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Rice MC, Janik AJ, Elde NC, Gagnon JA, Balla KM. Microbe transmission from pet shop to lab-reared zebrafish reveals a pathogenic birnavirus. PLoS Biol 2024; 22:e3002606. [PMID: 38814944 PMCID: PMC11139271 DOI: 10.1371/journal.pbio.3002606] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2023] [Accepted: 03/27/2024] [Indexed: 06/01/2024] Open
Abstract
Zebrafish are popular research organisms selected for laboratory use due in part to widespread availability from the pet trade. Many contemporary colonies of laboratory zebrafish are maintained in aquaculture facilities that monitor and aim to curb infections that can negatively affect colony health and confound experiments. The impact of laboratory control on the microbial constituents associated with zebrafish in research environments compared to the pet trade are unclear. Diseases of unknown causes are common in both environments. We conducted a metatranscriptomic survey to broadly compare the zebrafish-associated microbes in pet trade and laboratory environments. We detected many microbes in animals from the pet trade that were not found in laboratory animals. Cohousing experiments revealed several transmissible microbes including a newly described non-enveloped, double-stranded RNA virus in the Birnaviridae family we name Rocky Mountain birnavirus (RMBV). Infections were detected in asymptomatic animals from the pet trade, but when transmitted to laboratory animals RMBV was associated with pronounced antiviral responses and hemorrhagic disease. These experiments highlight the pet trade as a distinct source of diverse microbes that associate with zebrafish and establish a paradigm for the discovery of newly described pathogenic viruses and other infectious microbes that can be developed for study in the laboratory.
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Affiliation(s)
- Marlen C. Rice
- School of Biological Sciences, University of Utah, Salt Lake City, Utah, United States of America
| | - Andrew J. Janik
- School of Biological Sciences, University of Utah, Salt Lake City, Utah, United States of America
- Department of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America
| | - Nels C. Elde
- Department of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America
- Howard Hughes Medical Institute, Chevy Chase, Maryland, United States of America
| | - James A. Gagnon
- School of Biological Sciences, University of Utah, Salt Lake City, Utah, United States of America
| | - Keir M. Balla
- Department of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America
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2
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Paull GC, Lee CJ, Tyler CR. Beyond compliance: harmonising research and husbandry practices to improve experimental reproducibility using fish models. Biol Rev Camb Philos Soc 2024; 99:253-264. [PMID: 37817305 DOI: 10.1111/brv.13020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2023] [Revised: 09/19/2023] [Accepted: 09/21/2023] [Indexed: 10/12/2023]
Abstract
Reproducibility in animal research is impacted by the environment, by husbandry practices in the laboratory and by the animals' provenance. These factors, however, are often not adequately considered by researchers. A disconnect between researchers and animal care staff can result in inappropriate housing and husbandry decisions for scientific studies with those animals. This is especially the case for the research in neuro-behaviour, epigenetics, and the impact of climate change, as heritable phenotypic, behavioural or physiological changes are known to result from the animals' environmental housing, husbandry, provenance and prior experience. This can lead to greater variation (even major differences) in data outcomes among studies, driving scientific uncertainties. Herein, we illustrate some of the endpoints measured in fish studies known to be intrinsically linked to the environment and husbandry conditions and assess the significance of housing and husbandry practice decisions for research adopting these endpoints for different fish species. We highlight the different priorities and challenges faced by researchers and animal care staff and how harmonising their activities and building greater understanding of how husbandry practices affect the fish will improve reproducibility in research outcomes. We furthermore illustrate how improving engagement between stakeholders, including regulatory bodies, can better underpin fish husbandry decisions and where researchers could help to drive best husbandry practices through their own research with fish models.
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Affiliation(s)
- Gregory C Paull
- Biosciences, Geoffrey Pope Building, University of Exeter, Stocker Road, Exeter, EX4 4QD, UK
| | - Carole J Lee
- Biosciences, Geoffrey Pope Building, University of Exeter, Stocker Road, Exeter, EX4 4QD, UK
| | - Charles R Tyler
- Biosciences, Geoffrey Pope Building, University of Exeter, Stocker Road, Exeter, EX4 4QD, UK
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3
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Naumann U, Brazzell JL, Crim MJ, Hoppe B. Comprehensive Colony Health Management and Emerging Pathogens of the Annual Killifish Species Nothobranchius furzeri. JOURNAL OF THE AMERICAN ASSOCIATION FOR LABORATORY ANIMAL SCIENCE : JAALAS 2024; 63:20-33. [PMID: 38101805 PMCID: PMC10844736 DOI: 10.30802/aalas-jaalas-23-000067] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/11/2023] [Revised: 08/17/2023] [Accepted: 11/12/2023] [Indexed: 12/17/2023]
Abstract
The Leibniz Institute on Aging has maintained killifish colonies for over 15 y. Our veterinarians, scientists, and animal technicians developed a fish health scoring system and routine colony health surveillance program for our colonies. Over a 4-y period, health data from the African turquoise killifish Nothobranchius furzeri colony were systematically collected and analyzed. The fish health assessment system facilitated categorization of clinical signs and differentiation of fish with mild clinical signs from fish that required euthanasia. This report provides new information on clinical signs and conditions that may occur in young and aged N. furzeri. To be comprehensive, a colony health surveillance program incorporates animal health at both the individual and the population levels. The quarterly routine health monitoring program identified Mycobacterium spp. as the most common agent in our facility and identified the killifish pathogen (Loma acerinae) for the first time. Taken together, these findings demonstrate the importance of a comprehensive colony health management system in a fish research facility. By improving the health and welfare of fish used for research, the scientific community will benefit from less variable and more reliably reproducible research results.
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Key Words
- a. hydrophila, aeromonas hydrophila
- eu, epidemiologic unit
- h&e, hematoxylin and eosin
- l. acerinae, loma acerinae
- m. abscessus, mycobacterium abscessus
- m. chelonae, mycobacterium chelonae
- m. fortuitum, mycobacterium fortuitum
- m. gordonae, mycobacterium gordonae
- n. furzeri, nothobranchius furzeri
- wph, weeks posthatching
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Affiliation(s)
- Uta Naumann
- Animal Facility Fish, Leibniz Institute on Aging – Fritz Lipmann Institute, Jena, Germany; and
| | | | | | - Beate Hoppe
- Animal Facility Fish, Leibniz Institute on Aging – Fritz Lipmann Institute, Jena, Germany; and
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4
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Schuster CJ, Leong C, Kasschau KD, Sharpton TJ, Kent ML. Early detection of Pseudocapillaria tomentosa by qPCR in four lines of zebrafish, Danio rerio (Hamilton 1882). JOURNAL OF FISH DISEASES 2023; 46:619-627. [PMID: 36821594 DOI: 10.1111/jfd.13773] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2022] [Revised: 02/09/2023] [Accepted: 02/13/2023] [Indexed: 05/07/2023]
Abstract
The intestinal nematode Pseudocapillaria tomentosa in zebrafish (Danio rerio) causes profound intestinal lesions, emaciation and death and is a promoter of a common intestinal cancer in zebrafish. This nematode has been detected in zebrafish from about 15% of the laboratories. Adult worms are readily detected about 3 weeks after exposure by either histology or wet mount preparations of the intestine, and larval worms are inconsistently observed in fish before this time. A quantitative PCR (qPCR) test was recently developed to detect the worm in fish and water, and here we determined that the test on zebrafish intestines was effective for earlier detection. Four lines of zebrafish (AB, TU, 5D and Casper) were experimentally infected and evaluated by wet mounts and qPCR at 8, 15-, 22-, 31- and 44-day post-exposure (dpe). At the first two time points, only 8% of the wet mounts from exposed fish were identified as infected, while the same intestines screened by qPCR showed 78% positivity, with low and consistent cycle threshold (Ct) values at these times. Wet mounts at later time points showed a high prevalence of infection, but this was still surpassed by qPCR.
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Affiliation(s)
- Corbin J Schuster
- Zebrafish International Resource Center, University of Oregon, Eugene, Oregon, USA
| | - Connor Leong
- Department of Microbiology, Oregon State University, Corvallis, Oregon, USA
| | - Kristin D Kasschau
- Department of Microbiology, Oregon State University, Corvallis, Oregon, USA
| | - Thomas J Sharpton
- Department of Microbiology, Oregon State University, Corvallis, Oregon, USA
- Department of Statistics Sciences, Oregon State University, Corvallis, Oregon, USA
| | - Michael L Kent
- Zebrafish International Resource Center, University of Oregon, Eugene, Oregon, USA
- Department of Microbiology, Oregon State University, Corvallis, Oregon, USA
- Department of Biomedical Sciences, Oregon State University, Corvallis, Oregon, USA
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5
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Kütter MT, Barcellos LJG, Boyle RT, Marins LF, Silveira T. Good practices in the rearing and maintenance of zebrafish (Danio rerio) in Brazilian laboratories. CIÊNCIA ANIMAL BRASILEIRA 2023. [DOI: 10.1590/1809-6891v24e-74134e] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/19/2023] Open
Abstract
Abstract Good Laboratory Practice (GLP) is a management quality control system that encompasses the organizational process and conditions under which non-clinical health and environmental studies are carried out. According to the World Health Organization, GLP must contain five topics: resources, characterization, rules, results, and quality control. This work aims to address a review according to WHO standards of implementing Good Laboratory Practices in zebrafish (Danio rerio) vivariums. Considering that the promotion of one health (animal, human, and environmental) associated with an education plan, protocols, and records are fundamental to guarantee the safety and integrity of employees, animals, and the environment as well as reliability in the results generated. In a way, Brazil still needs improvements related to the well-being of aquatic organisms (national laws, international agreements, corporate programs, and others), especially concerning its use in research and technological development. In this way, the implementation of GLPs provides valuable guidance for improving animal welfare and worker safety, facilitating the standardization of research.
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6
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Crim MJ, Hart ML. Health Monitoring for Laboratory Salamanders. Methods Mol Biol 2023; 2562:41-74. [PMID: 36272067 DOI: 10.1007/978-1-0716-2659-7_3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Laboratory animal health monitoring programs are necessary to protect animal health and welfare, the validity of experimental data, and human health against zoonotic infections. Health monitoring programs should be designed based on a risk assessment and knowledge about the biology and transmission of salamander pathogens. Both traditional and molecular diagnostic platforms are available for salamanders, and they provide complementary information. A comprehensive approach to health monitoring leverages the advantages of multiple platforms to provide a more complete picture of colony health and pathogen status. This chapter presents key considerations in the design and implementation of a colony health monitoring program for laboratory salamanders, including protocols for necropsy and sample collection.
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Kütter MT, Barcellos LJG, Boyle RT, Marins LF, Silveira T. Boas práticas na criação e manutenção de zebrafish (Danio rerio) em laboratório no Brasil. CIÊNCIA ANIMAL BRASILEIRA 2023. [DOI: 10.1590/1809-6891v24e-74134p] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/19/2023] Open
Abstract
Resumo As Boas Práticas de Laboratório (BPL) são um sistema de controle de qualidade gerencial que abrange o processo organizacional e as condições sob as quais os estudos não clínicos de saúde e meio ambiente são desenvolvidos. Conforme a Organização Mundial da Saúde (OMS) as BPL devem conter cinco tópicos: recursos, caracterização, regras, resultados e controle de qualidade. O objetivo deste trabalho foi apresentar uma revisão conforme o padrão da OMS para a implementação das BPL em biotério de zebrafish. Considerando que a promoção da saúde única (animal, humana e ambiental) associada a um plano de educação, protocolos e registros são fundamentais para garantir a segurança e a integridade dos trabalhadores/pesquisadores, animais e meio ambiente assim como confiabilidade nos resultados gerados. De certa forma o Brasil ainda necessita de melhorias relacionadas ao bem-estar de organismos aquáticos (leis nacionais, acordos internacionais, programas corporativos e outros); especialmente em relação à utilização deste na pesquisa e desenvolvimento tecnológico. Desta forma, a implementação de BPL fornece uma orientação valiosa para a melhoria do bem-estar animal, e segurança do trabalhador vindo a facilitar a padronização da pesquisa.
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8
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Schuster CJ, Kreul TG, Al-Samarrie CE, Peterson JT, Sanders JL, Kent ML. Progression of infection and detection of Pseudoloma neurophilia in zebrafish Danio rerio Hamilton by PCR and histology. JOURNAL OF FISH DISEASES 2022; 45:1463-1475. [PMID: 35749556 DOI: 10.1111/jfd.13675] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/14/2022] [Revised: 06/09/2022] [Accepted: 06/10/2022] [Indexed: 06/15/2023]
Abstract
Pseudoloma neurophilia is a critical threat to the zebrafish (Danio rerio) model, as it is the most common infectious agent found in research facilities. In this study, our objectives were two-fold: (1) compare the application of diagnostic tools for P. neurophilia and (2) track the progression of infection using PCR and histology. The first experiment showed that whole-body analysis by qPCR (WB-qPCR) can be a standardized process, providing a streamlined diagnostic protocol, without the need for extraction of specific tissues. Evaluating the course of infection in experimentally infected fish, we showed key dynamics in infection. Starting with a low dose exposure of 8000 spores/fish, the prevalence remained low until 92 days post-exposure (dpe), followed by a 30%-40% prevalence by histology or 40%-90% by PCR until the end of the experiment at 334 dpe. WB-qPCR positively detected infection in more fish than histology throughout the study, as WB-qPCR detected the parasite as early as 4 dpe, whereas it was undetected by histology until 92 dpe. We also added a second slide for histologic analyses, showing an increase in detection rate from 24% to 26% when we combined all data from our experiments, but this increase was not statistically significant.
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Affiliation(s)
- Corbin J Schuster
- Department of Microbiology, Oregon State University, Corvallis, OR, USA
| | - Taylor G Kreul
- Department of Microbiology, Oregon State University, Corvallis, OR, USA
| | | | - James T Peterson
- U.S. Geological Survey, Oregon Cooperative Fish and Wildlife Unit, Department of Fish and Wildlife, Oregon State University, Corvallis, OR, USA
| | - Justin L Sanders
- Department of Biomedical Sciences, Oregon State University, Corvallis, OR, USA
| | - Michael L Kent
- Department of Microbiology, Oregon State University, Corvallis, OR, USA
- Department of Biomedical Sciences, Oregon State University, Corvallis, OR, USA
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9
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Mocho JP, von Krogh K. A FELASA Working Group Survey on Fish Species Used for Research, Methods of Euthanasia, Health Monitoring, and Biosecurity in Europe, North America, and Oceania. BIOLOGY 2022; 11:biology11091259. [PMID: 36138738 PMCID: PMC9495953 DOI: 10.3390/biology11091259] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/03/2022] [Revised: 08/18/2022] [Accepted: 08/19/2022] [Indexed: 11/20/2022]
Abstract
Simple Summary An international survey was conducted regarding species used for research, methods of euthanasia, health monitoring, and biosecurity in fish laboratories. A total of 145 facilities from 23 countries contributed. Over 80 different species were reported to be used for research, of which zebrafish (Danio rerio) was the most common by far. Anesthetic overdose was the preferred method for euthanasia for adults, fry, and larvae not capable of independent feeding. For all developmental stages, the most popular anesthetic compound was tricaine. Around half of the respondents did not perform a completion method to ensure death. One-quarter of the responding facilities did not have a health monitoring system in place. Only a small fraction reported quarantine routines to ensure reliable biological barriers. There was little consensus amongst facilities in how to perform biosecurity measures. Abstract An international survey was conducted regarding species used for research, methods of euthanasia, health monitoring, and biosecurity in fish laboratories. A total of 145 facilities from 23 countries contributed. Collectively, over 80 different species (or groups of species) were reported to be used for research, of which zebrafish (Danio rerio) was the most common by far. About half of the participating laboratories used multiple species. Anesthetic overdose was the preferred method for euthanasia for adult, fry (capable of independent feeding), and larval (not capable of independent feeding) fish. For all developmental stages, the most popular anesthetic compound was tricaine (MS-222), a substance associated with distress and aversion in several species. Moreover, around half of the respondents did not perform a completion method to ensure death. One-quarter of the responding facilities did not have a health monitoring system in place. While most respondents had some form of quarantine process for imported fish, only a small fraction reported quarantine routines that ensure reliable biological barriers. Furthermore, less than one in five screened fish for pathogens while in quarantine. In sum, there was little consensus amongst facilities in how to perform biosecurity measures. Regarding euthanasia, health monitoring, and biosecurity processes, there is a need for updated and universal guidelines and for many laboratories to adjust their practices.
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10
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Lee CJ, Paull GC, Tyler CR. Improving zebrafish laboratory welfare and scientific research through understanding their natural history. Biol Rev Camb Philos Soc 2022; 97:1038-1056. [PMID: 34983085 PMCID: PMC9303617 DOI: 10.1111/brv.12831] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2021] [Revised: 12/17/2021] [Accepted: 12/23/2021] [Indexed: 12/13/2022]
Abstract
Globally, millions of zebrafish (Danio rerio) are used for scientific laboratory experiments for which researchers have a duty of care, with legal obligations to consider their welfare. Considering the growing use of the zebrafish as a vertebrate model for addressing a diverse range of scientific questions, optimising their laboratory conditions is of major importance for both welfare and improving scientific research. However, most guidelines for the care and breeding of zebrafish for research are concerned primarily with maximising production and minimising costs and pay little attention to the effects on welfare of the environments in which the fish are maintained, or how those conditions affect their scientific research. Here we review the physical and social conditions in which laboratory zebrafish are kept, identifying and drawing attention to factors likely to affect their welfare and experimental science. We also identify a fundamental lack knowledge of how zebrafish interact with many biotic and abiotic features in their natural environment to support ways to optimise zebrafish health and well-being in the laboratory, and in turn the quality of scientific data produced. We advocate that the conditions under which zebrafish are maintained need to become a more integral part of research and that we understand more fully how they influence experimental outcome and in turn interpretations of the data generated.
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Affiliation(s)
- Carole J. Lee
- Biosciences, Geoffrey Pope BuildingUniversity of ExeterStocker RoadExeterEX4 4QDU.K.
| | - Gregory C. Paull
- Biosciences, Geoffrey Pope BuildingUniversity of ExeterStocker RoadExeterEX4 4QDU.K.
| | - Charles R. Tyler
- Biosciences, Geoffrey Pope BuildingUniversity of ExeterStocker RoadExeterEX4 4QDU.K.
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11
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Goodwin N, Westall L. Design and Husbandry Considerations for a Containment Level 2 Aquatic Facility. Zebrafish 2022; 19:56-66. [PMID: 35439044 PMCID: PMC9070741 DOI: 10.1089/zeb.2021.0086] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
The greatly increased use of aquatic species to study disease over the past 20 years necessitates understanding their husbandry and housing requirements to optimize research and welfare and to ensure compliance with regulations. To achieve these goals, aquatic systems have expanded from pet shop and home aquaria to research-grade systems incorporating designs and features to increase their robustness, practicality, and flexibility. Moreover, these last decades have seen the increasing use of aquatic animals for infectious disease research using containment level 2 (CL2)/biosafety level 2 pathogens. In this study, we discuss the facility design requirements and modifications, which must be considered for the planning, construction, and use of an aquatic facility for zebrafish infected with CL2 pathogens. These include decontamination of water and equipment, racking and filtration design, personal protective equipment, and husbandry procedures. This guidance is based on our experience in the design and ongoing management of such facilities.
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Affiliation(s)
- Nicola Goodwin
- University Biomedical Services, University of Cambridge, Cambridge, United Kingdom of Great Britain and Northern Ireland
| | - Lynda Westall
- Research Support Facility, Wellcome Trust Sanger Institute, Cambridge, United Kingdom of Great Britain and Northern Ireland, Retired
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12
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Estes JM, Altemara ML, Crim MJ, Fletcher CA, Whitaker JW. Behavioral and Reproductive Effects of Environmental Enrichment and Pseudoloma neurophilia infection on Adult Zebrafish ( Danio rerio). JOURNAL OF THE AMERICAN ASSOCIATION FOR LABORATORY ANIMAL SCIENCE 2021; 60:249-258. [PMID: 33952385 DOI: 10.30802/aalas-jaalas-20-000113] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Recent studies have shown beneficial effects of environmental enrichment (EE) for zebrafish, while infection of zebrafish with the common pathogen Pseudoloma neurophilia has negative effects. This study investigates the effects of P. neurophilia infection and EE in housing and breeding tanks on measures of behavior, growth, and reproduction. Zebrafish were socially housed and were either infected, P. neurophilia-infected (PNI) (n = 12 tanks), or SPF for P. neurophilia (SPF) (n = 24 tanks). Fish were housed with or without EE, which consisted of placing plastic plants in the tanks; sprigs from plants were placed in half of the breeding tanks for half of breedings, alternating breeding tanks without EE weekly. Behavioral testing included the Novel Tank Diving Test (NTT) and Light/Dark Preference Test (LDT) conducted prior to breeding. At the end of the study, biometric data were collected. Histopathology and molecular analysis for common diseases in fish confirmed that SPF fish remained SPF and that fish from all PNI tanks were infected. PNI fish produced significantly fewer eggs and had lower body weights and lengths than did SPF fish. Fish with EE had longer body lengths, than did fish without EE, and male fish had longer body lengths than female fish. The biometric results and reproductive measures show that SPF fish exhibited better growth and suggest that EE in housing tanks could improve fish growth. The behavioral test results were inconclusive regard- ing whether infection status or EE altered anxiety-like behavior. Our results support other recent studies showing negative effects of P. neurophilia infection on zebrafish.
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Affiliation(s)
- Jenny M Estes
- Division of Comparative Medicine, University of North Carolina, Chapel Hill, North Carolina;,
| | - Michelle L Altemara
- Division of Comparative Medicine, University of North Carolina, Chapel Hill, North Carolina
| | | | - Craig A Fletcher
- Division of Comparative Medicine, University of North Carolina, Chapel Hill, North Carolina
| | - Julia W Whitaker
- Division of Comparative Medicine, University of North Carolina, Chapel Hill, North Carolina
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13
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Silveira T, Kütter MT, Martins CMG, Marins LF, Boyle RT, Campos VF, Remião MH. First Record of Clinostomum sp. (Digenea: Clinostomidae) in Danio rerio (Actinopterygii: Cyprinidae) and the Implication of Using Zebrafish from Pet Stores on Research. Zebrafish 2021; 18:139-148. [PMID: 33656385 DOI: 10.1089/zeb.2020.1950] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/06/2023] Open
Abstract
Many scientific studies still use zebrafish from pet stores as animal models, even cutting-edge researches. However, these animals differ genotypically and phenotypically between them. The importance of the use of standardized models is widely recognized. Besides that, another consequence of using zebrafish from unknown origins is the acquisition of parasitized animals. This study aimed to relate the infection by Clinostomum sp. in zebrafish. Animals sold as "high standard" were acquired from a commercial company. Swimming alterations and superficial yellow dots were observed in five zebrafish with clinical signs, which were isolated, euthanized, and necropsied. Muscular yellow cysts with metacercaria associated with lesions were observed. The muscular cysts were responsible for the superficial yellow dots as well as the swimming alterations. The prevalence was 2.5%, and the mean infection intensity was 7 digeneans/host. The cysts measured a mean of 1251.43 μm long × 784.28 μm wide. Metacercariae measured a mean of 4847 μm long × 1353 μm wide. This first report about infection by Clinostomum sp. in zebrafish is globally relevant since the host and the parasite genus currently overlap worldwide. Furthermore, this study sheds light on the importance of the specific pathogen-free commercial creations or laboratory-reared zebrafish for research.
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Affiliation(s)
- Tony Silveira
- Instituto de Ciências Biológicas, Universidade Federal do Rio Grande-FURG, Rio Grande, Brazil
| | - Mateus T Kütter
- Instituto de Ciências Biológicas, Universidade Federal do Rio Grande-FURG, Rio Grande, Brazil
| | - Camila M G Martins
- Instituto de Ciências Biológicas, Universidade Federal do Rio Grande-FURG, Rio Grande, Brazil
| | - Luis Fernando Marins
- Instituto de Ciências Biológicas, Universidade Federal do Rio Grande-FURG, Rio Grande, Brazil
| | - Robert T Boyle
- Instituto de Ciências Biológicas, Universidade Federal do Rio Grande-FURG, Rio Grande, Brazil
| | - Vinicius F Campos
- Centro de Desenvolvimento Tecnológico, Universidade Federal de Pelotas-UFPEL, Capão do Leão, Brazil
| | - Mariana H Remião
- Centro de Desenvolvimento Tecnológico, Universidade Federal de Pelotas-UFPEL, Capão do Leão, Brazil
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Peneyra SM, Lerpiriyapong K, Riedel ER, Lipman NS, Lieggi C. Impact of Pronase, Sodium Thiosulfate, and Methylene Blue Combinations on Development and Survival of Sodium Hypochlorite Surface-Disinfected Zebrafish ( Danio rerio) Embryos. Zebrafish 2020; 17:342-353. [PMID: 33048660 PMCID: PMC7578187 DOI: 10.1089/zeb.2020.1917] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Embryo surface disinfection is utilized in aquaculture to decrease the risk of pathogen introduction into established colonies. Zebrafish embryos are commonly disinfected with unbuffered sodium hypochlorite at 25-50 ppm for 10 min with or without concurrent treatment with chemicals, including pronase (Pron), sodium thiosulfate, and/or methylene blue; however, the impact of these chemicals on embryo survival and development has not been evaluated. In this study, AB and casper embryos were exposed to disinfection protocols that used Pron, sodium thiosulfate, and/or methylene blue (given alone, in various combinations, or all three combined) with 50 and 100 ppm sodium hypochlorite performed 6 and 24 h postfertilization (HPF). All groups were evaluated for survival, hatching, and malformations at 5 days postfertilization. Maximal survival (69%-97%) and hatching rates (66%-94%) were generally observed with sodium hypochlorite disinfection followed by exposure to both Pron and sodium thiosulfate and maintenance in standard embryo medium without methylene blue. Methylene blue had variable effects on survival and hatching. Higher survival and hatching rates were seen in AB embryos disinfected at 6 HPF and casper embryos disinfected at 24 HPF. Susceptibility to sodium hypochlorite toxicity differed by strain, emphasizing the need to test disinfection protocols on small embryo cohorts.
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Affiliation(s)
- Samantha M. Peneyra
- Tri-Institutional Training Program in Laboratory Animal Medicine and Science, New York, New York, USA
- Center of Comparative Medicine and Pathology, Memorial Sloan Kettering Cancer Center, Weill Cornell Medicine, and the Hospital For Special Surgery, New York, New York, USA
| | - Kvin Lerpiriyapong
- Tri-Institutional Training Program in Laboratory Animal Medicine and Science, New York, New York, USA
- Center of Comparative Medicine and Pathology, Memorial Sloan Kettering Cancer Center, Weill Cornell Medicine, and the Hospital For Special Surgery, New York, New York, USA
| | - Elyn R. Riedel
- Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York, New York, USA
| | - Neil S. Lipman
- Tri-Institutional Training Program in Laboratory Animal Medicine and Science, New York, New York, USA
- Center of Comparative Medicine and Pathology, Memorial Sloan Kettering Cancer Center, Weill Cornell Medicine, and the Hospital For Special Surgery, New York, New York, USA
| | - Christine Lieggi
- Tri-Institutional Training Program in Laboratory Animal Medicine and Science, New York, New York, USA
- Center of Comparative Medicine and Pathology, Memorial Sloan Kettering Cancer Center, Weill Cornell Medicine, and the Hospital For Special Surgery, New York, New York, USA
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15
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Midttun HLE, Vindas MA, Whatmore PJ, Øverli Ø, Johansen IB. Effects of Pseudoloma neurophilia infection on the brain transcriptome in zebrafish (Danio rerio). JOURNAL OF FISH DISEASES 2020; 43:863-875. [PMID: 32542843 DOI: 10.1111/jfd.13198] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/20/2020] [Revised: 05/09/2020] [Accepted: 05/11/2020] [Indexed: 06/11/2023]
Abstract
Laboratory zebrafish are commonly infected with the intracellular, brain-infecting microsporidian parasite Pseudoloma neurophilia. Chronic P. neurophilia infections induce inflammation in meninges, brain and spinal cord, and have been suggested to affect neural functions since parasite clusters reside inside neurons. However, underlying neural and immunological mechanisms associated with infection have not been explored. Utilizing RNA-sequencing analysis, we found that P. neurophilia infection upregulated 175 and downregulated 45 genes in the zebrafish brain, compared to uninfected controls. Four biological pathways were enriched by the parasite, all of which were associated with immune function. In addition, 14 gene ontology (GO) terms were enriched, eight of which were associated with immune responses and five with circadian rhythm. Surprisingly, no differentially expressed genes or enriched pathways were specific for nervous system function. Upregulated immune-related genes indicate that the host generally show a pro-inflammatory immune response to infection. On the other hand, we found a general downregulation of immune response genes associated with anti-pathogen functions, suggesting an immune evasion strategy by the parasite. The results reported here provide important information on host-parasite interaction and highlight possible pathways for complex effects of parasite infections on zebrafish phenotypes.
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Affiliation(s)
- Helene L E Midttun
- Faculty of Veterinary Medicine, Department of Paraclinical Sciences, Norwegian University of Life Sciences, Oslo, Norway
| | - Marco A Vindas
- Faculty of Veterinary Medicine, Department of Paraclinical Sciences, Norwegian University of Life Sciences, Oslo, Norway
| | - Paul J Whatmore
- Faculty of Science, Health, Education and Engineering, Genecology Research Center, University of the Sunshine Coast, Maroochydore, Queensland, Australia
| | - Øyvind Øverli
- Faculty of Veterinary Medicine, Department of Paraclinical Sciences, Norwegian University of Life Sciences, Oslo, Norway
| | - Ida B Johansen
- Faculty of Veterinary Medicine, Department of Paraclinical Sciences, Norwegian University of Life Sciences, Oslo, Norway
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16
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Kent M, Sanders J, Spagnoli S, Al-Samarrie C, Murray K. Review of diseases and health management in zebrafish Danio rerio (Hamilton 1822) in research facilities. JOURNAL OF FISH DISEASES 2020; 43:637-650. [PMID: 32291793 PMCID: PMC7253333 DOI: 10.1111/jfd.13165] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/22/2019] [Revised: 01/27/2020] [Accepted: 02/17/2020] [Indexed: 05/09/2023]
Abstract
The use of zebrafish (Danio rerio) in biomedical research has expanded at a tremendous rate over the last two decades. Along with increases in laboratories using this model, we are discovering new and important diseases. We review here the important pathogens and diseases based on some 20 years of research and findings from our diagnostic service at the NIH-funded Zebrafish International Resource Center. Descriptions of the present status of biosecurity programmes and diagnostic and treatment approaches are included. The most common and important diseases and pathogens are two parasites, Pseudoloma neurophilia and Pseudocapillaria tomentosa, and mycobacteriosis caused by Mycobacterium chelonae, M. marinum and M. haemophilum. Less common but deadly diseases are caused by Edwardsiella ictaluri and infectious spleen and kidney necrosis virus (ISKNV). Hepatic megalocytosis and egg-associated inflammation and fibroplasia are common, apparently non-infectious, in zebrafish laboratories. Water quality diseases include supersaturation and nephrocalcinosis. Common neoplasms are spindle cell sarcomas, ultimobranchial tumours, spermatocytic seminomas and a small-cell carcinoma that is caused by a transmissible agent. Despite the clear biosecurity risk, researchers continue to use fish from pet stores, and here, we document two novel coccidia associated with significant lesions in zebrafish from one of these stores.
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Affiliation(s)
- M.L Kent
- Department of Microbiology, Oregon State University, Corvallis, Oregon 97331
- Department of Biomedical Sciences, Oregon State University, Corvallis, Oregon 97331
| | - J.L. Sanders
- Department of Biomedical Sciences, Oregon State University, Corvallis, Oregon 97331
| | - S. Spagnoli
- Department of Biomedical Sciences, Oregon State University, Corvallis, Oregon 97331
| | - C.E. Al-Samarrie
- Department of Microbiology, Oregon State University, Corvallis, Oregon 97331
| | - K.N. Murray
- Zebrafish International Resource Center, Eugene, Oregon 97403
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17
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Kent ML, Sanders JL, Spagnoli S, Al-Samarrie CE, Murray KN. Review of diseases and health management in zebrafish Danio rerio (Hamilton 1822) in research facilities. JOURNAL OF FISH DISEASES 2020; 43:637-650. [PMID: 32291793 DOI: 10.1111/jfd.13165j] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Subscribe] [Scholar Register] [Received: 11/22/2019] [Revised: 01/27/2020] [Accepted: 02/17/2020] [Indexed: 05/22/2023]
Abstract
The use of zebrafish (Danio rerio) in biomedical research has expanded at a tremendous rate over the last two decades. Along with increases in laboratories using this model, we are discovering new and important diseases. We review here the important pathogens and diseases based on some 20 years of research and findings from our diagnostic service at the NIH-funded Zebrafish International Resource Center. Descriptions of the present status of biosecurity programmes and diagnostic and treatment approaches are included. The most common and important diseases and pathogens are two parasites, Pseudoloma neurophilia and Pseudocapillaria tomentosa, and mycobacteriosis caused by Mycobacterium chelonae, M. marinum and M. haemophilum. Less common but deadly diseases are caused by Edwardsiella ictaluri and infectious spleen and kidney necrosis virus (ISKNV). Hepatic megalocytosis and egg-associated inflammation and fibroplasia are common, apparently non-infectious, in zebrafish laboratories. Water quality diseases include supersaturation and nephrocalcinosis. Common neoplasms are spindle cell sarcomas, ultimobranchial tumours, spermatocytic seminomas and a small-cell carcinoma that is caused by a transmissible agent. Despite the clear biosecurity risk, researchers continue to use fish from pet stores, and here, we document two novel coccidia associated with significant lesions in zebrafish from one of these stores.
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Affiliation(s)
- M L Kent
- Department of Microbiology, Oregon State University, Corvallis, Oregon
- Department of Biomedical Sciences, Oregon State University, Corvallis, Oregon
| | - J L Sanders
- Department of Biomedical Sciences, Oregon State University, Corvallis, Oregon
| | - S Spagnoli
- Department of Biomedical Sciences, Oregon State University, Corvallis, Oregon
| | - C E Al-Samarrie
- Department of Microbiology, Oregon State University, Corvallis, Oregon
| | - K N Murray
- Zebrafish International Resource Center, Eugene, Oregon
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18
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Behavioural effects of the common brain-infecting parasite Pseudoloma neurophilia in laboratory zebrafish (Danio rerio). Sci Rep 2020; 10:8083. [PMID: 32415102 PMCID: PMC7228949 DOI: 10.1038/s41598-020-64948-8] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2020] [Accepted: 04/22/2020] [Indexed: 12/19/2022] Open
Abstract
Research conducted on model organisms may be biased due to undetected pathogen infections. Recently, screening studies discovered high prevalence of the microsporidium Pseudoloma neurophilia in zebrafish (Danio rerio) facilities. This spore-forming unicellular parasite aggregates in brain regions associated with motor function and anxiety, and despite its high occurrence little is known about how sub-clinical infection affects behaviour. Here, we assessed how P. neurophilia infection alters the zebrafish´s response to four commonly used neurobehavioral tests, namely: mirror biting, open field, light/dark preference and social preference, used to quantify aggression, exploration, anxiety, and sociability. Although sociability and aggression remained unaltered, infected hosts exhibited reduced activity, elevated rates of freezing behaviour, and sex-specific effects on exploration. These results indicate that caution is warranted in the interpretation of zebrafish behaviour, particularly since in most cases infection status is unknown. This highlights the importance of comprehensive monitoring procedures to detect sub-clinical infections in laboratory animals.
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19
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Diagnosis of Centrocestus formosanus Infection in Zebrafish ( Danio rerio) in Italy: A Window to a New Globalization-Derived Invasive Microorganism. Animals (Basel) 2020; 10:ani10030456. [PMID: 32182941 PMCID: PMC7143865 DOI: 10.3390/ani10030456] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/10/2020] [Revised: 03/04/2020] [Accepted: 03/07/2020] [Indexed: 12/13/2022] Open
Abstract
Simple Summary Centrocestus formosanus is an invasive parasite which originated from outside the European countries. Infections by this parasite seem to be related to the movements of its hosts. However, in Europe, the presence of C. formosanus has been sporadically reported and its zoonotic potential is still underestimated. Therefore, the present study proposes a fast and inexpensive diagnostic method through molecular analyses targeting the ribosomal internal transcribed sequence 2 (ITS2) using a newly designed species-specific primer pair. Given the potential negative consequences of C. formosanus global expansion, those responsible should adopt a one health approach to control the spread of this organism. Abstract Centrocestus formosanus is a digenetic trematode with a complex life cycle, involving invertebrate and vertebrate hosts, humans included. In particular, it causes gill lesions and mortality in freshwater fish species, and gastrointestinal symptoms in infected humans. Here, we describe the occurrence of C. formosanus infection in zebrafish imported in Italy and propose a newly designed species-specific primer pair to ameliorate the diagnostic investigations for C. formosanus. Gill arches of 30 zebrafish were examined for the presence of encysted metacercariae under a stereomicroscope and processed through molecular analyses targeting the ribosomal internal transcribed sequence 2 (ITS2). Although C. formosanus distribution was originally restricted to Asia, it has been subsequently reported in new countries, revealing itself as an invasive species and raising important concerns for biodiversity, economy, scientific research, as well as animal and public health. Given the crucial role played by the ornamental fish industry in spreading this parasite, there is an urgent need for control measures to prevent the introduction and establishment of C. formosanus in non-endemic areas, including Europe. We also suggest developing new strategies in microbiology and epidemiology to better explore this new globalization-derived invasive species.
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20
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Miller M, Sabrautzki S, Beyerlein A, Brielmeier M. Combining fish and environmental PCR for diagnostics of diseased laboratory zebrafish in recirculating systems. PLoS One 2019; 14:e0222360. [PMID: 31513657 PMCID: PMC6742364 DOI: 10.1371/journal.pone.0222360] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2019] [Accepted: 08/27/2019] [Indexed: 01/10/2023] Open
Abstract
Precise knowledge of the health status of experimental fish is crucial to obtain high scientific and ethical standards in biomedical research. In addition to the use of sentinel fish, the examination of diseased fish is a fundamental part of all health monitoring concepts. PCR assays offer excellent sensitivity and the ability to test a broad variety of pathogenic agents in different sample types. Recently, it was shown that analysis of environmental samples such as water, sludge or detritus from static tanks can complement PCR analysis of fish and is actually more reliable for certain pathogens. In our study, we investigated whether the analysis of filtered water mixed with detritus of tanks including fish showing clinical signs of illness is suitable to complement health monitoring programs in recirculating systems. The obtained data indicate that pathogens such as Pseudoloma neurophilia or Myxidium streisingeri were exclusively or mainly found in fish, while mycobacteria were predominantly present in environmental samples. A combination of both sample types seems to be required for the detection of a broad range of infectious agents in zebrafish colonies using real-time PCR technology.
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Affiliation(s)
- Manuel Miller
- Research Unit Comparative Medicine, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
- * E-mail:
| | - Sibylle Sabrautzki
- Research Unit Comparative Medicine, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
| | - Andreas Beyerlein
- Institute of Computational Biology, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
| | - Markus Brielmeier
- Research Unit Comparative Medicine, Helmholtz Zentrum München, German Research Center for Environmental Health, Neuherberg, Germany
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21
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Iaria C, Migliore S, Macri D, Bivona M, Capparucci F, Gaglio G, Marino F. Evidence of Centrocestus formosanus (Nishigori, 1924) in Zebrafish ( Danio rerio). Zebrafish 2019; 16:522-526. [PMID: 31237524 DOI: 10.1089/zeb.2019.1744] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/24/2023] Open
Abstract
This study reports the presence of cartilaginous cysts in zebrafish gills, purchased at the end of 2012 before the application of the Italian Legislative Decree 26/2014 and used for experimental research. It highlights the importance of using specific pathogen-free organisms from reliable production establishments to avoid obtaining false results in experiments. Of 20 samples analyzed, 4 showed cysts in gills, with abnormal tissue modification and cartilaginous metaplasia induced by prolonged parasitic insult. The results obtained from the periodic health monitoring program showed the presence of metacercariae of digenean trematodes, specifically identified as Centrocestus formosanus.
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Affiliation(s)
- Carmelo Iaria
- Department of Chemistry, Biology, Pharmacology and Environmental Science, University of Messina, Polo Universitario Papardo, Messina, Italy
| | | | - Daniele Macri
- Zooprophylactic Institute of Sicily (IZS), Palermo, Italy
| | | | - Fabiano Capparucci
- Department of Chemistry, Biology, Pharmacology and Environmental Science, University of Messina, Polo Universitario Papardo, Messina, Italy
| | - Gabriella Gaglio
- Department of Veterinary Science, Sicilian Centre for Experimental Fish Pathology (CISS), University of Messina, Polo Universitario dell'Annunziata, Messina, Italy
| | - Fabio Marino
- Department of Chemistry, Biology, Pharmacology and Environmental Science, University of Messina, Polo Universitario Papardo, Messina, Italy
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22
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Deakin AG, Buckley J, AlZu'bi HS, Cossins AR, Spencer JW, Al'Nuaimy W, Young IS, Thomson JS, Sneddon LU. Automated monitoring of behaviour in zebrafish after invasive procedures. Sci Rep 2019; 9:9042. [PMID: 31227751 PMCID: PMC6588586 DOI: 10.1038/s41598-019-45464-w] [Citation(s) in RCA: 32] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2018] [Accepted: 06/06/2019] [Indexed: 12/02/2022] Open
Abstract
Fish are used in a variety of experimental contexts often in high numbers. To maintain their welfare and ensure valid results during invasive procedures it is vital that we can detect subtle changes in behaviour that may allow us to intervene to provide pain-relief. Therefore, an automated method, the Fish Behaviour Index (FBI), was devised and used for testing the impact of laboratory procedures and efficacy of analgesic drugs in the model species, the zebrafish. Cameras with tracking software were used to visually track and quantify female zebrafish behaviour in real time after a number of laboratory procedures including fin clipping, PIT tagging, and nociceptor excitation via injection of acetic acid subcutaneously. The FBI was derived from activity and distance swum measured before and after these procedures compared with control and sham groups. Further, the efficacy of a range of drugs with analgesic properties to identify efficacy of these agents was explored. Lidocaine (5 mg/L), flunixin (8 mg/L) and morphine (48 mg/L) prevented the associated reduction in activity and distance swum after fin clipping. From an ethical perspective, the FBI represents a significant refinement in the use of zebrafish and could be adopted across a wide range of biological disciplines.
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Affiliation(s)
- Anthony G Deakin
- Electrical Engineering and Electronics, University of Liverpool, Liverpool, L69 3BX, UK.,Department of Evolution, Ecology and Behaviour, Institute of Integrative Biology, The BioScience Building, University of Liverpool, Liverpool, L69 7ZB, UK
| | - Jonathan Buckley
- Department of Evolution, Ecology and Behaviour, Institute of Integrative Biology, The BioScience Building, University of Liverpool, Liverpool, L69 7ZB, UK
| | - Hamzah S AlZu'bi
- Electrical Engineering and Electronics, University of Liverpool, Liverpool, L69 3BX, UK
| | - Andrew R Cossins
- Department of Functional and Comparative Genomics, Institute of Integrative Biology, The BioScience Building, University of Liverpool, Liverpool, L69 7ZB, UK
| | - Joseph W Spencer
- Electrical Engineering and Electronics, University of Liverpool, Liverpool, L69 3BX, UK
| | - Waleed Al'Nuaimy
- Electrical Engineering and Electronics, University of Liverpool, Liverpool, L69 3BX, UK
| | - Iain S Young
- Department of Functional and Comparative Genomics, Institute of Integrative Biology, The BioScience Building, University of Liverpool, Liverpool, L69 7ZB, UK
| | - Jack S Thomson
- School of Environmental Sciences, University of Liverpool, Nicholson Building, Brownlow Street, Liverpool, L69 3GP, UK
| | - Lynne U Sneddon
- Department of Evolution, Ecology and Behaviour, Institute of Integrative Biology, The BioScience Building, University of Liverpool, Liverpool, L69 7ZB, UK.
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23
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Chang CT, Lewis J, Whipps CM. Source or Sink: Examining the Role of Biofilms in Transmission of Mycobacterium spp. in Laboratory Zebrafish. Zebrafish 2019; 16:197-206. [PMID: 30835168 DOI: 10.1089/zeb.2018.1689] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
Zebrafish health is a primary research concern because diseases can have unintended impacts on experimental endpoints. Ideally, research would be conducted using disease-free fish or fish with known disease status. Mycobacteriosis is a common bacterial disease in wild and captive fishes, including zebrafish. Despite its prevalence, the dynamics of transmission and potential sources of mycobacterial infections in zebrafish are only partially understood. One suspected natural infection source is surface biofilms on tanks and other system components. This study investigates the role that tank biofilms play in mycobacteriosis in laboratory zebrafish by evaluating the establishment of biofilms from bacteria shed from fish, and conversely, the acquisition of infections in fish from surface biofilms. We found that zebrafish infected with Mycobacterium chelonae shed bacteria through feces, and bacteria are transmitted to tank biofilms from one to 16 weeks postinfection. We also found that zebrafish acquire M. chelonae infections as soon as 2 weeks when introduced to tanks with established M. chelonae biofilms. The results from this study highlight the role that tank biofilms play as both a reservoir and source of mycobacterial infections in zebrafish. Results support the inclusion of biofilm surveillance and prevention as part of a disease control program in zebrafish research facilities.
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Affiliation(s)
- Carolyn T Chang
- Department of Environment and Forest Biology, State University of New York College of Environmental Science, Syracuse, New York
| | - Jet'aime Lewis
- Department of Environment and Forest Biology, State University of New York College of Environmental Science, Syracuse, New York
| | - Christopher M Whipps
- Department of Environment and Forest Biology, State University of New York College of Environmental Science, Syracuse, New York
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24
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Iaria C, Saoca C, Guerrera MC, Ciulli S, Brundo MV, Piccione G, Lanteri G. Occurrence of diseases in fish used for experimental research. Lab Anim 2019; 53:619-629. [DOI: 10.1177/0023677219830441] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023]
Abstract
The objective of the present study was to evaluate the occurrence of pathogens and diseases in laboratory fish over a 10-year period at the Centre for Experimental Fish Pathology of Sicily, University of Messina. This report also emphasizes the adverse effects of subclinical infections on research endpoints, as well as the importance of animal health with respect to welfare. Infections in fish used for research can alter experimental outcomes, increase the variability of data, and impede experimental reproducibility. For this purpose, 411 diseased fish of different species (out of a total of 2820 fish) that belonged to four marine species ( Dicentrarchus labrax, Sparus aurata, Argyrosomus regius and Mugil cephalus) and to four fresh water species ( Danio rerio, Carassius auratus, Xiphophorus variatus and Poecilia reticulata) were examined in this study. Our results showed that mycobacteriosis and myxosporidiosis were the most important diseases found in our research fish, and the results represent a useful tool to obtain wider knowledge on the incidence of various diseases in different fish species. Further studies in this field are necessary to improve knowledge on the state of the health of fish used for research.
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Affiliation(s)
- Carmelo Iaria
- Department of Chemical, Biological, Pharmaceutical and Environmental Sciences, University of Messina, Italy
| | - Concetta Saoca
- Department of Veterinary Sciences, Experimental Ichthyopathology Center of Sicily, University of Messina, Italy
| | - Maria Cristina Guerrera
- Department of Veterinary Sciences, Experimental Ichthyopathology Center of Sicily, University of Messina, Italy
| | - Sara Ciulli
- Department of Veterinary Medical Sciences, University of Bologna, Italy
| | - Maria Violetta Brundo
- Department of Biological, Geological and Environmental Sciences, University of Catania, Italy
| | - Giuseppe Piccione
- Department of Veterinary Sciences, Experimental Ichthyopathology Center of Sicily, University of Messina, Italy
| | - Giovanni Lanteri
- Department of Veterinary Sciences, Experimental Ichthyopathology Center of Sicily, University of Messina, Italy
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25
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Hamm JT, Ceger P, Allen D, Stout M, Maull EA, Baker G, Zmarowski A, Padilla S, Perkins E, Planchart A, Stedman D, Tal T, Tanguay RL, Volz DC, Wilbanks MS, Walker NJ. Characterizing sources of variability in zebrafish embryo screening protocols. ALTEX 2018; 36:103-120. [PMID: 30415271 PMCID: PMC10424490 DOI: 10.14573/altex.1804162] [Citation(s) in RCA: 26] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/26/2018] [Accepted: 10/30/2018] [Indexed: 11/23/2022]
Abstract
There is a need for fast, efficient, and cost-effective hazard identification and characterization of chemical hazards. This need is generating increased interest in the use of zebrafish embryos as both a screening tool and an alternative to mammalian test methods. A Collaborative Workshop on Aquatic Models and 21st Century Toxicology identified the lack of appropriate and consistent testing protocols as a challenge to the broader application of the zebrafish embryo model. The National Toxicology Program established the Systematic Evaluation of the Application of Zebrafish in Toxicology (SEAZIT) initiative to address the lack of consistent testing guidelines and identify sources of variability for zebrafish-based assays. This report summarizes initial SEAZIT information-gathering efforts. Investigators in academic, government, and industry laboratories that routinely use zebrafish embryos for chemical toxicity testing were asked about their husbandry practices and standard protocols. Information was collected about protocol components including zebrafish strains, feed, system water, disease surveillance, embryo exposure conditions, and endpoints. Literature was reviewed to assess issues raised by the investigators. Interviews revealed substantial variability across design parameters, data collected, and analysis procedures. The presence of the chorion and renewal of exposure media (static versus static-renewal) were identified as design parameters that could potentially influence study outcomes and should be investigated further with studies to determine chemical uptake from treatment solution into embryos. The information gathered in this effort provides a basis for future SEAZIT activities to promote more consistent practices among researchers using zebrafish embryos for toxicity evaluation.
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Affiliation(s)
- Jon T Hamm
- Integrated Laboratory Systems, Research Triangle Park, NC, USA
| | - Patricia Ceger
- Integrated Laboratory Systems, Research Triangle Park, NC, USA
| | - David Allen
- Integrated Laboratory Systems, Research Triangle Park, NC, USA
| | - Matt Stout
- Division of the National Toxicology Program, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA
| | - Elizabeth A Maull
- National Toxicology Program Interagency Center for the Evaluation of Alternative Toxicological Methods, Division of the National Toxicology Program, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA
| | - Greg Baker
- Battelle, Life Sciences Research, Columbus, OH, USA
| | | | - Stephanie Padilla
- Integrated Systems Toxicology Division, National Health and Environmental Effects Research Laboratory, Office of Research and Development, U.S. Environmental Protection Agency, Research Triangle Park, NC, USA
| | - Edward Perkins
- United States Army Engineer Research and Development Center, Vicksburg, MS, USA
| | - Antonio Planchart
- Department of Biological Sciences and Center for Human Health and the Environment, North Carolina State University, Raleigh, NC, USA
| | | | - Tamara Tal
- Integrated Systems Toxicology Division, National Health and Environmental Effects Research Laboratory, Office of Research and Development, U.S. Environmental Protection Agency, Research Triangle Park, NC, USA
| | - Robert L Tanguay
- Department of Environmental & Molecular Toxicology, Oregon State University, Corvallis, OR, USA
| | - David C Volz
- Department of Environmental Sciences, University of California, Riverside, CA, USA
| | - Mitch S Wilbanks
- United States Army Engineer Research and Development Center, Vicksburg, MS, USA
| | - Nigel J Walker
- Division of the National Toxicology Program, National Institute of Environmental Health Sciences, National Institutes of Health, Research Triangle Park, NC, USA
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26
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Varga ZM, Lawrence C, Ekker SC, Eisen JS. Universal Healthcare for Zebrafish. Zebrafish 2018; 13 Suppl 1:S1-4. [PMID: 27351616 DOI: 10.1089/zeb.2016.1311] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Affiliation(s)
- Zoltán M Varga
- 1 Zebrafish International Resource Center, University of Oregon , Eugene, Oregon
| | - Christian Lawrence
- 2 Aquatic Resources Program, Boston Children's Hospital, Boston, Massachusetts
| | - Stephen C Ekker
- 3 Department of Biochemistry and Molecular Biology, Mayo Clinic Cancer Center , Rochester, Minnesota
| | - Judith S Eisen
- 4 Institute of Neuroscience, University of Oregon , Eugene, Oregon
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27
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Mocho JP, Martin DJ, Millington ME, Saavedra Torres Y. Environmental Screening of Aeromonas hydrophila, Mycobacterium spp., and Pseudocapillaria tomentosa in Zebrafish Systems. J Vis Exp 2017. [PMID: 29286459 PMCID: PMC5755534 DOI: 10.3791/55306] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/16/2022] Open
Abstract
Health monitoring systems are developed and used in zebrafish research facilities because pathogens of Danio rerio such as Aeromonas hydrophila, Mycobacterium spp., and Pseudocapillaria tomentosa have the potential to impair animal welfare and research. The fish are typically analyzed post mortem to detect microbes. The use of sentinels is a suggested way to improve the sensitivity of the surveillance and to reduce the number of animals to sample. The setting of a pre-filtration sentinel tank out of a recirculating system is described. The technique is developed to prevent water pollution and to represent the fish population by a careful selection of age, gender, and strains. In order to use the minimum number of animals, techniques to screen the environment are also detailed. Polymerase Chain Reaction (PCR) on surface sump swabs is used to significantly improve the detection of some prevalent and pathogenic mycobacterial species such as Mycobacterium fortuitum, Mycobacterium haemophilum, and Mycobacterium chelonae. Another environmental method consists of processing the sludge at the bottom of a holding tank or sump to look for P. tomentosa eggs. This is a cheap and fast technique that can be applied in quarantine where a breeding device is submerged into the holding tank of imported animals. Finally, PCR is applied to the sludge sample and A. hydrophila is detected at the sump's bottom and surface. Generally, these environmental screening techniques applied to these specific pathogens have led to an increased sensitivity compared to the testing of pre-filtration sentinels.
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Crim MJ, Lawrence C, Livingston RS, Rakitin A, Hurley SJ, Riley LK. Comparison of Antemortem and Environmental Samples for Zebrafish Health Monitoring and Quarantine. JOURNAL OF THE AMERICAN ASSOCIATION FOR LABORATORY ANIMAL SCIENCE : JAALAS 2017; 56:412-424. [PMID: 28724491 PMCID: PMC5517331] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Subscribe] [Scholar Register] [Received: 08/05/2016] [Revised: 10/14/2016] [Accepted: 01/12/2017] [Indexed: 06/07/2023]
Abstract
Molecular diagnostic assays offer both exquisite sensitivity and the ability to test a wide variety of sample types. Various types of environmental sample, such as detritus and concentrated water, might provide a useful adjunct to sentinels in routine zebrafish health monitoring. Similarly, antemortem sampling would be advantageous for expediting zebrafish quarantine, without euthanasia of valuable fish. We evaluated the detection of Mycobacterium chelonae, M. fortuitum, M. peregrinum, Pseudocapillaria tomentosa, and Pseudoloma neurophilia in zebrafish, detritus, pooled feces, and filter membranes after filtration of 1000-, 500-, and 150-mL water samples by real-time PCR analysis. Sensitivity varied according to sample type and pathogen, and environmental sampling was significantly more sensitive than zebrafish sampling for detecting Mycobacterium spp. but not for Pseudocapillaria neurophilia or Pseudoloma tomentosa. The results of these experiments provide strong evidence of the utility of multiple sample types for detecting pathogens according to each pathogen's life cycle and ecological niche within zebrafish systems. In a separate experiment, zebrafish subclinically infected with M. chelonae, M. marinum, Pleistophora hyphessobryconis, Pseudocapillaria tomentosa, or Pseudoloma neurophilia were pair-spawned and individually tested with subsets of embryos from each clutch that received no rinse, a fluidizing rinse, or were surface-disinfected with sodium hypochlorite. Frequently, one or both parents were subclinically infected with pathogen(s) that were not detected in any embryo subset. Therefore, negative results from embryo samples may not reflect the health status of the parent zebrafish.
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Affiliation(s)
- Marcus J Crim
- IDEXX BioResearch, Columbia, Missouri, Department of Veterinary Pathobiology, University of Missouri, Columbia, Missouri;,
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