1
|
Bastias CC, Estarague A, Vile D, Gaignon E, Lee CR, Exposito-Alonso M, Violle C, Vasseur F. Ecological trade-offs drive phenotypic and genetic differentiation of Arabidopsis thaliana in Europe. Nat Commun 2024; 15:5185. [PMID: 38890286 PMCID: PMC11189578 DOI: 10.1038/s41467-024-49267-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2022] [Accepted: 05/23/2024] [Indexed: 06/20/2024] Open
Abstract
Plant diversity is shaped by trade-offs between traits related to competitive ability, propagule dispersal, and stress resistance. However, we still lack a clear understanding of how these trade-offs influence species distribution and population dynamics. In Arabidopsis thaliana, recent genetic analyses revealed a group of cosmopolitan genotypes that successfully recolonized Europe from its center after the last glaciation, excluding older (relict) lineages from the distribution except for their north and south margins. Here, we tested the hypothesis that cosmopolitans expanded due to higher colonization ability, while relicts persisted at the margins due to higher tolerance to competition and/or stress. We compared the phenotypic and genetic differentiation between 71 European genotypes originating from the center, and the south and north margins. We showed that a trade-off between plant fecundity and seed mass shapes the differentiation of A. thaliana in Europe, suggesting that the success of the cosmopolitan groups could be explained by their high dispersal ability. However, at both north and south margins, we found evidence of selection for alleles conferring low dispersal but highly competitive and stress-resistance abilities. This study sheds light on the role of ecological trade-offs as evolutionary drivers of the distribution and dynamics of plant populations.
Collapse
Affiliation(s)
- Cristina C Bastias
- CEFE, Univ Montpellier, CNRS, EPHE, IRD, Montpellier, France.
- Área de Ecología, Facultad de Ciencias, Universidad de Córdoba, Campus de Rabanales, Córdoba, Spain.
| | - Aurélien Estarague
- CEFE, Univ Montpellier, CNRS, EPHE, IRD, Montpellier, France
- LEPSE, Univ Montpellier, INRAE, Institut Agro Montpellier, Montpellier, France
| | - Denis Vile
- LEPSE, Univ Montpellier, INRAE, Institut Agro Montpellier, Montpellier, France
| | - Elza Gaignon
- CEFE, Univ Montpellier, CNRS, EPHE, IRD, Montpellier, France
| | - Cheng-Ruei Lee
- Institute of Ecology and Evolutionary Biology & Institute of Plant Biology, National Taiwan University, Taipei, Taiwan
| | | | - Cyrille Violle
- CEFE, Univ Montpellier, CNRS, EPHE, IRD, Montpellier, France
| | | |
Collapse
|
2
|
Williams-Simon PA, Oster C, Moaton JA, Ghidey R, Ng’oma E, Middleton KM, King EG. Naturally segregating genetic variants contribute to thermal tolerance in a Drosophila melanogaster model system. Genetics 2024; 227:iyae040. [PMID: 38506092 PMCID: PMC11075556 DOI: 10.1093/genetics/iyae040] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2023] [Revised: 07/11/2023] [Accepted: 02/26/2024] [Indexed: 03/21/2024] Open
Abstract
Thermal tolerance is a fundamental physiological complex trait for survival in many species. For example, everyday tasks such as foraging, finding a mate, and avoiding predation are highly dependent on how well an organism can tolerate extreme temperatures. Understanding the general architecture of the natural variants within the genes that control this trait is of high importance if we want to better comprehend thermal physiology. Here, we take a multipronged approach to further dissect the genetic architecture that controls thermal tolerance in natural populations using the Drosophila Synthetic Population Resource as a model system. First, we used quantitative genetics and Quantitative Trait Loci mapping to identify major effect regions within the genome that influences thermal tolerance, then integrated RNA-sequencing to identify differences in gene expression, and lastly, we used the RNAi system to (1) alter tissue-specific gene expression and (2) functionally validate our findings. This powerful integration of approaches not only allows for the identification of the genetic basis of thermal tolerance but also the physiology of thermal tolerance in a natural population, which ultimately elucidates thermal tolerance through a fitness-associated lens.
Collapse
Affiliation(s)
- Patricka A Williams-Simon
- Department of Biology, University of Pennsylvania, 433 S University Ave., 226 Leidy Laboratories, Philadelphia, PA 19104, USA
| | - Camille Oster
- Ash Creek Forest Management, 2796 SE 73rd Ave., Hillsboro, OR 97123, USA
| | | | - Ronel Ghidey
- ECHO Data Analysis Center, Johns Hopkins Bloomberg School of Public Health, 504 Cathedral St., Baltimore, MD 2120, USA
| | - Enoch Ng’oma
- Division of Biology, University of Missouri, 226 Tucker Hall, Columbia, MO 65211, USA
| | - Kevin M Middleton
- Division of Biology, University of Missouri, 222 Tucker Hall, Columbia, MO 65211, USA
| | - Elizabeth G King
- Division of Biology, University of Missouri, 401 Tucker Hall, Columbia, MO 65211, USA
| |
Collapse
|
3
|
Fanara JJ, Sassi PL, Goenaga J, Hasson E. Genetic basis and repeatability for desiccation resistance in Drosophila melanogaster (Diptera: Drosophilidae). Genetica 2024; 152:1-9. [PMID: 38102503 DOI: 10.1007/s10709-023-00201-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Accepted: 11/14/2023] [Indexed: 12/17/2023]
Abstract
Dehydration is a stress factor for organisms inhabiting natural habitats where water is scarce. Thus, it may be expected that species facing arid environments will develop mechanisms that maximize resistance to desiccation. Insects are excellent models for studying the effects of dehydration as well as the mechanisms and processes that prevent water loss since the effect of desiccation is greater due to the higher area/volume ratio than larger animals. Even though physiological and behavioral mechanisms to cope with desiccation are being understood, the genetic basis underlying the mechanisms related to variation in desiccation resistance and the context-dependent effect remain unsolved. Here we analyze the genetic bases of desiccation resistance in Drosophila melanogaster and identify candidate genes that underlie trait variation. Our quantitative genetic analysis of desiccation resistance revealed sexual dimorphism and extensive genetic variation. The phenotype-genotype association analyses (GWAS) identified 71 candidate genes responsible for total phenotypic variation in desiccation resistance. Half of these candidate genes were sex-specific suggesting that the genetic architecture underlying this adaptive trait differs between males and females. Moreover, the public availability of desiccation data analyzed on the same lines but in a different lab allows us to investigate the reliability and repeatability of results obtained in independent screens. Our survey indicates a pervasive micro-environment lab-dependent effect since we did not detect overlap in the sets of genes affecting desiccation resistance identified between labs.
Collapse
Affiliation(s)
- Juan Jose Fanara
- Laboratorio de Evolución, Departamento de Ecología Genética y Evolución, Instituto de Ecología Genética y Evolución de Buenos Aires (IEGEBA), CONICET-UBA, FCEN, Buenos Aires, Argentina.
| | - Paola Lorena Sassi
- Grupo de Ecología Integrativa de Fauna Silvestre, Instituto Argentino de Investigaciones de Zonas Áridas, CONICET, Facultad de Ciencias Exactas y Naturales, Universidad Nacional de Cuyo, Mendoza, Argentina
| | - Julieta Goenaga
- Quality Control & NIR Scientist, Biomar Group, Aarhus, Denmark
| | - Esteban Hasson
- Laboratorio de Evolución, Departamento de Ecología Genética y Evolución, Instituto de Ecología Genética y Evolución de Buenos Aires (IEGEBA), CONICET-UBA, FCEN, Buenos Aires, Argentina
| |
Collapse
|
4
|
Collet JM, Nidelet S, Fellous S. Genetic independence between traits separated by metamorphosis is widespread but varies with biological function. Proc Biol Sci 2023; 290:20231784. [PMID: 37935368 PMCID: PMC10645066 DOI: 10.1098/rspb.2023.1784] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Accepted: 10/06/2023] [Indexed: 11/09/2023] Open
Abstract
Why is metamorphosis so pervasive? Does it facilitate the independent (micro)evolution of quantitative traits in distinct life stages, similarly to how it enables some limbs and organs to develop at specific life stages? We tested this hypothesis by measuring the expression of 6400 genes in 41 Drosophila melanogaster inbred lines at larval and adult stages. Only 30% of the genes showed significant genetic correlations between larval and adult expression. By contrast, 46% of the traits showed some level of genetic independence between stages. Gene ontology terms enrichment revealed that across stages correlated traits were often involved in proteins synthesis, insecticide resistance and innate immunity, while a vast number of genes expression traits associated with energy metabolism were independent between life stages. We compared our results to a similar case: genetic constraints between males and females in gonochoric species (i.e. sexual antagonism). We expected selection for the separation between males and females to be higher than between juvenile and adult functions, as gonochorism is a more common strategy in the animal kingdom than metamorphosis. Surprisingly, we found that inter-stage constraints were lower than inter-sexual genetic constraints. Overall, our results show that metamorphosis enables a large part of the transcriptome to evolve independently at different life stages.
Collapse
Affiliation(s)
- Julie M. Collet
- CBGP, Univ Montpellier, CIRAD, INRAE, Institut Agro, IRD, Montpellier, France
| | - Sabine Nidelet
- CBGP, Univ Montpellier, CIRAD, INRAE, Institut Agro, IRD, Montpellier, France
| | - Simon Fellous
- CBGP, Univ Montpellier, CIRAD, INRAE, Institut Agro, IRD, Montpellier, France
| |
Collapse
|
5
|
Medina-Báez OA, Lenard A, Muzychuk RA, da Silva CRB, Diamond SE. Life cycle complexity and body mass drive erratic changes in climate vulnerability across ontogeny in a seasonally migrating butterfly. CONSERVATION PHYSIOLOGY 2023; 11:coad058. [PMID: 37547363 PMCID: PMC10401068 DOI: 10.1093/conphys/coad058] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/06/2022] [Revised: 06/26/2023] [Accepted: 07/19/2023] [Indexed: 08/08/2023]
Abstract
Physiological traits are often used for vulnerability assessments of organismal responses to climate change. Trait values can change dramatically over the life cycle of organisms but are typically assessed at a single developmental stage. Reconciling ontogenetic changes in physiological traits with vulnerability assessments often reveals early life-stage vulnerabilities. The degree to which ontogenetic changes in physiological traits are due to changes in body mass over development versus stage-specific responses determines the degree to which mass can be used as a proxy for vulnerability. Here, we use the painted lady butterfly, Vanessa cardui, to test ontogenetic changes in two physiological traits, the acute thermal sensitivity of routine metabolic rate (RMR Q10) and the critical thermal maximum (CTmax). RMR Q10 generally followed ontogenetic changes in body mass, with stages characterized by smaller body mass exhibiting lower acute thermal sensitivity. However, CTmax was largely decoupled from ontogenetic changes in body mass. In contrast with trends from other studies showing increasing vulnerability among progressively earlier developmental stages, our study revealed highly erratic patterns of vulnerability across ontogeny. Specifically, we found the lowest joint-trait vulnerability (both RMR Q10 and CTmax) in the earliest developmental stage we tested (3rd instar larvae), the highest vulnerabilities in the next two developmental stages (4th and 5th instar larvae), and reduced vulnerability into the pupal and adult stages. Our study supports growing evidence of mechanistic decoupling of physiology across developmental stages and suggests that body mass is not a universal proxy for all physiological trait indicators of climate vulnerability.
Collapse
Affiliation(s)
- Osmary A Medina-Báez
- Corresponding author: Department of Biology, Case Western Reserve University, Cleveland, OH 44106, USA. Tel: 1-216-368-0699.
| | - Angie Lenard
- Department of Biology, Case Western Reserve University, 2074 Adelbert Rd, Cleveland, OH 44106, USA
| | - Rut A Muzychuk
- Department of Biology, Case Western Reserve University, 2074 Adelbert Rd, Cleveland, OH 44106, USA
| | - Carmen R B da Silva
- Department of Biology, Case Western Reserve University, 2074 Adelbert Rd, Cleveland, OH 44106, USA
- School of Biological Sciences, Monash University, 25 Rainforest Walk, Clayton 3800, Australia
- College of Science and Engineering, Flinders University, Anchor Court, Bedford Park 5042, South Australia, Australia
| | - Sarah E. Diamond
- Department of Biology, Case Western Reserve University, 2074 Adelbert Rd, Cleveland, OH 44106, USA
| |
Collapse
|
6
|
Freda PJ, Toxopeus J, Dowle EJ, Ali ZM, Heter N, Collier RL, Sower I, Tucker JC, Morgan TJ, Ragland GJ. Transcriptomic and functional genetic evidence for distinct ecophysiological responses across complex life cycle stages. J Exp Biol 2022; 225:275641. [PMID: 35578907 DOI: 10.1242/jeb.244063] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/26/2022] [Accepted: 04/30/2022] [Indexed: 11/20/2022]
Abstract
Organisms with complex life cycles demonstrate a remarkable ability to change their phenotypes across development, presumably as an evolutionary adaptation to developmentally variable environments. Developmental variation in environmentally sensitive performance, and thermal sensitivity in particular, has been well documented in holometabolous insects. For example, thermal performance in adults and juvenile stages exhibit little genetic correlation (genetic decoupling) and can evolve independently, resulting in divergent thermal responses. Yet, we understand very little about how this genetic decoupling occurs. We tested the hypothesis that genetic decoupling of thermal physiology is driven by fundamental differences in physiology between life stages, despite a potentially conserved Cellular Stress Response. We used RNAseq to compare transcript expression in response to a cold stressor in Drosophila melanogaster larvae and adults and used RNAi (RNA interference) to test whether knocking down nine target genes differentially affected larval and adult cold tolerance. Transcriptomic responses of whole larvae and adults during and following exposure to -5°C were largely unique both in identity of responding transcripts and in temporal dynamics. Further, we analyzed the tissue-specificity of differentially-expressed transcripts from FlyAtlas 2 data, and concluded that stage-specific differences in transcription were not simply driven by differences in tissue composition. In addition, RNAi of target genes resulted in largely stage-specific and sometimes sex-specific effects on cold tolerance. The combined evidence suggests that thermal physiology is largely stage-specific at the level of gene expression, and thus natural selection may be acting on different loci during the independent thermal adaptation of different life stages.
Collapse
Affiliation(s)
- Philip J Freda
- Department of Entomology, Kansas State University, 1603 Old Claflin Place, Manhattan, KS 66506, USA
| | - Jantina Toxopeus
- Department of Integrative Biology, University of Colorado Denver, 1151 Arapahoe St., Denver, CO 80204, USA
| | - Edwina J Dowle
- Department of Integrative Biology, University of Colorado Denver, 1151 Arapahoe St., Denver, CO 80204, USA
| | - Zainab M Ali
- Division of Biology, Kansas State University, 116 Ackert Hall, Manhattan, KS 66506, USA
| | - Nicholas Heter
- Division of Biology, Kansas State University, 116 Ackert Hall, Manhattan, KS 66506, USA
| | - Rebekah L Collier
- Division of Biology, Kansas State University, 116 Ackert Hall, Manhattan, KS 66506, USA
| | - Isaiah Sower
- Department of Integrative Biology, University of Colorado Denver, 1151 Arapahoe St., Denver, CO 80204, USA
| | - Joseph C Tucker
- Department of Integrative Biology, University of Colorado Denver, 1151 Arapahoe St., Denver, CO 80204, USA
| | - Theodore J Morgan
- Division of Biology, Kansas State University, 116 Ackert Hall, Manhattan, KS 66506, USA
| | - Gregory J Ragland
- Department of Integrative Biology, University of Colorado Denver, 1151 Arapahoe St., Denver, CO 80204, USA
| |
Collapse
|
7
|
Lirakis M, Nolte V, Schlötterer C. Pool-GWAS on reproductive dormancy in Drosophila simulans suggests a polygenic architecture. G3 GENES|GENOMES|GENETICS 2022; 12:6523974. [PMID: 35137042 PMCID: PMC8895979 DOI: 10.1093/g3journal/jkac027] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/20/2021] [Accepted: 12/29/2021] [Indexed: 11/29/2022]
Abstract
The genetic basis of adaptation to different environments has been of long-standing interest to evolutionary biologists. Dormancy is a well-studied adaptation to facilitate overwintering. In Drosophila melanogaster, a moderate number of genes with large effects have been described, which suggests a simple genetic basis of dormancy. On the other hand, genome-wide scans for dormancy suggest a polygenic architecture in insects. In D. melanogaster, the analysis of the genetic architecture of dormancy is complicated by the presence of cosmopolitan inversions. Here, we performed a genome-wide scan to characterize the genetic basis of this ecologically extremely important trait in the sibling species of D. melanogaster, D. simulans that lacks cosmopolitan inversions. We performed Pool-GWAS in a South African D. simulans population for dormancy incidence at 2 temperature regimes (10 and 12°C, LD 10:14). We identified several genes with SNPs that showed a significant association with dormancy (P-value < 1e-13), but the overall modest response suggests that dormancy is a polygenic trait with many loci of small effect. Our results shed light on controversies on reproductive dormancy in Drosophila and have important implications for the characterization of the genetic basis of this trait.
Collapse
Affiliation(s)
- Manolis Lirakis
- Institut für Populationsgenetik, Vetmeduni Vienna, 1210 Wien, Austria
- Vienna Graduate School of Population Genetics, Vetmeduni Vienna, 1210 Wien, Austria
| | - Viola Nolte
- Institut für Populationsgenetik, Vetmeduni Vienna, 1210 Wien, Austria
| | | |
Collapse
|
8
|
Branch CL, Semenov GA, Wagner DN, Sonnenberg BR, Pitera AM, Bridge ES, Taylor SA, Pravosudov VV. The genetic basis of spatial cognitive variation in a food-caching bird. Curr Biol 2021; 32:210-219.e4. [PMID: 34735793 DOI: 10.1016/j.cub.2021.10.036] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2021] [Revised: 09/15/2021] [Accepted: 10/14/2021] [Indexed: 01/02/2023]
Abstract
Spatial cognition is used by most organisms to navigate their environment. Some species rely particularly heavily on specialized spatial cognition to survive, suggesting that a heritable component of cognition may be under natural selection. This idea remains largely untested outside of humans, perhaps because cognition in general is known to be strongly affected by learning and experience.1-4 We investigated the genetic basis of individual variation in spatial cognition used by non-migratory food-caching birds to recover food stores and survive harsh montane winters. Comparing the genomes of wild, free-living birds ranging from best to worst in their performance on a spatial cognitive task revealed significant associations with genes involved in neuron growth and development and hippocampal function. These results identify candidate genes associated with differences in spatial cognition and provide a critical link connecting individual variation in spatial cognition with natural selection.
Collapse
Affiliation(s)
- Carrie L Branch
- Cornell Lab of Ornithology, Cornell University, Ithaca, NY 14850, USA.
| | - Georgy A Semenov
- Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO 80309, USA
| | - Dominique N Wagner
- Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO 80309, USA
| | - Benjamin R Sonnenberg
- Ecology, Evolution, and Conservation Biology Graduate Program, University of Nevada, Reno, NV 89557, USA
| | - Angela M Pitera
- Ecology, Evolution, and Conservation Biology Graduate Program, University of Nevada, Reno, NV 89557, USA
| | - Eli S Bridge
- Ecology and Evolutionary Biology, University of Oklahoma, Norman, OK 73019, USA
| | - Scott A Taylor
- Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, CO 80309, USA
| | - Vladimir V Pravosudov
- Ecology, Evolution, and Conservation Biology Graduate Program, University of Nevada, Reno, NV 89557, USA.
| |
Collapse
|
9
|
Rebolledo AP, Sgrò CM, Monro K. Thermal Performance Curves Are Shaped by Prior Thermal Environment in Early Life. Front Physiol 2021; 12:738338. [PMID: 34744779 PMCID: PMC8564010 DOI: 10.3389/fphys.2021.738338] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2021] [Accepted: 09/21/2021] [Indexed: 01/31/2023] Open
Abstract
Understanding links between thermal performance and environmental variation is necessary to predict organismal responses to climate change, and remains an ongoing challenge for ectotherms with complex life cycles. Distinct life stages can differ in thermal sensitivity, experience different environmental conditions as development unfolds, and, because stages are by nature interdependent, environmental effects can carry over from one stage to affect performance at others. Thermal performance may therefore respond to carryover effects of prior thermal environments, yet detailed insights into the nature, strength, and direction of those responses are still lacking. Here, in an aquatic ectotherm whose early planktonic stages (gametes, embryos, and larvae) govern adult abundances and dynamics, we explore the effects of prior thermal environments at fertilization and embryogenesis on thermal performance curves at the end of planktonic development. We factorially manipulate temperatures at fertilization and embryogenesis, then, for each combination of prior temperatures, measure thermal performance curves for survival of planktonic development (end of the larval stage) throughout the performance range. By combining generalized linear mixed modeling with parametric bootstrapping, we formally estimate and compare curve descriptors (thermal optima, limits, and breadth) among prior environments, and reveal carryover effects of temperature at embryogenesis, but not fertilization, on thermal optima at completion of development. Specifically, thermal optima shifted to track temperature during embryogenesis, while thermal limits and breadth remained unchanged. Our results argue that key aspects of thermal performance are shaped by prior thermal environment in early life, warranting further investigation of the possible mechanisms underpinning that response, and closer consideration of thermal carryover effects when predicting organismal responses to climate change.
Collapse
|
10
|
St Leger RJ. Insects and their pathogens in a changing climate. J Invertebr Pathol 2021; 184:107644. [PMID: 34237297 DOI: 10.1016/j.jip.2021.107644] [Citation(s) in RCA: 13] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/15/2020] [Revised: 01/02/2021] [Accepted: 06/28/2021] [Indexed: 11/19/2022]
Abstract
The complex nature of climate change-mediated multitrophic interaction is an underexplored area, but has the potential to dramatically shift transmission and distribution of many insects and their pathogens, placing some populations closer to the brink of extinction. However, for individual insect-pathogen interactions climate change will have complicated hard-to-anticipate impacts. Thus, both pathogen virulence and insect host immunity are intrinsically linked with generalized stress responses, and in both pathogen and host have extensive trade-offs with nutrition (e.g., host plant quality), growth and reproduction. Potentially alleviating or exasperating these impacts, some pathogens and hosts respond genetically and rapidly to environmental shifts. This review identifies many areas for future research including a particular need to identify how altered global warming interacts with other environmental changes and stressors, and how consistent these impacts are across pathogens and hosts. With that achieved we would be closer to producing an overarching framework to integrate knowledge on all environmental interplay and infectious disease events.
Collapse
Affiliation(s)
- Raymond J St Leger
- Department of Entomology, University of Maryland, College Park, MD 20742, USA.
| |
Collapse
|
11
|
Herrig DK, Vertacnik KL, Kohrs AR, Linnen CR. Support for the adaptive decoupling hypothesis from whole-transcriptome profiles of a hypermetamorphic and sexually dimorphic insect, Neodiprion lecontei. Mol Ecol 2021; 30:4551-4566. [PMID: 34174126 DOI: 10.1111/mec.16041] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2020] [Revised: 06/10/2021] [Accepted: 06/11/2021] [Indexed: 12/31/2022]
Abstract
Though seemingly bizarre, the dramatic morphological and ecological transformation that occurs when immature life stages metamorphose into reproductive adults is one of the most successful developmental strategies on the planet. The adaptive decoupling hypothesis (ADH) proposes that metamorphosis is an adaptation for breaking developmental links between traits expressed in different life stages, thereby facilitating their independent evolution when exposed to opposing selection pressures. Here, we draw inspiration from the ADH to develop a conceptual framework for understanding changes in gene expression across ontogeny. We hypothesized that patterns of stage-biased and sex-biased gene expression are the product of both decoupling mechanisms and selection history. To test this hypothesis, we characterized transcriptome-wide patterns of gene-expression traits for three ecologically distinct larval stages (all male) and adult males and females of a hypermetamorphic insect (Neodiprion lecontei). We found that stage-biased gene expression was most pronounced between larval and adult males, which is consistent with the ADH. However, even in the absence of a metamorphic transition, considerable stage-biased expression was observed among morphologically and behaviourally distinct larval stages. Stage-biased expression was also observed across ecologically relevant Gene Ontology categories and genes, highlighting the role of ecology in shaping patterns of gene expression. We also found that the magnitude and prevalence of stage-biased expression far exceeded adult sex-biased expression. Overall, our results highlight how the ADH can shed light on transcriptome-wide patterns of gene expression in organisms with complex life cycles. For maximal insight, detailed knowledge of organismal ecology is also essential.
Collapse
Affiliation(s)
- Danielle K Herrig
- Department of Biology, University of Kentucky, Lexington, Kentucky, USA
| | - Kim L Vertacnik
- Department of Biology, University of Kentucky, Lexington, Kentucky, USA
| | - Anna R Kohrs
- Department of Biology, University of Kentucky, Lexington, Kentucky, USA
| | | |
Collapse
|
12
|
Srygley RB. Elevational and Latitudinal Changes in Cold Tolerance of Nymph and Adult Mormon Crickets Anabrus simplex (Orthoptera: Tettigoniidae). ENVIRONMENTAL ENTOMOLOGY 2021; 50:699-705. [PMID: 33590871 DOI: 10.1093/ee/nvab009] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2020] [Indexed: 06/12/2023]
Abstract
Insects that hatch in winter and early spring in desert and montane regions are likely to encounter extreme weather events, including precipitous drops in temperature. The susceptibility of insects to exposure to subzero temperatures is predicted to decrease with increasing latitude or elevation. Mormon crickets occur over a broad latitudinal range from southwestern United States to Canada and a broad elevational range from near sea-level to 3,000 m. Population declines have been attributed to late freezing events, but winter hatching suggests they may also be cold tolerant. Lower lethal temperature of high elevation populations in low latitude Arizona (AZ) and high latitude Wyoming (WY) was measured by exposing nymphs and adults to 6 h or 24 h of subzero temperature. From similar latitude, WY was compared with mid-elevation Idaho (ID) and low elevation Oregon (OR) populations. Contrary to the prediction, lethal temperature of third instar nymphs was lower in AZ than in the more northerly populations. Consistently, AZ was more tolerant of cold in early nymphal instars relative to populations from higher latitude. Early hatching at lower latitudes might increase the risk of early instars experiencing a severe cold snap relative to nymphs at high latitudes. Also, contrary to prediction, the lethal temperature of adults increased with elevation, whereas third instar nymphs from mid-elevation ID were the most susceptible to cold exposure. Cold tolerance in immature and mature stages is more likely to be uncoupled when life stages do not coincide, as with Mormon crickets.
Collapse
Affiliation(s)
- Robert B Srygley
- Pest Management Research Unit, Northern Plains Agricultural Research Laboratory, USDA-Agricultural Research Service, Sidney, MT, USA
| |
Collapse
|
13
|
Butterson S, Roe AD, Marshall KE. Plasticity of cold hardiness in the eastern spruce budworm, Choristoneura fumiferana. Comp Biochem Physiol A Mol Integr Physiol 2021; 259:110998. [PMID: 34082110 DOI: 10.1016/j.cbpa.2021.110998] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/02/2021] [Revised: 05/28/2021] [Accepted: 05/29/2021] [Indexed: 11/18/2022]
Abstract
High latitude insect populations must cope with extreme conditions, particularly low temperatures. Insects use a variety of cold hardiness mechanisms to withstand this temperature stress, and these can drive geographic distributions through overwintering mortality. The degree of cold hardiness can be altered by two evolved responses: phenotypic plasticity and local adaptation. Phenotypic plasticity can occur within or between generations (transgenerational plasticity; TGP), and local adaptation can evolve through directional selection in response to regional climatic differences. We used the eastern spruce budworm, Choristoneura fumiferana (Lepidoptera: Tortricidae) as a model to explore the role that variable winter temperatures play in inducing two aspects of plasticity in cold hardiness: TGP and local adaptation in phenotypic plasticity. This species is one of the most destructive boreal forest pests in North America, therefore accurately predicting overwintering survival is essential for effective management. While we found no evidence of TGP in cold hardiness, there was a long term fitness cost to larvae that experienced repeated cold exposures. We also found evidence of local adaptation in both seasonal and short-term plasticity of cold hardiness, as our more northerly populations that would experience lower overwintering temperatures had more plastic responses to cold exposure. These findings provide evidence for the importance of phenotypic plasticity and local adaptation when modelling species distributions.
Collapse
Affiliation(s)
- Skye Butterson
- Department of Zoology, University of British Columbia, Vancouver, BC V6T 1Z4, Canada
| | - Amanda D Roe
- Natural Resources Canada, Canadian Forest Service, Great Lakes Forestry Centre, Sault Ste. Marie, ON P6A 2E5, Canada.
| | - Katie E Marshall
- Department of Zoology, University of British Columbia, Vancouver, BC V6T 1Z4, Canada.
| |
Collapse
|
14
|
Everman ER, Cloud-Richardson KM, Macdonald SJ. Characterizing the genetic basis of copper toxicity in Drosophila reveals a complex pattern of allelic, regulatory, and behavioral variation. Genetics 2021; 217:1-20. [PMID: 33683361 PMCID: PMC8045719 DOI: 10.1093/genetics/iyaa020] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2020] [Accepted: 11/16/2020] [Indexed: 11/13/2022] Open
Abstract
A range of heavy metals are required for normal cell function and homeostasis. However, the anthropogenic release of metal compounds into soil and water sources presents a pervasive health threat. Copper is one of many heavy metals that negatively impacts diverse organisms at a global scale. Using a combination of quantitative trait locus (QTL) mapping and RNA sequencing in the Drosophila Synthetic Population Resource, we demonstrate that resistance to the toxic effects of ingested copper in D. melanogaster is genetically complex and influenced by allelic and expression variation at multiple loci. QTL mapping identified several QTL that account for a substantial fraction of heritability. Additionally, we find that copper resistance is impacted by variation in behavioral avoidance of copper and may be subject to life-stage specific regulation. Gene expression analysis further demonstrated that resistant and sensitive strains are characterized by unique expression patterns. Several of the candidate genes identified via QTL mapping and RNAseq have known copper-specific functions (e.g., Ccs, Sod3, CG11825), and others are involved in the regulation of other heavy metals (e.g., Catsup, whd). We validated several of these candidate genes with RNAi suggesting they contribute to variation in adult copper resistance. Our study illuminates the interconnected roles that allelic and expression variation, organism life stage, and behavior play in copper resistance, allowing a deeper understanding of the diverse mechanisms through which metal pollution can negatively impact organisms.
Collapse
Affiliation(s)
- Elizabeth R Everman
- Department of Molecular Biosciences, University of Kansas, Lawrence, KS 66045, USA
| | | | - Stuart J Macdonald
- Department of Molecular Biosciences, University of Kansas, Lawrence, KS 66045, USA
- Center for Computational Biology, University of Kansas, Lawrence, KS 66047, USA
| |
Collapse
|
15
|
Marshall KE, Gotthard K, Williams CM. Evolutionary impacts of winter climate change on insects. CURRENT OPINION IN INSECT SCIENCE 2020; 41:54-62. [PMID: 32711362 DOI: 10.1016/j.cois.2020.06.003] [Citation(s) in RCA: 51] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/10/2020] [Revised: 05/29/2020] [Accepted: 06/08/2020] [Indexed: 06/11/2023]
Abstract
Overwintering is a serious challenge for insects, and winters are rapidly changing as climate shifts. The capacity for phenotypic plasticity and evolutionary adaptation will determine which species profit or suffer from these changes. Here we discuss current knowledge on the potential and evidence for evolution in winter-relevant traits among insect species and populations. We conclude that the best evidence for evolutionary shifts in response to changing winters remain those related to changes in phenology, but all evidence points to cold hardiness as also having the potential to evolve in response to climate change. Predicting future population sizes and ranges relies on understanding to what extent evolution in winter-related traits is possible, and remains a serious challenge.
Collapse
Affiliation(s)
| | - Karl Gotthard
- Department of Zoology, Stockholm University, Stockholm SE-106 91, Sweden
| | | |
Collapse
|
16
|
Kingsolver JG, Buckley LB. Ontogenetic variation in thermal sensitivity shapes insect ecological responses to climate change. CURRENT OPINION IN INSECT SCIENCE 2020; 41:17-24. [PMID: 32599547 DOI: 10.1016/j.cois.2020.05.005] [Citation(s) in RCA: 39] [Impact Index Per Article: 9.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2020] [Revised: 05/06/2020] [Accepted: 05/12/2020] [Indexed: 06/11/2023]
Abstract
Insects have distinct life stages that can differ in their responses to environmental factors. We discuss empirical evidence and theoretical models for ontogenetic variation in thermal sensitivity and performance curves (TPCs). Data on lower thermal limits for development (T0) demonstrate variation between stages within a species that is of comparable magnitude to variation among species; we illustrate the consequences of such ontogenetic variation for developmental responses to changing temperature. Ontogenetic variation in optimal temperatures and upper thermal limits has been reported in some systems, but current data are too limited to identify general patterns. The shapes of TPCs for different fitness components such as juvenile survival, adult fecundity, and generation time differ in characteristic ways, with important consequences for understanding fitness in varying thermal environments. We highlight a theoretical framework for incorporating ontogenetic variation into process-based models of population responses to seasonal variation and climate change.
Collapse
Affiliation(s)
- Joel G Kingsolver
- Department of Biology, University of North Carolina, Chapel Hill, NC 27599, United States.
| | - Lauren B Buckley
- Department of Biology, University of Washington, Seattle, WA 98195, United States
| |
Collapse
|
17
|
Rejection of the beneficial acclimation hypothesis (BAH) for short term heat acclimation in Drosophila nepalensis. Genetica 2020; 148:173-182. [PMID: 32789784 DOI: 10.1007/s10709-020-00100-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2020] [Accepted: 08/08/2020] [Indexed: 10/23/2022]
Abstract
Beneficial acclimation hypothesis (BAH) is the phenotypic plasticity in response to changing environments which enables organisms to enhance their fitness. In recent years, however, BAH has received vigorous criticism and is still debatable. In this study, we tested thermal hardiness phenotypes (melanization, chill coma recovery, heat knockdown and percentage survival) on adult and pre-adult stages of Drosophila nepalensis, reared in different thermal environments (14, 17, 21 and 25 °C) to check whether increasing natural surrounding temperature and acclimation limit towards environmental change is detrimental or beneficial. Results showed that rearing D. nepalensis at higher temperatures (21 and 25 °C) reduces its melanization and cold hardiness but improves heat knockdown times. When temperature was raised to 26.2 °C (0.6 °C above the upper thermal maxima), to determine the short-term acclimation effects, survival and fitness of adults diminished approximately 1.5 to 2 folds. These results suggest that D. nepalensis has long-term developmental acclimation to both heat and cold which would be extremely beneficial as temperatures and climates alter in the region due to global warming. However, a lack of short-term heat acclimation suggests that rapid shifts in thermal extreme could be detrimental to D. nepalensis.
Collapse
|
18
|
Lecheta MC, Awde DN, O’Leary TS, Unfried LN, Jacobs NA, Whitlock MH, McCabe E, Powers B, Bora K, Waters JS, Axen HJ, Frietze S, Lockwood BL, Teets NM, Cahan SH. Integrating GWAS and Transcriptomics to Identify the Molecular Underpinnings of Thermal Stress Responses in Drosophila melanogaster. Front Genet 2020; 11:658. [PMID: 32655626 PMCID: PMC7324644 DOI: 10.3389/fgene.2020.00658] [Citation(s) in RCA: 19] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/06/2020] [Accepted: 05/29/2020] [Indexed: 12/12/2022] Open
Abstract
Thermal tolerance of an organism depends on both the ability to dynamically adjust to a thermal stress and preparatory developmental processes that enhance thermal resistance. However, the extent to which standing genetic variation in thermal tolerance alleles influence dynamic stress responses vs. preparatory processes is unknown. Here, using the model species Drosophila melanogaster, we used a combination of Genome Wide Association mapping (GWAS) and transcriptomic profiling to characterize whether genes associated with thermal tolerance are primarily involved in dynamic stress responses or preparatory processes that influence physiological condition at the time of thermal stress. To test our hypotheses, we measured the critical thermal minimum (CTmin) and critical thermal maximum (CTmax) of 100 lines of the Drosophila Genetic Reference Panel (DGRP) and used GWAS to identify loci that explain variation in thermal limits. We observed greater variation in lower thermal limits, with CTmin ranging from 1.81 to 8.60°C, while CTmax ranged from 38.74 to 40.64°C. We identified 151 and 99 distinct genes associated with CTmin and CTmax, respectively, and there was strong support that these genes are involved in both dynamic responses to thermal stress and preparatory processes that increase thermal resistance. Many of the genes identified by GWAS were involved in the direct transcriptional response to thermal stress (72/151 for cold; 59/99 for heat), and overall GWAS candidates were more likely to be differentially expressed than other genes. Further, several GWAS candidates were regulatory genes that may participate in the regulation of stress responses, and gene ontologies related to development and morphogenesis were enriched, suggesting many of these genes influence thermal tolerance through effects on development and physiological status. Overall, our results suggest that thermal tolerance alleles can influence both dynamic plastic responses to thermal stress and preparatory processes that improve thermal resistance. These results also have utility for directly comparing GWAS and transcriptomic approaches for identifying candidate genes associated with thermal tolerance.
Collapse
Affiliation(s)
- Melise C. Lecheta
- Department of Entomology, University of Kentucky, Lexington, KY, United States
| | - David N. Awde
- Department of Entomology, University of Kentucky, Lexington, KY, United States
| | - Thomas S. O’Leary
- Department of Biology, University of Vermont, Burlington, VT, United States
| | - Laura N. Unfried
- Department of Entomology, University of Kentucky, Lexington, KY, United States
| | - Nicholas A. Jacobs
- Department of Entomology, University of Kentucky, Lexington, KY, United States
| | - Miles H. Whitlock
- Department of Entomology, University of Kentucky, Lexington, KY, United States
| | - Eleanor McCabe
- Department of Entomology, University of Kentucky, Lexington, KY, United States
| | - Beck Powers
- Department of Biology, University of Vermont, Burlington, VT, United States
| | - Katie Bora
- Department of Biology, University of Vermont, Burlington, VT, United States
| | - James S. Waters
- Department of Biology, Providence College, Providence, RI, United States
| | - Heather J. Axen
- Department of Biology and Biomedical Sciences, Salve Regina College, Providence, RI, United States
| | - Seth Frietze
- Department of Biomedical and Health Sciences, University of Vermont, Burlington, VT, United States
| | - Brent L. Lockwood
- Department of Biology, University of Vermont, Burlington, VT, United States
| | - Nicholas M. Teets
- Department of Entomology, University of Kentucky, Lexington, KY, United States
| | - Sara H. Cahan
- Department of Biology, University of Vermont, Burlington, VT, United States
| |
Collapse
|
19
|
Garcia MJ, Littler AS, Sriram A, Teets NM. Distinct cold tolerance traits independently vary across genotypes in Drosophila melanogaster. Evolution 2020; 74:1437-1450. [PMID: 32463118 DOI: 10.1111/evo.14025] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2019] [Accepted: 05/25/2020] [Indexed: 12/27/2022]
Abstract
Cold tolerance, the ability to cope with low temperature stress, is a critical adaptation in thermally variable environments. An individual's cold tolerance comprises several traits including minimum temperatures for growth and activity, ability to survive severe cold, and ability to resume normal function after cold subsides. Across species, these traits are correlated, suggesting they were shaped by shared evolutionary processes or possibly share physiological mechanisms. However, the extent to which cold tolerance traits and their associated mechanisms covary within populations has not been assessed. We measured five cold tolerance traits-critical thermal minimum, chill coma recovery, short- and long-term cold tolerance, and cold-induced changes in locomotor behavior-along with cold-induced expression of two genes with possible roles in cold tolerance (heat shock protein 70 and frost)-across 12 lines of Drosophila melanogaster derived from a single population. We observed significant genetic variation in all traits, but few were correlated across genotypes, and these correlations were sex-specific. Further, cold-induced gene expression varied by genotype, but there was no evidence supporting our hypothesis that cold-hardy lines would have either higher baseline expression or induction of stress genes. These results suggest cold tolerance traits possess unique mechanisms and have the capacity to evolve independently.
Collapse
Affiliation(s)
- Mark J Garcia
- Department of Entomology, College of Agriculture, Food, and Environment, University of Kentucky, Lexington, Kentucky, 40546
| | - Aerianna S Littler
- Department of Entomology, College of Agriculture, Food, and Environment, University of Kentucky, Lexington, Kentucky, 40546
| | - Aditya Sriram
- Department of Entomology, College of Agriculture, Food, and Environment, University of Kentucky, Lexington, Kentucky, 40546
| | - Nicholas M Teets
- Department of Entomology, College of Agriculture, Food, and Environment, University of Kentucky, Lexington, Kentucky, 40546
| |
Collapse
|
20
|
Collet J, Fellous S. Do traits separated by metamorphosis evolve independently? Concepts and methods. Proc Biol Sci 2020; 286:20190445. [PMID: 30966980 DOI: 10.1098/rspb.2019.0445] [Citation(s) in RCA: 18] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022] Open
Abstract
Despite the ubiquity of complex life cycles, we know little of the evolutionary constraints exerted by metamorphosis. Here, we present pitfalls and methods to answer whether animals with a complex life cycle can independently adapt to the environments encountered at each life stage, with a specific focus on the microevolution of quantitative characters. We first discuss challenges associated with study traits and populations. We further emphasize the benefits of using a combination of approaches. We then develop how multivariate methods can limit several issues by revealing genetic patterns that are invisible when only considering trait-by-trait genetic correlations. Finally, we detail how Lande's work on sexual dimorphism can be applied in measuring G matrices across life stages. The methods and tools described here will contribute towards building a predictive framework for trait evolution across life stages.
Collapse
Affiliation(s)
- Julie Collet
- 1 CBGP, INRA, CIRAD, IRD, Montpellier SupAgro, Univ. Montpellier , Montpellier , France.,2 CEFE, CNRS, Univ. Montpellier, Univ. Paul Valéry Montpellier 3, EPHE, IRD , Montpellier , France
| | - Simon Fellous
- 1 CBGP, INRA, CIRAD, IRD, Montpellier SupAgro, Univ. Montpellier , Montpellier , France
| |
Collapse
|
21
|
Stage-specific genotype-by-environment interactions for cold and heat hardiness in Drosophila melanogaster. Heredity (Edinb) 2019; 123:479-491. [PMID: 31164731 DOI: 10.1038/s41437-019-0236-9] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2018] [Revised: 04/29/2019] [Accepted: 05/05/2019] [Indexed: 12/18/2022] Open
Abstract
Environments often vary across a life cycle, imposing fluctuating natural selection across development. Such fluctuating selection can favor different phenotypes in different life stages, but stage-specific evolutionary responses will depend on genetic variance, covariance, and their interaction across development and across environments. Thus, quantifying how genetic architecture varies with plastic responses to the environment and across development is vital to predict whether stage-specific adaptation will occur in nature. Additionally, the interaction of genetic variation and environmental plasticity (GxE) may be stage-specific, leading to a three-way interaction between genotype, environment, and development or GxDxE. To test for these patterns, we exposed larvae and adults of Drosophila melanogaster isogenic lines derived from a natural population to extreme heat and cold stress after developmental acclimation to cool (18 °C) and warm (25 °C) conditions and measured genetic variance for thermal hardiness. We detected significant GxE that was specific to larvae and adults for cold and heat hardiness (GxDxE), but no significant genetic correlation across development for either trait at either acclimation temperature. However, cross-development phenotypic correlations for acclimation responses suggest that plasticity itself may be developmentally constrained, though rigorously testing this hypothesis requires more experimentation. These results illustrate the potential for stage-specific adaptation within a complex life cycle and demonstrate the importance of measuring traits at appropriate developmental stages and environmental conditions when predicting evolutionary responses to changing climates.
Collapse
|
22
|
Angilletta MJ, Youngblood JP, Neel LK, VandenBrooks JM. The neuroscience of adaptive thermoregulation. Neurosci Lett 2019; 692:127-136. [DOI: 10.1016/j.neulet.2018.10.046] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2018] [Revised: 10/17/2018] [Accepted: 10/21/2018] [Indexed: 01/05/2023]
|
23
|
Williams CM, Ragland GJ, Betini G, Buckley LB, Cheviron ZA, Donohue K, Hereford J, Humphries MM, Lisovski S, Marshall KE, Schmidt PS, Sheldon KS, Varpe Ø, Visser ME. Understanding Evolutionary Impacts of Seasonality: An Introduction to the Symposium. Integr Comp Biol 2018; 57:921-933. [PMID: 29045649 DOI: 10.1093/icb/icx122] [Citation(s) in RCA: 52] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
Abstract
Seasonality is a critically important aspect of environmental variability, and strongly shapes all aspects of life for organisms living in highly seasonal environments. Seasonality has played a key role in generating biodiversity, and has driven the evolution of extreme physiological adaptations and behaviors such as migration and hibernation. Fluctuating selection pressures on survival and fecundity between summer and winter provide a complex selective landscape, which can be met by a combination of three outcomes of adaptive evolution: genetic polymorphism, phenotypic plasticity, and bet-hedging. Here, we have identified four important research questions with the goal of advancing our understanding of evolutionary impacts of seasonality. First, we ask how characteristics of environments and species will determine which adaptive response occurs. Relevant characteristics include costs and limits of plasticity, predictability, and reliability of cues, and grain of environmental variation relative to generation time. A second important question is how phenological shifts will amplify or ameliorate selection on physiological hardiness. Shifts in phenology can preserve the thermal niche despite shifts in climate, but may fail to completely conserve the niche or may even expose life stages to conditions that cause mortality. Considering distinct environmental sensitivities of life history stages will be key to refining models that forecast susceptibility to climate change. Third, we must identify critical physiological phenotypes that underlie seasonal adaptation and work toward understanding the genetic architectures of these responses. These architectures are key for predicting evolutionary responses. Pleiotropic genes that regulate multiple responses to changing seasons may facilitate coordination among functionally related traits, or conversely may constrain the expression of optimal phenotypes. Finally, we must advance our understanding of how changes in seasonal fluctuations are impacting ecological interaction networks. We should move beyond simple dyadic interactions, such as predator prey dynamics, and understand how these interactions scale up to affect ecological interaction networks. As global climate change alters many aspects of seasonal variability, including extreme events and changes in mean conditions, organisms must respond appropriately or go extinct. The outcome of adaptation to seasonality will determine responses to climate change.
Collapse
Affiliation(s)
- Caroline M Williams
- Department of Integrative Biology, University of California, 3040 Valley Life Sciences Building, Berkeley, CA 94705, USA
| | - Gregory J Ragland
- Department of Integrative Biology, University of Colorado, Denver, CO, USA
| | - Gustavo Betini
- Department of Integrative Biology, University of Guelph, Guelph, Ontario, Canada
| | - Lauren B Buckley
- Department of Biology, University of Washington, Seattle, WA, USA
| | - Zachary A Cheviron
- Division of Biological Sciences, University of Montana, Missoula, MT, USA
| | | | - Joe Hereford
- Department of Ecology and Evolution, University of California, Davis, CA, USA
| | - Murray M Humphries
- Department of Natural Resource Sciences, McGill University, Quebec, Canada
| | - Simeon Lisovski
- Department of Neurobiology, Physiology and Behavior, University of California, Davis, CA, USA
| | | | - Paul S Schmidt
- Department of Biology, University of Pennsylvania, Philadelphia, PA, USA
| | - Kimberly S Sheldon
- Department of Ecology and Evolutionary Biology, University of Tennessee, Knoxville, TN, USA
| | - Øystein Varpe
- Department of Arctic Biology, The University Centre in Svalbard, Longyearbyen, Norway.,Akvaplan-niva, Fram Centre, Tromsø, Norway
| | - Marcel E Visser
- Department of Animal Ecology, Netherlands Institute of Ecology (NIOO-KNAW), P.O. Box 50, 6700 AB Wageningen, The Netherlands
| |
Collapse
|