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Miryeganeh M, Armitage DW. Epigenetic responses of trees to environmental stress in the context of climate change. Biol Rev Camb Philos Soc 2024. [PMID: 39192567 DOI: 10.1111/brv.13132] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Revised: 08/13/2024] [Accepted: 08/14/2024] [Indexed: 08/29/2024]
Abstract
In long-lived tree populations, when environmental change outpaces rates of evolutionary adaptation, plasticity in traits related to stress tolerance, dormancy, and dispersal may be vital for preventing extinction. While a population's genetic background partly determines its ability to adapt to a changing environment, so too do the many types of epigenetic modifications that occur within and among populations, which vary on timescales orders of magnitude faster than the emergence of new beneficial alleles. Consequently, phenotypic plasticity driven by epigenetic modification may be especially critical for sessile, long-lived organisms such as trees that must rely on this plasticity to keep pace with rapid anthropogenic environmental change. While studies have reported large effects of DNA methylation, histone modification, and non-coding RNAs on the expression of stress-tolerance genes and resulting phenotypic responses, little is known about the role of these effects in non-model plants and particularly in trees. Here, we review new findings in plant epigenetics with particular relevance to the ability of trees to adapt to or escape stressors associated with rapid climate change. Such findings include specific epigenetic influences over drought, heat, and salinity tolerance, as well as dormancy and dispersal traits. We also highlight promising findings concerning transgenerational inheritance of an epigenetic 'stress memory' in plants. As epigenetic information is becoming increasingly easy to obtain, we close by outlining ways in which ecologists can use epigenetic information better to inform population management and forecasting efforts. Understanding the molecular mechanisms behind phenotypic plasticity and stress memory in tree species offers a promising path towards a mechanistic understanding of trees' responses to climate change.
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Affiliation(s)
- Matin Miryeganeh
- Integrative Community Ecology Unit, Okinawa Institute of Science and Technology Graduate University, Onna-son, Okinawa, 904-0495, Japan
| | - David W Armitage
- Integrative Community Ecology Unit, Okinawa Institute of Science and Technology Graduate University, Onna-son, Okinawa, 904-0495, Japan
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2
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Blonder BW. Why are triploid quaking aspen (Populus tremuloides) common? AMERICAN JOURNAL OF BOTANY 2024; 111:e16325. [PMID: 38704729 DOI: 10.1002/ajb2.16325] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/27/2023] [Revised: 04/06/2024] [Accepted: 04/07/2024] [Indexed: 05/07/2024]
Abstract
PREMISE Quaking aspen is a clonal tree species that has mixed ploidy, often with high relative abundance of both diploids and triploids but no haploids or tetraploids. Triploids typically have low fertility, leaving their occurrence apparently unlikely from an evolutionary perspective, unless they provide a "triploid bridge" to generating higher-fitness tetraploids-which are not observed in this species. This study focused on how triploidy can be maintained in quaking aspen. METHODS A computational model was used to simulate gamete production, sexual reproduction, asexual reproduction, parent survival, and offspring survival in a population. All parameters were assumed to be cytotype-dependent and environment-independent. Sampling methods were used to identify parameter combinations consistent with observed cytotype frequencies. RESULTS Many processes and parameter values were sufficient to yield a moderate frequency of triploids, and very few were necessary. The most plausible route involved higher triploid survival at the parent or offspring stage and limited unreduced gamete production by either diploid or triploid parents. Triploid fertility was helpful but not necessary. CONCLUSIONS The coexistence of diploids and triploids in quaking aspen is statistically likely and promoted by the existence of commonly observed, long-lived triploid clones. However, other mechanisms not captured by the model related to environmental variation could also occur. Further empirical data or more complex but difficult-to-parameterize models are needed to gain further insight.
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Affiliation(s)
- Benjamin Wong Blonder
- Department of Environmental Science, Policy, and Management, University of California at Berkeley, Berkeley, 94720 USA, CA
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Misiukevičius E, Mažeikienė I, Stanys V. Ploidy's Role in Daylily Plant Resilience to Drought Stress Challenges. BIOLOGY 2024; 13:289. [PMID: 38785771 PMCID: PMC11117801 DOI: 10.3390/biology13050289] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2024] [Revised: 04/15/2024] [Accepted: 04/23/2024] [Indexed: 05/25/2024]
Abstract
This study aimed to understand the differences in the performance of diploid and tetraploid daylily cultivars under water deficit conditions, which are essential indicators of drought tolerance. This research revealed that tetraploid daylilies performed better than diploid varieties in arid conditions due to their enhanced adaptability and resilience to water deficit conditions. The analysis of the results highlighted the need to clarify the specific physiological and molecular mechanisms underlying the enhanced drought tolerance observed in tetraploid plants compared to diploids. This research offers valuable knowledge for improving crop resilience and sustainable floricultural practices in changing environmental conditions. The morphological and physiological parameters were analyzed in 19 diploid and 21 tetraploid daylily cultivars under controlled water deficit conditions, and three drought resistance groups were formed based on the clustering of these parameters. In a high drought resistance cluster, 93.3% tetraploid cultivars were exhibited. This study demonstrates the significance of ploidy in shaping plant responses to drought stress. It emphasizes the importance of studying plant responses to water deficit in landscape horticulture to develop drought-tolerant plants and ensure aspects of climate change.
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Affiliation(s)
- Edvinas Misiukevičius
- Lithuanian Research Centre for Agriculture and Forestry, Institute of Horticulture, Kaunas Street 30, 54333 Babtai, Lithuania; (I.M.); (V.S.)
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López-Jurado J, Picazo-Aragonés J, Alonso C, Balao F, Mateos-Naranjo E. Physiology, gene expression, and epiphenotype of two Dianthus broteri polyploid cytotypes under temperature stress. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:1601-1614. [PMID: 37988617 PMCID: PMC10901207 DOI: 10.1093/jxb/erad462] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/29/2022] [Accepted: 11/21/2023] [Indexed: 11/23/2023]
Abstract
Increasing evidence supports a major role for abiotic stress response in the success of plant polyploids, which usually thrive in harsh environments. However, understanding the ecophysiology of polyploids is challenging due to interactions between genome doubling and natural selection. Here, we investigated physiological responses, gene expression, and the epiphenotype of two related Dianthus broteri cytotypes-with different genome duplications (4× and 12×) and evolutionary trajectories-to short extreme temperature events (42/28 °C and 9/5 °C). The 12× cytotype showed higher expression of stress-responsive genes (SWEET1, PP2C16, AI5L3, and ATHB7) and enhanced gas exchange compared with 4×. Under heat stress, both ploidies had greatly impaired physiological performance and altered gene expression, with reduced cytosine methylation. However, the 12× cytotype exhibited remarkable physiological tolerance (maintaining gas exchange and water status via greater photochemical integrity and probably enhanced water storage) while down-regulating PP2C16 expression. Conversely, 4× D. broteri was susceptible to thermal stress despite prioritizing water conservation, showing signs of non-stomatal photosynthetic limitations and irreversible photochemical damage. This cytotype also presented gene-specific expression patterns under heat, up-regulating ATHB7. These findings provide insights into divergent stress response strategies and physiological resistance resulting from polyploidy, highlighting its widespread influence on plant function.
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Affiliation(s)
- Javier López-Jurado
- Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Apdo. 1095, E-41080 Sevilla, Spain
- School of Natural Sciences, University of Tasmania, Private Bag 55, Hobart, TAS 7001, Australia
| | - Jesús Picazo-Aragonés
- Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Apdo. 1095, E-41080 Sevilla, Spain
| | - Conchita Alonso
- Estación Biológica de Doñana, Consejo Superior de Investigaciones Científicas (CSIC), Avda. Américo Vespucio 26, E-41092 Sevilla, Spain
| | - Francisco Balao
- Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Apdo. 1095, E-41080 Sevilla, Spain
| | - Enrique Mateos-Naranjo
- Departamento de Biología Vegetal y Ecología, Facultad de Biología, Universidad de Sevilla, Apdo. 1095, E-41080 Sevilla, Spain
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5
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Li X, Zhang L, Wei X, Datta T, Wei F, Xie Z. Polyploidization: A Biological Force That Enhances Stress Resistance. Int J Mol Sci 2024; 25:1957. [PMID: 38396636 PMCID: PMC10888447 DOI: 10.3390/ijms25041957] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/24/2023] [Revised: 02/01/2024] [Accepted: 02/03/2024] [Indexed: 02/25/2024] Open
Abstract
Organisms with three or more complete sets of chromosomes are designated as polyploids. Polyploidy serves as a crucial pathway in biological evolution and enriches species diversity, which is demonstrated to have significant advantages in coping with both biotic stressors (such as diseases and pests) and abiotic stressors (like extreme temperatures, drought, and salinity), particularly in the context of ongoing global climate deterioration, increased agrochemical use, and industrialization. Polyploid cultivars have been developed to achieve higher yields and improved product quality. Numerous studies have shown that polyploids exhibit substantial enhancements in cell size and structure, physiological and biochemical traits, gene expression, and epigenetic modifications compared to their diploid counterparts. However, some research also suggested that increased stress tolerance might not always be associated with polyploidy. Therefore, a more comprehensive and detailed investigation is essential to complete the underlying stress tolerance mechanisms of polyploids. Thus, this review summarizes the mechanism of polyploid formation, the polyploid biochemical tolerance mechanism of abiotic and biotic stressors, and molecular regulatory networks that confer polyploidy stress tolerance, which can shed light on the theoretical foundation for future research.
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Affiliation(s)
- Xiaoying Li
- Henan International Joint Laboratory of Crop Gene Resources and Improvements, School of Agricultural Sciences, Zhengzhou University, Zhengzhou 450001, China
- Institute of Horticulture, Henan Academy of Agricultural Sciences, Graduate T & R Base of Zhengzhou University, Zhengzhou 450002, China
| | - Luyue Zhang
- Henan International Joint Laboratory of Crop Gene Resources and Improvements, School of Agricultural Sciences, Zhengzhou University, Zhengzhou 450001, China
| | - Xiaochun Wei
- Institute of Horticulture, Henan Academy of Agricultural Sciences, Graduate T & R Base of Zhengzhou University, Zhengzhou 450002, China
| | - Tanusree Datta
- Henan International Joint Laboratory of Crop Gene Resources and Improvements, School of Agricultural Sciences, Zhengzhou University, Zhengzhou 450001, China
| | - Fang Wei
- Henan International Joint Laboratory of Crop Gene Resources and Improvements, School of Agricultural Sciences, Zhengzhou University, Zhengzhou 450001, China
| | - Zhengqing Xie
- Henan International Joint Laboratory of Crop Gene Resources and Improvements, School of Agricultural Sciences, Zhengzhou University, Zhengzhou 450001, China
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Fonollá A, Hormaza JI, Losada JM. Foliar Pectins and Physiology of Diploid and Autotetraploid Mango Genotypes under Water Stress. PLANTS (BASEL, SWITZERLAND) 2023; 12:3738. [PMID: 37960094 PMCID: PMC10650725 DOI: 10.3390/plants12213738] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/16/2023] [Revised: 10/24/2023] [Accepted: 10/24/2023] [Indexed: 11/15/2023]
Abstract
The cultivation of mango in Mediterranean-type climates is challenged by the depletion of freshwater. Polyploids are alternative genotypes with potential greater water use efficiency, but field evaluations of the anatomy and physiology of conspecific adult polyploid trees under water stress remain poorly explored. We combined field anatomical evaluations with measurements of leaf water potential (Ψl) and stomatal conductance (Gs) comparing one diploid and one autotetraploid tree per treatment with and without irrigation during dry summers (when fruits develop). Autotetraploid leaves displayed lower Ψl and Gs in both treatments, but the lack of irrigation only affected Gs. Foliar cells of the adaxial epidermis and the spongy mesophyll contained linear pectin epitopes, whereas branched pectins were localized in the abaxial epidermis, the chloroplast membrane, and the sieve tube elements of the phloem. Cell and fruit organ size was larger in autotetraploid than in diploid mango trees, but the sugar content in the fruits was similar between both cytotypes. Specific cell wall hygroscopic pectins correlate with more stable Ψl of autotetraploid leaves under soil water shortage, keeping lower Gs compared with diploids. These preliminary results point to diploids as more susceptible to water deficits than tetraploids.
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Affiliation(s)
| | | | - Juan M. Losada
- Institute for Mediterranean and Subtropical Horticulture ‘La Mayora’ (IHSM La Mayora—CSIC—UMA), Avda. Dr. Wienberg s/n, 29750 Malaga, Spain; (A.F.); (J.I.H.)
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7
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Lindroth RL, Wooley SC, Donaldson JR, Rubert-Nason KF, Morrow CJ, Mock KE. Phenotypic Variation in Phytochemical Defense of Trembling Aspen in Western North America: Genetics, Development, and Geography. J Chem Ecol 2023; 49:235-250. [PMID: 36765024 DOI: 10.1007/s10886-023-01409-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2022] [Revised: 02/01/2023] [Accepted: 02/02/2023] [Indexed: 02/12/2023]
Abstract
Trembling aspen (Populus tremuloides) is arguably the most important deciduous tree species in the Intermountain West of North America. There, as elsewhere in its range, aspen exhibits remarkable genetic variation in observable traits such as morphology and phenology. In contrast to Great Lakes populations, however, relatively little is known about phytochemical variation in western aspen. This survey of phytochemistry in western aspen was undertaken to assess how chemical expression varies among genotypes, cytotypes (diploid vs. triploid), and populations, and in response to development and mammalian browsing. We measured levels of foliar nitrogen, salicinoid phenolic glycosides (SPGs) and condensed tannins (CTs), as those constituents influence organismal interactions and ecosystem processes. Results revealed striking genotypic variation and considerable population variation, but minimal cytotype variation, in phytochemistry of western aspen. Levels of SPGs and nitrogen declined, whereas levels of CTs increased, with tree age. Browsed ramets had much higher levels of SPGs, and lower levels of CTs, than unbrowsed ramets of the same genotype. We then evaluated how composite chemical profiles of western aspen differ from those of Great Lakes aspen (assessed in earlier research). Interestingly, mature western aspen trees maintain much higher levels of SPGs, and lower levels of CTs, than Great Lakes aspen. Phenotypic variation in chemical composition of aspen - a foundation species - in the Intermountain West likely has important consequences for organismal interactions and forest ecosystem dynamics. Moreover, those consequences likely play out over spatial and temporal scales somewhat differently than have been documented for Great Lakes aspen.
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Affiliation(s)
- Richard L Lindroth
- Department of Entomology, University of Wisconsin-Madison, Madison, WI, 53706, USA.
| | - Stuart C Wooley
- Department of Entomology, University of Wisconsin-Madison, Madison, WI, 53706, USA
- Department of Biological Sciences, California State University-Stanislaus, Turlock, CA, 95382, USA
| | - Jack R Donaldson
- Department of Zoology, University of Wisconsin-Madison, Madison, WI, 53706, USA
- , Orem, UT, USA
| | - Kennedy F Rubert-Nason
- Department of Entomology, University of Wisconsin-Madison, Madison, WI, 53706, USA
- Division of Natural Sciences, University of Maine at Fort Kent, Fort Kent, ME, 04743, USA
| | - Clay J Morrow
- Department of Forest and Wildlife Ecology, University of Wisconsin-Madison, Madison, WI, 53706, USA
| | - Karen E Mock
- Department of Wildland Resources and Ecology Center, Utah State University, Logan, UT, 84322, USA
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8
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Blonder BW, Brodrick PG, Chadwick KD, Carroll E, Cruz-de Hoyos RM, Expósito-Alonso M, Hateley S, Moon M, Ray CA, Tran H, Walton JA. Climate lags and genetics determine phenology in quaking aspen (Populus tremuloides). THE NEW PHYTOLOGIST 2023; 238:2313-2328. [PMID: 36856334 DOI: 10.1111/nph.18850] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2022] [Accepted: 02/19/2023] [Indexed: 05/19/2023]
Abstract
Spatiotemporal patterns of phenology may be affected by mosaics of environmental and genetic variation. Environmental drivers may have temporally lagged impacts, but patterns and mechanisms remain poorly known. We combine multiple genomic, remotely sensed, and physically modeled datasets to determine the spatiotemporal patterns and drivers of canopy phenology in quaking aspen, a widespread clonal dioecious tree species with diploid and triploid cytotypes. We show that over 391 km2 of southwestern Colorado: greenup date, greendown date, and growing season length vary by weeks and differ across sexes, cytotypes, and genotypes; phenology has high phenotypic plasticity and heritabilities of 31-61% (interquartile range); and snowmelt date, soil moisture, and air temperature predict phenology, at temporal lags of up to 3 yr. Our study shows that lagged environmental effects are needed to explain phenological variation and that the effect of cytotype on phenology is obscured by its correlation with topography. Phenological patterns are consistent with responses to multiyear accumulation of carbon deficit or hydraulic damage.
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Affiliation(s)
- Benjamin W Blonder
- Department of Environmental Science, Policy, and Management, University of California - Berkeley, Berkeley, CA, 94720, USA
- Rocky Mountain Biological Laboratory, Crested Butte, CO, 81224, USA
| | - Philip G Brodrick
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, 91109, USA
| | - K Dana Chadwick
- Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA, 91109, USA
| | - Erin Carroll
- Department of Environmental Science, Policy, and Management, University of California - Berkeley, Berkeley, CA, 94720, USA
- Rocky Mountain Biological Laboratory, Crested Butte, CO, 81224, USA
| | - Roxanne M Cruz-de Hoyos
- Department of Environmental Science, Policy, and Management, University of California - Berkeley, Berkeley, CA, 94720, USA
- Rocky Mountain Biological Laboratory, Crested Butte, CO, 81224, USA
| | | | - Shannon Hateley
- Department of Plant Biology, Carnegie Institution for Science, Stanford, CA, 94305, USA
| | - Minkyu Moon
- Department of Earth & Environment, Boston University, Boston, MA, 02215, USA
| | - Courtenay A Ray
- Department of Environmental Science, Policy, and Management, University of California - Berkeley, Berkeley, CA, 94720, USA
- Rocky Mountain Biological Laboratory, Crested Butte, CO, 81224, USA
| | - Hoang Tran
- Department of Civil and Environmental Engineering, Princeton University, Princeton, NJ, 08540, USA
- Atmospheric Sciences & Global Change Division, Pacific Northwest National Laboratory, Richland, WA, 99354, USA
| | - James A Walton
- Molecular Ecology Laboratory, Department of Wildland Resources, Utah State University, Logan, UT, 84322, USA
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Kerr KL, Fickle JC, Anderegg WRL. Decoupling of functional traits from intraspecific patterns of growth and drought stress resistance. THE NEW PHYTOLOGIST 2023. [PMID: 37129078 DOI: 10.1111/nph.18937] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/10/2022] [Accepted: 03/07/2023] [Indexed: 05/03/2023]
Abstract
Intraspecific variation in functional traits may mediate tree species' drought resistance, yet whether trait variation is due to genotype (G), environment (E), or G×E interactions remains unknown. Understanding the drivers of intraspecific trait variation and whether variation mediates drought response can improve predictions of species' response to future drought. Using populations of quaking aspen spanning a climate gradient, we investigated intraspecific variation in functional traits in the field as well as the influence of G and E among propagules in a common garden. We also tested for trait-mediated trade-offs in growth and drought stress tolerance. We observed intraspecific trait variation among the populations, yet this variation did not necessarily translate to higher drought stress tolerance in hotter/drier populations. Additionally, plasticity in the common garden was low, especially in propagules derived from the hottest/driest population. We found no growth-drought stress tolerance trade-offs and few traits exhibited significant relationships with mortality in the natural populations, suggesting that intraspecific trait variation among the traits measured did not strongly mediate responses to drought stress. Our results highlight the limits of trait-mediated responses to drought stress and the complex G×E interactions that may underlie drought stress tolerance variation in forests in dry environments.
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Affiliation(s)
- Kelly L Kerr
- School of Biological Sciences, University of Utah, Salt Lake City, UT, 84112, USA
| | - Jaycie C Fickle
- School of Biological Sciences, University of Utah, Salt Lake City, UT, 84112, USA
| | - William R L Anderegg
- School of Biological Sciences, University of Utah, Salt Lake City, UT, 84112, USA
- Wilkes Center for Climate Science and Policy, University of Utah, Salt Lake City, UT, 84112, USA
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10
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Wang M, Li G, Feng Z, Liu Y, Yuan X, Uscola M. A wider spectrum of avoidance and tolerance mechanisms explained ozone sensitivity of two white poplar ploidy levels. ANNALS OF BOTANY 2023; 131:655-666. [PMID: 36694346 PMCID: PMC10147324 DOI: 10.1093/aob/mcad019] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/16/2022] [Accepted: 01/23/2023] [Indexed: 05/20/2023]
Abstract
BACKGROUND AND AIMS Polyploidization can improve plant mass yield for bioenergy support, yet few studies have investigated ozone (O3) sensitivity linked to internal regulatory mechanisms at different ploidy levels. METHODS Diploid and triploid Populus tomentosa plants were exposed to ambient and ambient plus 60 ppb [O3]. We explored their differences in sensitivity (leaf morphological, physiological and biochemical traits, and plant mass) as well as mechanisms of avoidance (stomatal conductance, xanthophyll cycle, thermal dissipation) and tolerance (ROS scavenging system) in response to O3 at two developmental phases. KEY RESULTS Triploid plants had the highest plant growth under ambient O3, even under O3 fumigation. However, triploid plants were the most sensitive to O3 and under elevated O3 showed the largest decreases in photosynthetic capacity and performance, as well as increased shoot:root ratio, and the highest lipid peroxidation. Thus, plant mass production could be impacted in triploid plants under long-term O3 contamination. Both diploid and triploid plants reduced stomatal aperture in response to O3, thereby reducing O3 entrance, yet only in diploid plants was reduced stomatal aperture associated with minimal (non-significant) damage to photosynthetic pigments and lower lipid peroxidation. CONCLUSIONS Tolerance mechanisms of plants of both ploidy levels mainly focused on the enzymatic reduction of hydrogen peroxide through catalase and peroxidase, yet these homeostatic regulatory mechanisms were higher in diploid plants. Our study recommends triploid white poplar as a bioenergy species only under short-term O3 contamination. Under continuously elevated O3 over the long term, diploid white poplar may perform better.
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Affiliation(s)
- Miaomiao Wang
- Key Laboratory for Silviculture and Conservation, Ministry of Education, Beijing Forestry University, Beijing 100083, China
| | - Guolei Li
- Key Laboratory for Silviculture and Conservation, Ministry of Education, Beijing Forestry University, Beijing 100083, China
- Research Center of Deciduous Oaks, Beijing Forestry University, Beijing 100083, China
- National Innovation Alliance of Valuable Deciduous Tree Industry, Beijing Forestry University, Beijing 100083, China
| | - Zhaozhong Feng
- Key Laboratory of Agrometeorology of Jiangsu Province, Institute of Ecology, School of Applied Meteorology, Nanjing University of Information Science and Technology, Nanjing 210044, China
| | - Yong Liu
- Key Laboratory for Silviculture and Conservation, Ministry of Education, Beijing Forestry University, Beijing 100083, China
- Research Center of Deciduous Oaks, Beijing Forestry University, Beijing 100083, China
- National Innovation Alliance of Valuable Deciduous Tree Industry, Beijing Forestry University, Beijing 100083, China
| | - Xiangyang Yuan
- State Key Laboratory of Urban and Regional Ecology, Research Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing 100085, China
| | - Mercedes Uscola
- Universidad de Alcalá, Forest Ecology and Restoration Group, Departamento de Ciencias de la Vida, U.D. Ecología, Apdo. 20, E-28805, Alcalá de Henares, Madrid, Spain
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11
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Losada JM, Blanco-Moure N, Fonollá A, Martínez-Ferrí E, Hormaza JI. Hydraulic trade-offs underlie enhanced performance of polyploid trees under soil water deficit. PLANT PHYSIOLOGY 2023:kiad204. [PMID: 37002827 DOI: 10.1093/plphys/kiad204] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2022] [Revised: 03/03/2023] [Accepted: 03/30/2023] [Indexed: 06/19/2023]
Abstract
The relationships between aerial organ morpho-anatomy of woody polyploid plants with their functional hydraulics under water stress remain largely understudied. We evaluated growth-associated traits, aerial organ xylem anatomy, and physiological parameters of diploid, triploid, and tetraploid genotypes of atemoyas (Annona cherimola x Annona squamosa), which belong to the woody perennial genus Annona (Annonaceae), testing their performance under long-term soil water reduction. The contrasting phenotypes of vigorous triploids and dwarf tetraploids consistently showed stomatal size-density trade-off. The vessel elements in aerial organs were ∼1.5 times wider in polyploids compared with diploids, and triploids displayed the lowest vessel density. Plant hydraulic conductance was higher in well-irrigated diploids while their tolerance to drought was lower. The phenotypic disparity of atemoya polyploids associated with contrasting leaf and stem xylem porosity traits that coordinate to regulate water balances between the trees and the belowground and aboveground environments. Polyploid trees displayed better performance under soil water scarcity, presenting as more sustainable agricultural and forestry genotypes to cope with water stress.
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Affiliation(s)
- Juan M Losada
- Department of Subtropical Fruit Crops. Institute for Mediterranean and Subtropical Horticulture "La Mayora" (IHSM La Mayora - CSIC - UMA. Av. Dr. Wienberg s/n. Algarrobo-Costa, 29750, Málaga, Spain
| | - Nuria Blanco-Moure
- Department of Subtropical Fruit Crops. Institute for Mediterranean and Subtropical Horticulture "La Mayora" (IHSM La Mayora - CSIC - UMA. Av. Dr. Wienberg s/n. Algarrobo-Costa, 29750, Málaga, Spain
| | - Andrés Fonollá
- Department of Subtropical Fruit Crops. Institute for Mediterranean and Subtropical Horticulture "La Mayora" (IHSM La Mayora - CSIC - UMA. Av. Dr. Wienberg s/n. Algarrobo-Costa, 29750, Málaga, Spain
| | - Elsa Martínez-Ferrí
- Fruticultura Subtropical y Mediterránea, IFAPA, JA, Associated Unit to CSIC by IHSM and IAS. Department of Natural and Forest Resources (IFAPA). Cortijo de la Cruz, 29140, Málaga, Spain
| | - José I Hormaza
- Department of Subtropical Fruit Crops. Institute for Mediterranean and Subtropical Horticulture "La Mayora" (IHSM La Mayora - CSIC - UMA. Av. Dr. Wienberg s/n. Algarrobo-Costa, 29750, Málaga, Spain
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12
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Eisenring M, Lindroth RL, Flansburg A, Giezendanner N, Mock KE, Kruger EL. Genotypic variation rather than ploidy level determines functional trait expression in a foundation tree species in the presence and absence of environmental stress. ANNALS OF BOTANY 2023; 131:229-242. [PMID: 35641114 PMCID: PMC9904343 DOI: 10.1093/aob/mcac071] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Accepted: 05/28/2022] [Indexed: 05/25/2023]
Abstract
BACKGROUND AND AIMS At the population level, genetic diversity is a key determinant of a tree species' capacity to cope with stress. However, little is known about the relative importance of the different components of genetic diversity for tree stress responses. We compared how two sources of genetic diversity, genotype and cytotype (i.e. differences in ploidy levels), influence growth, phytochemical and physiological traits of Populus tremuloides in the presence and absence of environmental stress. METHODS In a series of field studies, we first assessed variation in traits across diploid and triploid aspen genotypes from Utah and Wisconsin under non-stressed conditions. In two follow-up experiments, we exposed diploid and triploid aspen genotypes from Wisconsin to individual and interactive drought stress and defoliation treatments and quantified trait variations under stress. KEY RESULTS We found that (1) tree growth and associated traits did not differ significantly between ploidy levels under non-stressed conditions. Instead, variation in tree growth and most other traits was driven by genotypic and population differences. (2) Genotypic differences were critical for explaining variation of most functional traits and their responses to stress. (3) Ploidy level played a subtle role in shaping traits and trait stress responses, as its influence was typically obscured by genotypic differences. (4) As an exception to the third conclusion, we showed that triploid trees expressed 17 % higher foliar defence (tremulacin) levels, 11 % higher photosynthesis levels and 23 % higher rubisco activity under well-watered conditions. Moreover, triploid trees displayed greater drought resilience than diploids as they produced 35 % more new tissue than diploids when recovering from drought stress. CONCLUSION Although ploidy level can strongly influence the ecology of tree species, those effects may be relatively small in contrast to the effects of genotypic variation in highly diverse species.
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Affiliation(s)
| | - Richard L Lindroth
- Department of Entomology, University of Wisconsin-Madison, 1630 Linden Dr., Madison, WI, USA
| | - Amy Flansburg
- Department of Forest and Wildlife Ecology, University of Wisconsin-Madison, 1630 Linden Dr., Madison, WIUSA
| | - Noreen Giezendanner
- Department of Entomology, University of Wisconsin-Madison, 1630 Linden Dr., Madison, WI, USA
| | - Karen E Mock
- Department of Wildland Resources and Ecology Center, 5230 Old Main Hill, Utah State University, Logan, UT, USA
| | - Eric L Kruger
- Department of Forest and Wildlife Ecology, University of Wisconsin-Madison, 1630 Linden Dr., Madison, WIUSA
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13
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DeRose RJ, Gardner RS, Lindroth RL, Mock KE. Polyploidy and growth-defense tradeoffs in natural populations of western quaking Aspen. J Chem Ecol 2022; 48:431-440. [PMID: 35416535 DOI: 10.1007/s10886-022-01355-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2021] [Revised: 02/10/2022] [Accepted: 02/17/2022] [Indexed: 10/18/2022]
Abstract
Polyploidy, the expression of more than two sets of chromosomes, is common in plants, and is thought to influence plant trait expression and drive plant species evolution. The degree to which polyploidy influences interactions among physiological processes such as growth and defense in natural populations through its effect on phenotypic variability is poorly understood. We link broad plant genotypic features (including polyploidy) to phenotypic expression of growth and chemical defense in natural populations of quaking aspen (Populus tremuloides) to examine patterns in resource allocation that might drive growth-defense tradeoffs. Quaking aspen are capable of rapid growth, and are also a primary food plant for a large range of herbivores, including insects and ungulates. While often diploid, aspen can exhibit polyploidy as triploid clones. We tested for the effect of genotype, cytotype (ploidy level, divided between diploids and triploids), and ramet age on relationships between growth and leaf chemistry across natural aspen clones in northern Utah. Substantial genotype variability in growth and leaf chemistry occurred across both cytotypes. Phenolic glycosides, but not condensed tannins, were negatively related to growth. Ramet age was also negatively related to growth. Phenolic glycosides were negatively related to condensed tannins, but only for the diploid clones. Triploid clones exhibited ~ 20% higher levels of phenolic glycosides than diploids. Growth in quaking aspen was likely sacrificed for the production of phenolic glycosides. Our study underscores the importance of considering polyploidy, genetic variability, and ramet age in understanding growth-defense tradeoffs in natural populations of clonal organisms, such as quaking aspen.
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Affiliation(s)
- R Justin DeRose
- Department of Wildland Resources and Ecology Center, Utah State University, 5230, Old Main, USA.
| | - Richard S Gardner
- Department of Wildland Resources and Ecology Center, Utah State University, 5230, Old Main, USA.,USDA Forest Service, Umatilla National Forest, 72510 Coyote Road, 97801, Pendleton, OR, USA
| | - Richard L Lindroth
- Department of Entomology, University of Wisconsin-Madison, 1630 Linden Drive, Madison, WI, USA
| | - Karen E Mock
- Department of Wildland Resources and Ecology Center, Utah State University, 5230, Old Main, USA
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14
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Chen Z, Grossfurthner L, Loxterman JL, Masingale J, Richardson BA, Seaborn T, Smith B, Waits LP, Narum SR. Applying genomics in assisted migration under climate change: Framework, empirical applications, and case studies. Evol Appl 2022; 15:3-21. [PMID: 35126645 PMCID: PMC8792483 DOI: 10.1111/eva.13335] [Citation(s) in RCA: 10] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2021] [Revised: 11/18/2021] [Accepted: 12/01/2021] [Indexed: 12/01/2022] Open
Abstract
The rate of global climate change is projected to outpace the ability of many natural populations and species to adapt. Assisted migration (AM), which is defined as the managed movement of climate-adapted individuals within or outside the species ranges, is a conservation option to improve species' adaptive capacity and facilitate persistence. Although conservation biologists have long been using genetic tools to increase or maintain diversity of natural populations, genomic techniques could add extra benefit in AM that include selectively neutral and adaptive regions of the genome. In this review, we first propose a framework along with detailed procedures to aid collaboration among scientists, agencies, and local and regional managers during the decision-making process of genomics-guided AM. We then summarize the genomic approaches for applying AM, followed by a literature search of existing incorporation of genomics in AM across taxa. Our literature search initially identified 729 publications, but after filtering returned only 50 empirical studies that were either directly applied or considered genomics in AM related to climate change across taxa of plants, terrestrial animals, and aquatic animals; 42 studies were in plants. This demonstrated limited application of genomic methods in AM in organisms other than plants, so we provide further case studies as two examples to demonstrate the negative impact of climate change on non-model species and how genomics could be applied in AM. With the rapidly developing sequencing technology and accumulating genomic data, we expect to see more successful applications of genomics in AM, and more broadly, in the conservation of biodiversity.
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Affiliation(s)
- Zhongqi Chen
- Aquaculture Research InstituteUniversity of IdahoHagermanIdahoUSA
| | - Lukas Grossfurthner
- Bioinformatics and Computational Biology Graduate ProgramUniversity of IdahoHagermanIdahoUSA
| | - Janet L. Loxterman
- Department of Biological SciencesIdaho State UniversityPocatelloIdahoUSA
| | | | | | - Travis Seaborn
- Department of Fish and Wildlife ResourcesUniversity of IdahoMoscowIdahoUSA
| | - Brandy Smith
- Department of Biological SciencesIdaho State UniversityPocatelloIdahoUSA
| | - Lisette P. Waits
- Department of Fish and Wildlife ResourcesUniversity of IdahoMoscowIdahoUSA
| | - Shawn R. Narum
- Columbia River Inter‐Tribal Fish CommissionHagermanIdahoUSA
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15
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Blonder B, Ray CA, Walton JA, Castaneda M, Chadwick KD, Clyne MO, Gaüzère P, Iversen LL, Lusk M, Strimbeck GR, Troy S, Mock KE. Cytotype and genotype predict mortality and recruitment in Colorado quaking aspen (Populus tremuloides). ECOLOGICAL APPLICATIONS : A PUBLICATION OF THE ECOLOGICAL SOCIETY OF AMERICA 2021; 31:e02438. [PMID: 34374163 DOI: 10.1002/eap.2438] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2020] [Revised: 02/27/2021] [Accepted: 04/16/2021] [Indexed: 06/13/2023]
Abstract
Species responses to climate change depend on environment, genetics, and interactions among these factors. Intraspecific cytotype (ploidy level) variation is a common type of genetic variation in many species. However, the importance of intraspecific cytotype variation in determining demography across environments is poorly known. We studied quaking aspen (Populus tremuloides), which occurs in diploid and triploid cytotypes. This widespread tree species is experiencing contractions in its western range, which could potentially be linked to cytotype-dependent drought tolerance. We found that interactions between cytotype and environment drive mortality and recruitment across 503 plots in Colorado. Triploids were more vulnerable to mortality relative to diploids and had reduced recruitment on more drought-prone and disturbed plots relative to diploids. Furthermore, there was substantial genotype-dependent variation in demography. Thus, cytotype and genotype variation are associated with decline in this foundation species. Future assessment of demographic responses to climate change will benefit from knowledge of how genetic and environmental mosaics interact to determine species' ecophysiology and demography.
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Affiliation(s)
- Benjamin Blonder
- School of Life Sciences, Arizona State University, Tempe, Arizona, 85281, USA
- Rocky Mountain Biological Laboratory, Crested Butte, Colorado, 81224, USA
- Department of Environmental Science, Policy, and Management, University of California, Berkeley, California, 94720, USA
| | - Courtenay A Ray
- School of Life Sciences, Arizona State University, Tempe, Arizona, 85281, USA
- Rocky Mountain Biological Laboratory, Crested Butte, Colorado, 81224, USA
- Department of Environmental Science, Policy, and Management, University of California, Berkeley, California, 94720, USA
| | - James A Walton
- Department of Wildland Resources and Ecology Center, Utah State University, Logan, Utah, 84322-5230, USA
| | - Marco Castaneda
- Rocky Mountain Biological Laboratory, Crested Butte, Colorado, 81224, USA
- East Los Angeles College, Monterey Park, California, 91754, USA
| | - K Dana Chadwick
- Department of Earth System Science, Stanford University, Stanford, California, 94305, USA
- Climate and Ecosystems Division, Lawrence Berkeley National Laboratory, Berkeley, California, 94720, USA
| | - Michael O Clyne
- School of Life Sciences, Arizona State University, Tempe, Arizona, 85281, USA
| | - Pierre Gaüzère
- School of Life Sciences, Arizona State University, Tempe, Arizona, 85281, USA
| | - Lars L Iversen
- School of Life Sciences, Arizona State University, Tempe, Arizona, 85281, USA
| | - Madison Lusk
- School of Life Sciences, Arizona State University, Tempe, Arizona, 85281, USA
| | - G Richard Strimbeck
- Department of Biology, Norwegian University of Science and Technology, Trondheim, 7491, Norway
| | - Savannah Troy
- Rocky Mountain Biological Laboratory, Crested Butte, Colorado, 81224, USA
| | - Karen E Mock
- Department of Wildland Resources and Ecology Center, Utah State University, Logan, Utah, 84322-5230, USA
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16
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Liu H, Sun H, Bao L, Han S, Hui T, Zhang R, Zhang M, Su C, Qian Y, Jiao F. Secondary Metabolism and Hormone Response Reveal the Molecular Mechanism of Triploid Mulberry ( Morus Alba L.) Trees Against Drought. FRONTIERS IN PLANT SCIENCE 2021; 12:720452. [PMID: 34691101 PMCID: PMC8528201 DOI: 10.3389/fpls.2021.720452] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Accepted: 09/01/2021] [Indexed: 06/13/2023]
Abstract
The improvement of a plant's tolerance to drought is a major endeavor in agriculture. Polyploid plants often exhibit enhanced stress tolerance relative to their diploid progenitor, but the matching stress tolerance is still little understood. Own-rooted stem cuttings of mulberry (Morus alba L.) cultivar Shinichinose (2n = 2x = 28) and Shaansang-305 (2n = 3x = 42) were used in this study, of which the latter (triploid) has more production and application purposes. The responses of triploid Shaansang-305 and diploid progenitor ShinIchinose under drought stress were compared through an investigation of their physiological traits, RNA-seq, and secondary metabolome analysis. The results showed that the triploid exhibited an augmented abscisic acid (ABA) content and a better stress tolerance phenotype under severe drought stress. Further, in the triploid plant some genes (TSPO, NCED3, and LOC21398866) and ATG gene related to ABA signaling showed significantly upregulated expression. Interestingly, the triploid accumulated higher levels of RWC and SOD activity, as well as more wax on the leaf surface, but with less reductive flavonoid than in diploid. Our results suggest triploid plants may better adapt to with drought events. Furthermore, the flavonoid metabolism involved in drought resistance identified here may be of great value to medicinal usage of mulberry. The findings presented here could have substantial implications for future studies of crop breeding.
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Affiliation(s)
- Hui Liu
- The Sericultural and Silk Research Institute, College of Animal Science and Technology, Northwest A&F University, Xianyang, China
| | - Hongmei Sun
- The Sericultural and Silk Research Institute, College of Animal Science and Technology, Northwest A&F University, Xianyang, China
| | - Lijun Bao
- The Sericultural and Silk Research Institute, College of Animal Science and Technology, Northwest A&F University, Xianyang, China
- Shaanxi Key Laboratory of Sericulture, Ankang University, Ankang, China
| | - Shuhua Han
- The Sericultural and Silk Research Institute, College of Animal Science and Technology, Northwest A&F University, Xianyang, China
| | - Tian Hui
- The Sericultural and Silk Research Institute, College of Animal Science and Technology, Northwest A&F University, Xianyang, China
| | - Rui Zhang
- The Sericultural and Silk Research Institute, College of Animal Science and Technology, Northwest A&F University, Xianyang, China
| | - Minjuan Zhang
- The Sericultural and Silk Research Institute, College of Animal Science and Technology, Northwest A&F University, Xianyang, China
| | - Chao Su
- The Sericultural and Silk Research Institute, College of Animal Science and Technology, Northwest A&F University, Xianyang, China
| | - Yonghua Qian
- The Sericultural and Silk Research Institute, College of Animal Science and Technology, Northwest A&F University, Xianyang, China
| | - Feng Jiao
- The Sericultural and Silk Research Institute, College of Animal Science and Technology, Northwest A&F University, Xianyang, China
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17
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Chen T, Sheng Y, Hao Z, Long X, Fu F, Liu Y, Tang Z, Ali A, Peng Y, Liu Y, Lu L, Hu X, Shi J, Chen J. Transcriptome and proteome analysis suggest enhanced photosynthesis in tetraploid Liriodendron sino-americanum. TREE PHYSIOLOGY 2021; 41:1953-1971. [PMID: 33791793 PMCID: PMC8498940 DOI: 10.1093/treephys/tpab039] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2020] [Accepted: 02/17/2021] [Indexed: 06/01/2023]
Abstract
Polyploidy generally provides an advantage in phenotypic variation and growth vigor. However, the underlying mechanisms remain poorly understood. The tetraploid Liriodendron sino-americanum (Liriodendron × sinoamericanum P.C Yieh ex C.B. Shang & Zhang R.Wang) exhibits altered morphology compared with its diploid counterpart, including larger, thicker and deeper green leaves, bigger stomata, thicker stems and increased tree height. Such characteristics can be useful in ornamental and industrial applications. To elucidate the molecular mechanisms behind this variation, we performed a comparative transcriptome and proteome analysis. Our transcriptome data indicated that some photosynthesis genes and pathways were differentially altered and enriched in tetraploid L. sino-americanum, mainly related to F-type ATPase, the cytochrome b6/f complex, photosynthetic electron transport, the light harvesting chlorophyll protein complexes, and photosystem I and II. Most of the differentially expressed proteins we could identify are also involved in photosynthesis. Our physiological results showed that tetraploids have an enhanced photosynthetic capacity, concomitant with great levels of sugar and starch in leaves. This suggests that tetraploid L. sino-americanum might experience comprehensive transcriptome reprogramming of genes related to photosynthesis. This study has especially emphasized molecular changes involved in photosynthesis that accompany polyploidy, and provides a possible explanation for the altered phenotype of polyploidy plants in comparison with their diploid form.
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Affiliation(s)
- Tingting Chen
- Key Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China
| | - Yu Sheng
- Key Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China
| | - Zhaodong Hao
- Key Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China
| | - Xiaofei Long
- Key Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China
| | - Fangfang Fu
- College of Forestry, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China
| | - Yang Liu
- School of Forestry, Northeast Forestry University, 26 Hexing Rd, Xiangfang District, Harbin 150040, China
| | - Zhonghua Tang
- College of Chemistry, Chemical Engineer and Resource Utilization, Northeast Forestry University, 26 Hexing Rd, Xiangfang District, Harbin 150040, China
| | - Asif Ali
- Key Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China
| | - Ye Peng
- College of Biology and the Environment, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China
| | - Yang Liu
- Key Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China
| | - Lu Lu
- Key Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China
| | - Xiangyang Hu
- Shanghai Key Laboratory of Bio-Energy Crops, School of Life Sciences, Shanghai University, 266 Jufeng Rd, Baoshan, Shanghai 201900, China
| | - Jisen Shi
- Key Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China
| | - Jinhui Chen
- Key Laboratory of Forest Genetics and Biotechnology of Ministry of Education of China, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, 159 Longpan Rd, Xuanwu, Nanjing 210037, China
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18
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Faralli M, Williams K, Corke F, Li M, Doonan JH, Varotto C. Interspecific and intraspecific phenotypic diversity for drought adaptation in bioenergy Arundo species. GLOBAL CHANGE BIOLOGY. BIOENERGY 2021; 13:753-769. [PMID: 33777185 PMCID: PMC7986115 DOI: 10.1111/gcbb.12810] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/15/2020] [Accepted: 01/11/2021] [Indexed: 05/29/2023]
Abstract
Biomass crops are commonly grown in low-grade land and selection of drought-tolerant accessions is of major importance to sustain productivity. In this work, we assess phenotypic variation under different environmental scenarios in a series of accessions of Arundo donax, and contrast it with two closely related species, Arundo donaciformis and Arundo plinii. Gas-exchange and stomatal anatomy analysis showed an elevated photosynthetic capacity in A. plinii compared to A. donax and A. donaciformis with a significant intraspecific variation in A. donax. The three species showed significantly contrasting behaviour of transpiration under developing water stress and increasing vapour pressure deficit (VPD), with A. donax being the most conservative while A. plinii showed an elevated degree of insensitivity to environmental cues. Under optimal conditions, A. donax had the highest estimated leaf area (projected leaf area) and plant dry weight although a significant reduction under water stress was observed for A. donax and A. donaciformis accessions while no differences were recorded for A. plinii between optimal growing conditions (well-watered [WW]) and reduced soil water availability (water-stressed [WS]). A. donax displayed a markedly conservative water use behaviour but elevated sensitivity of biomass accumulation under stress conditions. By contrast, in A. plinii, biomass and transpiration were largely insensitive to WS and increasing VPD, though biomass dry weight under optimal conditions was significantly lower than A. donax. We provide evidence of interspecific phenotypic variation within the Arundo genus while the intraspecific phenotypic plasticity may be exploited for further selection of superior clones under disadvantageous environmental conditions. The extensive trade-off between water use and biomass accumulation present in the three species under stress conditions provides a series of novel traits to be exploited in the selection of superior clones adapted to different environmental scenarios. Non-destructive approaches are provided to screen large populations for water-stress-tolerant A. donax clones.
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Affiliation(s)
- Michele Faralli
- Department of Biodiversity and Molecular Ecology, Research and Innovation CentreFondazione Edmund MachSan Michele all'Adige (TN)Italy
| | - Kevin Williams
- National Plant Phenomics Centre (NPPC)IBERSAberystwyth UniversityWalesUK
| | - Fiona Corke
- National Plant Phenomics Centre (NPPC)IBERSAberystwyth UniversityWalesUK
| | - Mingai Li
- Department of Biodiversity and Molecular Ecology, Research and Innovation CentreFondazione Edmund MachSan Michele all'Adige (TN)Italy
| | - John H. Doonan
- National Plant Phenomics Centre (NPPC)IBERSAberystwyth UniversityWalesUK
| | - Claudio Varotto
- Department of Biodiversity and Molecular Ecology, Research and Innovation CentreFondazione Edmund MachSan Michele all'Adige (TN)Italy
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Glazier DS. Genome Size Covaries More Positively with Propagule Size than Adult Size: New Insights into an Old Problem. BIOLOGY 2021; 10:270. [PMID: 33810583 PMCID: PMC8067107 DOI: 10.3390/biology10040270] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 02/10/2021] [Revised: 03/18/2021] [Accepted: 03/23/2021] [Indexed: 12/17/2022]
Abstract
The body size and (or) complexity of organisms is not uniformly related to the amount of genetic material (DNA) contained in each of their cell nuclei ('genome size'). This surprising mismatch between the physical structure of organisms and their underlying genetic information appears to relate to variable accumulation of repetitive DNA sequences, but why this variation has evolved is little understood. Here, I show that genome size correlates more positively with egg size than adult size in crustaceans. I explain this and comparable patterns observed in other kinds of animals and plants as resulting from genome size relating strongly to cell size in most organisms, which should also apply to single-celled eggs and other reproductive propagules with relatively few cells that are pivotal first steps in their lives. However, since body size results from growth in cell size or number or both, it relates to genome size in diverse ways. Relationships between genome size and body size should be especially weak in large organisms whose size relates more to cell multiplication than to cell enlargement, as is generally observed. The ubiquitous single-cell 'bottleneck' of life cycles may affect both genome size and composition, and via both informational (genotypic) and non-informational (nucleotypic) effects, many other properties of multicellular organisms (e.g., rates of growth and metabolism) that have both theoretical and practical significance.
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20
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Sloan JL, Burney OT, Pinto JR. Drought-Conditioning of Quaking Aspen ( Populus tremuloides Michx.) Seedlings During Nursery Production Modifies Seedling Anatomy and Physiology. FRONTIERS IN PLANT SCIENCE 2020; 11:557894. [PMID: 33013975 PMCID: PMC7498648 DOI: 10.3389/fpls.2020.557894] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2020] [Accepted: 08/12/2020] [Indexed: 06/01/2023]
Abstract
In the western US, quaking aspen (Populus tremuloides Michx.) regenerates primarily by root suckers after disturbances such as low to moderate severity fires. Planting aspen seedlings grown from seed may provide a mechanism to improve restoration success and genetic diversity on severely disturbed sites. However, few studies have examined the use of container-grown aspen seedlings for restoration purposes from both the outplanting and nursery production perspective. Thus, the purpose of this novel study was to examine how alterations in irrigation levels during nursery production across three seed sources would impact seedling performance attributes on harsh, dry outplanting sites. Irrigation treatments were based on three irrigation levels, determined gravimetrically: High = 90%, Medium = 80%, and Low = 70% of container capacity. The three seed sources represented a latitudinal gradient across the aspen range (New Mexico, Utah, and Alberta). Carbon isotope analysis indicated irrigation treatments were effective in creating higher levels of water stress for both the Low and Medium irrigation levels compared to seedlings under the High irrigation level. Seedlings subject to the Low irrigation level were found to induce greater height, higher photosynthetic rates, larger percentages of hydraulically active xylem, and faster xylem flow velocities compared to the High irrigation level. The lack of an interaction between irrigation treatments and seed source for nearly all response variables suggests that nursery conditioning via irrigation limitations may be effective for a range of aspen seed sources.
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Affiliation(s)
- Joshua L. Sloan
- John T. Harrington Forestry Research Center, New Mexico State University, Mora, NM, United States
- Department of Forestry, New Mexico Highlands University, Las Vegas, NM, United States
| | - Owen T. Burney
- John T. Harrington Forestry Research Center, New Mexico State University, Mora, NM, United States
| | - Jeremiah R. Pinto
- Rocky Mountain Research Station, Forest Service, U.S. Department of Agriculture, Moscow, ID, United States
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21
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Zaiats A, Lazarus BE, Germino MJ, Serpe MD, Richardson BA, Buerki S, Caughlin TT. Intraspecific variation in surface water uptake in a perennial desert shrub. Funct Ecol 2020. [DOI: 10.1111/1365-2435.13546] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/31/2023]
Affiliation(s)
- Andrii Zaiats
- Department of Biological Sciences Boise State University Boise ID USA
| | - Brynne E. Lazarus
- U.S. Geological Survey, Forest and Rangeland Ecosystem Science Center Boise ID USA
| | - Matthew J. Germino
- U.S. Geological Survey, Forest and Rangeland Ecosystem Science Center Boise ID USA
| | - Marcelo D. Serpe
- Department of Biological Sciences Boise State University Boise ID USA
| | | | - Sven Buerki
- Department of Biological Sciences Boise State University Boise ID USA
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22
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De Ollas C, Morillón R, Fotopoulos V, Puértolas J, Ollitrault P, Gómez-Cadenas A, Arbona V. Facing Climate Change: Biotechnology of Iconic Mediterranean Woody Crops. FRONTIERS IN PLANT SCIENCE 2019; 10:427. [PMID: 31057569 PMCID: PMC6477659 DOI: 10.3389/fpls.2019.00427] [Citation(s) in RCA: 26] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/20/2018] [Accepted: 03/21/2019] [Indexed: 05/03/2023]
Abstract
The Mediterranean basin is especially sensitive to the adverse outcomes of climate change and especially to variations in rainfall patterns and the incidence of extremely high temperatures. These two concurring adverse environmental conditions will surely have a detrimental effect on crop performance and productivity that will be particularly severe on woody crops such as citrus, olive and grapevine that define the backbone of traditional Mediterranean agriculture. These woody species have been traditionally selected for traits such as improved fruit yield and quality or alteration in harvesting periods, leaving out traits related to plant field performance. This is currently a crucial aspect due to the progressive and imminent effects of global climate change. Although complete genome sequence exists for sweet orange (Citrus sinensis) and clementine (Citrus clementina), olive tree (Olea europaea) and grapevine (Vitis vinifera), the development of biotechnological tools to improve stress tolerance still relies on the study of the available genetic resources including interspecific hybrids, naturally occurring (or induced) polyploids and wild relatives under field conditions. To this respect, post-genomic era studies including transcriptomics, metabolomics and proteomics provide a wide and unbiased view of plant physiology and biochemistry under adverse environmental conditions that, along with high-throughput phenotyping, could contribute to the characterization of plant genotypes exhibiting physiological and/or genetic traits that are correlated to abiotic stress tolerance. The ultimate goal of precision agriculture is to improve crop productivity, in terms of yield and quality, making a sustainable use of land and water resources under adverse environmental conditions using all available biotechnological tools and high-throughput phenotyping. This review focuses on the current state-of-the-art of biotechnological tools such as high throughput -omics and phenotyping on grapevine, citrus and olive and their contribution to plant breeding programs.
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Affiliation(s)
- Carlos De Ollas
- Departament de Ciències Agràries i del Medi Natural, Universitat Jaume I, Castellón de la Plana, Spain
| | - Raphaël Morillón
- Centre de Coopération Internationale en Recherche Agronomique pour le Développement (CIRAD), Petit-Bourg, France
| | - Vasileios Fotopoulos
- Department of Agricultural Sciences, Biotechnology and Food Science, Cyprus University of Technology, Limassol, Cyprus
| | - Jaime Puértolas
- Lancaster Environment Centre, Lancaster University, Lancaster, United Kingdom
| | - Patrick Ollitrault
- Centre de Coopération Internationale en Recherche Agronomique pour le Développement (CIRAD), San-Giuliano, France
| | - Aurelio Gómez-Cadenas
- Departament de Ciències Agràries i del Medi Natural, Universitat Jaume I, Castellón de la Plana, Spain
| | - Vicent Arbona
- Departament de Ciències Agràries i del Medi Natural, Universitat Jaume I, Castellón de la Plana, Spain
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