A new method to estimate branch biomass from terrestrial laser scanning data by bridging tree structure models

Modeling the horizontal distribution of tree crown biomass from terrestrial laser scanning data

Tree crown biomass is rarely assessed individually in forest monitoring, but when it is to be reported, standard conversion factors are commonly used for predicting crown biomass as a function of stem biomass. Further, in the conventional methods, the predicted total tree biomass is assigned exclusively to the stem position. In reality, however, tree and in particular crown biomass is spatially distributed over the entire crown projection area. In this study, we investigated the "Horizontal Biomass Distribution (HBD)" model, which serves to depict this biomass as a spatial distribution over the crown projection area: here, the individual tree crown biomass is modeled as a continuous distribution within the area defined by the crown projection. We examined two empirical HBD prediction models: (1) Weibull distribution; and (2) Segmented polynomial regression; which describe the biomass contained up to a given crown radius on the horizontal projection of individual trees, i.e., spatial distribution of crown biomass as a function of the horizontal distance from the stem. The approach was demonstrated using terrestrial laser scanning (TLS) on a sample of 33 urban trees from eight species. We found that (1) the segmented polynomial regression model revealed better performance in defining the HBD for various tree species; (2) a certain variability in HBD patterns was observed between the sample trees, with the variability being more pronounced between species groups than within species; and (3) the methodological approaches using TLS proxies are suitable and convenient to non-destructively assess the HBD, which would be otherwise impractical by direct measurements.

Advancing fine branch biomass estimation with lidar and structural models

BACKGROUND AND AIMS

Lidar is a promising tool for fast and accurate measurements of trees. There are several approaches to estimate above-ground woody biomass using lidar point clouds. One of the most widely used methods involves fitting geometric primitives (e.g. cylinders) to the point cloud, thereby reconstructing both the geometry and topology of the tree. However, current algorithms are not suited for accurate estimation of the volume of finer branches, because of the unreliable point dispersions from, for example, beam footprint compared to the structure diameter.

METHOD

We propose a new method that couples point cloud-based skeletonization and multi-linear statistical modelling based on structural data to make a model (structural model) that accurately estimates the above-ground woody biomass of trees from high-quality lidar point clouds, including finer branches. The structural model was tested at segment, axis and branch level, and compared to a cylinder fitting algorithm and to the pipe model theory.

KEY RESULTS

The model accurately predicted the biomass with 1.6 % normalized root mean square error (nRMSE) at the segment scale from a k-fold cross-validation. It also gave satisfactory results when scaled up to the branch level with a significantly lower error (13 % nRMSE) and bias (-5 %) compared to conventional cylinder fitting to the point cloud (nRMSE: 92 %, bias: 82 %), or using the pipe model theory (nRMSE: 31 %, bias: -27 %). The model was then applied to the whole-tree scale and showed that the sampled trees had more than 1.7 km of structures on average and that 96 % of that length was coming from the twigs (i.e. <5 cm diameter). Our results showed that neglecting twigs can lead to a significant underestimation of tree above-ground woody biomass (-21 %).

CONCLUSIONS

The structural model approach is an effective method that allows a more accurate estimation of the volumes of smaller branches from lidar point clouds. This method is versatile but requires manual measurements on branches for calibration. Nevertheless, once the model is calibrated, it can provide unbiased and large-scale estimations of tree structure volumes, making it an excellent choice for accurate 3D reconstruction of trees and estimating standing biomass.

A Self-Adaptive Optimization Individual Tree Modeling Method for Terrestrial LiDAR Point Clouds

Individual tree modeling for terrestrial LiDAR point clouds always involves heavy computation burden and low accuracy toward a complex tree structure. To solve these problems, this paper proposed a self-adaptive optimization individual tree modeling method. In this paper, we first proposed a joint neighboring growing method to segment wood points into object primitives. Subsequently, local object primitives were optimized to alleviate the computation burden. To build the topology relation among branches, branches were separated based on spatial connectivity analysis. And then the nodes corresponding to each object primitive were adopted to construct the graph structure of the tree. Furthermore, each object primitive was fitted as a cylinder. To revise the local abnormal cylinder, a self-adaptive optimization method based on the constructed graph structure was proposed. Finally, the constructed tree model was further optimized globally based on prior knowledge. Twenty-nine field datasets obtained from three forest sites were adopted to evaluate the performance of the proposed method. The experimental results show that the proposed method can achieve satisfying individual tree modeling accuracy. The mean volume deviation of the proposed method is 1.427 m3. In the comparison with two other famous tree modeling methods, the proposed method can achieve the best individual tree modeling result no matter which accuracy indicator is selected.

Assessing the Dependencies of Scots Pine (Pinus sylvestris L.) Structural Characteristics and Internal Wood Property Variation

Wood density is well known to vary between tree species as well as within and between trees of a certain species depending on the growing environment causing uncertainties in forest biomass and carbon storage estimation. This has created a need to develop novel methodologies to obtain wood density information over multiple tree communities, landscapes, and ecoregions. Therefore, the aim of this study was to evaluate the dependencies between structural characteristics of Scots pine (Pinus sylvestris L.) tree communities and internal wood property (i.e., mean wood density and ring width) variations at breast height. Terrestrial laser scanning was used to derive the structural characteristics of even-aged Scots pine dominated forests with varying silvicultural treatments. Pearson’s correlations and linear mixed effect models were used to evaluate the interactions. The results show that varying silvicultural treatments did not have a statistically significant effect on the mean wood density. A notably stronger effect was observed between the structural characteristics and the mean ring width within varying treatments. It can be concluded that single time terrestrial laser scanning is capable of capturing the variability of structural characteristics and their interactions with mean ring width within different silvicultural treatments but not the variation of mean wood density.

Terrestrial laser scanning: a new standard of forest measuring and modelling?

BACKGROUND

Laser scanning technology has opened new horizons for the research of forest dynamics, because it provides a largely automated and non-destructive method to rapidly capture the structure of individual trees and entire forest stands at multiple spatial scales. The structural data themselves or in combination with additional remotely sensed data also provide information on the local physiological state of structures within trees. The capacity of new methods is facilitated by the ongoing development of automated processing tools that are designed to capture information from the point cloud data provided by the remote measurements.

SCOPE

Terrestrial laser scanning (TLS), performed from the ground or from unmanned aerial vehicles, in particular, has potential to become a unifying measurement standard for forest research questions, because the equipment is flexible to use in the field and has the capacity to capture branch-level structural information at the forestplot or even forest scale. This issue of Annals of Botany includes selected papers that exemplify the current and potential uses of TLS, such as for examination of crown interactions between trees, growth dynamics of mixed stands, non-destructive characterization of urban trees, and enhancement of ecological and evolutionary models. The papers also present current challenges in the applicability of TLS methods and report recent developments in methods facilitating the use of TLS data for research purposes, including automatic processing chains and quantifying branch and above-ground biomass. In this article, we provide an overview of the current and anticipated future capacity of TLS and related methods in solving questions that utilize measurements and models of forests.

CONCLUSIONS

Due to its measurement speed, TLS provides a method to effortlessly capture large amounts of detailed structural forest information, and consequent proxy data for tree and forest processes, at a far wider spatial scale than is feasible with manual measurements. Issues with measurement precision and occlusion of laser beams before they reach their target structures continue to reduce the accuracy of TLS data, but the limitations are counterweighted by the measurement speed that enables large sample sizes. The currently high time-cost of analysing TLS data, in turn, is likely to decrease through progress in automated processing methods. The developments point towards TLS becoming a new and widely accessible standard tool in forest measurement and modelling.