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Maggiori C, Fernández-Martínez MA, Bourdages LJ, Sánchez-García L, Moreno-Paz M, Sobrado JM, Carrizo D, Vicente-Retortillo Á, Goordial J, Whyte LG. Biosignature Detection and MinION Sequencing of Antarctic Cryptoendoliths After Exposure to Mars Simulation Conditions. ASTROBIOLOGY 2024; 24:44-60. [PMID: 38153386 DOI: 10.1089/ast.2023.0025] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/29/2023]
Abstract
In the search for life in our Solar System, Mars remains a promising target based on its proximity and similarity to Earth. When Mars transitioned from a warmer, wetter climate to its current dry and freezing conditions, any putative extant life probably retreated into habitable refugia such as the subsurface or the interior of rocks. Terrestrial cryptoendolithic microorganisms (i.e., those inhabiting rock interiors) thus represent possible modern-day Mars analogs, particularly those from the hyperarid McMurdo Dry Valleys in Antarctica. As DNA is a strong definitive biosignature, given that there is no known abiotic chemistry that can polymerize nucleobases, we investigated DNA detection with MinION sequencing in Antarctic cryptoendoliths after an ∼58-sol exposure in MARTE, a Mars environmental chamber capable of simulating martian temperature, pressure, humidity, ultraviolet (UV) radiation, and atmospheric composition, in conjunction with protein and lipid detection. The MARTE conditions resulted in changes in community composition and DNA, proteins, and cell membrane-derived lipids remained detectable postexposure. Of the multitude of extreme environmental conditions on Mars, UV radiation (specifically UVC) is the most destructive to both cells and DNA. As such, we further investigated if a UVC exposure corresponding to ∼278 martian years would impede DNA detection via MinION sequencing. The MinION was able to successfully detect and sequence DNA after this UVC radiation exposure, suggesting its utility for life detection in future astrobiology missions focused on finding relatively recently exposed biomarkers inside possible martian refugia.
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Affiliation(s)
- Catherine Maggiori
- Department of Biology, Georgetown University, Washington, District of Columbia, USA
| | - Miguel Angel Fernández-Martínez
- Department of Natural Resource Sciences, Faculty of Agricultural and Environmental Sciences, McGill University, Ste. Anne-de-Bellevue, Quebec, Canada
- Department of Ecology, Universidad Autónoma de Madrid, Ciudad Universitaria de Cantoblanco, Madrid, Spain
| | - Louis-Jacques Bourdages
- Department of Natural Resource Sciences, Faculty of Agricultural and Environmental Sciences, McGill University, Ste. Anne-de-Bellevue, Quebec, Canada
| | | | | | | | | | | | - Jacqueline Goordial
- School of Environmental Sciences, University of Guelph, Guelph, Ontario, Canada
| | - Lyle G Whyte
- Department of Natural Resource Sciences, Faculty of Agricultural and Environmental Sciences, McGill University, Ste. Anne-de-Bellevue, Quebec, Canada
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2
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Sánchez-García L, Lezcano MÁ, Carrizo D, Severino R, García-Villadangos M, Cady SL, Warren-Rhodes K, Cabrol NA, Parro V. Assessing siliceous sinter matrices for long-term preservation of lipid biomarkers in opaline sinter deposits analogous to Mars in El Tatio (Chile). THE SCIENCE OF THE TOTAL ENVIRONMENT 2023; 870:161765. [PMID: 36702265 DOI: 10.1016/j.scitotenv.2023.161765] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2022] [Revised: 01/16/2023] [Accepted: 01/18/2023] [Indexed: 06/18/2023]
Abstract
Subaerial hydrothermal systems are of great interest for paleobiology and astrobiology as plausible candidate environments to support the origin of life on Earth that offer a unique and interrelated atmosphere-hydrosphere-lithosphere interface. They harbor extensive sinter deposits of high preservation potential that are promising targets in the search for traces of possible extraterrestrial life on Hesperian Mars. However, long-term quality preservation is paramount for recognizing biosignatures in old samples and there are still significant gaps in our understanding of the impact and extent of taphonomy processes on life fingerprints. Here, we propose a study based on lipid biomarkers -highly resistant cell-membrane components- to investigate the effects of silicification on their preservation in hydrothermal opaline sinter. We explore the lipid biomarkers profile in three sinter deposits of up to ~3000 years from El Tatio, one of the best Martian analogs on Earth. The lipid profile in local living biofilms is used as a fresh counterpart of the fossil biomarkers in the centuries-old sinter deposits to qualitatively assess the taphonomy effects of silicification on the lipid's preservation. Despite the geological alteration, the preserved lipids retained a depleted stable-carbon isotopic fingerprint characteristic of biological sources, result highly relevant for astrobiology. The data allowed us to estimate for the first time the degradation rate of lipid biomarkers in sinter deposits from El Tatio, and to assess the time preservation framework of opaline silica. Auxiliary techniques of higher taxonomic resolution (DNA sequencing and metaproteomics) helped in the reconstruction of the paleobiology. The lipids were the best-preserved biomolecules, whereas the detection of DNA and proteins dropped considerably from 5 cm depth. These findings provide new insights into taphonomy processes affecting life fingerprints in hydrothermal deposits and serves as a useful baseline for assessing the time window for recovering unambiguous signs of past life on Earth and beyond.
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Affiliation(s)
| | | | - Daniel Carrizo
- Centro de Astrobiología (CAB, CSIC-INTA), 28850 Torrejón de Ardoz, Spain
| | - Rita Severino
- Centro de Astrobiología (CAB, CSIC-INTA), 28850 Torrejón de Ardoz, Spain; Dept. of Physics and Mathematics and Automatics, University of Alcalá (UAH), 28805 Alcalá de Henares, Spain
| | | | - Sherry L Cady
- Environmental Molecular Sciences Laboratory, Pacific Northwest National Laboratory, Richland, WA, United States
| | - Kim Warren-Rhodes
- Carl Sagan Center for the Study of Life in the Universe, SETI Institute, CA 94043, United States
| | - Nathalie A Cabrol
- Carl Sagan Center for the Study of Life in the Universe, SETI Institute, CA 94043, United States
| | - Víctor Parro
- Centro de Astrobiología (CAB, CSIC-INTA), 28850 Torrejón de Ardoz, Spain
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Finkel PL, Carrizo D, Parro V, Sánchez-García L. An Overview of Lipid Biomarkers in Terrestrial Extreme Environments with Relevance for Mars Exploration. ASTROBIOLOGY 2023; 23:563-604. [PMID: 36880883 PMCID: PMC10150655 DOI: 10.1089/ast.2022.0083] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Lipid molecules are organic compounds, insoluble in water, and based on carbon-carbon chains that form an integral part of biological cell membranes. As such, lipids are ubiquitous in life on Earth, which is why they are considered useful biomarkers for life detection in terrestrial environments. These molecules display effective membrane-forming properties even under geochemically hostile conditions that challenge most of microbial life, which grants lipids a universal biomarker character suitable for life detection beyond Earth, where a putative biological membrane would also be required. What discriminates lipids from nucleic acids or proteins is their capacity to retain diagnostic information about their biological source in their recalcitrant hydrocarbon skeletons for thousands of millions of years, which is indispensable in the field of astrobiology given the time span that the geological ages of planetary bodies encompass. This work gathers studies that have employed lipid biomarker approaches for paleoenvironmental surveys and life detection purposes in terrestrial environments with extreme conditions: hydrothermal, hyperarid, hypersaline, and highly acidic, among others; all of which are analogous to current or past conditions on Mars. Although some of the compounds discussed in this review may be abiotically synthesized, we focus on those with a biological origin, namely lipid biomarkers. Therefore, along with appropriate complementary techniques such as bulk and compound-specific stable carbon isotope analysis, this work recapitulates and reevaluates the potential of lipid biomarkers as an additional, powerful tool to interrogate whether there is life on Mars, or if there ever was.
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Affiliation(s)
- Pablo L Finkel
- Centro de Astrobiología (CAB), CSIC-INTA, Madrid, Spain
- Department of Physics and Mathematics and Department of Automatics, University of Alcalá, Madrid, Spain
| | | | - Victor Parro
- Centro de Astrobiología (CAB), CSIC-INTA, Madrid, Spain
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Teece BL, Havig JR, George SC, Hamilton TL, Baumgartner RJ, Hartz J, Van Kranendonk MJ. Biogeochemistry of Recently Fossilized Siliceous Hot Spring Sinters from Yellowstone, USA. ASTROBIOLOGY 2023; 23:155-171. [PMID: 36413376 DOI: 10.1089/ast.2022.0012] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Active hot springs are dynamic geobiologically active environments. Heat- and element-enriched fluids form hot spring sinter deposits that are inhabited by microbial and macroscopic eukaryotic communities, but it is unclear how variable heat, fluid circulation, and mineralization within hot spring systems affect the preservation of organic matter in sinters. We present geological, petrographic, and organic geochemical data from fossilized hot spring sinters (<13 Ka) from three distinct hot spring fields of Yellowstone National Park. The aims of this study were to examine the preservation of hydrocarbons and discern whether the hydrocarbons in these samples were derived from in situ communities or transported by hydrothermal fluids. Organic geochemistry reveals the presence of n-alkanes, methylalkanes, hopanes, and other terpanes, and the distribution of methylheptadecanes is compared to published observations of community composition in extant hot springs with similar geochemistry. Unexpectedly, hopanes have a thermally mature signal, and Raman spectroscopy confirms that the kerogen in some samples has nearly reached the oil window, despite never having been buried. Our results suggest that organic matter maturation occurred through below-surface processes in the hotter, deeper parts of the hydrothermal system and that this exogenous material was then transported and emplaced within the sinter.
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Affiliation(s)
- Bronwyn L Teece
- Australian Centre for Astrobiology (ACA), School of Biological, Earth and Environmental Sciences, University of New South Wales Sydney, Sydney, Australia
- Earth and Sustainability Science Research Centre, School of Biological, Earth and Environmental Sciences, University of New South Wales Sydney, Sydney, Australia
| | - Jeff R Havig
- Department of Plant and Microbial Biology, University of Minnesota, St. Paul, Minnesota, USA
- BioTechnology Institute, University of Minnesota, St. Paul, Minnesota, USA
- Department of Earth and Environmental Sciences, University of Minnesota, Minneapolis, Minnesota, USA
| | - Simon C George
- School of Natural Sciences, Macquarie University, Sydney, Australia
| | - Trinity L Hamilton
- Department of Plant and Microbial Biology, University of Minnesota, St. Paul, Minnesota, USA
- BioTechnology Institute, University of Minnesota, St. Paul, Minnesota, USA
| | - Raphael J Baumgartner
- Australian Centre for Astrobiology (ACA), School of Biological, Earth and Environmental Sciences, University of New South Wales Sydney, Sydney, Australia
- Earth and Sustainability Science Research Centre, School of Biological, Earth and Environmental Sciences, University of New South Wales Sydney, Sydney, Australia
- CSIRO Mineral Resources, Kensington, Australia
| | - Julie Hartz
- School of Natural Sciences, Macquarie University, Sydney, Australia
| | - Martin J Van Kranendonk
- Australian Centre for Astrobiology (ACA), School of Biological, Earth and Environmental Sciences, University of New South Wales Sydney, Sydney, Australia
- Earth and Sustainability Science Research Centre, School of Biological, Earth and Environmental Sciences, University of New South Wales Sydney, Sydney, Australia
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5
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Demaret L, Hutchinson IB, Ingley R, Edwards HGM, Fagel N, Compere P, Javaux EJ, Eppe G, Malherbe C. Fe-Rich Fossil Vents as Mars Analog Samples: Identification of Extinct Chimneys in Miocene Marine Sediments Using Raman Spectroscopy, X-Ray Diffraction, and Scanning Electron Microscopy-Energy Dispersive X-Ray Spectroscopy. ASTROBIOLOGY 2022; 22:1081-1098. [PMID: 35704291 DOI: 10.1089/ast.2021.0128] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
Abstract
On Earth, the circulation of Fe-rich fluids in hydrothermal environments leads to characteristic iron mineral deposits, reflecting the pH and redox chemical conditions of the hydrothermal system, and is often associated with chemotroph microorganisms capable of deriving energy from chemical gradients. On Mars, iron-rich hydrothermal sites are considered to be potentially important astrobiological targets for searching evidence of life during exploration missions, such as the Mars 2020 and the ExoMars 2022 missions. In this study, an extinct hydrothermal chimney from the Jaroso hydrothermal system (SE Spain), considered an interesting geodynamic and mineralogical terrestrial analog for Mars, was analyzed using Raman spectroscopy, X-ray diffraction, and scanning electron microscopy coupled with energy dispersive X-ray spectroscopy. The sample consists of a fossil vent in a Miocene shallow-marine sedimentary deposit composed of a marl substrate, an iron-rich chimney pipe, and a central space filled with backfilling deposits and vent condensates. The iron crust is particularly striking due to the combined presence of molecular and morphological indications of a microbial colonization, including mineral microstructures (e.g., stalks, filaments), iron oxyhydroxide phases (altered goethite, ferrihydrite), and organic signatures (carotenoids, organopolymers). The clear identification of pigments by resonance Raman spectroscopy and the preservation of organics in association with iron oxyhydroxides by Raman microimaging demonstrate that the iron crust was indeed colonized by microbial communities. These analyses confirm that Raman spectroscopy is a powerful tool for documenting the habitability of such historical hydrothermal environments. Finally, based on the results obtained, we propose that the ancient iron-rich hydrothermal pipes should be recognized as singular terrestrial Mars analog specimens to support the preparatory work for robotic in situ exploration missions to Mars, as well as during the subsequent interpretation of data returned by those missions.
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Affiliation(s)
- Lucas Demaret
- Mass Spectrometry Laboratory, MolSys Research Unit, University of Liege, Liege, Belgium
- Early Life Traces & Evolution-Astrobiology, UR Astrobiology, University of Liege, Liege, Belgium
| | - Ian B Hutchinson
- Department of Physics and Astronomy, University of Leicester, Leicester, United Kingdom
| | - Richard Ingley
- Department of Physics and Astronomy, University of Leicester, Leicester, United Kingdom
| | - Howell G M Edwards
- Department of Physics and Astronomy, University of Leicester, Leicester, United Kingdom
| | - Nathalie Fagel
- Laboratory Argiles, Géochimie et Environnements Sédimentaires, University of Liege, Liege, Belgium
| | - Philippe Compere
- Laboratory of Functional and Evolutionary Morphology, UR FOCUS, and Centre for Applied Research and Education in Microscopy (CAREM), University of Liege, Liege, Belgium
| | - Emmanuelle J Javaux
- Early Life Traces & Evolution-Astrobiology, UR Astrobiology, University of Liege, Liege, Belgium
| | - Gauthier Eppe
- Mass Spectrometry Laboratory, MolSys Research Unit, University of Liege, Liege, Belgium
| | - Cédric Malherbe
- Mass Spectrometry Laboratory, MolSys Research Unit, University of Liege, Liege, Belgium
- Early Life Traces & Evolution-Astrobiology, UR Astrobiology, University of Liege, Liege, Belgium
- Department of Physics and Astronomy, University of Leicester, Leicester, United Kingdom
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6
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Gonzalez-Nayeck AC, Mohr W, Tang T, Sattin S, Parenteau MN, Jahnke LL, Pearson A. Absence of canonical trophic levels in a microbial mat. GEOBIOLOGY 2022; 20:726-740. [PMID: 35831948 DOI: 10.1111/gbi.12511] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2022] [Revised: 06/16/2022] [Accepted: 06/26/2022] [Indexed: 06/15/2023]
Abstract
In modern ecosystems, the carbon stable isotope (δ13 C) ratios of consumers generally conform to the principle "you are what you eat, +1‰." However, this metric may not apply to microbial mat systems where diverse communities, using a variety of carbon substrates via multiple assimilation pathways, live in close physical association and phagocytosis is minimal or absent. To interpret the δ13 C record of the Proterozoic and early Paleozoic, when mat-based productivity likely was widespread, it is necessary to understand how a microbially driven producer-consumer structure affects the δ13 C compositions of biomass and preservable lipids. Protein Stable Isotope Fingerprinting (P-SIF) is a recently developed method that allows measurement of the δ13 C values of whole proteins, separated from environmental samples and identified taxonomically via proteomics. Here, we use P-SIF to determine the trophic relationships in a microbial mat sample from Chocolate Pots Hot Springs, Yellowstone National Park (YNP), USA. In this mat, proteins from heterotrophic bacteria are indistinguishable from cyanobacterial proteins, indicating that "you are what you eat, +1‰" is not applicable. To explain this finding, we hypothesize that sugar production and consumption dominate the net ecosystem metabolism, yielding a community in which producers and consumers share primary photosynthate as a common resource. This idea was validated by confirming that glucose moieties in exopolysaccharide were equal in δ13 C composition to both cyanobacterial and heterotrophic proteins, and by confirming that highly 13 C-depleted fatty acids (FAs) of Cyanobacteria dominate the lipid pool, consistent with flux-balance expectations for systems that overproduce primary photosynthate. Overall, the results confirm that the δ13 C composition of microbial biomass and lipids is tied to specific metabolites, rather than to autotrophy versus heterotrophy or to individual trophic levels. Therefore, we suggest that aerobic microbial heterotrophy is simply a case of "you are what you eat."
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Affiliation(s)
- Ana C Gonzalez-Nayeck
- Department of Earth and Planetary Sciences, Harvard University, Cambridge, Massachusetts, USA
| | - Wiebke Mohr
- Department of Earth and Planetary Sciences, Harvard University, Cambridge, Massachusetts, USA
- Max-Planck-Institute for Marine Microbiology, Bremen, Germany
| | - Tiantian Tang
- Department of Earth and Planetary Sciences, Harvard University, Cambridge, Massachusetts, USA
- State Key Laboratory of Marine Environmental Science (Xiamen University), Xiamen, Fujian, China
- College of Ocean and Earth Sciences, Xiamen University, Xiamen, Fujian, China
| | - Sarah Sattin
- Department of Earth and Planetary Sciences, Harvard University, Cambridge, Massachusetts, USA
| | | | - Linda L Jahnke
- NASA Ames Research Center, Moffett Field, California, USA
| | - Ann Pearson
- Department of Earth and Planetary Sciences, Harvard University, Cambridge, Massachusetts, USA
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7
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Megevand V, Carrizo D, Lezcano MÁ, Moreno-Paz M, Cabrol NA, Parro V, Sánchez-García L. Lipid Profiles From Fresh Biofilms Along a Temperature Gradient on a Hydrothermal Stream at El Tatio (Chilean Andes), as a Proxy for the Interpretation of Past and Present Biomarkers Beyond Earth. Front Microbiol 2022; 13:811904. [PMID: 35832812 PMCID: PMC9271869 DOI: 10.3389/fmicb.2022.811904] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2021] [Accepted: 05/18/2022] [Indexed: 11/13/2022] Open
Abstract
Hydrothermal systems and their deposits are primary targets in the search for fossil evidence of life beyond Earth. However, to learn how to decode fossil biomarker records in ancient hydrothermal deposits, we must first be able to interpret unambiguously modern biosignatures, their distribution patterns, and their association with physicochemical factors. Here, we investigated the molecular and isotopic profile of microbial biomarkers along a thermal gradient (from 29 to 72°C) in a hot spring (labeled Cacao) from El Tatio, a geyser field in the Chilean Andes with abundant opaline silica deposits resembling the nodular and digitate structures discovered on Mars. As a molecular forensic approach, we focused on the analysis of lipid compounds bearing recognized resistance to degradation and the potential to reconstruct the paleobiology of an environment on a broader temporal scale than other, more labile, biomolecules. By exploiting the lipid biomarkers' potential to diagnose biological sources and carbon fixation pathways, we reconstructed the microbial community structure and its ecology along the Cacao hydrothermal transect. The taxonomic adscription of the lipid biomarkers was qualitatively corroborated with DNA sequencing analysis. The forensic capacity of the lipid biomarkers to identify biosources in fresh biofilms was validated down to the genus level for Roseiflexus, Chloroflexus, and Fischerella. We identified lipid biomarkers and DNA of several new cyanobacterial species in El Tatio and reported the first detection of Fischerella biomarkers at a temperature as high as 72°C. This, together with ecological peculiarities and the proportion of clades being characterized as unclassified, illustrates the ecological singularity of El Tatio and strengthens its astrobiological relevance. The Cacao hydrothermal ecosystem was defined by a succession of microbial communities and metabolic traits associated with a high- (72°C) to low-(29°C) temperature gradient that resembled the inferred metabolic sequence events from the 16S rRNA gene universal phylogenetic tree from thermophilic to anoxygenic photosynthetic species and oxygenic phototrophs. The locally calibrated DNA-validated lipidic profile in the Cacao biofilms provided a modern (molecular and isotopic) end member to facilitate the recognition of past biosources and metabolisms from altered biomarkers records in ancient silica deposits at El Tatio analogous to Martian opaline silica structures.
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Affiliation(s)
- Valentine Megevand
- Centro de Astrobiología (CAB), INTA-CSIC, Madrid, Spain
- Department of Earth Sciences, Ecole Normale Supérieure de Lyon, Université Claude Bernard Lyon, Lyon, France
| | | | | | | | - Nathalie A. Cabrol
- Carl Sagan Center for Research, The SETI Institute, Mountain View, CA, United States
| | - Víctor Parro
- Centro de Astrobiología (CAB), INTA-CSIC, Madrid, Spain
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Royle SH, Salter TL, Watson JS, Sephton MA. Mineral Matrix Effects on Pyrolysis Products of Kerogens Infer Difficulties in Determining Biological Provenance of Macromolecular Organic Matter at Mars. ASTROBIOLOGY 2022; 22:520-540. [PMID: 35171040 DOI: 10.1089/ast.2021.0074] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
Abstract
Ancient martian organic matter is likely to take the form of kerogen-like recalcitrant macromolecular organic matter (MOM), existing in close association with reactive mineral surfaces, especially iron oxides. Detecting and identifying a biological origin for martian MOM will therefore be of utmost importance for life-detection efforts at Mars. We show that Type I and Type IV kerogens provide effective analogues for putative martian MOM of biological and abiological (meteoric) provenances, respectively. We analyze the pyrolytic breakdown products when these kerogens are mixed with mineral matrices highly relevant for the search for life on Mars. We demonstrate that, using traditional thermal techniques as generally used by the Sample Analysis at Mars and Mars Organic Molecule Analyser instruments, even the breakdown products of highly recalcitrant MOM are transformed during analysis in the presence of reactive mineral surfaces, particularly iron. Analytical transformation reduces the diagnostic ability of this technique, as detected transformation products of both biological and abiological MOM may be identical (low molecular weight gas phases and benzene) and indistinguishable. The severity of transformational effects increased through calcite < kaolinite < hematite < nontronite < magnetite < goethite. Due to their representation of various habitable aqueous environments and the preservation potential of organic matter by iron, it is not advisable to completely avoid iron-rich strata. We conclude that hematite-rich localities, with evidence of extensive aqueous alteration of originally reducing phases, such as the Vera Rubin Ridge, may be relatively promising targets for identifying martian biologically sourced MOM.
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Affiliation(s)
- Samuel H Royle
- Department of Earth Science and Engineering, Imperial College London, London, UK
| | - Tara L Salter
- Department of Earth Science and Engineering, Imperial College London, London, UK
| | - Jonathan S Watson
- Department of Earth Science and Engineering, Imperial College London, London, UK
| | - Mark A Sephton
- Department of Earth Science and Engineering, Imperial College London, London, UK
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Royle SH, Watson JS, Sephton MA. Transformation of Cyanobacterial Biomolecules by Iron Oxides During Flash Pyrolysis: Implications for Mars Life-Detection Missions. ASTROBIOLOGY 2021; 21:1363-1386. [PMID: 34402652 DOI: 10.1089/ast.2020.2428] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/13/2023]
Abstract
Answering the question of whether life ever existed on Mars is a key goal of both NASA's and ESA's imminent Mars rover missions. The obfuscatory effects of oxidizing salts, such as perchlorates and sulfates, on organic matter during thermal decomposition analysis techniques are well established. Less well studied are the transformative effects of iron oxides and (oxy)hydroxides, which are present in great abundances in the martian regolith. We examined the products of flash pyrolysis-gas chromatography-mass spectrometry (a technique analogous to the thermal techniques employed by past, current, and future landed Mars missions) which form when the cyanobacteria Arthrospira platensis are heated in the presence of a variety of Mars-relevant iron-bearing minerals. We found that iron oxides/(oxy)hydroxides have transformative effects on the pyrolytic products of cyanobacterial biomolecules. Both the abundance and variety of molecular species detected were decreased as iron substrates transformed biomolecules, by both oxidative and reductive processes, into lower fidelity alkanes, aromatic and aryl-bonded hydrocarbons. Despite the loss of fidelity, a suite that contains mid-length alkanes and polyaromatic hydrocarbons and/or aryl-bonded molecules in iron-rich samples subjected to pyrolysis may allude to the transformation of cyanobacterially derived mid-long chain length fatty acids (particularly unsaturated fatty acids) originally present in the sample. Hematite was found to be the iron oxide with the lowest transformation potential, and because this iron oxide has a high affinity for codeposition of organic matter and preservation over geological timescales, sampling at Mars should target sediments/strata that have undergone a diagenetic history encouraging the dehydration, dihydroxylation, and oxidation of more reactive iron-bearing phases to hematite by looking for (mineralogical) evidence of the activity of oxidizing, acidic/neutral, and either hot or long-lived fluids.
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Affiliation(s)
- Samuel H Royle
- Impacts and Astromaterials Research Centre, Department of Earth Science and Engineering, Imperial College London, London, United Kingdom
| | - Jonathan S Watson
- Impacts and Astromaterials Research Centre, Department of Earth Science and Engineering, Imperial College London, London, United Kingdom
| | - Mark A Sephton
- Impacts and Astromaterials Research Centre, Department of Earth Science and Engineering, Imperial College London, London, United Kingdom
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10
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Royle SH, Tan JSW, Watson JS, Sephton MA. Pyrolysis of Carboxylic Acids in the Presence of Iron Oxides: Implications for Life Detection on Missions to Mars. ASTROBIOLOGY 2021; 21:673-691. [PMID: 33635150 DOI: 10.1089/ast.2020.2226] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
The search for, and characterization of, organic matter on Mars is central to efforts in identifying habitable environments and detecting evidence of life in the martian surface and near surface. Iron oxides are ubiquitous in the martian regolith and are known to be associated with the deposition and preservation of organic matter in certain terrestrial environments, thus iron oxide-rich sediments are potential targets for life-detection missions. The most frequently used protocol for martian organic matter characterization (also planned for use on ExoMars) has been thermal extraction for the transfer of organic matter to gas chromatography-mass spectrometry (GC-MS) detectors. For the effective use of thermal extraction for martian samples, it is necessary to explore how potential biomarker organic molecules evolve during this process in the presence of iron oxides. We have thermally decomposed iron oxides simultaneously with (z)-octadec-9-enoic and n-octadecanoic acids and analyzed the products through pyrolysis-GC-MS. We found that the thermally driven dehydration, reduction, and recrystallization of iron oxides transformed fatty acids. Overall detectability of products greatly reduced, molecular diversity decreased, unsaturated products decreased, and aromatization increased. The severity of this effect increased as reduction potential of the iron oxide and inferred free radical formation increased. Of the iron oxides tested hematite showed the least transformative effects, followed by magnetite, goethite, then ferrihydrite. It was possible to identify the saturation state of the parent carboxylic acid at high (0.5 wt %) concentrations by the distribution of n-alkylbenzenes in the pyrolysis products. When selecting life-detection targets on Mars, localities where hematite is the dominant iron oxide could be targeted preferentially, otherwise thermal analysis of carboxylic acids, or similar biomarker molecules, will lead to enhanced polymerization, aromatization, and breakdown, which will in turn reduce the fidelity of the original biomarker, similar to changes normally observed during thermal maturation.
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Affiliation(s)
- Samuel H Royle
- Department of Earth Science and Engineering, Impacts and Astromaterials Research Centre, Imperial College London, London, United Kingdom
| | - Jonathan S W Tan
- Department of Earth Science and Engineering, Impacts and Astromaterials Research Centre, Imperial College London, London, United Kingdom
| | - Jonathan S Watson
- Department of Earth Science and Engineering, Impacts and Astromaterials Research Centre, Imperial College London, London, United Kingdom
| | - Mark A Sephton
- Department of Earth Science and Engineering, Impacts and Astromaterials Research Centre, Imperial College London, London, United Kingdom
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Tan JSW, Sephton MA. Quantifying Preservation Potential: Lipid Degradation in a Mars-Analog Circumneutral Iron Deposit. ASTROBIOLOGY 2021; 21:638-654. [PMID: 33835833 DOI: 10.1089/ast.2020.2344] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
Comparisons between the preservation potential of Mars-analog environments have historically been qualitative rather than quantitative. Recently, however, laboratory-based artificial maturation combined with kinetic modeling techniques have emerged as a potential means by which the preservation potential of solvent-soluble organic matter can be quantified in various Mars-analog environments. These methods consider how elevated temperatures, pressures, and organic-inorganic interactions influence the degradation of organic biomarkers post-burial. We used these techniques to investigate the preservation potential of deposits from a circumneutral iron-rich groundwater system. These deposits are composed of ferrihydrite (Fe5HO8 · 4H2O), an amorphous iron hydroxide mineral that is a common constituent of rocks found in ancient lacustrine environments on Mars, such as those observed in Gale Crater. Both natural and synthetic ferrihydrite samples were subjected to hydrous pyrolysis to observe the effects of long-term burial on the mineralogy and organic content of the samples. Our experiments revealed that organic-inorganic interactions in the samples are dominated by the transformation of iron minerals. As amorphous ferrihydrite transforms into more crystalline species, the decrease in surface area results in the desorption of organic matter, potentially rendering them more susceptible to degradation. We also find that circumneutral iron-rich deposits provide unfavorable conditions for the preservation of solvent-soluble organic matter. Quantitative comparisons between preservation potentials as calculated when using kinetic parameters show that circumneutral iron-rich deposits are ∼25 times less likely to preserve solvent-soluble organic matter compared with acidic, iron-rich environments. Our results suggest that circumneutral iron-rich deposits should be deprioritized in favor of acidic iron- and sulfur-rich deposits when searching for evidence of life with solvent extraction techniques.
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Affiliation(s)
- Jonathan S W Tan
- Department of Earth Science and Engineering, Impacts and Astromaterials Research Centre, Imperial College London, London, United Kingdom
| | - Mark A Sephton
- Department of Earth Science and Engineering, Impacts and Astromaterials Research Centre, Imperial College London, London, United Kingdom
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Williams AJ, Craft KL, Millan M, Johnson SS, Knudson CA, Juarez Rivera M, McAdam AC, Tobler D, Skok JR. Fatty Acid Preservation in Modern and Relict Hot-Spring Deposits in Iceland, with Implications for Organics Detection on Mars. ASTROBIOLOGY 2021; 21:60-82. [PMID: 33121252 DOI: 10.1089/ast.2019.2115] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Hydrothermal spring deposits host unique microbial ecosystems and have the capacity to preserve microbial communities as biosignatures within siliceous sinter layers. This quality makes terrestrial hot springs appealing natural laboratories to study the preservation of both organic and morphologic biosignatures. The discovery of hydrothermal deposits on Mars has called attention to these hot springs as Mars-analog environments, driving forward the study of biosignature preservation in these settings to help prepare future missions targeting the recovery of biosignatures from martian hot-spring deposits. This study quantifies the fatty acid load in three Icelandic hot-spring deposits ranging from modern and inactive to relict. Samples were collected from both the surface and 2-18 cm in depth to approximate the drilling capabilities of current and upcoming Mars rovers. To determine the preservation potential of organics in siliceous sinter deposits, fatty acid analyses were performed with pyrolysis-gas chromatography-mass spectrometry (GC-MS) utilizing thermochemolysis with tetramethylammonium hydroxide (TMAH). This technique is available on both current and upcoming Mars rovers. Results reveal that fatty acids are often degraded in the subsurface relative to surface samples but are preserved and detectable with the TMAH pyrolysis-GC-MS method. Hot-spring mid-to-distal aprons are often the best texturally and geomorphically definable feature in older, degraded terrestrial sinter systems and are therefore most readily detectable on Mars from orbital images. These findings have implications for the detection of organics in martian hydrothermal systems as they suggest that organics might be detectable on Mars in relatively recent hot-spring deposits, but preservation likely deteriorates over geological timescales. Rovers with thermochemolysis pyrolysis-GC-MS instrumentation may be able to detect fatty acids in hot-spring deposits if the organics are relatively young; therefore, martian landing site and sample selection are of paramount importance in the search for organics on Mars.
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Affiliation(s)
- Amy J Williams
- Department of Geological Sciences, University of Florida, Gainesville, Florida, USA
- Planetary Environments Laboratory (Code 699), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
| | - Kathleen L Craft
- Johns Hopkins University Applied Physics Laboratory, Laurel, Maryland, USA
| | - Maëva Millan
- Planetary Environments Laboratory (Code 699), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
- Department of Biology, Georgetown University, Washington, District of Columbia, USA
| | - Sarah Stewart Johnson
- Department of Biology, Georgetown University, Washington, District of Columbia, USA
- Science, Technology, and International Affairs Program, Georgetown University, Washington, District of Columbia, USA
| | - Christine A Knudson
- Planetary Environments Laboratory (Code 699), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
- CRESST Center for Research Exploration in Space Science and Technology at the University of Maryland, College Park, Maryland, USA
| | - Marisol Juarez Rivera
- School of Earth and Space Exploration, Arizona State University, Tempe, Arizona, USA
| | - Amy C McAdam
- Planetary Environments Laboratory (Code 699), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
| | - Dominique Tobler
- Department of Chemistry, Nano-Science Center, University of Copenhagen, Copenhagen, Denmark
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Fortney NW, Beard BL, Hutchings JA, Shields MR, Bianchi TS, Boyd ES, Johnson CM, Roden EE. Geochemical and Stable Fe Isotopic Analysis of Dissimilatory Microbial Iron Reduction in Chocolate Pots Hot Spring, Yellowstone National Park. ASTROBIOLOGY 2021; 21:83-102. [PMID: 32580560 DOI: 10.1089/ast.2019.2058] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Chocolate Pots hot spring (CP) is an Fe-rich, circumneutral-pH geothermal spring in Yellowstone National Park. Relic hydrothermal systems have been identified on Mars, and modern hydrothermal environments such as CP are useful for gaining insight into potential pathways for generation of biosignatures of ancient microbial life on Earth and Mars. Fe isotope fractionation is recognized as a signature of dissimilatory microbial iron oxide reduction (DIR) in both the rock record and modern sedimentary environments. Previous studies in CP have demonstrated the presence of DIR in vent pool deposits and show aqueous-/solid-phase Fe isotope variations along the hot spring flow path that may be linked to this process. In this study, we examined the geochemistry and stable Fe isotopic composition of spring water and sediment core samples collected from the vent pool and along the flow path, with the goal of evaluating whether Fe isotopes can serve as a signature of past or present DIR activity. Bulk sediment Fe redox speciation confirmed that DIR is active within the hot spring vent pool sediments (but not in more distal deposits), and the observed Fe isotope fractionation between Fe(II) and Fe(III) is consistent with previous studies of DIR-driven Fe isotope fractionation. However, modeling of sediment Fe isotope distributions indicates that DIR does not produce a unique Fe isotopic signature of DIR in the vent pool environment. Because of rapid chemical and isotopic communication between the vent pool fluid and sediment, sorption of Fe(II) to Fe(III) oxides would produce an isotopic signature similar to DIR despite DIR-driven generation of large quantities of isotopically light solid-associated Fe(II). The possibility exists, however, for preservation of specific DIR-derived Fe(II) minerals such as siderite (which is present in the vent pool deposits), whose isotopic composition could serve as a long-term signature of DIR in relic hot spring environments.
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Affiliation(s)
- Nathaniel W Fortney
- Department of Geoscience, NASA Astrobiology Institute, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - Brian L Beard
- Department of Geoscience, NASA Astrobiology Institute, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - Jack A Hutchings
- Department of Geological Sciences, University of Florida, Gainesville, Florida, USA
| | - Michael R Shields
- Department of Geological Sciences, University of Florida, Gainesville, Florida, USA
| | - Thomas S Bianchi
- Department of Geological Sciences, University of Florida, Gainesville, Florida, USA
| | - Eric S Boyd
- Department of Microbiology and Immunology, NASA Astrobiology Institute, Montana State University, Bozeman, Montana, USA
| | - Clark M Johnson
- Department of Geoscience, NASA Astrobiology Institute, University of Wisconsin-Madison, Madison, Wisconsin, USA
| | - Eric E Roden
- Department of Geoscience, NASA Astrobiology Institute, University of Wisconsin-Madison, Madison, Wisconsin, USA
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Tan J, Sephton MA. Organic Records of Early Life on Mars: The Role of Iron, Burial, and Kinetics on Preservation. ASTROBIOLOGY 2020; 20:53-72. [PMID: 31755737 PMCID: PMC6987739 DOI: 10.1089/ast.2019.2046] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/04/2019] [Accepted: 09/11/2019] [Indexed: 05/19/2023]
Abstract
Samples that are likely to contain evidence of past life on Mars must have been deposited when and where environments exhibited habitable conditions. Mars analog sites provide the opportunity to study how life could have exploited such habitable conditions. Acidic iron- and sulfur-rich streams are good geochemical analogues for the late Noachian and early Hesperian, periods of martian history where habitable conditions were widespread. Past life on Mars would have left behind fossilized microbial organic remains. These are often-sought diagnostic evidence, but they must be shielded from the harsh radiation flux at the martian surface and its deleterious effect on organic matter. One mechanism that promotes such preservation is burial, which raises questions about how organic biomarkers are influenced by the postburial effects of diagenesis. We investigated the kinetics of organic degradation in the subsurface of Mars. Natural mixtures of acidic iron- and sulfur-rich stream sediments and their associated microbial populations and remains were subjected to hydrous pyrolysis, which simulated the increased temperatures and pressures of burial alongside any promoted organic/mineral interactions. Calculations were made to extrapolate the observed changes over martian history. Our experiments indicate that low carbon contents, high water-to-rock ratios, and the presence of iron-rich minerals combine to provide unfavorable conditions for the preservation of soluble organic matter over the billions of years necessary to produce present-day organic records of late Noachian and early Hesperian life on Mars. Successful sample selection strategies must therefore consider the pre-, syn-, and postburial histories of sedimentary records on Mars and the balance between the production of biomass and the long-term preservation of organic biomarkers over geological time.
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Affiliation(s)
- Jonathan Tan
- Department of Earth Science and Engineering, Impacts and Astromaterials Research Centre, Imperial College London, London, United Kingdom
- Address correspondence to: Jonathan Tan, Department of Earth Science and Engineering, Impacts and Astromaterials Research Centre, Imperial College London, London SW7 2AZ, United Kingdom
| | - Mark A. Sephton
- Department of Earth Science and Engineering, Impacts and Astromaterials Research Centre, Imperial College London, London, United Kingdom
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Abstract
Clay authigenesis associated with the activity of microorganisms is an important process for biofilm preservation and may provide clues to the formation of biominerals on the ancient Earth. Fossilization of fungal biofilms attached to vesicles or cracks in igneous rock, is characterized by fungal-induced clay mineralization and can be tracked in deep rock and deep time, from late Paleoproterozoic (2.4 Ga), to the present. Here we briefly review the current data on clay mineralization by fossil fungal biofilms from oceanic and continental subsurface igneous rock. The aim of this study was to compare the nature of subsurface fungal clays from different igneous settings to evaluate the importance of host rock and ambient redox conditions for clay speciation related to fossil microorganisms. Our study suggests that the most common type of authigenic clay associated with pristine fossil fungal biofilms in both oxic (basaltic) and anoxic (granitic) settings are montmorillonite-like smectites and confirms a significant role of fungal biofilms in the cycling of elements between host rock, ocean and secondary precipitates. The presence of life in the deep subsurface may thus prove more significant than host rock geochemistry in directing the precipitation of authigenic clays in the igneous crust, the extent of which remains to be fully understood.
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Williams AJ, Eigenbrode J, Floyd M, Wilhelm MB, O'Reilly S, Johnson SS, Craft KL, Knudson CA, Andrejkovičová S, Lewis JM, Buch A, Glavin DP, Freissinet C, Williams RH, Szopa C, Millan M, Summons RE, McAdam A, Benison K, Navarro-González R, Malespin C, Mahaffy PR. Recovery of Fatty Acids from Mineralogic Mars Analogs by TMAH Thermochemolysis for the Sample Analysis at Mars Wet Chemistry Experiment on the Curiosity Rover. ASTROBIOLOGY 2019; 19:522-546. [PMID: 30869535 PMCID: PMC6459279 DOI: 10.1089/ast.2018.1819] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/08/2018] [Accepted: 01/14/2019] [Indexed: 05/21/2023]
Abstract
The Mars Curiosity rover carries a diverse instrument payload to characterize habitable environments in the sedimentary layers of Aeolis Mons. One of these instruments is Sample Analysis at Mars (SAM), which contains a mass spectrometer that is capable of detecting organic compounds via pyrolysis gas chromatography mass spectrometry (py-GC-MS). To identify polar organic molecules, the SAM instrument carries the thermochemolysis reagent tetramethylammonium hydroxide (TMAH) in methanol (hereafter referred to as TMAH). TMAH can liberate fatty acids bound in macromolecules or chemically bound monomers associated with mineral phases and make these organics detectable via gas chromatography mass spectrometry (GC-MS) by methylation. Fatty acids, a type of carboxylic acid that contains a carboxyl functional group, are of particular interest given their presence in both biotic and abiotic materials. This work represents the first analyses of a suite of Mars-analog samples using the TMAH experiment under select SAM-like conditions. Samples analyzed include iron oxyhydroxides and iron oxyhydroxysulfates, a mixture of iron oxides/oxyhydroxides and clays, iron sulfide, siliceous sinter, carbonates, and shale. The TMAH experiments produced detectable signals under SAM-like pyrolysis conditions when organics were present either at high concentrations or in geologically modern systems. Although only a few analog samples exhibited a high abundance and variety of fatty acid methyl esters (FAMEs), FAMEs were detected in the majority of analog samples tested. When utilized, the TMAH thermochemolysis experiment on SAM could be an opportunity to detect organic molecules bound in macromolecules on Mars. The detection of a FAME profile is of great astrobiological interest, as it could provide information regarding the source of martian organic material detected by SAM.
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Affiliation(s)
- Amy J. Williams
- Department of Physics, Astronomy, and Geosciences, Towson University, Towson, Maryland, USA
- Center for Research and Exploration in Space Sciences and Technology/University of Maryland Baltimore County, Baltimore, Maryland, USA
- Space Science Exploration Division (Code 690), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
| | - Jennifer Eigenbrode
- Space Science Exploration Division (Code 690), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
| | - Melissa Floyd
- Space Science Exploration Division (Code 690), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
| | | | - Shane O'Reilly
- Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
- School of Earth Sciences, University College Dublin, Dublin, Ireland
| | | | - Kathleen L. Craft
- Johns Hopkins University Applied Physics Laboratory, Laurel, Maryland, USA
| | - Christine A. Knudson
- Space Science Exploration Division (Code 690), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
- Center for Research and Exploration in Space Sciences and Technology/University of Maryland College Park, College Park, Maryland, USA
| | - Slavka Andrejkovičová
- Space Science Exploration Division (Code 690), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
- Center for Research and Exploration in Space Sciences and Technology/University of Maryland College Park, College Park, Maryland, USA
| | - James M.T. Lewis
- Space Science Exploration Division (Code 690), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
- Universities Space Research Association, Columbia, Maryland, USA
| | - Arnaud Buch
- Laboratoire de Génie des Procédés et Matériaux, CentraleSupelec, Gif sur Yvette, France
| | - Daniel P. Glavin
- Space Science Exploration Division (Code 690), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
| | - Caroline Freissinet
- CNRS–UVSQ Laboratoire Atmosphères Milieux Observations Spatiales LATMOS, Guyancourt, France
| | - Ross H. Williams
- Space Science Exploration Division (Code 690), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
- Center for Research and Exploration in Space Sciences and Technology/University of Maryland College Park, College Park, Maryland, USA
| | - Cyril Szopa
- CNRS–UVSQ Laboratoire Atmosphères Milieux Observations Spatiales LATMOS, Guyancourt, France
| | - Maëva Millan
- Space Science Exploration Division (Code 690), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
- Department of Biology, Georgetown University, Washington, DC, USA
| | - Roger E. Summons
- Department of Earth, Atmospheric and Planetary Sciences, Massachusetts Institute of Technology, Cambridge, Massachusetts, USA
| | - Amy McAdam
- Space Science Exploration Division (Code 690), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
| | - Kathleen Benison
- Department of Geology and Geography, West Virginia University, Morgantown, West Virginia, USA
| | - Rafael Navarro-González
- Instituto de Ciencias Nucleares, Universidad Nacional Autonoma de Mexico, Circuito Exterior, Ciudad Universitaria, Ciudad de Mexico, Mexico
| | - Charles Malespin
- Space Science Exploration Division (Code 690), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
| | - Paul R. Mahaffy
- Space Science Exploration Division (Code 690), NASA Goddard Space Flight Center, Greenbelt, Maryland, USA
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Chan MA, Bowen BB, Corsetti FA, Farrand WH, Law ES, Newsom HE, Perl SM, Spear JR, Thompson DR. Exploring, Mapping, and Data Management Integration of Habitable Environments in Astrobiology. Front Microbiol 2019; 10:147. [PMID: 30891006 PMCID: PMC6412026 DOI: 10.3389/fmicb.2019.00147] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/24/2018] [Accepted: 01/21/2019] [Indexed: 11/17/2022] Open
Abstract
New approaches to blending geoscience, planetary science, microbiology-geobiology/ecology, geoinformatics and cyberinfrastructure technology disciplines in a holistic effort can be transformative to astrobiology explorations. Over the last two decades, overwhelming orbital evidence has confirmed the abundance of authigenic (in situ, formed in place) minerals on Mars. On Earth, environments where authigenic minerals form provide a substrate for the preservation of microbial life. Similarly, extraterrestrial life is likely to be preserved where crustal minerals can record and preserve the biochemical mechanisms (i.e., biosignatures). The search for astrobiological evidence on Mars has focused on identifying past or present habitable environments - places that could support some semblance of life. Thus, authigenic minerals represent a promising habitable environment where extraterrestrial life could be recorded and potentially preserved over geologic time scales. Astrobiology research necessarily takes place over vastly different scales; from molecules to viruses and microbes to those of satellites and solar system exploration, but the differing scales of analyses are rarely connected quantitatively. The mismatch between the scales of these observations- from the macro- satellite mineralogical observations to the micro- microbial observations- limits the applicability of our astrobiological understanding as we search for records of life beyond Earth. Each-scale observation requires knowledge of the geologic context and the environmental parameters important for assessing habitability. Exploration efforts to search for extraterrestrial life should attempt to quantify both the geospatial context and the temporal/spatial relationships between microbial abundance and diversity within authigenic minerals at multiple scales, while assimilating resolutions from satellite observations to field measurements to microscopic analyses. Statistical measures, computer vision, and the geospatial synergy of Geographic Information Systems (GIS), can allow analyses of objective data-driven methods to locate, map, and predict where the "sweet spots" of habitable environments occur at multiple scales. This approach of science information architecture or an "Astrobiology Information System" can provide the necessary maps to guide researchers to discoveries via testing, visualizing, documenting, and collaborating on significant data relationships that will advance explorations for evidence of life in our solar system and beyond.
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Affiliation(s)
- Marjorie A. Chan
- Department of Geology and Geophysics, The University of Utah, Salt Lake City, UT, United States
| | - Brenda B. Bowen
- Department of Geology and Geophysics, The University of Utah, Salt Lake City, UT, United States
| | - Frank A. Corsetti
- Department of Earth Sciences, University of Southern California, Los Angeles, CA, United States
| | | | - Emily S. Law
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, United States
| | - Horton E. Newsom
- Department Earth and Planetary Sciences, University of New Mexico, Albuquerque, NM, United States
| | - Scott M. Perl
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, United States
| | - John R. Spear
- Department of Civil and Environmental Engineering, Colorado School of Mines, Golden, CO, United States
| | - David R. Thompson
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, United States
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Floyd MAM, Williams AJ, Grubisic A, Emerson D. Metabolic Processes Preserved as Biosignatures in Iron-Oxidizing Microorganisms: Implications for Biosignature Detection on Mars. ASTROBIOLOGY 2019; 19:40-52. [PMID: 30044121 PMCID: PMC6338579 DOI: 10.1089/ast.2017.1745] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Iron-oxidizing bacteria occupy a distinct environmental niche. These chemolithoautotrophic organisms require very little oxygen (when neutrophilic) or outcompete oxygen for access to Fe(II) (when acidophilic). The utilization of Fe(II) as an electron donor makes them strong analog organisms for any potential life that could be found on Mars. Despite their importance to the elucidation of early life on, and potentially beyond, Earth, many details of their metabolism remain unknown. By using on-line thermochemolysis and gas chromatography-mass spectrometry (GC-MS), a distinct signal for a low-molecular-weight molecule was discovered in multiple iron-oxidizing isolates as well as several iron-dominated environmental samples, from freshwater and marine environments and in both modern and older iron rock samples. This GC-MS signal was neither detected in organisms that did not use Fe(II) as an electron donor nor present in iron mats in which organic carbon was destroyed by heating. Mass spectral analysis indicates that the molecule bears the hallmarks of a pterin-bearing molecule. Genomic analysis has previously identified a molybdopterin that could be part of the electron transport chain in a number of lithotrophic iron-oxidizing bacteria, suggesting one possible source for this signal is the pterin component of this protein. The rock samples indicate the possibility that the molecule can be preserved within lithified sedimentary rocks. The specificity of the signal to organisms requiring iron in their metabolism makes this a novel biosignature with which to investigate both the evolution of life on ancient Earth and potential life on Mars.
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Affiliation(s)
| | - Amy J Williams
- 1 NASA Goddard Space Flight Center , Greenbelt, Maryland
- 2 Department of Physics, Astronomy, and Geosciences, Towson University , Towson, Maryland
| | | | - David Emerson
- 3 Bigelow Laboratory for Ocean Sciences , East Boothbay, Maine
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Fortney NW, He S, Converse BJ, Boyd ES, Roden EE. Investigating the Composition and Metabolic Potential of Microbial Communities in Chocolate Pots Hot Springs. Front Microbiol 2018; 9:2075. [PMID: 30245673 PMCID: PMC6137239 DOI: 10.3389/fmicb.2018.02075] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2018] [Accepted: 08/14/2018] [Indexed: 01/14/2023] Open
Abstract
Iron (Fe) redox-based metabolisms likely supported life on early Earth and may support life on other Fe-rich rocky planets such as Mars. Modern systems that support active Fe redox cycling such as Chocolate Pots (CP) hot springs provide insight into how life could have functioned in such environments. Previous research demonstrated that Fe- and Si-rich and slightly acidic to circumneutral-pH springs at CP host active dissimilatory Fe(III) reducing microorganisms. However, the abundance and distribution of Fe(III)-reducing communities at CP is not well-understood, especially as they exist in situ. In addition, the potential for direct Fe(II) oxidation by lithotrophs in CP springs is understudied, in particular when compared to indirect oxidation promoted by oxygen producing Cyanobacteria. Here, a culture-independent approach, including 16S rRNA gene amplicon and shotgun metagenomic sequencing, was used to determine the distribution of putative Fe cycling microorganisms in vent fluids and sediment cores collected along the outflow channel of CP. Metagenome-assembled genomes (MAGs) of organisms native to sediment and planktonic microbial communities were screened for extracellular electron transfer (EET) systems putatively involved in Fe redox cycling and for CO2 fixation pathways. Abundant MAGs containing putative EET systems were identified as part of the sediment community at locations where Fe(III) reduction activity has previously been documented. MAGs encoding both putative EET systems and CO2 fixation pathways, inferred to be FeOB, were also present, but were less abundant components of the communities. These results suggest that the majority of the Fe(III) oxides that support in situ Fe(III) reduction are derived from abiotic oxidation. This study provides new insights into the interplay between Fe redox cycling and CO2 fixation in sustaining chemotrophic communities in CP with attendant implications for other neutral-pH hot springs.
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Affiliation(s)
- Nathaniel W. Fortney
- Department of Geoscience, NASA Astrobiology Institute, University of Wisconsin-Madison, Madison, WI, United States
| | - Shaomei He
- Department of Geoscience, NASA Astrobiology Institute, University of Wisconsin-Madison, Madison, WI, United States
- Department of Bacteriology, University of Wisconsin-Madison, Madison, WI, United States
| | - Brandon J. Converse
- Department of Geoscience, NASA Astrobiology Institute, University of Wisconsin-Madison, Madison, WI, United States
| | - Eric S. Boyd
- Department of Microbiology and Immunology, NASA Astrobiology Institute, Montana State University, Bozeman, MT, United States
| | - Eric E. Roden
- Department of Geoscience, NASA Astrobiology Institute, University of Wisconsin-Madison, Madison, WI, United States
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The Fate of Lipid Biosignatures in a Mars-Analogue Sulfur Stream. Sci Rep 2018; 8:7586. [PMID: 29765065 PMCID: PMC5954147 DOI: 10.1038/s41598-018-25752-7] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2017] [Accepted: 04/18/2018] [Indexed: 11/22/2022] Open
Abstract
Past life on Mars will have generated organic remains that may be preserved in present day Mars rocks. The most recent period in the history of Mars that retained widespread surface waters was the late Noachian and early Hesperian and thus possessed the potential to sustain the most evolved and widely distributed martian life. Guidance for investigating late Noachian and early Hesperian rocks is provided by studies of analogous acidic and sulfur-rich environments on Earth. Here we report organic responses for an acid stream containing acidophilic organisms whose post-mortem remains are entombed in iron sulphates and iron oxides. We find that, if life was present in the Hesperian, martian organic records will comprise microbial lipids. Lipids are a potential sizeable reservoir of fossil carbon on Mars, and can be used to distinguish between different domains of life. Concentrations of lipids, and particularly alkanoic or “fatty” acids, are highest in goethite layers that reflect high water-to-rock ratios and thus a greater potential for habitability. Goethite can dehydrate to hematite, which is widespread on Mars. Mars missions should seek to detect fatty acids or their diagenetic products in the oxides and hydroxides of iron associated with sulphur-rich environments.
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McMahon S, Bosak T, Grotzinger JP, Milliken RE, Summons RE, Daye M, Newman SA, Fraeman A, Williford KH, Briggs DEG. A Field Guide to Finding Fossils on Mars. JOURNAL OF GEOPHYSICAL RESEARCH. PLANETS 2018; 123:1012-1040. [PMID: 30034979 PMCID: PMC6049883 DOI: 10.1029/2017je005478] [Citation(s) in RCA: 42] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/07/2017] [Revised: 03/28/2018] [Accepted: 04/23/2018] [Indexed: 05/05/2023]
Abstract
The Martian surface is cold, dry, exposed to biologically harmful radiation and apparently barren today. Nevertheless, there is clear geological evidence for warmer, wetter intervals in the past that could have supported life at or near the surface. This evidence has motivated National Aeronautics and Space Administration and European Space Agency to prioritize the search for any remains or traces of organisms from early Mars in forthcoming missions. Informed by (1) stratigraphic, mineralogical and geochemical data collected by previous and current missions, (2) Earth's fossil record, and (3) experimental studies of organic decay and preservation, we here consider whether, how, and where fossils and isotopic biosignatures could have been preserved in the depositional environments and mineralizing media thought to have been present in habitable settings on early Mars. We conclude that Noachian-Hesperian Fe-bearing clay-rich fluvio-lacustrine siliciclastic deposits, especially where enriched in silica, currently represent the most promising and best understood astropaleontological targets. Siliceous sinters would also be an excellent target, but their presence on Mars awaits confirmation. More work is needed to improve our understanding of fossil preservation in the context of other environments specific to Mars, particularly within evaporative salts and pore/fracture-filling subsurface minerals.
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Affiliation(s)
- S. McMahon
- Department of Geology and GeophysicsYale UniversityNew HavenCTUSA
- UK Centre for Astrobiology, School of Physics and AstronomyUniversity of EdinburghEdinburghUK
| | - T. Bosak
- Department of Earth, Atmospheric and Planetary SciencesMassachusetts Institute of TechnologyCambridgeMAUSA
| | - J. P. Grotzinger
- Division of Geological and Planetary SciencesCalifornia Institute of TechnologyPasadenaCAUSA
| | - R. E. Milliken
- Department of Earth, Environmental and Planetary SciencesBrown UniversityProvidenceRIUSA
| | - R. E. Summons
- Department of Earth, Atmospheric and Planetary SciencesMassachusetts Institute of TechnologyCambridgeMAUSA
| | - M. Daye
- Department of Earth, Atmospheric and Planetary SciencesMassachusetts Institute of TechnologyCambridgeMAUSA
| | - S. A. Newman
- Department of Earth, Atmospheric and Planetary SciencesMassachusetts Institute of TechnologyCambridgeMAUSA
| | - A. Fraeman
- Jet Propulsion LaboratoryCalifornia Institute of TechnologyPasadenaCAUSA
| | - K. H. Williford
- Jet Propulsion LaboratoryCalifornia Institute of TechnologyPasadenaCAUSA
| | - D. E. G. Briggs
- Department of Geology and GeophysicsYale UniversityNew HavenCTUSA
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22
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Lewis JM, Najorka J, Watson JS, Sephton MA. The Search for Hesperian Organic Matter on Mars: Pyrolysis Studies of Sediments Rich in Sulfur and Iron. ASTROBIOLOGY 2018; 18:454-464. [PMID: 29298093 PMCID: PMC5910044 DOI: 10.1089/ast.2017.1717] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2017] [Accepted: 11/06/2017] [Indexed: 05/21/2023]
Abstract
Jarosite on Mars is of significant geological and astrobiological interest, as it forms in acidic aqueous conditions that are potentially habitable for acidophilic organisms. Jarosite can provide environmental context and may host organic matter. The most common extraction technique used to search for organic compounds on the surface of Mars is pyrolysis. However, thermal decomposition of jarosite releases oxygen into pyrolysis ovens, which degrades organic signals. Jarosite has a close association with the iron oxyhydroxide goethite in many depositional/diagenetic environments. Hematite can form by dehydration of goethite or directly from jarosite under certain aqueous conditions. Goethite and hematite are significantly more amenable than jarosite for pyrolysis experiments employed to search for organic matter. Analysis of the mineralogy and organic chemistry of samples from a natural acidic stream revealed a diverse response for organic compounds during pyrolysis of goethite-rich layers but a poor response for jarosite-rich or mixed jarosite-goethite samples. Goethite units that are associated with jarosite, but do not contain jarosite themselves, should be targeted for organic detection pyrolysis experiments on Mars. These findings are extremely timely, as exploration targets for Mars Science Laboratory include Vera Rubin Ridge (formerly known as "Hematite Ridge"), which may have formed from goethite precursors. Key Words: Mars-Pyrolysis-Jarosite-Goethite-Hematite-Biosignatures. Astrobiology 18, 454-464.
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Affiliation(s)
- James M.T. Lewis
- Impacts and Astromaterials Research Centre, Department of Earth Science and Engineering, Imperial College London, London, UK
| | - Jens Najorka
- Impacts and Astromaterials Research Centre, Department of Mineralogy, Natural History Museum, London, UK
| | - Jonathan S. Watson
- Impacts and Astromaterials Research Centre, Department of Earth Science and Engineering, Imperial College London, London, UK
| | - Mark A. Sephton
- Impacts and Astromaterials Research Centre, Department of Earth Science and Engineering, Imperial College London, London, UK
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23
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Hays LE, Graham HV, Des Marais DJ, Hausrath EM, Horgan B, McCollom TM, Parenteau MN, Potter-McIntyre SL, Williams AJ, Lynch KL. Biosignature Preservation and Detection in Mars Analog Environments. ASTROBIOLOGY 2017; 17:363-400. [PMID: 28177270 PMCID: PMC5478115 DOI: 10.1089/ast.2016.1627] [Citation(s) in RCA: 73] [Impact Index Per Article: 10.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/05/2023]
Abstract
This review of material relevant to the Conference on Biosignature Preservation and Detection in Mars Analog Environments summarizes the meeting materials and discussions and is further expanded upon by detailed references to the published literature. From this diverse source material, there is a detailed discussion on the habitability and biosignature preservation potential of five primary analog environments: hydrothermal spring systems, subaqueous environments, subaerial environments, subsurface environments, and iron-rich systems. Within the context of exploring past habitable environments on Mars, challenges common to all of these key environments are laid out, followed by a focused discussion for each environment regarding challenges to orbital and ground-based observations and sample selection. This leads into a short section on how these challenges could influence our strategies and priorities for the astrobiological exploration of Mars. Finally, a listing of urgent needs and future research highlights key elements such as development of instrumentation as well as continued exploration into how Mars may have evolved differently from Earth and what that might mean for biosignature preservation and detection. Key Words: Biosignature preservation-Biosignature detection-Mars analog environments-Conference report-Astrobiological exploration. Astrobiology 17, 363-400.
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Affiliation(s)
- Lindsay E. Hays
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, California
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24
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Potter-McIntyre SL, Williams J, Phillips-Lander C, O'Connell L. Taphonomy of Microbial Biosignatures in Spring Deposits: A Comparison of Modern, Quaternary, and Jurassic Examples. ASTROBIOLOGY 2017; 17:216-230. [PMID: 28323483 DOI: 10.1089/ast.2016.1495] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/22/2023]
Abstract
On Earth, microorganisms commonly enhance mineral precipitation and mediate mineralogical and chemical compositions of resulting deposits, particularly at spring systems. However, preservation of any type of microbial fossil or chemical or textural biosignature depends on the degree of alteration during diagenesis and factors such as exposure to diagenetic fluids. Little is known about the transformation of biosignatures during diagenesis over geologic time. Ten Mile Graben, Utah, USA, hosts a cold spring system that is an exceptional site for evaluation of diagenetic alteration of biosignatures because of the presence of modern springs with actively precipitating microbial mats and a series of progressively older tufa terraces (<400 ka) preserved in the area from the same spring system. A previously undescribed Jurassic laminated carbonate unit within the upper part of the Brushy Basin Member of the Morrison Formation is also exposed in Ten Mile Graben. This research characterizes the geology of these modern and Quaternary saline, Fe-undersaturated, circumneutral Ten Mile Graben cold springs and provides the first description in the literature of the Jurassic Brushy Basin Member of the Morrison Formation carbonate deposit. Taphonomy of microbial fossils is characterized by scanning electron microscopy (SEM). The data highlight two distinct methods of biosignature formation: (1) precipitation of minerals from an undersaturated solution owing to metabolic activity of the cells and (2) mineral precipitation on charged cell surfaces that produce distinctive microbial trace fossils. Although diagenesis can destroy or severely degrade biosignatures, particularly microbial fossils, some fossils and trace fossils are preserved because entombment by Ostwald ripening limits diagenetic alteration. Recognizing spring-fed, biogenic tufas is crucial for astrobiological research and the search for life on Mars. Key Words: Biosignatures-Taphonomy-Diagenesis-Carbonates-Hot springs. Astrobiology 17, 216-230.
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Affiliation(s)
| | - Jason Williams
- 1 Geology Department, Southern Illinois University , Carbondale, Illinois
| | - Charity Phillips-Lander
- 2 Conoco Phillips School of Geology and Geophysics, University of Oklahoma , Norman, Oklahoma
| | - Laura O'Connell
- 1 Geology Department, Southern Illinois University , Carbondale, Illinois
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