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Wang H, Zhao Y, Tu J, Liang D, Li M, Wu F. Comparative analysis of differential gene expression reveals novel insights into the heteroblastic foliage functional traits of Pinus massoniana seedlings. Int J Biol Macromol 2024; 264:130762. [PMID: 38471608 DOI: 10.1016/j.ijbiomac.2024.130762] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Revised: 01/17/2024] [Accepted: 03/07/2024] [Indexed: 03/14/2024]
Abstract
Pinus massoniana needles, rich in medicinal polysaccharides and flavonoids, undergo heteroblastic foliage, transitioning from primary needles (PN) to secondary needles (SN) during growth, resulting in altered functional traits. Despite its significance, the molecular regulatory mechanisms governing these traits remain unclear. This study employs Iso-Seq and RNA-Seq analyses to explore differentially expressed genes (DEGs) associated with functional traits throughout the main growth season of heteroblastic foliage. Co-expression network analysis identified 34 hub genes and 17 key transcription factors (TFs) influencing light-harvesting antenna, photosystem I and II, crucial in photosynthesis regulation. Additionally, 14 genes involved in polysaccharide metabolism pathways, synthesizing sucrose, glucose, UDP sugars, and xylan, along with four genes in flavonoid biosynthesis pathways, regulating p-coumaroyl-CoA, quercetin, galangin, and myricetin production, exhibited differential expression between PN and SN. Further analysis unveils a highly interconnected network among these genes, forming a pivotal cascade of TFs and DEGs. Therefore, heteroblastic changes significantly impact needle functional traits, potentially affecting the pharmacological properties of PN and SN. Thus, these genomic insights into understanding the molecular-level differences of heteroblastic foliage, thereby establishing a foundation for advancements in the pharmaceutical industry related to needle-derived products.
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Affiliation(s)
- Haoyun Wang
- Institute for Forest Resources and Environment of Guizhou, Guizhou University, Guiyang 550025, China; Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou Province, Guizhou University, Guiyang 550025, China; College of Forestry, Guizhou University, Guiyang 550025, China
| | - Yuanxiang Zhao
- College of Forestry, Guizhou University, Guiyang 550025, China
| | - Jingjing Tu
- College of Forestry, Guizhou University, Guiyang 550025, China
| | - Daqu Liang
- College of Forestry, Guizhou University, Guiyang 550025, China
| | - Min Li
- College of Forestry, Guizhou University, Guiyang 550025, China
| | - Feng Wu
- Institute for Forest Resources and Environment of Guizhou, Guizhou University, Guiyang 550025, China; Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou Province, Guizhou University, Guiyang 550025, China; College of Forestry, Guizhou University, Guiyang 550025, China.
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Liu J, Ke M, Sun Y, Niu S, Zhang W, Li Y. Epigenetic regulation and epigenetic memory resetting during plant rejuvenation. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:733-745. [PMID: 37930766 DOI: 10.1093/jxb/erad435] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2023] [Accepted: 10/29/2023] [Indexed: 11/07/2023]
Abstract
Reversal of plant developmental status from the mature to the juvenile phase, thus leading to the restoration of the developmental potential, is referred to as plant rejuvenation. It involves multilayer regulation, including resetting gene expression patterns, chromatin remodeling, and histone modifications, eventually resulting in the restoration of juvenile characteristics. Although plants can be successfully rejuvenated using some forestry practices to restore juvenile morphology, physiology, and reproductive capabilities, studies on the epigenetic mechanisms underlying this process are in the nascent stage. This review provides an overview of the plant rejuvenation process and discusses the key epigenetic mechanisms involved in DNA methylation, histone modification, and chromatin remodeling in the process of rejuvenation, as well as the roles of small RNAs in this process. Additionally, we present new inquiries regarding the epigenetic regulation of plant rejuvenation, aiming to advance our understanding of rejuvenation in sexually and asexually propagated plants. Overall, we highlight the importance of epigenetic mechanisms in the regulation of plant rejuvenation, providing valuable insights into the complexity of this process.
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Affiliation(s)
- Jie Liu
- State Key Laboratory of Tree Genetics and Breeding, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, PR China
| | - Meng Ke
- State Key Laboratory of Tree Genetics and Breeding, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, PR China
| | - Yuhan Sun
- State Key Laboratory of Tree Genetics and Breeding, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, PR China
| | - Shihui Niu
- State Key Laboratory of Tree Genetics and Breeding, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, PR China
| | - Wenli Zhang
- State Key Laboratory for Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, No.1 Weigang, Nanjing, Jiangsu 210095, PR China
| | - Yun Li
- State Key Laboratory of Tree Genetics and Breeding, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, College of Biological Sciences and Technology, Beijing Forestry University, Beijing, PR China
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Hoshika Y, Cotrozzi L, Gavrichkova O, Nali C, Pellegrini E, Scartazza A, Paoletti E. Functional responses of two Mediterranean pine species in an ozone Free-Air Controlled Exposure (FACE) experiment. TREE PHYSIOLOGY 2023; 43:1548-1561. [PMID: 37209141 DOI: 10.1093/treephys/tpad068] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/23/2023] [Revised: 04/18/2023] [Accepted: 05/15/2023] [Indexed: 05/22/2023]
Abstract
Effects of the phytotoxic and widespread ozone (O3) pollution may be species specific, but knowledge on Mediterranean conifer responses to long-term realistic exposure is still limited. We examined responses regarding to photosynthesis, needle biochemical stress markers and carbon and nitrogen (N) isotopes of two Mediterranean pine species (Pinus halepensis Mill. and Pinus pinea L.). Seedlings were grown in a Free-Air Controlled Exposure experiment with three levels of O3 (ambient air, AA [38.7 p.p.b. as daily average]; 1.5 × AA and 2.0 × AA) during the growing season (May-October 2019). In P. halepensis, O3 caused a significant decrease in the photosynthetic rate, which was mainly due to a reduction of both stomatal and mesophyll diffusion conductance to CO2. Isotopic analyses indicated a cumulative or memory effect of O3 exposure on this species, as the negative effects were highlighted only in the late growing season in association with a reduced biochemical defense capacity. On the other hand, there was no clear effect of O3 on photosynthesis in P. pinea. However, this species showed enhanced N allocation to leaves to compensate for reduced photosynthetic N- use efficiency. We conclude that functional responses to O3 are different between the two species determining that P. halepensis with thin needles was relatively sensitive to O3, while P. pinea with thicker needles was more resistant due to a potentially low O3 load per unit mass of mesophyll cells, which may affect species-specific resilience in O3-polluted Mediterranean pine forests.
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Affiliation(s)
- Yasutomo Hoshika
- Institute of Research on Terrestrial Ecosystems (IRET), National Research Council of Italy (CNR), Firenze Unit, Via Madonna del Piano, Sesto Fiorentino I-50019, Italy
- Italian Integrated Environmental Research Infrastructures System (ITINERIS), Tito Scalo, Potenza 85050, Italy
- NBFC, National Biodiversity Future Center, Palermo 90133, Italy
| | - Lorenzo Cotrozzi
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa I-56124, Italy
- CIRSEC, Centre for Climate Change Impact, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy
| | - Olga Gavrichkova
- NBFC, National Biodiversity Future Center, Palermo 90133, Italy
- Institute of Research on Terrestrial Ecosystems (IRET), National Research Council of Italy (CNR), Headquarters Porano, Via G. Marconi 2, Porano 05010, Italy
| | - Cristina Nali
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa I-56124, Italy
- CIRSEC, Centre for Climate Change Impact, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy
| | - Elisa Pellegrini
- Department of Agriculture, Food and Environment, University of Pisa, Via del Borghetto 80, Pisa I-56124, Italy
- CIRSEC, Centre for Climate Change Impact, University of Pisa, Via del Borghetto 80, Pisa 56124, Italy
| | - Andrea Scartazza
- NBFC, National Biodiversity Future Center, Palermo 90133, Italy
- Institute of Research on Terrestrial Ecosystems (IRET), National Research Council of Italy (CNR), Pisa Unit, Via Moruzzi 1, Pisa 56124, Italy
| | - Elena Paoletti
- Institute of Research on Terrestrial Ecosystems (IRET), National Research Council of Italy (CNR), Firenze Unit, Via Madonna del Piano, Sesto Fiorentino I-50019, Italy
- Italian Integrated Environmental Research Infrastructures System (ITINERIS), Tito Scalo, Potenza 85050, Italy
- NBFC, National Biodiversity Future Center, Palermo 90133, Italy
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Rivera BK, Sáez PL, Cavieres LA, Capó-Bauçà S, Iñiguez C, Sanfuentes von Stowasser E, Fuentes F, Ramírez CF, Vallejos V, Galmés J. Anatomical and biochemical evolutionary ancient traits of Araucaria araucana (Molina) K. Koch and their effects on carbon assimilation. TREE PHYSIOLOGY 2022; 42:1957-1974. [PMID: 35604362 DOI: 10.1093/treephys/tpac057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/03/2021] [Accepted: 05/13/2022] [Indexed: 06/15/2023]
Abstract
The study of ancient species provides valuable information concerning the evolution of specific adaptations to past and current environmental conditions. Araucaria araucana (Molina) K. Koch belongs to one of the oldest families of conifers in the world, but despite this, there are few studies focused on its physiology and responses to changes in environmental conditions. We used an integrated approach aimed at comprehensively characterizing the ecophysiology of this poorly known species, focusing in its stomatal, mesophyll and biochemical traits, hypothesizing that these traits govern the carbon assimilation of A. araucana under past and present levels of atmospheric CO2. Results indicated that A. araucana presents the typical traits of an ancient species, such as large stomata and low stomatal density, which trigger low stomatal conductance and slow stomatal responsiveness to changing environmental conditions. Interestingly, the quantitative analysis showed that photosynthetic rates were equally limited by both diffusive and biochemical components. The Rubisco catalytic properties proved to have a low Rubisco affinity for CO2 and O2, similar to other ancient species. This affinity for CO2, together with the low carboxylation turnover rate, are responsible for the low Rubisco catalytic efficiency of carboxylation. These traits could be the result of the diverse environmental selective pressures that A. araucana was exposed during its diversification. The increase in measured temperatures induced an increase in stomatal and biochemical limitations, which together with a lower Rubisco affinity for CO2 could explain the low photosynthetic capacity of A. araucana in warmer conditions.
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Affiliation(s)
- Betsy K Rivera
- Laboratorio Cultivo de Tejidos Vegetales, Centro de Biotecnología, Departamento de Silvicultura, Facultad de Ciencias Forestales, Universidad de Concepción, Concepción 4030000, Chile
| | - Patricia L Sáez
- Laboratorio Cultivo de Tejidos Vegetales, Centro de Biotecnología, Departamento de Silvicultura, Facultad de Ciencias Forestales, Universidad de Concepción, Concepción 4030000, Chile
- Instituto de Ecología y Biodiversidad (IEB), Santiago 8320000, Chile
| | - Lohengrin A Cavieres
- Instituto de Ecología y Biodiversidad (IEB), Santiago 8320000, Chile
- ECOBIOSIS, Departamento de Botánica, Facultad de Ciencias Naturales y Oceanográficas, Universidad de Concepción, Concepción 4030000, Chile
| | - Sebastià Capó-Bauçà
- Research Group on Plant Biology under Mediterranean Conditions, INAGEA-Universitat de les Illes Balears, Balearic Islands 07122, Spain
| | - Concepción Iñiguez
- Research Group on Plant Biology under Mediterranean Conditions, INAGEA-Universitat de les Illes Balears, Balearic Islands 07122, Spain
| | - Eugenio Sanfuentes von Stowasser
- Laboratorio de Patología Forestal, Facultad Ciencias Forestales y Centro de Biotecnología, Universidad de Concepción, Concepción 4030000, Chile
| | - Francisca Fuentes
- Laboratorio Cultivo de Tejidos Vegetales, Centro de Biotecnología, Departamento de Silvicultura, Facultad de Ciencias Forestales, Universidad de Concepción, Concepción 4030000, Chile
| | - Constanza F Ramírez
- Laboratorio Cultivo de Tejidos Vegetales, Centro de Biotecnología, Departamento de Silvicultura, Facultad de Ciencias Forestales, Universidad de Concepción, Concepción 4030000, Chile
| | - Valentina Vallejos
- Laboratorio Cultivo de Tejidos Vegetales, Centro de Biotecnología, Departamento de Silvicultura, Facultad de Ciencias Forestales, Universidad de Concepción, Concepción 4030000, Chile
| | - Jeroni Galmés
- Research Group on Plant Biology under Mediterranean Conditions, INAGEA-Universitat de les Illes Balears, Balearic Islands 07122, Spain
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Wang J, Ouyang F, An S, Wang L, Xu N, Ma J, Wang J, Zhang H, Kong L. Variation, coordination, and trade-offs between needle structures and photosynthetic-related traits across five Picea species: consequences on plant growth. BMC PLANT BIOLOGY 2022; 22:242. [PMID: 35581540 PMCID: PMC9112436 DOI: 10.1186/s12870-022-03593-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/03/2021] [Accepted: 04/06/2022] [Indexed: 06/15/2023]
Abstract
BACKGROUND Picea species are distributed and planted world-wide due to their great ecological and economic values. It has been reported that Picea species vary widely in growth traits in a given environment, which reflects genetic and phenotypic differences among species. However, key physiological processes underlying tree growth and the influencing factors on them are still unknown. RESULTS Here, we examined needle structures, needle chemical components, physiological characteristics and growth traits across five Picea species in a common garden in Tianshui, Gansu province in China: Picea glauca, P. mariana, P. likiangensis, P. koraiensis, and P. crassifolia, among which P. glauca and P. mariana were introduced from North America, P. likiangensis was from Lijiang, Yunan province in China, P. koraiensis was from Yichun, Heilongjiang province in China, and P. crassifolia was native to the experimental site. It was found that nearly all traits varied significantly among species. Tissue-level anatomical characteristics and leaf mass per area (LMA) were affected by needle size, but the variations of them were not associated with the variations in photosynthetic and biochemical capacity among species. Variations in area-based maximum photosynthesis (Pnmax) were affected by stomatal conductance (gs), mesophyll conductance (gm) and biochemical parameters including maximum carboxylation rate (Vcmax), and maximum electron transport rate (Jmax). The fraction of N allocated to different photosynthetic apparatus displayed contrasting values among species, which contributed to the species variations in photosynthetic nitrogen use efficiency (PNUE) and Pnmax. Additionally, all growth traits were positively correlated with Pnmax and PNUE. CONCLUSION Needle structures are less important than needle biochemical parameters in determining the variations in photosynthetic capacity across the five Picea species. Pnmax and PNUE are closedly associated with the fraction of N allocated to photosynthetic apparatus (Pphoto) compared with leaf N content per area (Narea). The tremendous growth differences among the five Picea species were substantially related to the interspecies variation in Pnmax and PNUE.
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Affiliation(s)
- Junchen Wang
- State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, 100091, People's Republic of China
| | - Fangqun Ouyang
- Beijing Floriculture Engineering Technology Research Centre, Beijing Laboratory of Urban and Rural Ecological Environment, Beijing Botanical Garden, Beijing, 100093, China.
| | - Sanping An
- Research Institute of Forestry of Xiaolong Mountain, Gansu Provincial Key Laboratory of Secondary Forest Cultivation, Tianshui, 741022, People's Republic of China
| | - Lifang Wang
- Research Institute of Forestry of Xiaolong Mountain, Gansu Provincial Key Laboratory of Secondary Forest Cultivation, Tianshui, 741022, People's Republic of China
| | - Na Xu
- Research Institute of Forestry of Xiaolong Mountain, Gansu Provincial Key Laboratory of Secondary Forest Cultivation, Tianshui, 741022, People's Republic of China
| | - Jianwei Ma
- Research Institute of Forestry of Xiaolong Mountain, Gansu Provincial Key Laboratory of Secondary Forest Cultivation, Tianshui, 741022, People's Republic of China
| | - Junhui Wang
- State Key Laboratory of Tree Genetics and Breeding, Key Laboratory of Tree Breeding and Cultivation of State Forestry Administration, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, 100091, People's Republic of China.
| | - Hanguo Zhang
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin, 150040, People's Republic of China
| | - Lisheng Kong
- Department of Biology, Centre for Forest Biology, University of Victoria, Victoria, BC, V8W 2Y2, Canada
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Experimental Approach Alters N and P Addition Effects on Leaf Traits and Growth Rate of Subtropical Schima superba (Reinw. ex Blume) Seedlings. FORESTS 2022. [DOI: 10.3390/f13020141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/01/2023]
Abstract
Nitrogen (N) and/or phosphorus (P) addition has controversial effects on tree functional traits and growth; however, this experimental approach may clarify these controversial results. In this study, field and pot experiments were designed with +N (100 kg N ha−1 yr−1), +P (50 kg P ha−1 yr−1), +NP (100 kg N plus 50 kg P ha−1 yr−1), and a control (no N or P addition) to comparatively investigate the effects of N and P addition on 24 leaf traits and the growth rate of Schima superba (Reinw. ex Blume ) seedlings in subtropical China. We found that the experimental approach alters N and P addition effects on leaf traits and tree growth. Nitrogen addition strongly altered leaf biochemical and physiological traits and limited tree growth compared to P addition in the pot experiment, while the effects of N and P addition on leaf traits and tree growth were weaker in the field, since the seedlings might be mainly limited by light availability rather than nutrient supplies. The inference from the pot experiment might amplify the impact of N deposition on forest plants in complicated natural systems. These findings will help guide refining pot fertilization experiments to simulate trees in the field under environmental change. Future directions should consider reducing the confounding effects of biotic and abiotic factors on fertilization in the field, and refinement of the control seedlings’ genetic diversity, mycorrhizal symbiont, and root competition for long-term fertilization experiments are required.
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Wang H, Wu F, Li M, Zhu X, Shi C, Shao C, Ding G. Structure and chlorophyll fluorescence of heteroblastic foliage affect first-year growth in Pinus massoniana Lamb. seedlings. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2022; 170:206-217. [PMID: 34906903 DOI: 10.1016/j.plaphy.2021.12.006] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2021] [Revised: 11/22/2021] [Accepted: 12/07/2021] [Indexed: 06/14/2023]
Abstract
Pine seedlings exhibit heteroblastic foliage (primary and secondary needles) during seedling development. However, few trials have studied how heteroblastic foliage influences pine seedling growth by seasonal variation. This study first investigated the anatomical differences between the primary and secondary needles of one-year-old Pinus massoniana seedlings. We measured chlorophyll fluorescence (ChlF) and evaluated the photoprotective mechanisms and light energy partitioning of these heteroblastic leaves from September to November. The results showed that the primary needles, as juvenile foliage, had a greater fraction of mesophyll tissue and stomata. In addition, the primary needles had two vascular bundles, and shorter distance from xylem and phloem to mesophyll cells, exhibiting a luxury growth strategy of rapidly obtaining high returns. The ChlF parameters indicated that the primary needles maintained a relatively high level of photoprotection by thermal dissipation (nonphotochemical quenching (NPQ)) and nonregulated energy dissipation (Y(NO)). The secondary needles, representing mature foliage, had greater area of xylem and phloem tissues. The contents of Chl b and carotenoids (Car) significantly increased in November, promoting φPo and photoprotection, which suggested that the secondary needles were more resistant to low temperatures. During the whole light response process of secondary needles, the increases in the electron transfer rate (ETR) and light energy utilization efficiency (α) helped to increase the actual photosynthetic quantum yield (Y(II)) by reducing energy dissipation by decreasing the proportion of regulated energy dissipation (Y(NPQ)) and Y(NO). Given the sensitivity of this heteroblastic foliage to environmental changes, the practical use and extension of P. massoniana for afforestation purposes should be carried out with caution.
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Affiliation(s)
- Haoyun Wang
- Institute for Forest Resources and Environment of Guizhou, Guizhou University, Guiyang, 550025, China; Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou Province, Guizhou University, Guiyang, 550025, China; College of Forestry, Guizhou University, Guiyang, 550025, China
| | - Feng Wu
- Institute for Forest Resources and Environment of Guizhou, Guizhou University, Guiyang, 550025, China; Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou Province, Guizhou University, Guiyang, 550025, China; College of Forestry, Guizhou University, Guiyang, 550025, China.
| | - Min Li
- College of Forestry, Guizhou University, Guiyang, 550025, China
| | - Xiaokun Zhu
- College of Forestry, Guizhou University, Guiyang, 550025, China
| | - Changshuang Shi
- College of Forestry, Guizhou University, Guiyang, 550025, China
| | - Changchang Shao
- College of Forestry, Guizhou University, Guiyang, 550025, China
| | - Guijie Ding
- Institute for Forest Resources and Environment of Guizhou, Guizhou University, Guiyang, 550025, China; Key Laboratory of Forest Cultivation in Plateau Mountain of Guizhou Province, Guizhou University, Guiyang, 550025, China; College of Forestry, Guizhou University, Guiyang, 550025, China.
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Roig-Oliver M, Bresta P, Nikolopoulos D, Bota J, Flexas J. Dynamic changes in cell wall composition of mature sunflower leaves under distinct water regimes affect photosynthesis. JOURNAL OF EXPERIMENTAL BOTANY 2021; 72:7863-7875. [PMID: 34379761 DOI: 10.1093/jxb/erab372] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/10/2021] [Accepted: 08/09/2021] [Indexed: 06/13/2023]
Abstract
In previous work, we identified that exposure to limited water availability induced changes in cell wall composition of mature Helianthus annuus L. leaves that affected mesophyll conductance to CO2 diffusion (gm). However, it is unclear on which timescale these changes in cell wall composition occurred. Here, we subjected H. annuus to control (i.e. water availability), different levels of short-term water deficit stress (ST), long-term water deficit stress (LT), and long-term water deficit stress followed by gradual recoveries addressed at different timescales (LT-Rec) to evaluate the dynamics of modifications in the main composition of cell wall (cellulose, hemicelluloses, pectins and lignins) affecting photosynthesis. During gradual ST treatments, pectins enhancement was associated with gm decline. However, during LT-Rec, pectins content decreased significantly after only 5 h, while hemicelluloses and lignins amounts changed after 24 h, all being uncoupled from gm. Surprisingly, lignins increased by around 200% compared with control and were related to stomatal conductance to gas diffusion (gs) during LT-Rec. Although we suspect that the accuracy of the protocols to determine cell wall composition should be re-evaluated, we demonstrate for the first time that a highly dynamic cell wall composition turnover differently affects photosynthesis in plants subjected to distinct water regimes.
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Affiliation(s)
- Margalida Roig-Oliver
- Research Group on Plant Biology under Mediterranean Conditions, Departament de Biologia, Universitat de les Illes Balears (UIB), INAGEA. Carretera de Valldemossa Km 7.5, 07122 Palma de Mallorca, Illes Balears, Spain
| | - Panagiota Bresta
- Laboratory of Electron Microscopy, Department of Crop Science, Agricultural University of Athens (AUA), Iera Odos 75, Botanikos, 11855 Athens, Greece
| | - Dimosthenis Nikolopoulos
- Laboratory of Plant Physiology and Morphology, Department of Crop Science, Agricultural University of Athens (AUA), Iera Odos 75, Botanikos, 11855 Athens, Greece
| | - Josefina Bota
- Research Group on Plant Biology under Mediterranean Conditions, Departament de Biologia, Universitat de les Illes Balears (UIB), INAGEA. Carretera de Valldemossa Km 7.5, 07122 Palma de Mallorca, Illes Balears, Spain
| | - Jaume Flexas
- Research Group on Plant Biology under Mediterranean Conditions, Departament de Biologia, Universitat de les Illes Balears (UIB), INAGEA. Carretera de Valldemossa Km 7.5, 07122 Palma de Mallorca, Illes Balears, Spain
- King Abdulaziz University, Jeddah, Saudi Arabia
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Guo X, Shi P, Niinemets Ü, Hölscher D, Wang R, Liu M, Li Y, Dong L, Niklas KJ. "Diminishing returns" for leaves of five age-groups of Phyllostachys edulis culms. AMERICAN JOURNAL OF BOTANY 2021; 108:1662-1672. [PMID: 34580863 DOI: 10.1002/ajb2.1738] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/07/2021] [Revised: 05/17/2021] [Accepted: 05/17/2021] [Indexed: 05/12/2023]
Abstract
PREMISE Leaf mass (M) and lamina surface area (A) are important functional traits reported to obey a scaling relationship called "diminishing returns" (i.e., M ∝ Aα>1 ). Previous studies have focused primarily on eudicots and ignored whether the age of leaves affects the numerical value of the scaling exponent (i.e., α). METHODS The effect of age was examined using 1623 Phyllostachys edulis leaves from culms differing in age collected in Nanjing, China. The scaling relationships among leaf A, fresh mass (FM), and dry mass (DM) were evaluated using reduced major axis protocols. The bootstrap percentile method was used to test the significance of differences in α-values. RESULTS Overall, the numerical values of α exceeded 1.0. The scaling relationship between FM and A was statistically more robust than that between DM and A. The scaling exponents of FM vs. A exhibited a "high-low-high-low-high" numerical trend from the oldest to the youngest age-group. FM increased linearly as culm age decreased; the leaf DM per unit area (LMA) exhibited a parabolic trend across the age-groups. CONCLUSIONS "Diminishing returns" is confirmed for all but one age-group of an important monocot species. The relationship between FM and A was statistically more robust than that between DM and A for each age-group. The FM per unit A decreased with increasing age-groups, whereas the middle age-groups had a greater LMA than the oldest and youngest age-groups. These data are the first to show that the age of shoots affects the scaling relationship between leaf mass and area.
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Affiliation(s)
- Xuchen Guo
- Bamboo Research Institute, College of Biology and the Environment, Nanjing Forestry University, 159 Longpan Rd., Nanjing, 210037, China
| | - Peijian Shi
- Bamboo Research Institute, College of Biology and the Environment, Nanjing Forestry University, 159 Longpan Rd., Nanjing, 210037, China
- Tropical Silviculture and Forest Ecology, University of Göttingen, Büsgenweg 1, 37077, Göttingen, Germany
| | - Ülo Niinemets
- Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Tartu, 51006, Estonia
- Estonian Academy of Sciences, Tallinn, 10130, Estonia
| | - Dirk Hölscher
- Tropical Silviculture and Forest Ecology, University of Göttingen, Büsgenweg 1, 37077, Göttingen, Germany
| | - Rong Wang
- Bamboo Research Institute, College of Biology and the Environment, Nanjing Forestry University, 159 Longpan Rd., Nanjing, 210037, China
| | - Mengdi Liu
- Bamboo Research Institute, College of Biology and the Environment, Nanjing Forestry University, 159 Longpan Rd., Nanjing, 210037, China
| | - Yirong Li
- Bamboo Research Institute, College of Biology and the Environment, Nanjing Forestry University, 159 Longpan Rd., Nanjing, 210037, China
| | - Lina Dong
- Administrative Bureau of Dr. Sun Yat-sen's Mausoleum, Nanjing, 210014, China
| | - Karl J Niklas
- School of Integrative Plant Science, Cornell University, Ithaca, NY, 14853, USA
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10
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Lawrence EH, Springer CJ, Helliker BR, Scott Poethig R. MicroRNA156-mediated changes in leaf composition lead to altered photosynthetic traits during vegetative phase change. THE NEW PHYTOLOGIST 2021; 231:1008-1022. [PMID: 33064860 PMCID: PMC8299463 DOI: 10.1111/nph.17007] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/22/2020] [Accepted: 10/06/2020] [Indexed: 05/09/2023]
Abstract
Plant morphology and physiology change with growth and development. Some of these changes are due to change in plant size and some are the result of genetically programmed developmental transitions. In this study we investigate the role of the developmental transition, vegetative phase change (VPC), on morphological and photosynthetic changes. We used overexpression of microRNA156, the master regulator of VPC, to modulate the timing of VPC in Populus tremula × alba, Zea mays, and Arabidopsis thaliana to determine its role in trait variation independent of changes in size and overall age. Here, we find that juvenile and adult leaves in all three species photosynthesize at different rates and that these differences are due to phase-dependent changes in specific leaf area (SLA) and leaf N but not photosynthetic biochemistry. Further, we found juvenile leaves with high SLA were associated with better photosynthetic performance at low light levels. This study establishes a role for VPC in leaf composition and photosynthetic performance across diverse species and environments. Variation in leaf traits due to VPC are likely to provide distinct benefits under specific environments; as a result, selection on the timing of this transition could be a mechanism for environmental adaptation.
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Affiliation(s)
- Erica H. Lawrence
- Department of Biology, University of Pennsylvania, 433 South University Avenue, Philadelphia, PA 19104, USA
| | - Clint J. Springer
- Department of Biology, Saint Joseph’s University, 5600 City Avenue, Philadelphia, PA 19131, USA
| | - Brent R. Helliker
- Department of Biology, University of Pennsylvania, 433 South University Avenue, Philadelphia, PA 19104, USA
| | - R. Scott Poethig
- Department of Biology, University of Pennsylvania, 433 South University Avenue, Philadelphia, PA 19104, USA
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11
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Roig-Oliver M, Bresta P, Nadal M, Liakopoulos G, Nikolopoulos D, Karabourniotis G, Bota J, Flexas J. Cell wall composition and thickness affect mesophyll conductance to CO2 diffusion in Helianthus annuus under water deprivation. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:7198-7209. [PMID: 32905592 DOI: 10.1093/jxb/eraa413] [Citation(s) in RCA: 23] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2020] [Accepted: 09/06/2020] [Indexed: 06/11/2023]
Abstract
Water deprivation affects photosynthesis, leaf anatomy, and cell wall composition. Although the former effects have been widely studied, little is known regarding those changes in cell wall major (cellulose, hemicelluloses, pectin, and lignin) and minor (cell wall-bound phenolics) compounds in plants acclimated to short- and long-term water deprivation and during recovery. In particular, how these cell wall changes impact anatomy and/or photosynthesis, specifically mesophyll conductance to CO2 diffusion (gm), has been scarcely studied. To induce changes in photosynthesis, cell wall composition and anatomy, Helianthus annuus plants were studied under five conditions: (i) control (i.e. without stress) (CL); (ii) long-term water deficit stress (LT); (iii) long-term water deficit stress with recovery (LT-Rec); (iv) short-term water deficit stress (ST); and (v) short-term water deficit stress with recovery (ST-Rec), resulting in a wide photosynthetic range (from 3.80 ± 1.05 μmol CO2 m-2 s-1 to 24.53 ± 0.42 μmol CO2 m-2 s-1). Short- and long-term water deprivation and recovery induced distinctive responses of the examined traits, evidencing a cell wall dynamic turnover during plants acclimation to each condition. In particular, we demonstrated for the first time how gm correlated negatively with lignin and cell wall-bound phenolics and how the (cellulose+hemicelloses)/pectin ratio was linked to cell wall thickness (Tcw) variations.
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Affiliation(s)
- Margalida Roig-Oliver
- Research Group on Plant Biology under Mediterranean Conditions, Departament de Biologia, Universitat de les Illes Balears (UIB), INAGEA, Carretera de Valldemossa Km 7.5, 07122 Palma de Mallorca, Illes Balears, Spain
| | - Panagiota Bresta
- Laboratory of Plant Physiology and Morphology, Department of Crop Science, Agricultural University of Athens (AUA), Iera Odos 75, Botanikos, Athens, Greece
| | - Miquel Nadal
- Research Group on Plant Biology under Mediterranean Conditions, Departament de Biologia, Universitat de les Illes Balears (UIB), INAGEA, Carretera de Valldemossa Km 7.5, 07122 Palma de Mallorca, Illes Balears, Spain
| | - Georgios Liakopoulos
- Laboratory of Plant Physiology and Morphology, Department of Crop Science, Agricultural University of Athens (AUA), Iera Odos 75, Botanikos, Athens, Greece
| | - Dimosthenis Nikolopoulos
- Laboratory of Plant Physiology and Morphology, Department of Crop Science, Agricultural University of Athens (AUA), Iera Odos 75, Botanikos, Athens, Greece
| | - George Karabourniotis
- Laboratory of Plant Physiology and Morphology, Department of Crop Science, Agricultural University of Athens (AUA), Iera Odos 75, Botanikos, Athens, Greece
| | - Josefina Bota
- Research Group on Plant Biology under Mediterranean Conditions, Departament de Biologia, Universitat de les Illes Balears (UIB), INAGEA, Carretera de Valldemossa Km 7.5, 07122 Palma de Mallorca, Illes Balears, Spain
| | - Jaume Flexas
- Research Group on Plant Biology under Mediterranean Conditions, Departament de Biologia, Universitat de les Illes Balears (UIB), INAGEA, Carretera de Valldemossa Km 7.5, 07122 Palma de Mallorca, Illes Balears, Spain
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12
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Zhang Z, Sun Y, Li Y. Plant rejuvenation: from phenotypes to mechanisms. PLANT CELL REPORTS 2020; 39:1249-1262. [PMID: 32780162 DOI: 10.1007/s00299-020-02577-1] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Revised: 07/28/2020] [Accepted: 08/01/2020] [Indexed: 06/11/2023]
Abstract
Plant rejuvenation refers to the reversal of the adult phase in plants and the recovery of part or all of juvenile plant characteristics. The growth and reproductive vitality of plants can be increased after rejuvenation. In recent years, research has successfully reversed the development clock in plants by certain methods; created rejuvenated plants and revealed the basic rules of plant morphology, physiology and reproduction. Here, we reconstitute the changes at the morphological and macromolecular levels, including those in RNA, phytohormones and DNA, during plant rejuvenation. In addition, the characteristics of plant phase changes that can be used as references for plant rejuvenation are also summarized. We further propose possible mechanisms for plant rejuvenation, methods for reversing plant development and problems that should be avoided. Overall, this study highlights the physiological and molecular events involved in plant rejuvenation.
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Affiliation(s)
- Zijie Zhang
- Beijing Advanced Innovation Center for Tree Breeding By Molecular Design, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, National Engineering Laboratory For Tree Breeding, College of Biological Science and Technology, Beijing Forestry University, Beijing, 100083, People's Republic of China
| | - Yuhan Sun
- Beijing Advanced Innovation Center for Tree Breeding By Molecular Design, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, National Engineering Laboratory For Tree Breeding, College of Biological Science and Technology, Beijing Forestry University, Beijing, 100083, People's Republic of China
| | - Yun Li
- Beijing Advanced Innovation Center for Tree Breeding By Molecular Design, Engineering Technology Research Center of Black Locust of National Forestry and Grassland Administration, National Engineering Laboratory For Tree Breeding, College of Biological Science and Technology, Beijing Forestry University, Beijing, 100083, People's Republic of China.
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13
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Veromann-Jürgenson LL, Brodribb TJ, Niinemets Ü, Tosens T. Variability in the chloroplast area lining the intercellular airspace and cell walls drives mesophyll conductance in gymnosperms. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:4958-4971. [PMID: 32392579 DOI: 10.1093/jxb/eraa231] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/29/2020] [Accepted: 05/05/2020] [Indexed: 06/11/2023]
Abstract
The photosynthetic efficiency of plants in different environments is controlled by stomata, hydraulics, biochemistry, and mesophyll conductance (gm). Recently, gm was demonstrated to be the key limitation of photosynthesis in gymnosperms. Values of gm across gymnosperms varied over 20-fold, but this variation was poorly explained by robust structure-bound integrated traits such as leaf dry mass per area. Understanding how the component structural traits control gm is central for identifying the determinants of variability in gm across plant functional and phylogenetic groups. Here, we investigated the structural traits responsible for gm in 65 diverse gymnosperms. Although the integrated morphological traits, shape, and anatomical characteristics varied widely across species, the distinguishing features of all gymnosperms were thick mesophyll cell walls and low chloroplast area exposed to intercellular airspace (Sc/S) compared with angiosperms. Sc/S and cell wall thickness were the fundamental traits driving variations in gm across gymnosperm species. Chloroplast thickness was the strongest limitation of gm among liquid-phase components. The variation in leaf dry mass per area was not correlated with the key ultrastructural traits determining gm. Thus, given the absence of correlating integrated easy-to-measure traits, detailed knowledge of underlying component traits controlling gm across plant taxa is necessary to understand the photosynthetic limitations across ecosystems.
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Affiliation(s)
| | - Timothy J Brodribb
- School of Natural Sciences, University of Tasmania, Hobart, Tasmania, Australia
| | - Ülo Niinemets
- Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Tartu, Estonia
- Estonian Academy of Sciences, Tallinn, Estonia
| | - Tiina Tosens
- Institute of Agricultural and Environmental Sciences, Estonian University of Life Sciences, Tartu, Estonia
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14
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Carriquí M, Nadal M, Clemente-Moreno MJ, Gago J, Miedes E, Flexas J. Cell wall composition strongly influences mesophyll conductance in gymnosperms. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2020; 103:1372-1385. [PMID: 32390169 DOI: 10.1111/tpj.14806] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/23/2020] [Revised: 04/22/2020] [Accepted: 04/28/2020] [Indexed: 06/11/2023]
Abstract
Cell wall thickness is widely recognized as one of the main determinants of mesophyll conductance to CO2 (gm ). However, little is known about the components that regulate effective CO2 diffusivity in the cell wall (i.e. the ratio between actual porosity and tortuosity, the other two biophysical diffusion properties of cell walls). The aim of this study was to assess, at the interspecific level, potential relationships between cell wall composition, cell wall thickness (Tcw ) and gm . Gymnosperms constitute an ideal group to deepen these relationships, as they present, on average, the thickest cell walls within spermatophytes. We characterized the foliar gas exchange, the morphoanatomical traits related with gm , the leaf fraction constituted by cell walls and three main components of primary cell walls (hemicelluloses, cellulose and pectins) in seven gymnosperm species. We found that, although the relatively low gm of gymnosperms was mainly determined by their elevated Tcw , gm was also strongly correlated with cell wall composition, which presumably sets the final effective CO2 diffusivity. The data presented here suggest that (i) differences in gm are strongly correlated to the pectins to hemicelluloses and cellulose ratio in gymnosperms, and (ii) variations in cell wall composition may modify effective CO2 diffusivity in the cell wall to compensate the negative impact of thickened walls. We speculate that higher relative pectin content allows higher gm because pectins increase cell wall hydrophilicity and CO2 molecules cross the wall dissolved in water.
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Affiliation(s)
- Marc Carriquí
- Research Group in Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears (UIB) - Agro-Environmental and Water Economics Institute (INAGEA), Palma, Illes Balears, 07122, Spain
- School of Natural Sciences, University of Tasmania (UTAS), Bag 55, Hobart, Tasmania, 7001, Australia
| | - Miquel Nadal
- Research Group in Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears (UIB) - Agro-Environmental and Water Economics Institute (INAGEA), Palma, Illes Balears, 07122, Spain
| | - María J Clemente-Moreno
- Research Group in Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears (UIB) - Agro-Environmental and Water Economics Institute (INAGEA), Palma, Illes Balears, 07122, Spain
| | - Jorge Gago
- Research Group in Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears (UIB) - Agro-Environmental and Water Economics Institute (INAGEA), Palma, Illes Balears, 07122, Spain
| | - Eva Miedes
- Centro de Biotecnología y Genómica de Plantas, Universidad Politécnica de Madrid (UPM), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Campus Montegancedo UPM, Pozuelo de Alarcón, Madrid, 28223, Spain
- Departamento de Biotecnología-Biología Vegetal, Escuela Técnica Superior de Ingeniería Agronómica, Alimentaria y de Biosistemas, Madrid, 28040, Spain
| | - Jaume Flexas
- Research Group in Plant Biology under Mediterranean Conditions, Universitat de les Illes Balears (UIB) - Agro-Environmental and Water Economics Institute (INAGEA), Palma, Illes Balears, 07122, Spain
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15
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Liu Z, Hikosaka K, Li F, Jin G. Variations in leaf economics spectrum traits for an evergreen coniferous species: Tree size dominates over environment factors. Funct Ecol 2020. [DOI: 10.1111/1365-2435.13498] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Zhili Liu
- Center for Ecological Research Northeast Forestry University Harbin China
- Key Laboratory of Sustainable Forest Ecosystem Management‐Ministry of Education Northeast Forestry University Harbin China
| | - Kouki Hikosaka
- Graduate School of Life Sciences Tohoku University Sendai Miyagi Japan
| | - Fengri Li
- Key Laboratory of Sustainable Forest Ecosystem Management‐Ministry of Education Northeast Forestry University Harbin China
- School of Forestry Northeast Forestry University Harbin China
| | - Guangze Jin
- Center for Ecological Research Northeast Forestry University Harbin China
- Key Laboratory of Sustainable Forest Ecosystem Management‐Ministry of Education Northeast Forestry University Harbin China
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16
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Wang N, Palmroth S, Maier CA, Domec JC, Oren R. Anatomical changes with needle length are correlated with leaf structural and physiological traits across five Pinus species. PLANT, CELL & ENVIRONMENT 2019; 42:1690-1704. [PMID: 30684950 DOI: 10.1111/pce.13516] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2018] [Revised: 12/22/2018] [Accepted: 12/27/2018] [Indexed: 06/09/2023]
Abstract
The genus Pinus has wide geographical range and includes species that are the most economically valued among forest trees worldwide. Pine needle length varies greatly among species, but the effects of needle length on anatomy, function, and coordination and trade-offs among traits are poorly understood. We examined variation in leaf morphological, anatomical, mechanical, chemical, and physiological characteristics among five southern pine species: Pinus echinata, Pinus elliottii, Pinus palustris, Pinus taeda, and Pinus virginiana. We found that increasing needle length contributed to a trade-off between the relative fractions of support versus photosynthetic tissue (mesophyll) across species. From the shortest (7 cm) to the longest (36 cm) needles, mechanical tissue fraction increased by 50%, whereas needle dry density decreased by 21%, revealing multiple adjustments to a greater need for mechanical support in longer needles. We also found a fourfold increase in leaf hydraulic conductance over the range of needle length across species, associated with weaker upward trends in stomatal conductance and photosynthetic capacity. Our results suggest that the leaf size strongly influences their anatomical traits, which, in turn, are reflected in leaf mechanical support and physiological capacity.
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Affiliation(s)
- Na Wang
- School of Forestry, Northeast Forestry University, Harbin, 150040, China
- Nicholas School of the Environment, Duke University, Durham, NC, 27708, USA
| | - Sari Palmroth
- Nicholas School of the Environment, Duke University, Durham, NC, 27708, USA
| | | | - Jean-Christophe Domec
- Nicholas School of the Environment, Duke University, Durham, NC, 27708, USA
- Bordeaux Sciences Agro, UMR 1391 INRA-ISPA, 33175 Gradignan Cedex, France
| | - Ram Oren
- Nicholas School of the Environment, Duke University, Durham, NC, 27708, USA
- Department of Forest Sciences, University of Helsinki, Helsinki, Finland
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17
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Park M, Cho S, Park J, Lee H, Song W, Park IK, Kim HS. Size-dependent variation in leaf functional traits and nitrogen allocation trade-offs in Robinia pseudoacacia and Cornus controversa. TREE PHYSIOLOGY 2019; 39:755-766. [PMID: 30924868 DOI: 10.1093/treephys/tpy150] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/18/2018] [Revised: 11/24/2018] [Accepted: 12/22/2018] [Indexed: 06/09/2023]
Abstract
Tree species vary in how they invest resources to different functions throughout their life histories, and investigating the detailed patterns of ontogenetic changes in key functional traits will aid in predicting forest dynamics and ecosystem processes. In this context, we investigated size-dependent changes in key leaf functional traits and nitrogen (N) allocation trade-offs in black locust (Robinia pseudoacacia L., an N-fixing pioneer species) and giant dogwood (Cornus controversa Hemsl., a mid-successional species), which have different life-history strategies, especially in their light use. We found that the leaf mass per area and leaf carbon concentrations increased linearly with tree size (diameter at breast height, DBH), whereas leaf N concentrations decreased nonlinearly, with U- and hump-shaped patterns in black locust and giant dogwood, respectively. We also discovered large differences in N allocation between the two species. The fraction of leaf N invested in cell walls was much higher in black locust than in giant dogwood, while the opposite was true for the light harvesting N fraction. Furthermore, these fractions were related to DBH to varying degrees: the cell wall N fraction increased with DBH for both species, whereas the light harvesting N fraction of giant dogwood decreased nonlinearly and that of black locust remained constant. Instead, black locust reduced the fraction of leaf N invested in other N pools, resulting in a smaller fraction compared to that of giant dogwood. On the other hand, both species had similar fraction of leaf N invested in ribulose-1,5-bisphosphate carboxylase/oxygenase across tree size. This study indicated that both species increased leaf mechanical toughness through characteristic changes in N allocation trade-offs over the lifetimes of the trees.
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Affiliation(s)
- Minjee Park
- Department of Forest Sciences, Seoul National University, Seoul, Republic of Korea
| | - Sungsik Cho
- Interdisciplinary Program in Agricultural and Forest Meteorology, Seoul National University, Seoul, Republic of Korea
- National Center for Agro Meteorology, Seoul, Republic of Korea
| | - Juhan Park
- Department of Forest Sciences, Seoul National University, Seoul, Republic of Korea
- National Center for Agro Meteorology, Seoul, Republic of Korea
| | - HoonTaek Lee
- Department of Forest Sciences, Seoul National University, Seoul, Republic of Korea
| | - Wookyung Song
- Department of Forest Sciences, Seoul National University, Seoul, Republic of Korea
| | - Il-Kwon Park
- Department of Forest Sciences, Seoul National University, Seoul, Republic of Korea
- Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea
| | - Hyun Seok Kim
- Department of Forest Sciences, Seoul National University, Seoul, Republic of Korea
- Interdisciplinary Program in Agricultural and Forest Meteorology, Seoul National University, Seoul, Republic of Korea
- National Center for Agro Meteorology, Seoul, Republic of Korea
- Research Institute for Agriculture and Life Sciences, Seoul National University, Seoul, Republic of Korea
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18
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Gimeno TE, Saavedra N, Ogée J, Medlyn BE, Wingate L. A novel optimization approach incorporating non-stomatal limitations predicts stomatal behaviour in species from six plant functional types. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:1639-1651. [PMID: 30715494 PMCID: PMC6411372 DOI: 10.1093/jxb/erz020] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/17/2018] [Accepted: 01/14/2019] [Indexed: 05/23/2023]
Abstract
The primary function of stomata is to minimize plant water loss while maintaining CO2 assimilation. Stomatal water loss incurs an indirect cost to photosynthesis in the form of non-stomatal limitations (NSL) via reduced carboxylation capacity (CAP) and/or mesophyll conductance (MES). Two optimal formulations for stomatal conductance (gs) arise from the assumption of each type of NSL. In reality, both NSL could coexist, but one may prevail for a given leaf ontogenetic stage or plant functional type, depending on leaf morphology. We tested the suitability of two gs formulations (CAP versus MES) on species from six plant functional types (C4 crop, C3 grass, fern, conifer, evergreen, and deciduous angiosperm trees). MES and CAP parameters (the latter proportional to the marginal water cost to carbon gain) decreased with water availability only in deciduous angiosperm trees, while there were no clear differences between leaf ontogenetic stages. Both CAP and MES formulations fit our data in most cases, particularly under low water availability. For ferns, stomata appeared to operate optimally only when subjected to water stress. Overall, the CAP formulation provided a better fit across all species, suggesting that sub-daily stomatal responses minimize NSL by reducing carboxylation capacity predominantly, regardless of leaf morphology and ontogenetic stage.
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Affiliation(s)
- Teresa E Gimeno
- INRA, UMR ISPA, Villenave d’Ornon, France
- Basque Centre for Climate Change (BC3), Leioa, Spain
- IKERBASQUE, Basque Foundation for Science, Bilbao, Spain
| | - Noelia Saavedra
- INRA, UMR ISPA, Villenave d’Ornon, France
- Department of Forest Ecology and Management, Swedish University of Agricultural Sciences, Umeå, Sweden
| | | | - Belinda E Medlyn
- Hawkesbury Institute for the Environment, Western Sydney University, Penrith, NSW, Australia
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19
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Ye G, Zhang H, Chen B, Nie S, Liu H, Gao W, Wang H, Gao Y, Gu L. De novo genome assembly of the stress tolerant forest species Casuarina equisetifolia provides insight into secondary growth. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2019; 97:779-794. [PMID: 30427081 DOI: 10.1111/tpj.14159] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2018] [Revised: 11/07/2018] [Accepted: 11/09/2018] [Indexed: 05/18/2023]
Abstract
Casuarina equisetifolia (C. equisetifolia), a conifer-like angiosperm with resistance to typhoon and stress tolerance, is mainly cultivated in the coastal areas of Australasia. C. equisetifolia, making it a valuable model to study secondary growth associated genes and stress-tolerance traits. However, the genome sequence is unavailable and therefore wood-associated growth rate and stress resistance at the molecular level is largely unexplored. We therefore constructed a high-quality draft genome sequence of C. equisetifolia by a combination of Illumina second-generation sequencing reads and Pacific Biosciences single-molecule real-time (SMRT) long reads to advance the investigation of this species. Here, we report the genome assembly, which contains approximately 300 megabases (Mb) and scaffold size of N50 is 1.06 Mb. Additionally, gene annotation, assisted by a combination of prediction and RNA-seq data, generated 29 827 annotated protein-coding genes and 1983 non-coding genes, respectively. Furthermore, we found that the total number of repetitive sequences account for one-third of the genome assembly. Here we also construct the genome-wide map of DNA modification, such as two novel forms N6 -adenine (6mA) and N4-methylcytosine (4mC) at the level of single-nucleotide resolution using single-molecule real-time (SMRT) sequencing. Interestingly, we found that 17% of 6mA modification genes and 15% of 4mC modification genes also included alternative splicing events. Finally, we investigated cellulose, hemicellulose, and lignin-related genes, which were associated with secondary growth and contained different DNA modifications. The high-quality genome sequence and annotation of C. equisetifolia in this study provide a valuable resource to strengthen our understanding of the diverse traits of trees.
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Affiliation(s)
- Gongfu Ye
- Fujian Academy of Forestry Sciences, Fuzhou, Fujian, 350012, China
- Fujian Casuarina Engineering Technology Research Center, Fuzhou, Fujian, 350012, China
| | - Hangxiao Zhang
- Basic Forestry and Proteomics Research Center, College of Forestry, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Bihua Chen
- Fujian Academy of Forestry Sciences, Fuzhou, Fujian, 350012, China
| | - Sen Nie
- Fujian Academy of Forestry Sciences, Fuzhou, Fujian, 350012, China
| | - Hai Liu
- Fujian Forestry Investigations and Planning Institute, Fuzhou, Fujian, 350003, China
| | - Wei Gao
- Fujian Academy of Forestry Sciences, Fuzhou, Fujian, 350012, China
| | - Huiyuan Wang
- Basic Forestry and Proteomics Research Center, College of Forestry, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Yubang Gao
- Basic Forestry and Proteomics Research Center, College of Forestry, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
| | - Lianfeng Gu
- Basic Forestry and Proteomics Research Center, College of Forestry, Fujian Provincial Key Laboratory of Haixia Applied Plant Systems Biology, Fujian Agriculture and Forestry University, Fuzhou, 350002, China
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20
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Azuma W, Ishii HR, Masaki T. Height-related variations of leaf traits reflect strategies for maintaining photosynthetic and hydraulic homeostasis in mature and old Pinus densiflora trees. Oecologia 2019; 189:317-328. [DOI: 10.1007/s00442-018-4325-x] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2018] [Accepted: 12/10/2018] [Indexed: 11/29/2022]
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21
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Kuusk V, Niinemets Ü, Valladares F. Structural controls on photosynthetic capacity through juvenile‐to‐adult transition and needle ageing in Mediterranean pines. Funct Ecol 2018. [DOI: 10.1111/1365-2435.13087] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/16/2023]
Affiliation(s)
- Vivian Kuusk
- Institute of Agricultural and Environmental SciencesEstonian University of Life Sciences Tartu Estonia
| | - Ülo Niinemets
- Institute of Agricultural and Environmental SciencesEstonian University of Life Sciences Tartu Estonia
- Estonian Academy of Sciences Tallinn Estonia
| | - Fernando Valladares
- LINCGlobalDepartamento de Biogeografía y Cambio GlobalMuseo Nacional de Ciencias NaturalesMNCN‐CSIC Madrid Spain
- Departamento de Biología y GeologíaESCETUniversidad Rey Juan Carlos Móstoles Spain
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