ligand interactions, however in recent years dynamic changes in the thylakoid macrostructure itself have been recognised to play a significant role in regulating light harvesting and electron transfer. Here we review the evidence for the involvement of macrostructural changes in photosynthetic regulation and review the techniques that brought this evidence to light.
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Affiliation(s)
- Matthew P Johnson
- Department of Molecular Biology and Biotechnology, University of Sheffield, Sheffield S10 2TN, United Kingdom.
| | - Emilie Wientjes
- Laboratory of Biophysics, Wageningen University, Stippeneng 4, 6708 WE Wageningen, the Netherlands
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6
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Tamary E, Nevo R, Naveh L, Levin‐Zaidman S, Kiss V, Savidor A, Levin Y, Eyal Y, Reich Z, Adam Z. Chlorophyll catabolism precedes changes in chloroplast structure and proteome during leaf senescence. PLANT DIRECT 2019; 3:e00127. [PMID: 31245770 PMCID: PMC6508775 DOI: 10.1002/pld3.127] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/09/2019] [Revised: 02/25/2019] [Accepted: 02/26/2019] [Indexed: 05/18/2023]
Abstract
The earliest visual changes of leaf senescence occur in the chloroplast as chlorophyll is degraded and photosynthesis declines. Yet, a comprehensive understanding of the sequence of catabolic events occurring in chloroplasts during natural leaf senescence is still missing. Here, we combined confocal and electron microscopy together with proteomics and biochemistry to follow structural and molecular changes during Arabidopsis leaf senescence. We observed that initiation of chlorophyll catabolism precedes other breakdown processes. Chloroplast size, stacking of thylakoids, and efficiency of PSII remain stable until late stages of senescence, whereas the number and size of plastoglobules increase. Unlike catabolic enzymes, whose level increase, the level of most proteins decreases during senescence, and chloroplast proteins are overrepresented among these. However, the rate of their disappearance is variable, mostly uncoordinated and independent of their inherent stability during earlier developmental stages. Unexpectedly, degradation of chlorophyll-binding proteins lags behind chlorophyll catabolism. Autophagy and vacuole proteins are retained at relatively high levels, highlighting the role of extra-plastidic degradation processes especially in late stages of senescence. The observation that chlorophyll catabolism precedes all other catabolic events may suggest that this process enables or signals further catabolic processes in chloroplasts.
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Affiliation(s)
- Eyal Tamary
- The Robert H. Smith Institute of Plant Sciences and Genetics in AgricultureThe Hebrew UniversityRehovotIsrael
| | - Reinat Nevo
- Department of Biomolecular SciencesWeizmann Institute of ScienceRehovotIsrael
| | - Leah Naveh
- The Robert H. Smith Institute of Plant Sciences and Genetics in AgricultureThe Hebrew UniversityRehovotIsrael
| | - Smadar Levin‐Zaidman
- Department of Chemical Research SupportWeizmann Institute of ScienceRehovotIsrael
| | - Vladimir Kiss
- Department of Biomolecular SciencesWeizmann Institute of ScienceRehovotIsrael
| | - Alon Savidor
- de Botton Institute for Protein ProfilingThe Nancy and Stephen Grand Israel National Center for Personalized MedicineWeizmann Institute of ScienceRehovotIsrael
| | - Yishai Levin
- de Botton Institute for Protein ProfilingThe Nancy and Stephen Grand Israel National Center for Personalized MedicineWeizmann Institute of ScienceRehovotIsrael
| | - Yoram Eyal
- Institute of Plant SciencesThe Volcani Center ARORishon LeZionIsrael
| | - Ziv Reich
- Department of Biomolecular SciencesWeizmann Institute of ScienceRehovotIsrael
| | - Zach Adam
- The Robert H. Smith Institute of Plant Sciences and Genetics in AgricultureThe Hebrew UniversityRehovotIsrael
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7
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Schwarz EM, Tietz S, Froehlich JE. Photosystem I-LHCII megacomplexes respond to high light and aging in plants. PHOTOSYNTHESIS RESEARCH 2018; 136:107-124. [PMID: 28975583 PMCID: PMC5851685 DOI: 10.1007/s11120-017-0447-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/11/2017] [Accepted: 09/21/2017] [Indexed: 05/18/2023]
Abstract
Photosystem II is known to be a highly dynamic multi-protein complex that participates in a variety of regulatory and repair processes. In contrast, photosystem I (PSI) has, until quite recently, been thought of as relatively static. We report the discovery of plant PSI-LHCII megacomplexes containing multiple LHCII trimers per PSI reaction center. These PSI-LHCII megacomplexes respond rapidly to changes in light intensity, as visualized by native gel electrophoresis. PSI-LHCII megacomplex formation was found to require thylakoid stacking, and to depend upon growth light intensity and leaf age. These factors were, in turn, correlated with changes in PSI/PSII ratios and, intriguingly, PSI-LHCII megacomplex dynamics appeared to depend upon PSII core phosphorylation. These findings suggest new functions for PSI and a new level of regulation involving specialized subpopulations of photosystem I which have profound implications for current models of thylakoid dynamics.
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Affiliation(s)
- Eliezer M Schwarz
- Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI, 48824, USA.
| | - Stephanie Tietz
- Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI, 48824, USA
| | - John E Froehlich
- Department of Energy Plant Research Laboratory, Michigan State University, East Lansing, MI, 48824, USA
- Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, MI, 48824, USA
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8
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Albanese P, Melero R, Engel BD, Grinzato A, Berto P, Manfredi M, Chiodoni A, Vargas J, Sorzano CÓS, Marengo E, Saracco G, Zanotti G, Carazo JM, Pagliano C. Pea PSII-LHCII supercomplexes form pairs by making connections across the stromal gap. Sci Rep 2017; 7:10067. [PMID: 28855679 PMCID: PMC5577252 DOI: 10.1038/s41598-017-10700-8] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/18/2017] [Accepted: 08/14/2017] [Indexed: 12/30/2022] Open
Abstract
In higher plant thylakoids, the heterogeneous distribution of photosynthetic protein complexes is a determinant for the formation of grana, stacks of membrane discs that are densely populated with Photosystem II (PSII) and its light harvesting complex (LHCII). PSII associates with LHCII to form the PSII-LHCII supercomplex, a crucial component for solar energy conversion. Here, we report a biochemical, structural and functional characterization of pairs of PSII-LHCII supercomplexes, which were isolated under physiologically-relevant cation concentrations. Using single-particle cryo-electron microscopy, we determined the three-dimensional structure of paired C2S2M PSII-LHCII supercomplexes at 14 Å resolution. The two supercomplexes interact on their stromal sides through a specific overlap between apposing LHCII trimers and via physical connections that span the stromal gap, one of which is likely formed by interactions between the N-terminal loops of two Lhcb4 monomeric LHCII subunits. Fast chlorophyll fluorescence induction analysis showed that paired PSII-LHCII supercomplexes are energetically coupled. Molecular dynamics simulations revealed that additional flexible physical connections may form between the apposing LHCII trimers of paired PSII-LHCII supercomplexes in appressed thylakoid membranes. Our findings provide new insights into how interactions between pairs of PSII-LHCII supercomplexes can link adjacent thylakoids to mediate the stacking of grana membranes.
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Affiliation(s)
- Pascal Albanese
- Applied Science and Technology Department-BioSolar Lab, Politecnico di Torino, Viale T. Michel 5, 15121, Alessandria, Italy
- Department of Biology, University of Padova, Via Ugo Bassi 58 B, 35121, Padova, Italy
| | - Roberto Melero
- Biocomputing Unit, Centro Nacional de Biotecnología-CSIC, Darwin 3, Cantoblanco, 28049, Madrid, Spain
| | - Benjamin D Engel
- Department of Molecular Structural Biology, Max Planck Institute of Biochemistry, 82152, Martinsried, Germany
| | - Alessandro Grinzato
- Department of Biomedical Sciences, University of Padova, Via Ugo Bassi 58 B, 35121, Padova, Italy
| | - Paola Berto
- Department of Biomedical Sciences, University of Padova, Via Ugo Bassi 58 B, 35121, Padova, Italy
| | - Marcello Manfredi
- ISALIT-Department of Science and Technological Innovation, University of Eastern Piedmont, Viale T. Michel 11, 15121, Alessandria, Italy
- Department of Science and Technological Innovation, University of Eastern Piedmont, Viale T. Michel 11, 15121, Alessandria, Italy
| | - Angelica Chiodoni
- Center for Sustainable Future Technologies - CSFT@POLITO, Istituto Italiano di Tecnologia, Corso Trento 21, 10129, Torino, Italy
| | - Javier Vargas
- Biocomputing Unit, Centro Nacional de Biotecnología-CSIC, Darwin 3, Cantoblanco, 28049, Madrid, Spain
| | | | - Emilio Marengo
- Department of Science and Technological Innovation, University of Eastern Piedmont, Viale T. Michel 11, 15121, Alessandria, Italy
| | - Guido Saracco
- Center for Sustainable Future Technologies - CSFT@POLITO, Istituto Italiano di Tecnologia, Corso Trento 21, 10129, Torino, Italy
| | - Giuseppe Zanotti
- Department of Biomedical Sciences, University of Padova, Via Ugo Bassi 58 B, 35121, Padova, Italy
| | - Jose-Maria Carazo
- Biocomputing Unit, Centro Nacional de Biotecnología-CSIC, Darwin 3, Cantoblanco, 28049, Madrid, Spain
| | - Cristina Pagliano
- Applied Science and Technology Department-BioSolar Lab, Politecnico di Torino, Viale T. Michel 5, 15121, Alessandria, Italy.
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9
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Dumas L, Chazaux M, Peltier G, Johnson X, Alric J. Cytochrome b 6 f function and localization, phosphorylation state of thylakoid membrane proteins and consequences on cyclic electron flow. PHOTOSYNTHESIS RESEARCH 2016; 129:307-320. [PMID: 27534565 DOI: 10.1007/s11120-016-0298-y] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2016] [Accepted: 07/27/2016] [Indexed: 06/06/2023]
Abstract
Both the structure and the protein composition of thylakoid membranes have an impact on light harvesting and electron transfer in the photosynthetic chain. Thylakoid membranes form stacks and lamellae where photosystem II and photosystem I localize, respectively. Light-harvesting complexes II can be associated to either PSII or PSI depending on the redox state of the plastoquinone pool, and their distribution is governed by state transitions. Upon state transitions, the thylakoid ultrastructure and lateral distribution of proteins along the membrane are subject to significant rearrangements. In addition, quinone diffusion is limited to membrane microdomains and the cytochrome b 6 f complex localizes either to PSII-containing grana stacks or PSI-containing stroma lamellae. Here, we discuss possible similarities or differences between green algae and C3 plants on the functional consequences of such heterogeneities in the photosynthetic electron transport chain and propose a model in which quinones, accepting electrons either from PSII (linear flow) or NDH/PGR pathways (cyclic flow), represent a crucial control point. Our aim is to give an integrated description of these processes and discuss their potential roles in the balance between linear and cyclic electron flows.
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Affiliation(s)
- Louis Dumas
- Laboratory of Microalgal and Bacterial Bioenergetics and Biotechnology, CEA Cadarache, CNRS, Aix-Marseille Université, UMR7161 BIAM - LB3M, 13108, Saint-Paul-lez-Durance, France
| | - Marie Chazaux
- Laboratory of Microalgal and Bacterial Bioenergetics and Biotechnology, CEA Cadarache, CNRS, Aix-Marseille Université, UMR7161 BIAM - LB3M, 13108, Saint-Paul-lez-Durance, France
| | - Gilles Peltier
- Laboratory of Microalgal and Bacterial Bioenergetics and Biotechnology, CEA Cadarache, CNRS, Aix-Marseille Université, UMR7161 BIAM - LB3M, 13108, Saint-Paul-lez-Durance, France
| | - Xenie Johnson
- Laboratory of Microalgal and Bacterial Bioenergetics and Biotechnology, CEA Cadarache, CNRS, Aix-Marseille Université, UMR7161 BIAM - LB3M, 13108, Saint-Paul-lez-Durance, France
| | - Jean Alric
- Laboratory of Microalgal and Bacterial Bioenergetics and Biotechnology, CEA Cadarache, CNRS, Aix-Marseille Université, UMR7161 BIAM - LB3M, 13108, Saint-Paul-lez-Durance, France.
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10
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Liu J, Zhou W, Liu G, Yang C, Sun Y, Wu W, Cao S, Wang C, Hai G, Wang Z, Bock R, Huang J, Cheng Y. The conserved endoribonuclease YbeY is required for chloroplast ribosomal RNA processing in Arabidopsis. PLANT PHYSIOLOGY 2015; 168:205-21. [PMID: 25810095 PMCID: PMC4424013 DOI: 10.1104/pp.114.255000] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2014] [Accepted: 03/23/2015] [Indexed: 05/20/2023]
Abstract
Maturation of chloroplast ribosomal RNAs (rRNAs) comprises several endoribonucleolytic and exoribonucleolytic processing steps. However, little is known about the specific enzymes involved and the cleavage steps they catalyze. Here, we report the functional characterization of the single Arabidopsis (Arabidopsis thaliana) gene encoding a putative YbeY endoribonuclease. AtYbeY null mutants are seedling lethal, indicating that AtYbeY function is essential for plant growth. Knockdown plants display slow growth and show pale-green leaves. Physiological and ultrastructural analyses of atybeY mutants revealed impaired photosynthesis and defective chloroplast development. Fluorescent microcopy analysis showed that, when fused with the green fluorescence protein, AtYbeY is localized in chloroplasts. Immunoblot and RNA gel-blot assays revealed that the levels of chloroplast-encoded subunits of photosynthetic complexes are reduced in atybeY mutants, but the corresponding transcripts accumulate normally. In addition, atybeY mutants display defective maturation of both the 5' and 3' ends of 16S, 23S, and 4.5S rRNAs as well as decreased accumulation of mature transcripts from the transfer RNA genes contained in the chloroplast rRNA operon. Consequently, mutant plants show a severe deficiency in ribosome biogenesis, which, in turn, results in impaired plastid translational activity. Furthermore, biochemical assays show that recombinant AtYbeY is able to cleave chloroplast rRNAs as well as messenger RNAs and transfer RNAs in vitro. Taken together, our findings indicate that AtYbeY is a chloroplast-localized endoribonuclease that is required for chloroplast rRNA processing and thus for normal growth and development.
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Affiliation(s)
- Jinwen Liu
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China (J.L., G.L., C.Y., S.C., C.W., G.H., Z.W., Y.C.);College of Life Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, China (J.L.);National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Science, Chinese Academy of Sciences, Shanghai 200032, China (W.Z., Y.S., W.W., J.H.); andMax-Planck-Institut für Molekulare Pflanzenphysiologie, D-14476 Potsdam-Golm, Germany (R.B.)
| | - Wenbin Zhou
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China (J.L., G.L., C.Y., S.C., C.W., G.H., Z.W., Y.C.);College of Life Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, China (J.L.);National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Science, Chinese Academy of Sciences, Shanghai 200032, China (W.Z., Y.S., W.W., J.H.); andMax-Planck-Institut für Molekulare Pflanzenphysiologie, D-14476 Potsdam-Golm, Germany (R.B.)
| | - Guifeng Liu
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China (J.L., G.L., C.Y., S.C., C.W., G.H., Z.W., Y.C.);College of Life Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, China (J.L.);National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Science, Chinese Academy of Sciences, Shanghai 200032, China (W.Z., Y.S., W.W., J.H.); andMax-Planck-Institut für Molekulare Pflanzenphysiologie, D-14476 Potsdam-Golm, Germany (R.B.)
| | - Chuanping Yang
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China (J.L., G.L., C.Y., S.C., C.W., G.H., Z.W., Y.C.);College of Life Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, China (J.L.);National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Science, Chinese Academy of Sciences, Shanghai 200032, China (W.Z., Y.S., W.W., J.H.); andMax-Planck-Institut für Molekulare Pflanzenphysiologie, D-14476 Potsdam-Golm, Germany (R.B.)
| | - Yi Sun
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China (J.L., G.L., C.Y., S.C., C.W., G.H., Z.W., Y.C.);College of Life Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, China (J.L.);National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Science, Chinese Academy of Sciences, Shanghai 200032, China (W.Z., Y.S., W.W., J.H.); andMax-Planck-Institut für Molekulare Pflanzenphysiologie, D-14476 Potsdam-Golm, Germany (R.B.)
| | - Wenjuan Wu
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China (J.L., G.L., C.Y., S.C., C.W., G.H., Z.W., Y.C.);College of Life Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, China (J.L.);National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Science, Chinese Academy of Sciences, Shanghai 200032, China (W.Z., Y.S., W.W., J.H.); andMax-Planck-Institut für Molekulare Pflanzenphysiologie, D-14476 Potsdam-Golm, Germany (R.B.)
| | - Shenquan Cao
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China (J.L., G.L., C.Y., S.C., C.W., G.H., Z.W., Y.C.);College of Life Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, China (J.L.);National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Science, Chinese Academy of Sciences, Shanghai 200032, China (W.Z., Y.S., W.W., J.H.); andMax-Planck-Institut für Molekulare Pflanzenphysiologie, D-14476 Potsdam-Golm, Germany (R.B.)
| | - Chong Wang
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China (J.L., G.L., C.Y., S.C., C.W., G.H., Z.W., Y.C.);College of Life Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, China (J.L.);National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Science, Chinese Academy of Sciences, Shanghai 200032, China (W.Z., Y.S., W.W., J.H.); andMax-Planck-Institut für Molekulare Pflanzenphysiologie, D-14476 Potsdam-Golm, Germany (R.B.)
| | - Guanghui Hai
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China (J.L., G.L., C.Y., S.C., C.W., G.H., Z.W., Y.C.);College of Life Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, China (J.L.);National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Science, Chinese Academy of Sciences, Shanghai 200032, China (W.Z., Y.S., W.W., J.H.); andMax-Planck-Institut für Molekulare Pflanzenphysiologie, D-14476 Potsdam-Golm, Germany (R.B.)
| | - Zhifeng Wang
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China (J.L., G.L., C.Y., S.C., C.W., G.H., Z.W., Y.C.);College of Life Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, China (J.L.);National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Science, Chinese Academy of Sciences, Shanghai 200032, China (W.Z., Y.S., W.W., J.H.); andMax-Planck-Institut für Molekulare Pflanzenphysiologie, D-14476 Potsdam-Golm, Germany (R.B.)
| | - Ralph Bock
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China (J.L., G.L., C.Y., S.C., C.W., G.H., Z.W., Y.C.);College of Life Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, China (J.L.);National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Science, Chinese Academy of Sciences, Shanghai 200032, China (W.Z., Y.S., W.W., J.H.); andMax-Planck-Institut für Molekulare Pflanzenphysiologie, D-14476 Potsdam-Golm, Germany (R.B.)
| | - Jirong Huang
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China (J.L., G.L., C.Y., S.C., C.W., G.H., Z.W., Y.C.);College of Life Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, China (J.L.);National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Science, Chinese Academy of Sciences, Shanghai 200032, China (W.Z., Y.S., W.W., J.H.); andMax-Planck-Institut für Molekulare Pflanzenphysiologie, D-14476 Potsdam-Golm, Germany (R.B.)
| | - Yuxiang Cheng
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China (J.L., G.L., C.Y., S.C., C.W., G.H., Z.W., Y.C.);College of Life Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, China (J.L.);National Key Laboratory of Plant Molecular Genetics, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Science, Chinese Academy of Sciences, Shanghai 200032, China (W.Z., Y.S., W.W., J.H.); andMax-Planck-Institut für Molekulare Pflanzenphysiologie, D-14476 Potsdam-Golm, Germany (R.B.)
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Casanova-Sáez R, Mateo-Bonmatí E, Kangasjärvi S, Candela H, Micol JL. Arabidopsis ANGULATA10 is required for thylakoid biogenesis and mesophyll development. JOURNAL OF EXPERIMENTAL BOTANY 2014; 65:2391-404. [PMID: 24663344 PMCID: PMC4036511 DOI: 10.1093/jxb/eru131] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/10/2023]
Abstract
The chloroplasts of land plants contain internal membrane systems, the thylakoids, which are arranged in stacks called grana. Because grana have not been found in Cyanobacteria, the evolutionary origin of genes controlling the structural and functional diversification of thylakoidal membranes in land plants remains unclear. The angulata10-1 (anu10-1) mutant, which exhibits pale-green rosettes, reduced growth, and deficient leaf lateral expansion, resulting in the presence of prominent marginal teeth, was isolated. Palisade cells in anu10-1 are larger and less packed than in the wild type, giving rise to large intercellular spaces. The ANU10 gene encodes a protein of unknown function that localizes to both chloroplasts and amyloplasts. In chloroplasts, ANU10 associates with thylakoidal membranes. Mutant anu10-1 chloroplasts accumulate H2O2, and have reduced levels of chlorophyll and carotenoids. Moreover, these chloroplasts are small and abnormally shaped, thylakoidal membranes are less abundant, and their grana are absent due to impaired thylakoid stacking in the anu10-1 mutant. Because the trimeric light-harvesting complex II (LHCII) has been reported to be required for thylakoid stacking, its levels were determined in anu10-1 thylakoids and they were found to be reduced. Together, the data point to a requirement for ANU10 for chloroplast and mesophyll development.
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Affiliation(s)
- Rubén Casanova-Sáez
- Instituto de Bioingeniería, Universidad Miguel Hernández, Campus de Elche, 03202 Elche, Alicante, Spain
| | - Eduardo Mateo-Bonmatí
- Instituto de Bioingeniería, Universidad Miguel Hernández, Campus de Elche, 03202 Elche, Alicante, Spain
| | - Saijaliisa Kangasjärvi
- Department of Biochemistry and Food Chemistry, University of Turku, FI-20014 Turku, Finland
| | - Héctor Candela
- Instituto de Bioingeniería, Universidad Miguel Hernández, Campus de Elche, 03202 Elche, Alicante, Spain
| | - José Luis Micol
- Instituto de Bioingeniería, Universidad Miguel Hernández, Campus de Elche, 03202 Elche, Alicante, Spain
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Pribil M, Labs M, Leister D. Structure and dynamics of thylakoids in land plants. JOURNAL OF EXPERIMENTAL BOTANY 2014; 65:1955-72. [PMID: 24622954 DOI: 10.1093/jxb/eru090] [Citation(s) in RCA: 173] [Impact Index Per Article: 17.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
Thylakoids of land plants have a bipartite structure, consisting of cylindrical grana stacks, made of membranous discs piled one on top of the other, and stroma lamellae which are helically wound around the cylinders. Protein complexes predominantly located in the stroma lamellae and grana end membranes are either bulky [photosystem I (PSI) and the chloroplast ATP synthase (cpATPase)] or are involved in cyclic electron flow [the NAD(P)H dehydrogenase (NDH) and PGRL1-PGR5 heterodimers], whereas photosystem II (PSII) and its light-harvesting complex (LHCII) are found in the appressed membranes of the granum. Stacking of grana is thought to be due to adhesion between Lhcb proteins (LHCII or CP26) located in opposed thylakoid membranes. The grana margins contain oligomers of CURT1 proteins, which appear to control the size and number of grana discs in a dosage- and phosphorylation-dependent manner. Depending on light conditions, thylakoid membranes undergo dynamic structural changes that involve alterations in granum diameter and height, vertical unstacking of grana, and swelling of the thylakoid lumen. This plasticity is realized predominantly by reorganization of the supramolecular structure of protein complexes within grana stacks and by changes in multiprotein complex composition between appressed and non-appressed membrane domains. Reversible phosphorylation of LHC proteins (LHCPs) and PSII components appears to initiate most of the underlying regulatory mechanisms. An update on the roles of lipids, proteins, and protein complexes, as well as possible trafficking mechanisms, during thylakoid biogenesis and the de-etiolation process complements this review.
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Affiliation(s)
- Mathias Pribil
- Plant Molecular Biology, Department of Biology, Ludwig-Maximilians-University Munich (LMU), D-82152 Planegg-Martinsried, Germany
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Wan T, Li M, Zhao X, Zhang J, Liu Z, Chang W. Crystal structure of a multilayer packed major light-harvesting complex: implications for grana stacking in higher plants. MOLECULAR PLANT 2014; 7:916-919. [PMID: 24482437 DOI: 10.1093/mp/ssu005] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/03/2023]
Affiliation(s)
- Tao Wan
- National Laboratory of Biomacromolecules, Institute of Biophysics, Chinese Academy of Sciences, 15th Datun Road, Chaoyang District, Beijing, 100101, People's Republic of China
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Nevo R, Charuvi D, Tsabari O, Reich Z. Composition, architecture and dynamics of the photosynthetic apparatus in higher plants. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2012; 70:157-76. [PMID: 22449050 DOI: 10.1111/j.1365-313x.2011.04876.x] [Citation(s) in RCA: 102] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/07/2023]
Abstract
The process of oxygenic photosynthesis enabled and still sustains aerobic life on Earth. The most elaborate form of the apparatus that carries out the primary steps of this vital process is the one present in higher plants. Here, we review the overall composition and supramolecular organization of this apparatus, as well as the complex architecture of the lamellar system within which it is harbored. Along the way, we refer to the genetic, biochemical, spectroscopic and, in particular, microscopic studies that have been employed to elucidate the structure and working of this remarkable molecular energy conversion device. As an example of the highly dynamic nature of the apparatus, we discuss the molecular and structural events that enable it to maintain high photosynthetic yields under fluctuating light conditions. We conclude the review with a summary of the hypotheses made over the years about the driving forces that underlie the partition of the lamellar system of higher plants and certain green algae into appressed and non-appressed membrane domains and the segregation of the photosynthetic protein complexes within these domains.
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Affiliation(s)
- Reinat Nevo
- Department of Biological Chemistry, Weizmann Institute of Science, Rehovot, Israel
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Cui YL, Jia QS, Yin QQ, Lin GN, Kong MM, Yang ZN. The GDC1 gene encodes a novel ankyrin domain-containing protein that is essential for grana formation in Arabidopsis. PLANT PHYSIOLOGY 2011; 155:130-41. [PMID: 21098677 PMCID: PMC3075748 DOI: 10.1104/pp.110.165589] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
In land-plant chloroplasts, the grana play multiple roles in photosynthesis, including the potential increase of photosynthetic capacity in light and enhancement of photochemical efficiency in shade. However, the molecular mechanisms of grana formation remain elusive. Here, we report a novel gene, Grana-Deficient Chloroplast1 (GDC1), required for chloroplast grana formation in Arabidopsis (Arabidopsis thaliana). In the chloroplast of knockout mutant gdc1-3, only stromal thylakoids were observed, and they could not stack together to form appressed grana. The mutant exhibited seedling lethality with pale green cotyledons and true leaves. Further blue native-polyacrylamide gel electrophoresis analysis indicated that the trimeric forms of Light-Harvesting Complex II (LHCII) were scarcely detected in gdc1-3, confirming previous reports that the LHCII trimer is essential for grana formation. The Lhcb1 protein, the major component of the LHCIIb trimer, was substantially reduced, and another LHCIIb trimer component, Lhcb2, was slightly reduced in the gdc1-3 mutant, although their transcription levels were not altered in the mutant. This suggests that defective LHCII trimer formation in gdc1-3 is due to low amounts of Lhcb1 and Lhcb2. GDC1 encodes a chloroplast protein with an ankyrin domain within the carboxyl terminus. It was highly expressed in Arabidopsis green tissues, and its expression was induced by photosignaling pathways. Immunoblot analysis of the GDC1-green fluorescent protein (GFP) fusion protein in 35S::GDC1-GFP transgenic plants with GFP antibody indicates that GDC1 is associated with an approximately 440-kD thylakoid protein complex instead of the LHCII trimer. This shows that GDC1 may play an indirect role in LHCII trimerization during grana formation.
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Barros T, Kühlbrandt W. Crystallisation, structure and function of plant light-harvesting Complex II. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS 2009; 1787:753-72. [DOI: 10.1016/j.bbabio.2009.03.012] [Citation(s) in RCA: 119] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/21/2009] [Revised: 03/12/2009] [Accepted: 03/13/2009] [Indexed: 11/15/2022]
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Standfuss J, Terwisscha van Scheltinga AC, Lamborghini M, Kühlbrandt W. Mechanisms of photoprotection and nonphotochemical quenching in pea light-harvesting complex at 2.5 A resolution. EMBO J 2005; 24:919-28. [PMID: 15719016 PMCID: PMC554132 DOI: 10.1038/sj.emboj.7600585] [Citation(s) in RCA: 578] [Impact Index Per Article: 30.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2004] [Accepted: 01/26/2005] [Indexed: 11/08/2022] Open
Abstract
The plant light-harvesting complex of photosystem II (LHC-II) collects and transmits solar energy for photosynthesis in chloroplast membranes and has essential roles in regulation of photosynthesis and in photoprotection. The 2.5 A structure of pea LHC-II determined by X-ray crystallography of stacked two-dimensional crystals shows how membranes interact to form chloroplast grana, and reveals the mutual arrangement of 42 chlorophylls a and b, 12 carotenoids and six lipids in the LHC-II trimer. Spectral assignment of individual chlorophylls indicates the flow of energy in the complex and the mechanism of photoprotection in two close chlorophyll a-lutein pairs. We propose a simple mechanism for the xanthophyll-related, slow component of nonphotochemical quenching in LHC-II, by which excess energy is transferred to a zeaxanthin replacing violaxanthin in its binding site, and dissipated as heat. Our structure shows the complex in a quenched state, which may be relevant for the rapid, pH-induced component of nonphotochemical quenching.
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Affiliation(s)
- Jörg Standfuss
- Max Planck Institute of Biophysics, Department of Structural Biology, Frankfurt am Main, Germany
| | | | - Matteo Lamborghini
- Max Planck Institute of Biophysics, Department of Structural Biology, Frankfurt am Main, Germany
| | - Werner Kühlbrandt
- Max Planck Institute of Biophysics, Department of Structural Biology, Frankfurt am Main, Germany
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Ryrie IJ, Young S, Andersson B. Development of the 33-, 23- and 16-kDa polypeptides of the photosynthetic oxygen-evolving system during greening. FEBS Lett 2001. [DOI: 10.1016/0014-5793(84)81297-1] [Citation(s) in RCA: 10] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
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Dobrikova A, Morgan RM, Ivanov AG, Apostolova E, Petkanchin I, Huner NP, Taneva SG. Electric properties of thylakoid membranes from pea mutants with modified carotenoid and chlorophyll-protein complex composition. PHOTOSYNTHESIS RESEARCH 2000; 65:165-74. [PMID: 16228483 DOI: 10.1023/a:1006428631432] [Citation(s) in RCA: 22] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/04/2023]
Abstract
Surface electric properties of thylakoid membranes from wild type and two mutant forms, Coeruleovireus 2/16 and Costata 2/133, of pea are investigated by electric light scattering and microelectrophoretic measurements. Characterization of the chlorophyll-protein complexes in thylakoid membranes reveals that the relative ratio of oligomeric (LHC II(1)) to monomeric (LHC II(3)) forms of the light-harvesting Chl a/b complex of Photosystem II is lower (3.34) in 2/133 mutant and higher (6.62) in 2/16 mutant than in wild type (4.57). This is accompanied by elevated amounts and a considerable reduction of all carotenoids in 2/16 and 2/133 mutant, respectively, as compared to the wild type. The concomitant variations of the permanent dipole moment (transversal charge asymmetry), electric polarizability and electrokinetic charge of the thylakoid membranes from both the mutants are discussed in terms of the differences in the supramolecular (oligomeric) organization of the light-harvesting complexes II within the photosynthetic apparatus.
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Affiliation(s)
- A Dobrikova
- Institute of Biophysics, Bulgarian Academy of Sciences, Sofia, 1113, Bulgaria
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The xanthophyll cycle of higher plants: influence of antenna size and membrane organization. BIOCHIMICA ET BIOPHYSICA ACTA 1998; 1363:47-58. [PMID: 9526041 DOI: 10.1016/s0005-2728(97)00093-5] [Citation(s) in RCA: 38] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
The development of the photosynthetic apparatus of intermittent light grown pea plants under continuous illumination has been investigated. We determined the formation of antenna proteins and the synthesis of pigments at different stages of greening and compared the data with the changes in the xanthophyll cycle reactions. The limited convertibility of violaxanthin in the de-epoxidation reactions of the cycle was found to be closely related to the presence of antenna proteins and could be attributed to direct (pigment binding) and indirect (grana formation) functions of antenna proteins. The reduced epoxidation rate in intermittent light plants was found to be accelerated with increasing amounts of antenna proteins. However, the changes in the epoxidation rates were not consistent with the assignment of the epoxidase activity to LHC II, the major light harvesting complex protein of photosystem II. This interpretation was further supported by an unchanged epoxidase activity in - also LHC II depleted - bundle sheath cells of the C4 plant Sorghum bicolor and stroma fractions of isolated spinach thylakoids. We assume that the basic function of antenna proteins in the xanthophyll cycle of higher plants is mainly related to the binding of the substrate and/or to interactions with the de-epoxidase/epoxidase. By that antenna proteins seem to be responsible for the limited violaxanthin convertibility as well as they are required for highest epoxidation rates. Copyright 1998 Elsevier Science B.V.
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Špunda V, Čajánek M, Ilík P, Kalina J, Nauš J. Appearance of long-wavelength excitation form of chlorophyll a in PS I fluorescence during greening of barley leaves under continuous light. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 1997. [DOI: 10.1016/s1011-1344(97)00042-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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Johnson G, Krieger A. Thermoluminescence as a probe of Photosystem II in intact leaves: Non-photochemical fluorescence quenching in peas grown in an intermittent light regime. PHOTOSYNTHESIS RESEARCH 1994; 41:371-379. [PMID: 24310151 DOI: 10.1007/bf02183039] [Citation(s) in RCA: 11] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/10/1993] [Accepted: 04/05/1994] [Indexed: 06/02/2023]
Abstract
We have measured thermoluminescence (TL) and chlorophyll fluorescence from leaves of peas grown under an intermittent light regime (IML) and followed changes in those leaves during greening. IML peas show low variable fluorescence and a certain capacity for reversible non-photochemical quenching. It has been suggested that reversible quenching may be caused by pH-dependent release of Ca(2+) from Photosystem II (PS II) (Krieger and Weis (1992) Photosynthetica 27: 89-98). Under conditions in which reversible non-photochemical quenching occurs, a TL band at around 50 °C is observed, in the presence of DCMU, in IML leaves. A band in this temperature range has previously been observed in PS II depleted of Ca(2+) (Ono and Inoue (1989) Biochimica et Biophysica Acta 973: 443-449). The 50 °C band disappears upon dark adaptation. In mature leaves, no significant band is seen at 50 °C. It is concluded that, in IML leaves, reversible quenching may be related to the release of Ca(2+) from Photosystem II. However, it seems that in the mature system, under most conditions, such release does not contribute significantly to quenching.
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Affiliation(s)
- G Johnson
- Section de Bioénergetique, DBCM (CNRS URA 1290) Bât 532, C.E.A.-Saclay, 91191, Gif-sur-Yvette, Cedex, France
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Jahns P, Junge W. ANOTHER ROLE OF CHLOROPHYLL a/b BINDING PROTEINS OF HIGHER PLANTS: THEY MODULATE PROTOLYTIC REACTIONS ASSOCIATED WITH PHOTOSYSTEM II. Photochem Photobiol 1993. [DOI: 10.1111/j.1751-1097.1993.tb02266.x] [Citation(s) in RCA: 9] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Bassi R, Rigoni F, Giacometti GM. CHLOROPHYLL BINDING PROTEINS WITH ANTENNA FUNCTION IN HIGHER PLANTS and GREEN ALGAE. Photochem Photobiol 1990. [DOI: 10.1111/j.1751-1097.1990.tb08457.x] [Citation(s) in RCA: 137] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
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Allen KD, Duysen ME, Staehelin LA. Biogenesis of thylakoid membranes is controlled by light intensity in the conditional chlorophyll b-deficient CD3 mutant of wheat. J Cell Biol 1988; 107:907-19. [PMID: 3047153 PMCID: PMC2115274 DOI: 10.1083/jcb.107.3.907] [Citation(s) in RCA: 39] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
Biogenesis of thylakoid membranes in the conditional chlorophyll b-deficient CD3 mutant of wheat is dramatically altered by relatively small differences in the light intensity under which seedlings are grown. When the CD3 mutant is grown at 400 microE/m2 S (high light, about one-fifth full sunlight) plants are deficient in chlorophyll b (chlorophyll a/b ratio greater than 6.0) and lack or contain greatly reduced amounts of the chlorophyll a/b-binding complexes CPII/CPII (mobile or peripheral LHCII), CP29, CP24 and LHCI, as shown by mildly denaturing 'green gel' electrophoresis, by fully denaturing SDS-PAGE, and by Western blot analysis. High light CD3 chloroplasts display an unusual morphology characterized by large, sheet-like stromal thylakoids formed into parallel unstacked arrays and a limited number of small grana stacks displaced toward the edges of the arrays. Changes in the supramolecular organization of CD3 thylakoids, seen with freeze-fracture electron microscopy, include a reduction in the size of EFs particles, which correspond to photosystem II centers with variable amounts of attached LHCII, and a redistribution of EF particles from the stacked to the unstacked regions. When CD3 seedlings are grown at 150 microE/m2 S (low light) there is a substantial reversal of all of these effects. Thus, chlorophyll b and the chlorophyll a/b-binding proteins accumulate to near wild-type levels (chlorophyll a/b ratio = 3.5-4.5) and thylakoid morphology is more nearly wild type in appearance. Growth of the CD3 mutant in the presence of chloramphenicol stimulates the accumulation of chlorophyll b and its binding proteins (Duysen, M. E., T. P. Freeman, N. D. Williams, and L. L. Huckle. 1985. Plant Physiol. 78:531-536). We show that this partial rescue of the CD3 high light phenotype is accompanied by large changes in thylakoid structure. The CD3 mutant, which defines a new class of chlorophyll b-deficient phenotype, is discussed in the more general context of chlorophyll b deficiency.
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Affiliation(s)
- K D Allen
- Department of Molecular, Cellular and Develpmental Biology, University of Colorado, Boulder 80309
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Chitnis PR, Thornber JP. The major light-harvesting complex of Photosystem II: aspects of its molecular and cell biology. PHOTOSYNTHESIS RESEARCH 1988; 16:41-63. [PMID: 24430991 DOI: 10.1007/bf00039485] [Citation(s) in RCA: 59] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/27/1987] [Accepted: 11/30/1987] [Indexed: 06/03/2023]
Abstract
The light-harvesting complex of photosystem II (LHC II) contains one major (LHC IIb) and at least three minor chlorophyll-protein components. The apoproteins of LHC IIb (LHCP) are encoded by nuclear genes and synthesized in the cytoplasm as a higher molecular weight precursor(s) (pLHCP). Several genes coding for pLHCP have been cloned from various higher plant species. The expression of these genes is dependent upon a variety of factors such as light, the developmental stage of the plastids and the plant. After its synthesis in the cytoplasm, pLHCP is imported into plastids, inserted into thylakoids, processed to its mature form, and assembled into LHC IIb. The pathway of assembly of LHC IIb in the thylakoid membranes is currently being investigated in several laboratories. We present a model that gives some details of the steps in the assembly process. Many of the steps involved in the synthesis and assembly are dependent on light and the stage of plastid development.
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Affiliation(s)
- P R Chitnis
- Biology Department and Molecular Biology Institute, University of California, 90024, Los Angeles, CA, USA
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Sutton A, Sieburth LE, Bennett J. Light-dependent accumulation and localization of photosystem II proteins in maize. EUROPEAN JOURNAL OF BIOCHEMISTRY 1987; 164:571-8. [PMID: 3552671 DOI: 10.1111/j.1432-1033.1987.tb11165.x] [Citation(s) in RCA: 26] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
We have raised antibodies against several major components of photosystem II. These antisera, which are directed against the apoproteins of two chlorophyll-binding proteins (CPa-1 and CPa-2), the apoprotein of light-harvesting complex II and the 33-kDa extrinsic protein of the oxygen-evolving complex, were used to examine the light regulation of photosystem II assembly in maize. The principal findings of this study are as follows. The 33-kDa protein is present in dark-grown maize and the content increases 5-10-fold upon illumination. The level of the protein is mediated at least in part by phytochrome and is independent of the accumulation of chlorophyll. In contrast, none of the three chlorophyll-binding proteins examined was detectable in leaves of maize grown in darkness or under other light regimes where chlorophyll does not accumulate. Even in the absence of photosystem II assembly, the 33-kDa protein is properly transported across the thylakoid into the lumen. However, the protein does not attach in the normal way to the inner surface of the membrane under these conditions.
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Darr SC, Arntzen CJ. Reconstitution of the Light Harvesting Chlorophyll a/b Pigment-Protein Complex into Developing Chloroplast Membranes Using a Dialyzable Detergent. PLANT PHYSIOLOGY 1986; 80:931-7. [PMID: 16664744 PMCID: PMC1075232 DOI: 10.1104/pp.80.4.931] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/09/2023]
Abstract
Conditions were developed to isolate the light-harvesting chlorophyll-protein complex serving photosystem II (LHC-II) using a dialyzable detergent, octylpolyoxyethylene. This LHC-II was successfully reconstituted into partially developed chloroplast thylakoids of Hordeum vulgare var Morex (barley) seedlings which were deficient in LHC-II. Functional association of LHC-II with the photosystem II (PSII) core complex was measured by two independent functional assays of PSII sensitization by LHC-II. A 3-fold excess of reconstituted LHC-II was required to equal the activity of LHC developing in vivo. We suggest that a linker component may be absent in the partially developed membranes which is required for specific association of the PSII core complex and LHC-II.
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Affiliation(s)
- S C Darr
- MSU/DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan 48824
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