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McNamara JM, Dall SRX, Houston AI, Leimar O. The evolutionary consequences of learning under competition. Proc Biol Sci 2024; 291:20241141. [PMID: 39110908 PMCID: PMC11305653 DOI: 10.1098/rspb.2024.1141] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Revised: 06/17/2024] [Accepted: 06/17/2024] [Indexed: 08/10/2024] Open
Abstract
Learning is a taxonomically widespread process by which animals change their behavioural responses to stimuli as a result of experience. In this way, it plays a crucial role in the development of individual behaviour and underpins substantial phenotypic variation within populations. Nevertheless, the impact of learning in social contexts on evolutionary change is not well understood. Here, we develop game theoretical models of competition for resources in small groups (e.g. producer-scrounger and hawk-dove games) in which actions are controlled by reinforcement learning and show that biases in the subjective valuation of different actions readily evolve. Moreover, in many cases, the convergence stable levels of bias exist at fitness minima and therefore lead to disruptive selection on learning rules and, potentially, to the evolution of genetic polymorphisms. Thus, we show how reinforcement learning in social contexts can be a driver of evolutionary diversification. In addition, we consider the evolution of ability in our games, showing that learning can also drive disruptive selection on the ability to perform a task.
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Affiliation(s)
- John M. McNamara
- School of Mathematics, University of Bristol, BristolBS8 1UG, UK
| | - Sasha R. X. Dall
- Centre for Ecology and Conservation, University of Exeter, ExeterTR10 9FE, UK
| | | | - Olof Leimar
- Department of Zoology, Stockholm University, 10691 Stockholm, Sweden
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2
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Jónsdóttir GÓ, von Elm LM, Ingimarsson F, Tersigni S, Snorrason SS, Pálsson A, Steele SE. Diversity in the internal functional feeding elements of sympatric morphs of Arctic charr (Salvelinus alpinus). PLoS One 2024; 19:e0300359. [PMID: 38771821 PMCID: PMC11108142 DOI: 10.1371/journal.pone.0300359] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/22/2023] [Accepted: 02/23/2024] [Indexed: 05/23/2024] Open
Abstract
The diversity of functional feeding anatomy is particularly impressive in fishes and correlates with various interspecific ecological specializations. Intraspecific polymorphism can manifest in divergent feeding morphology and ecology, often along a benthic-pelagic axis. Arctic charr (Salvelinus alpinus) is a freshwater salmonid known for morphological variation and sympatric polymorphism and in Lake Þingvallavatn, Iceland, four morphs of charr coexist that differ in preferred prey, behaviour, habitat use, and external feeding morphology. We studied variation in six upper and lower jaw bones in adults of these four morphs using geometric morphometrics and univariate statistics. We tested for allometric differences in bone size and shape among morphs, morph effects on bone size and shape, and divergence along the benthic-pelagic axis. We also examined the degree of integration between bone pairs. We found differences in bone size between pelagic and benthic morphs for two bones (dentary and premaxilla). There was clear bone shape divergence along a benthic-pelagic axis in four bones (dentary, articular-angular, premaxilla and maxilla), as well as allometric shape differences between morphs in the dentary. Notably for the dentary, morph explained more shape variation than bone size. Comparatively, benthic morphs possess a compact and taller dentary, with shorter dentary palate, consistent with visible (but less prominent) differences in external morphology. As these morphs emerged in the last 10,000 years, these results indicate rapid functional evolution of specific feeding structures in arctic charr. This sets the stage for studies of the genetics and development of rapid and parallel craniofacial evolution.
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Affiliation(s)
| | - Laura-Marie von Elm
- Institute of Life- and Environmental Science, University of Iceland, Reykjavik, Iceland
| | | | - Samuel Tersigni
- Institute of Life- and Environmental Science, University of Iceland, Reykjavik, Iceland
| | | | - Arnar Pálsson
- Institute of Life- and Environmental Science, University of Iceland, Reykjavik, Iceland
| | - Sarah Elizabeth Steele
- Institute of Life- and Environmental Science, University of Iceland, Reykjavik, Iceland
- Canadian Museum of Nature, Ottawa, Canada
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3
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Liu F, Gaul L, Giometto A, Wu M. A high throughput array microhabitat platform reveals how light and nitrogen colimit the growth of algal cells. Sci Rep 2024; 14:9860. [PMID: 38684720 PMCID: PMC11058252 DOI: 10.1038/s41598-024-59041-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2023] [Accepted: 04/05/2024] [Indexed: 05/02/2024] Open
Abstract
A mechanistic understanding of algal growth is essential for maintaining a sustainable environment in an era of climate change and population expansion. It is known that algal growth is tightly controlled by complex interactive physical and chemical conditions. Many mathematical models have been proposed to describe the relation of algal growth and environmental parameters, but experimental verification has been difficult due to the lack of tools to measure cell growth under precise physical and chemical conditions. As such, current models depend on the specific testing systems, and the fitted growth kinetic constants vary widely for the same organisms in the existing literature. Here, we present a microfluidic platform where both light intensity and nutrient gradients can be well controlled for algal cell growth studies. In particular, light shading is avoided, a common problem in macroscale assays. Our results revealed that light and nitrogen colimit the growth of algal cells, with each contributing a Monod growth kinetic term in a multiplicative model. We argue that the microfluidic platform can lead towards a general culture system independent algal growth model with systematic screening of many environmental parameters. Our work advances technology for algal cell growth studies and provides essential information for future bioreactor designs and ecological predictions.
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Affiliation(s)
- Fangchen Liu
- Department of Biological and Environmental Engineering, Cornell University, Ithaca, NY, USA
| | - Larissa Gaul
- Department of Biological and Environmental Engineering, Cornell University, Ithaca, NY, USA
| | - Andrea Giometto
- School of Civil and Environmental Engineering, Cornell University, Ithaca, NY, USA.
| | - Mingming Wu
- Department of Biological and Environmental Engineering, Cornell University, Ithaca, NY, USA.
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4
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Searle PC, Shiozawa DK, Evans RP, Hill JT, Suli A, Stark MR, Belk MC. Heterochronic shift in gene expression leads to ontogenetic morphological divergence between two closely related polyploid species. iScience 2024; 27:109566. [PMID: 38632992 PMCID: PMC11022054 DOI: 10.1016/j.isci.2024.109566] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2023] [Revised: 11/04/2023] [Accepted: 03/22/2024] [Indexed: 04/19/2024] Open
Abstract
Heterochrony-alteration to the rate or timing of development-is an important mechanism of trait differentiation associated with speciation. Heterochrony may explain the morphological divergence between two polyploid species, June sucker (Chasmistes liorus) and Utah sucker (Catostomus ardens). The larvae of both species have terminal mouths; however, as adults, June sucker and Utah sucker develop subterminal and ventral mouths, respectively. We document a difference in the timing of shape development and a corresponding change in the timing of gene expression, suggesting the distinctive mouth morphology in June suckers may result from paedomorphosis. Specifically, adult June suckers exhibit an intermediate mouth morphology between the larval (terminal) and ancestral (ventral) states. Endemic and sympatric Chasmistes/Catostomus pairs in two other lakes also are morphologically divergent, but genetically similar. These species pairs could have resulted from the differential expression of genes and corresponding divergence in trait development. Paedomorphosis may lead to adaptive diversification in Catostomids.
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Affiliation(s)
- Peter C. Searle
- Department of Ecology and Evolutionary Biology, Cornell University, Ithaca, NY 14853, USA
- Department of Biology, Brigham Young University, Provo, UT 84602, USA
| | | | - R. Paul Evans
- Department of Microbiology and Molecular Biology, Brigham Young University, Provo, UT 84602, USA
| | - Jonathon T. Hill
- Department of Cell Biology and Physiology, Brigham Young University, Provo, UT 84602, USA
| | - Arminda Suli
- Department of Cell Biology and Physiology, Brigham Young University, Provo, UT 84602, USA
| | - Michael R. Stark
- Department of Cell Biology and Physiology, Brigham Young University, Provo, UT 84602, USA
| | - Mark C. Belk
- Department of Biology, Brigham Young University, Provo, UT 84602, USA
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Leblanc CA, Räsänen K, Morrissey M, Skúlason S, Ferguson M, Kristjánsson BK. Fine scale diversity in the lava: genetic and phenotypic diversity in small populations of Arctic charr Salvelinus alpinus. BMC Ecol Evol 2024; 24:45. [PMID: 38622503 PMCID: PMC11017478 DOI: 10.1186/s12862-024-02232-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2023] [Accepted: 03/28/2024] [Indexed: 04/17/2024] Open
Abstract
BACKGROUND A major goal in evolutionary biology is to understand the processes underlying phenotypic variation in nature. Commonly, studies have focused on large interconnected populations or populations found along strong environmental gradients. However, studies on small fragmented populations can give strong insight into evolutionary processes in relation to discrete ecological factors. Evolution in small populations is believed to be dominated by stochastic processes, but recent work shows that small populations can also display adaptive phenotypic variation, through for example plasticity and rapid adaptive evolution. Such evolution takes place even though there are strong signs of historical bottlenecks and genetic drift. Here we studied 24 small populations of the freshwater fish Arctic charr (Salvelinus alpinus) found in groundwater filled lava caves. Those populations were found within a few km2-area with no apparent water connections between them. We studied the relative contribution of neutral versus non-neutral evolutionary processes in shaping phenotypic divergence, by contrasting patterns of phenotypic and neutral genetic divergence across populations in relation to environmental measurements. This allowed us to model the proportion of phenotypic variance explained by the environment, taking in to account the observed neutral genetic structure. RESULTS These populations originated from the nearby Lake Mývatn, and showed small population sizes with low genetic diversity. Phenotypic variation was mostly correlated with neutral genetic diversity with only a small environmental effect. CONCLUSIONS Phenotypic diversity in these cave populations appears to be largely the product of neutral processes, fitting the classical evolutionary expectations. However, the fact that neutral processes did not explain fully the phenotypic patterns suggests that further studies can increase our understanding on how neutral evolutionary processes can interact with other forces of selection at early stages of divergence. The accessibility of these populations has provided the opportunity for long-term monitoring of individual fish, allowing tracking how the environment can influence phenotypic and genetic divergence for shaping and maintaining diversity in small populations. Such studies are important, especially in freshwater, as habitat alteration is commonly breaking populations into smaller units, which may or may not be viable.
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Affiliation(s)
- Camille A Leblanc
- Department of Aquaculture and Fish Biology, Hólar University, Sauðárkrókur, Iceland.
| | - Katja Räsänen
- Department of Biology and Environmental Science, University of Jyväskylä, Jyväskylä, Finland
| | | | - Skúli Skúlason
- Department of Aquaculture and Fish Biology, Hólar University, Sauðárkrókur, Iceland
- Icelandic Museum of Natural History, Reykjavik, Iceland
| | - Moira Ferguson
- Department of Integrative Biology, University of Guelph, Guelph, Ontario, Canada
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6
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Nelson JA, Thorarensen HT. Thermal tolerance of cultured and wild Icelandic arctic charr (Salvelinus alpinus) at self-selected flow rates. J Therm Biol 2024; 121:103863. [PMID: 38723312 DOI: 10.1016/j.jtherbio.2024.103863] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2023] [Revised: 04/18/2024] [Accepted: 04/21/2024] [Indexed: 05/26/2024]
Abstract
Climate change is predicted to change not only the temperature of many freshwater systems but also flow dynamics. Understanding how fishes will fare in the future requires knowing how they will respond to both extended variations of temperature and flow. Arctic charr have had their thermal tolerance measured, but never with respect to flow. Additionally, this circumpolar species has multiple populations exhibiting dramatic phenotypic plasticity which may mean that regional differences in thermal tolerance are unaccounted for. In Iceland, Arctic charr populations have experienced highly variable flow and temperature conditions over the past 10,000 years. The Icelandic climate, topography and geothermal activity have created a mosaic of freshwater habitats inhabited by charr that vary substantially in both temperature and flow. Our purpose was to test whether populations from these varied environments had altered thermal tolerance and whether phenotypic plasticity of thermal tolerance in charr depends on flow. We raised cultured Icelandic charr from hatch under a 2 X 2 matrix of flow and temperature and compared them to wild charr captured from matching flow and temperature environments. Wild fish were more thermally tolerant than cultured fish at both acclimation temperatures and were more thermally plastic. Icelandic Arctic charr were more thermally tolerant than comparison charr populations across Europe and North America, but only when acclimated to 13 °C; fish acclimated to 5 °C compared equably with comparison charr populations. Icelandic Arctic charr were also more thermally plastic than all but one other salmonine species. Neither flow of rearing or the flow selected during a thermal tolerance (CTmax) test factored into thermal tolerance. Thermal tolerance was also independent of body size, condition factor, heart and gill size. In summary, wild Icelandic Arctic charr have greater thermal tolerance and plasticity than predicted from the literature and their latitude, but artificial selection for properties like growth rate or fecundity may be breeding that increased tolerance out of cultured fish. As the world moves toward a warmer climate and increased dependence on cultured fish, this is a noteworthy result and merits further study.
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Affiliation(s)
- Jay A Nelson
- Department of Aquaculture and Fish Biology, Hólar University College, 551, Sauðárkrókur, Iceland.
| | - Helgi Thor Thorarensen
- Department of Aquaculture and Fish Biology, Hólar University College, 551, Sauðárkrókur, Iceland
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7
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Tiddy IC, Schneider K, Elmer KR. Environmental correlates of adaptive diversification in postglacial freshwater fishes. JOURNAL OF FISH BIOLOGY 2024; 104:517-535. [PMID: 37984834 DOI: 10.1111/jfb.15621] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/24/2023] [Revised: 11/14/2023] [Accepted: 11/15/2023] [Indexed: 11/22/2023]
Abstract
Determining how environmental conditions contribute to divergence among populations and drive speciation is fundamental to resolving mechanisms and understanding outcomes in evolutionary biology. Postglacial freshwater fish species in the Northern Hemisphere are ideal biological systems to explore the effects of environment on diversification in morphology, ecology, and genetics (ecomorph divergences) within lakes. To date, various environmental factors have been implicated in the presence of multiple ecomorphs within particular lakes or regions. However, concerted evidence for generalizable patterns in environmental variables associated with speciation across geographical regions and across species and genera has been lacking. Here, we aimed to identify key biotic and abiotic factors associated with ecological divergence of postglacial freshwater fish species into multiple sympatric ecomorphs, focusing on species in the well-studied, widespread, and co-distributed genera Gasterosteus, Salvelinus, and Coregonus (stickleback, charr, and whitefish, respectively). We found that the presence of multiple sympatric ecomorphs tended to be associated with increasing lake surface area, maximum depth, and nutrient availability. In addition, predation, competition, and prey availability were suggested to play a role in divergence into multiple ecomorphs, but the effects of biotic factors require further study. Although we identified several environmental factors correlated with the presence of multiple ecomorphs, there were substantial data gaps across species and regions. An improved understanding of these systems may provide insight into both generalizable environmental factors involved in speciation in other systems, and potential ecological and evolutionary responses of species complexes when these variables are altered by environmental change.
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Affiliation(s)
- Isabelle C Tiddy
- School of Biodiversity, One Health & Veterinary Medicine, College of Medical, Veterinary & Life Sciences, University of Glasgow, Glasgow, UK
| | - Kevin Schneider
- School of Biodiversity, One Health & Veterinary Medicine, College of Medical, Veterinary & Life Sciences, University of Glasgow, Glasgow, UK
| | - Kathryn R Elmer
- School of Biodiversity, One Health & Veterinary Medicine, College of Medical, Veterinary & Life Sciences, University of Glasgow, Glasgow, UK
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8
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Dellinger M, Steele SE, Sprockel E, Philip J, Pálsson A, Benhaïm D. Variation in personality shaped by evolutionary history, genotype and developmental plasticity in response to feeding modalities in the Arctic charr. Proc Biol Sci 2023; 290:20232302. [PMID: 38087921 PMCID: PMC10716646 DOI: 10.1098/rspb.2023.2302] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2023] [Accepted: 11/16/2023] [Indexed: 12/18/2023] Open
Abstract
Animal personality has been shown to be influenced by both genetic and environmental factors and shaped by natural selection. Currently, little is known about mechanisms influencing the development of personality traits. This study examines the extent to which personality development is genetically influenced and/or environmentally responsive (plastic). We also investigated the role of evolutionary history, assessing whether personality traits could be canalized along a genetic and ecological divergence gradient. We tested the plastic potential of boldness in juveniles of five Icelandic Arctic charr morphs (Salvelinus alpinus), including two pairs of sympatric morphs, displaying various degrees of genetic and ecological divergence from the ancestral anadromous charr, split between treatments mimicking benthic versus pelagic feeding modalities. We show that differences in mean boldness are mostly affected by genetics. While the benthic treatment led to bolder individuals overall, the environmental effect was rather weak, suggesting that boldness lies under strong genetic influence with reduced plastic potential. Finally, we found hints of differences by morphs in boldness canalization through reduced variance and plasticity, and higher consistency in boldness within morphs. These findings provide new insights on how behavioural development may impact adaptive diversification.
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Affiliation(s)
- Marion Dellinger
- Department of Aquaculture and Fish Biology, Hólar University, Hólar, Iceland
- Institute of Life and Environmental Sciences, School of Engineering and Natural Sciences, University of Iceland, Reykjavík, Iceland
| | - Sarah E. Steele
- Institute of Life and Environmental Sciences, School of Engineering and Natural Sciences, University of Iceland, Reykjavík, Iceland
- Canadian Museum of Nature, Ottawa, Canada
| | - Evert Sprockel
- Department of Aquaculture and Fish Biology, Hólar University, Hólar, Iceland
- HAS University of Applied Sciences, 's-Hertogenbosch, The Netherlands
| | - Joris Philip
- Department of Aquaculture and Fish Biology, Hólar University, Hólar, Iceland
- Scottish Centre for Ecology and the Natural Environment, University of Glasgow, Glasgow, UK
| | - Arnar Pálsson
- Institute of Life and Environmental Sciences, School of Engineering and Natural Sciences, University of Iceland, Reykjavík, Iceland
| | - David Benhaïm
- Department of Aquaculture and Fish Biology, Hólar University, Hólar, Iceland
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McWhinnie K, Negi D, Tanner KE, Parsons KJ. Functional trait plasticity diverges between sexes in African cichlids: A contribution toward ecological sexual dimorphism? Ecol Evol 2023; 13:e10702. [PMID: 38034329 PMCID: PMC10682861 DOI: 10.1002/ece3.10702] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/09/2022] [Revised: 08/02/2023] [Accepted: 08/17/2023] [Indexed: 12/02/2023] Open
Abstract
Phenotypic plasticity enables development to produce multiple phenotypes in response to environmental conditions. Plasticity driven variation has been suggested to play a key role in adaptive divergence, and plasticity itself can evolve. However, the interaction of plasticity with the multiple levels involved with adaptive divergence is less understood. For example, sexual dimorphism can contribute adaptive variation through ecological sexual dimorphism (ESD), but the contribution of plasticity to this phenomenon is unknown. Therefore, to determine the potential contribution of plasticity to ESD, we used the adaptive radiation of Malawi cichlids. Two mouthbrooding species (Labeotropheus fuelleborni and Tropheops "Red Cheek") with differences in foraging tactics underwent foraging experiments using benthic and limnetic treatments while accounting for sex. Plasticity in craniofacial shape and three functionally important traits were measured. Plasticity was shown, but without any sex-based differences in shape. However, for mechanical advantage traits of the mandible sex by diet interactions were found. This suggests that ESD, may be influenced by phenotypic plasticity that diverges between sexes. Given the involvement of the mandible in parental care in cichlids this may indicate that sexual divergence in plasticity may trade-off against maternal care tactics.
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Affiliation(s)
- Kirsty McWhinnie
- Institute of Biodiversity, Animal Health, and Comparative MedicineUniversity of GlasgowGlasgowUK
| | - Deepti Negi
- Institute of Biodiversity, Animal Health, and Comparative MedicineUniversity of GlasgowGlasgowUK
| | - K. Elizabeth Tanner
- Institute of Biodiversity, Animal Health, and Comparative MedicineUniversity of GlasgowGlasgowUK
- School of Engineering and Materials ScienceQueen Mary University of LondonLondonUK
| | - Kevin J. Parsons
- Institute of Biodiversity, Animal Health, and Comparative MedicineUniversity of GlasgowGlasgowUK
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10
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Ragauskas A, Ignatavičienė I, Rakauskas V, Grauda D, Prakas P, Butkauskas D. Trends of Eurasian Perch ( Perca fluviatilis) mtDNA ATP6 Region Genetic Diversity within the Hydro-Systems of the Eastern Part of the Baltic Sea in the Anthropocene. Animals (Basel) 2023; 13:3057. [PMID: 37835663 PMCID: PMC10571732 DOI: 10.3390/ani13193057] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/30/2023] [Revised: 09/21/2023] [Accepted: 09/26/2023] [Indexed: 10/15/2023] Open
Abstract
The intraspecific genetic diversity of freshwater fish inhabiting hydro-systems of the macrogeographic area spreading from the Black to Baltic Seas requires comprehensive investigation from fundamental and practical perspectives. The current study focused on the involvement of the mtDNA ATP6 region in the adaptability and microevolution of Perca fluviatilis within phylogeographic and anthropogenic contexts. We sequenced a 627 bp fragment encompassing the ATP6 region and used it for genetic analysis of 193 perch caught in Latvia, Lithuania, Belarus, and Ukraine, representing natural and anthropogenically impacted populations. We evaluated patterns of intraspecific genetic diversity in the ATP6 region and phylogeographic trends within the studied area compared with previously established D-loop trends. Evaluation of ATP6 coding sequence variability revealed that among 13 newly detected haplotypes, only two were caused by non-synonymous substitutions of amino acids of the protein. PCoA revealed three genetic groups (I-III) based on the ATP6 region that encompassed four previously described genetic groups established based on the mtDNA D-loop. The two mtDNA regions (D-loop and ATP6) have microevolved at least partially independently. Prolonged anthropogenic impacts may generate new point mutations at the ATP6 locus, but this phenomenon could be mainly concealed by natural selection and reparation processes.
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Affiliation(s)
- Adomas Ragauskas
- Nature Research Centre, Akademijos Str. 2, 08412 Vilnius, Lithuania; (I.I.); (V.R.); (P.P.); (D.B.)
| | - Ieva Ignatavičienė
- Nature Research Centre, Akademijos Str. 2, 08412 Vilnius, Lithuania; (I.I.); (V.R.); (P.P.); (D.B.)
| | - Vytautas Rakauskas
- Nature Research Centre, Akademijos Str. 2, 08412 Vilnius, Lithuania; (I.I.); (V.R.); (P.P.); (D.B.)
| | - Dace Grauda
- Institute of Biology, University of Latvia, Jelgavas Str. 1, LV-1004 Riga, Latvia;
| | - Petras Prakas
- Nature Research Centre, Akademijos Str. 2, 08412 Vilnius, Lithuania; (I.I.); (V.R.); (P.P.); (D.B.)
| | - Dalius Butkauskas
- Nature Research Centre, Akademijos Str. 2, 08412 Vilnius, Lithuania; (I.I.); (V.R.); (P.P.); (D.B.)
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11
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Horta-Lacueva QJB, Jónsson ZO, Thorholludottir DAV, Hallgrímsson B, Kapralova KH. Rapid and biased evolution of canalization during adaptive divergence revealed by dominance in gene expression variability during Arctic charr early development. Commun Biol 2023; 6:897. [PMID: 37652977 PMCID: PMC10471602 DOI: 10.1038/s42003-023-05264-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2022] [Accepted: 08/21/2023] [Indexed: 09/02/2023] Open
Abstract
Adaptive evolution may be influenced by canalization, the buffering of developmental processes from environmental and genetic perturbations, but how this occurs is poorly understood. Here, we explore how gene expression variability evolves in diverging and hybridizing populations, by focusing on the Arctic charr (Salvelinus alpinus) of Thingvallavatn, a classic case of divergence between feeding habitats. We report distinct profiles of gene expression variance for both coding RNAs and microRNAs between the offspring of two contrasting morphs (benthic/limnetic) and their hybrids reared in common conditions and sampled at two key points of cranial development. Gene expression variance in the hybrids is substantially affected by maternal effects, and many genes show biased expression variance toward the limnetic morph. This suggests that canalization, as inferred by gene expression variance, can rapidly diverge in sympatry through multiple gene pathways, which are associated with dominance patterns possibly biasing evolutionary trajectories and mitigating the effects of hybridization on adaptive evolution.
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Affiliation(s)
- Quentin Jean-Baptiste Horta-Lacueva
- Institute of Life and Environmental Sciences, University of Iceland, Reykjavík, Iceland.
- Department of Biology, Lund University, Lund, Sweden.
| | | | - Dagny A V Thorholludottir
- Institute of Life and Environmental Sciences, University of Iceland, Reykjavík, Iceland
- University of Veterinary Medicine Vienna, Institute of Population Genetics, Vienna, Austria
| | - Benedikt Hallgrímsson
- Department of Cell Biology and Anatomy, Alberta Children's Hospital Research Institute, University of Calgary, Calgary, Alberta, Canada
| | - Kalina Hristova Kapralova
- Institute of Life and Environmental Sciences, University of Iceland, Reykjavík, Iceland.
- The Institute for Experimental Pathology at Keldur, University of Iceland, Reykjavík, Iceland.
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12
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Pettitt-Wade H, Hussey NE, Gallagher CP, Lea EV, Orrell DL, Loseto LL. Contrasting intra-individual variation in size-based trophic and habitat shifts for two coastal Arctic fish species. Oecologia 2023:10.1007/s00442-023-05423-9. [PMID: 37488308 PMCID: PMC10386975 DOI: 10.1007/s00442-023-05423-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2022] [Accepted: 07/09/2023] [Indexed: 07/26/2023]
Abstract
Within and among species variation in trophic and habitat shifts with body size can indicate the potential adaptive capacity of species to ecosystem change. In Arctic coastal ecosystems, which experience dramatic seasonal shifts and are undergoing rapid change, quantifying the trophic flexibility of coastal fishes with different migratory tactics has received limited attention. We examined the relationships among body length and condition (Fulton's K, phase angle from Bioelectrical Impedance Analysis) with trophic and habitat shifts (differences in δ15N and δ13C between blood tissues with different turnover rates) of two abundant and culturally important species, anadromous Arctic char (Salvelinus alpinus, n = 38) and sedentary Greenland cod (Gadus ogac, n = 65) during summer in coastal marine waters near Ulukhaktok, Northwest Territories, Canada. Habitat shifts (δ13C) increased with length (i.e., pelagic to benthic-littoral) and crossed-equilibrium (zero) at mid-sizes for both species. Seasonal trophic shifts (δ15N) were generally positive (i.e., increasing trophic level) for Arctic char and negative for Greenland cod. As hypothesised, intra-individual variation in size-based trophic shifts (δ15N-length residuals) increased with length for Arctic char. However, there were no trends with length in Greenland cod. Our findings highlight the importance of flexibility through ontogeny and mobility for Arctic char, whereas Greenland cod were generalist to localized prey and habitat across all sizes. The significant effect of body condition (phase angle) on size-based trophic shifts in Arctic char, and size-based habitat shifts in Greenland cod, highlight the potential trade-offs of contrasting life history strategies and capacity for ontogenetic niche plasticity.
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Affiliation(s)
- Harri Pettitt-Wade
- Fisheries and Oceans Canada, Freshwater Institute, Winnipeg, MB, R3T 2N6, Canada.
- Integrative Biology, University of Windsor, Windsor, ON, N9B 3P4, Canada.
| | - Nigel E Hussey
- Integrative Biology, University of Windsor, Windsor, ON, N9B 3P4, Canada
| | - Colin P Gallagher
- Fisheries and Oceans Canada, Freshwater Institute, Winnipeg, MB, R3T 2N6, Canada
| | - Ellen V Lea
- Fisheries and Oceans Canada, Inuvik, NT, X0E 0T0, Canada
| | - Danielle L Orrell
- Integrative Biology, University of Windsor, Windsor, ON, N9B 3P4, Canada
| | - Lisa L Loseto
- Fisheries and Oceans Canada, Freshwater Institute, Winnipeg, MB, R3T 2N6, Canada
- Environment and Geography, University of Manitoba, Winnipeg, MB, R3T 2N2, Canada
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13
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Liu F, Gaul L, Giometto A, Wu M. Colimitation of light and nitrogen on algal growth revealed by an array microhabitat platform. ARXIV 2023:arXiv:2307.02646v1. [PMID: 37461420 PMCID: PMC10350088] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 07/22/2023]
Abstract
Microalgae are key players in the global carbon cycle and emerging producers of biofuels. Algal growth is critically regulated by its complex microenvironment, including nitrogen and phosphorous levels, light intensity, and temperature. Mechanistic understanding of algal growth is important for maintaining a balanced ecosystem at a time of climate change and population expansion, as well as providing essential formulations for optimizing biofuel production. Current mathematical models for algal growth in complex environmental conditions are still in their infancy, due in part to the lack of experimental tools necessary to generate data amenable to theoretical modeling. Here, we present a high throughput microfluidic platform that allows for algal growth with precise control over light intensity and nutrient gradients, while also performing real-time microscopic imaging. We propose a general mathematical model that describes algal growth under multiple physical and chemical environments, which we have validated experimentally. We showed that light and nitrogen colimited the growth of the model alga Chlamydomonas reinhardtii following a multiplicative Monod kinetic model. The microfluidic platform presented here can be easily adapted to studies of other photosynthetic micro-organisms, and the algal growth model will be essential for future bioreactor designs and ecological predictions.
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Affiliation(s)
- Fangchen Liu
- Department of Biological and Environmental Engineering, Cornell University, Ithaca, NY, USA
| | - Larissa Gaul
- Department of Biological and Environmental Engineering, Cornell University, Ithaca, NY, USA
| | - Andrea Giometto
- School of Civil and Environmental Engineering, Cornell University, Ithaca, NY, USA
| | - Mingming Wu
- Department of Biological and Environmental Engineering, Cornell University, Ithaca, NY, USA
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14
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Markevich GN, Pavlova NS, Kapitanova DV, Esin EV. Bone calcification rate as a factor of craniofacial transformations in salmonid fish: Insights from an experiment with hormonal treatment of calcium metabolism. Evol Dev 2023; 25:274-288. [PMID: 37540043 DOI: 10.1111/ede.12453] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/09/2023] [Revised: 07/18/2023] [Accepted: 07/21/2023] [Indexed: 08/05/2023]
Abstract
Adaptation to different environments can be achieved by physiological shifts throughout development. Hormonal regulators shape the physiological and morphological traits of the evolving animals making them fit for the particular ecological surroundings. We hypothesized that the artificially induced hypersynthesis of calcitonin and parathyroid hormone mutually influencing calcium metabolism could affect bone formation during early ontogeny in fish imitating the heterochrony in craniofacial ossification in natural adaptive morphs. Conducting an experiment, we found that the long-standing treatment of salmonid juveniles with high doses of both hormones irreversibly shifts the corresponding hormone status for a period well beyond the time scale for total degradation of the injected hormone. The hormones program the ossification of the jaw suspension bones and neurocranial elements in a specific manner affecting the jaws position and pharingo-branchial area stretching. These morphological shifts resemble the adaptive variants found in sympatric pelagic and demersal morphs of salmonids. We conclude that solitary deviations in the regulators of calcium metabolism could determine functional morphological traits via transformations in skeletal development.
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Affiliation(s)
- Grigorii N Markevich
- Lab of Lower Vertabrate Ecology, Lab of Evolutionary Morphology, A.N. Severtsov Institute of Ecology and Evolution of the Russian Academy of Sciences, Moscow, Russia
- Scientific Department, Kronotsky Nature Reserve, Yelizovo, Kamchatka Region, Russia
| | - Nadezhda S Pavlova
- Department of Human and Animal Physiology, Lomonosov Moscow State University, Faculty of Biology, Moscow, Russia
| | - Daria V Kapitanova
- Lab of Lower Vertabrate Ecology, Lab of Evolutionary Morphology, A.N. Severtsov Institute of Ecology and Evolution of the Russian Academy of Sciences, Moscow, Russia
- Lab of Postnatal Ontogenesis, N.K. Koltsov Institute of Developmental Biology of the Russian Academy of Sciences, Moscow, Russia
| | - Evgeny V Esin
- Lab of Lower Vertabrate Ecology, Lab of Evolutionary Morphology, A.N. Severtsov Institute of Ecology and Evolution of the Russian Academy of Sciences, Moscow, Russia
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15
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Závorka L, Blanco A, Chaguaceda F, Cucherousset J, Killen SS, Liénart C, Mathieu-Resuge M, Němec P, Pilecky M, Scharnweber K, Twining CW, Kainz MJ. The role of vital dietary biomolecules in eco-evo-devo dynamics. Trends Ecol Evol 2023; 38:72-84. [PMID: 36182405 DOI: 10.1016/j.tree.2022.08.010] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2022] [Revised: 08/30/2022] [Accepted: 08/31/2022] [Indexed: 12/30/2022]
Abstract
The physiological dependence of animals on dietary intake of vitamins, amino acids, and fatty acids is ubiquitous. Sharp differences in the availability of these vital dietary biomolecules among different resources mean that consumers must adopt a range of strategies to meet their physiological needs. We review the emerging work on omega-3 long-chain polyunsaturated fatty acids, focusing predominantly on predator-prey interactions, to illustrate that trade-off between capacities to consume resources rich in vital biomolecules and internal synthesis capacity drives differences in phenotype and fitness of consumers. This can then feedback to impact ecosystem functioning. We outline how focus on vital dietary biomolecules in eco-eco-devo dynamics can improve our understanding of anthropogenic changes across multiple levels of biological organization.
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Affiliation(s)
- Libor Závorka
- WasserCluster Lunz - Biologische Station, Inter-university Centre for Aquatic Ecosystem Research, A-3293 Lunz am See, Austria.
| | - Andreu Blanco
- Centro de Investigación Mariña, Universidade de Vigo, EcoCost, Campus de Vigo, As Lagoas, Marcosende, 36310, Vigo, Spain
| | - Fernando Chaguaceda
- Department of Aquatic Sciences and Assessment, Swedish University of Agricultural Sciences, Box 7050, 750 07 Uppsala, Sweden
| | - Julien Cucherousset
- Laboratoire Evolution et Diversité Biologique (UMR 5174 EDB), CNRS, Université Paul Sabatier - Toulouse III, 31062 Toulouse, France
| | - Shaun S Killen
- School of Biodiversity, One Health & Veterinary Medicine, Graham Kerr Building, College of Medical, Veterinary & Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK
| | - Camilla Liénart
- Tvärminne Zoological Station, University of Helsinki, J.A. Palménin tie 260, Hanko, 10900, Finland
| | - Margaux Mathieu-Resuge
- WasserCluster Lunz - Biologische Station, Inter-university Centre for Aquatic Ecosystem Research, A-3293 Lunz am See, Austria; Université de Brest, CNRS, IRD, Ifremer, LEMAR, 29280 Plouzané, Brittany, France; UMR DECOD (Ecosystem Dynamics and Sustainability), Ifremer, INRAE, Institut Agro, Plouzané, France
| | - Pavel Němec
- Department of Zoology, Faculty of Science, Charles University, CZ-12844 Prague, Czech Republic
| | - Matthias Pilecky
- WasserCluster Lunz - Biologische Station, Inter-university Centre for Aquatic Ecosystem Research, A-3293 Lunz am See, Austria; Danube University Krems, Dr. Karl Dorrek Straße 30, A-3500 Krems, Austria
| | - Kristin Scharnweber
- University of Potsdam, Plant Ecology and Nature Conservation, Am Mühlenberg 3, 14476 Potsdam, Germany
| | - Cornelia W Twining
- Department of Fish Ecology and Evolution, Eawag - Swiss Federal Institute of Aquatic Science and Technology, Seestrasse 79, CH-6047 Kastanienbaum, Switzerland
| | - Martin J Kainz
- WasserCluster Lunz - Biologische Station, Inter-university Centre for Aquatic Ecosystem Research, A-3293 Lunz am See, Austria; Danube University Krems, Dr. Karl Dorrek Straße 30, A-3500 Krems, Austria
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16
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Smith C, Zięba G, Spence R, Przybylski M. Spatial heterogeneity in pH, body size and habitat size generates ecological opportunity in an evolutionary radiation. JOURNAL OF FISH BIOLOGY 2022; 101:1501-1508. [PMID: 36134556 DOI: 10.1111/jfb.15221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/22/2022] [Accepted: 09/14/2022] [Indexed: 06/16/2023]
Abstract
Much of the biological diversity we see today is thought to be the product of evolutionary radiation, the rapid proliferation of species from a single ancestor into multiple discrete forms. Spatial heterogeneity in environmental variables has been proposed as creating the necessary ecological opportunity to stimulate evolutionary radiation. Nonetheless, the ecological mechanisms generating and maintaining diversity in spatially heterogeneous environments are not fully understood. The authors investigated the role of strong spatial heterogeneity in generating ecological opportunity in an evolutionary radiation of freshwater populations of the three-spined stickleback (Gasterosteus aculeatus L.) on the island of North Uist using a spatially explicit Bayesian model. The authors identified pH, loch surface area and body size as predictors of variance in the number of lateral plates that comprise anti-predator armour in G. aculeatus. An East-West gradient of pH, a product of the distinctive environment of North Uist, generates a robust selective environment facilitating G. aculeatus evolutionary radiation. Larger lochs were associated with atypical phenotypes, possibly related to larger population sizes and greater selection efficiency. An association between pH and lateral plate number is likely an effect of body size, with a positive relationship between body size and lateral plate number that is mediated by swimming efficiency in G. aculeatus.
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Affiliation(s)
- Carl Smith
- Department of Ecology & Vertebrate Zoology, University of Łódź, Łódź, Poland
- Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic
| | - Grzegorz Zięba
- Department of Ecology & Vertebrate Zoology, University of Łódź, Łódź, Poland
| | - Rowena Spence
- Institute of Vertebrate Biology, Czech Academy of Sciences, Brno, Czech Republic
| | - Mirosław Przybylski
- Department of Ecology & Vertebrate Zoology, University of Łódź, Łódź, Poland
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17
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Burke TG, Pettitt-Wade H, Hollins JPW, Gallagher C, Lea E, Loseto L, Hussey NE. Evidence for three morphotypes among anadromous Arctic char (Salvelinus alpinus) sampled in the marine environment. JOURNAL OF FISH BIOLOGY 2022; 101:1441-1451. [PMID: 36097690 DOI: 10.1111/jfb.15214] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/22/2022] [Accepted: 09/07/2022] [Indexed: 06/15/2023]
Abstract
Variable resource use and responses to environmental conditions can lead to phenotypic diversity and distinct morphotypes within salmonids, including Arctic char (Salvelinus alpinus). Despite the cultural and economic importance of Arctic char in the Inuvialuit Settlement Region (ISR), limited data exist on the extent and presence of morphological diversity in this region. This is of concern for management given climate change impacts on regional fish populations. The authors investigated morphological diversity in anadromous Arctic char sampled during their summer marine migration-residency period when seasonal harvesting occurs in a coastal mixed-stock fishery. Geometric morphometric analysis was conducted using digital photographs of live Arctic char (n = 103) of which a sub-set was subsequently implanted with acoustic transmitters (n = 90) and released, and their overwintering lakes determined using active acoustic telemetry surveys. Twenty-three morphological landmarks were established and overlaid on digital images, and nine linear measurements of the body and head were recorded. Principle component analysis and K-means clustering based on linear measurements categorised fish into three morphotypes: slender body and slim head (n = 31), small and short head with a small mouth (n = 46) and elongated head shape with large mouth (n = 26). Tagged individuals of the three morphotypes occupied all lakes with no distinction observed. The three Arctic char morphotypes detected in this coastal mixed-stock fishery could represent adaptation to specific feeding-movement behaviours potentially tied to juvenile residency in freshwater systems, efficient exploitation of the marine prey pulse, or are relicts from ancestral types. To the authors' knowledge, this study is the first to identify distinct Arctic char morphotypes occurring in sympatry in the marine environment. Identifying phenotypic diversity will assist management to promote the sustainability of this regional fishery.
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Affiliation(s)
- Teah Grace Burke
- Department of Integrative Biology, University of Windsor, Windsor, ON, Canada
| | - Harri Pettitt-Wade
- Department of Integrative Biology, University of Windsor, Windsor, ON, Canada
- Freshwater Institute, Fisheries and Oceans Canada, Winnipeg, MB, Canada
| | - Jack P W Hollins
- Department of Integrative Biology, University of Windsor, Windsor, ON, Canada
| | - Colin Gallagher
- Freshwater Institute, Fisheries and Oceans Canada, Winnipeg, MB, Canada
| | - Ellen Lea
- Fisheries and Oceans Canada, Inuvik, NT, Canada
| | - Lisa Loseto
- Freshwater Institute, Fisheries and Oceans Canada, Winnipeg, MB, Canada
| | - Nigel E Hussey
- Department of Integrative Biology, University of Windsor, Windsor, ON, Canada
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18
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Beck SV, Räsänen K, Kristjánsson BK, Skúlason S, Jónsson ZO, Tsinganis M, Leblanc CA. Variation in egg size and offspring phenotype among and within seven Arctic charr morphs. Ecol Evol 2022; 12:e9427. [PMID: 36267683 PMCID: PMC9577412 DOI: 10.1002/ece3.9427] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2022] [Revised: 08/07/2022] [Accepted: 09/27/2022] [Indexed: 11/07/2022] Open
Abstract
Maternal effects have the potential to alter early developmental processes of offspring and contribute to adaptive diversification. Egg size is a major contributor to offspring phenotype, which can influence developmental trajectories and potential resource use. However, to what extent intraspecific variation in egg size facilitates evolution of resource polymorphism is poorly understood. We studied multiple resource morphs of Icelandic Arctic charr, ranging from an anadromous morph-with a phenotype similar to the proposed ancestral phenotype-to sympatric morphs that vary in their degree of phenotypic divergence from the ancestral anadromous morph. We characterized variation in egg size and tested whether egg size influenced offspring phenotype at early life stages (i.e., timing of- and size at- hatching and first feeding [FF]). We predicted that egg size would differ among morphs and be less variable as morphs diverge away from the ancestral anadromous phenotype. We also predicted that egg size would correlate with offspring size and developmental timing. We found morphs had different egg size, developmental timing, and size at hatching and FF. Egg size increased as phenotypic proximity to the ancestral anadromous phenotype decreased, with larger eggs generally giving rise to larger offspring, especially at FF, but egg size had no effect on developmental rate. The interaction between egg size and the environment may have a profound impact on offspring fitness, where the resulting differences in early life-history traits may act to initiate and/or maintain resource morphs diversification.
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Affiliation(s)
- Samantha V. Beck
- Department of Aquaculture and Fish BiologyHólar UniversitySauðárkrókurIceland,Institute of Life and Environmental SciencesUniversity of IcelandReykjavíkIceland
| | - Katja Räsänen
- Department of Aquatic EcologyEawag, Swiss Federal Institute of Aquatic Science and TechnologyDübendorfSwitzerland,Department of Biology and Environmental ScienceUniversity of JyväskyläJyväskyläFinland
| | | | - Skúli Skúlason
- Department of Aquaculture and Fish BiologyHólar UniversitySauðárkrókurIceland,Icelandic Museum of Natural HistoryReykjavíkIceland
| | - Zophonías O. Jónsson
- Institute of Life and Environmental SciencesUniversity of IcelandReykjavíkIceland
| | - Markos Tsinganis
- Department of Aquatic EcologyEawag, Swiss Federal Institute of Aquatic Science and TechnologyDübendorfSwitzerland
| | - Camille A. Leblanc
- Department of Aquaculture and Fish BiologyHólar UniversitySauðárkrókurIceland
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19
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Rainville V, Dupuch A, Pépino M, Magnan P. Intraspecific competition and temperature drive habitat-based resource polymorphism in brook charr, Salvelinus fontinalis. Evol Ecol 2022. [DOI: 10.1007/s10682-022-10212-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
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20
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La Fortezza M, Rendueles O, Keller H, Velicer GJ. Hidden paths to endless forms most wonderful: ecology latently shapes evolution of multicellular development in predatory bacteria. Commun Biol 2022; 5:977. [PMID: 36114258 PMCID: PMC9481553 DOI: 10.1038/s42003-022-03912-w] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2021] [Accepted: 08/30/2022] [Indexed: 11/09/2022] Open
Abstract
AbstractEcological causes of developmental evolution, for example from predation, remain much investigated, but the potential importance of latent phenotypes in eco-evo-devo has received little attention. Using the predatory bacterium Myxococcus xanthus, which undergoes aggregative fruiting body development upon starvation, we tested whether adaptation to distinct growth environments that do not induce development latently alters developmental phenotypes under starvation conditions that do induce development. In an evolution experiment named MyxoEE-3, growing M. xanthus populations swarmed across agar surfaces while adapting to conditions varying at factors such as surface stiffness or prey identity. Such ecological variation during growth was found to greatly impact the latent evolution of development, including fruiting body morphology, the degree of morphological trait correlation, reaction norms, degrees of developmental plasticity and stochastic diversification. For example, some prey environments promoted retention of developmental proficiency whereas others led to its systematic loss. Our results have implications for understanding evolutionary interactions among predation, development and motility in myxobacterial life cycles, and, more broadly, how ecology can profoundly shape the evolution of developmental systems latently rather than by direct selection on developmental features.
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21
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Fang B, Momigliano P, Kahilainen KK, Merilä J. Allopatric origin of sympatric whitefish morphs with insights on the genetic basis of their reproductive isolation. Evolution 2022; 76:1905-1913. [PMID: 35797649 DOI: 10.1111/evo.14559] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/16/2021] [Revised: 06/13/2022] [Accepted: 06/22/2022] [Indexed: 01/22/2023]
Abstract
The European whitefish (Coregonus lavaretus) species complex is a classic example of recent adaptive radiation. Here, we examine a whitefish population introduced to northern Finnish Lake Tsahkal in the late 1960s, where three divergent morphs (viz. littoral, pelagic, and profundal feeders) were found 10 generations after. Using demographic modeling based on genomic data, we show that whitefish morphs evolved during a phase of strict isolation, refuting a rapid sympatric divergence scenario. The lake is now an artificial hybrid zone between morphs originated in allopatry. Despite their current syntopy, clear genetic differentiation remains between two of the three morphs. Using admixture mapping, we identify five SNPs associated with gonad weight variation, a proxy for sexual maturity and spawning time. We suggest that ecological adaptations in spawning time evolved in allopatry are currently maintaining partial reproductive isolation in the absence of other barriers to gene flow.
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Affiliation(s)
- Bohao Fang
- Ecological Genetics Research Unit, Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, 00014, Finland.,Department of Organismic and Evolutionary Biology and Museum of Comparative Zoology, Harvard University, Cambridge, Massachusetts, 02138, USA
| | - Paolo Momigliano
- Ecological Genetics Research Unit, Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, 00014, Finland.,Department of Biochemistry, Genetics, and Immunology, Universidade de Vigo, Vigo, 36310, Spain
| | - Kimmo K Kahilainen
- Lammi Biological Station, University of Helsinki, Lammi, 16900, Finland.,Kilpisjärvi Biological Station, University of Helsinki, Kilpisjärvi, 99490, Finland
| | - Juha Merilä
- Ecological Genetics Research Unit, Organismal and Evolutionary Biology Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, 00014, Finland.,Area of Ecology and Biodiversity, School of Biological Sciences, The University of Hong Kong, Pok Fu Lam, Hong Kong
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22
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Andersson ML, Scharnweber K, Eklöv P. The interaction between metabolic rate, habitat choice, and resource use in a polymorphic freshwater species. Ecol Evol 2022; 12:e9129. [PMID: 35923943 PMCID: PMC9339753 DOI: 10.1002/ece3.9129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2021] [Revised: 06/23/2022] [Accepted: 06/27/2022] [Indexed: 11/12/2022] Open
Abstract
Resource polymorphism is common across taxa and can result in alternate ecotypes with specific morphologies, feeding modes, and behaviors that increase performance in a specific habitat. This can result in high intraspecific variation in the expression of specific traits and the extent to which these traits are correlated within a single population. Although metabolic rate influences resource acquisition and the overall pace of life of individuals it is not clear how metabolic rate interacts with the larger suite of traits to ultimately determine individual fitness.We examined the relationship between metabolic rates and the major differences (habitat use, morphology, and resource use) between littoral and pelagic ecotypes of European perch (Perca fluviatilis) from a single lake in Central Sweden.Standard metabolic rate (SMR) was significantly higher in pelagic perch but did not correlate with resource use or morphology. Maximum metabolic rate (MMR) was not correlated with any of our explanatory variables or with SMR. Aerobic scope (AS) showed the same pattern as SMR, differing across habitats, but contrary to expectations, was lower in pelagic perch.This study helps to establish a framework for future experiments further exploring the drivers of intraspecific differences in metabolism. In addition, since metabolic rates scale with temperature and determine predator energy requirements, our observed differences in SMR across habitats will help determine ecotype-specific vulnerabilities to climate change and differences in top-down predation pressure across habitats.
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Affiliation(s)
- Matilda L. Andersson
- Department of Ecology and GeneticsUppsala UniversityUppsalaSweden
- Department of Aquatic Sciences and AssessmentSwedish University of Agricultural SciencesUppsalaSweden
| | - Kristin Scharnweber
- Department of Ecology and GeneticsUppsala UniversityUppsalaSweden
- Department of Plant Ecology and Nature ConservationUniversity of PotsdamPotsdamGermany
| | - Peter Eklöv
- Department of Ecology and GeneticsUppsala UniversityUppsalaSweden
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23
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Hayden B, Harrod C, Thomas S, Kahilainen KK. Winter ecology of specialist and generalist morphs of European whitefish, Coregonus lavaretus, in subarctic northern Europe. JOURNAL OF FISH BIOLOGY 2022; 101:389-399. [PMID: 35142375 DOI: 10.1111/jfb.14999] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/09/2021] [Revised: 01/11/2022] [Accepted: 01/13/2022] [Indexed: 06/14/2023]
Abstract
European whitefish is a model species for adaptive radiation of fishes in temperate and subarctic lakes. In northern Europe the most commonly observed morphotypes are a generalist (LSR) morph and a pelagic specialist (DR) morph. The evolution of a pelagic specialist morph is something of an enigma, however, as this region is characterized by long, dark winters with pelagic primary production limited to a brief window in late summer. We conducted the first winter-based study of polymorphic whitefish populations to determine the winter ecology of both morphs, and we combined seasonal diet and stable isotope analysis with several proxies of condition in three polymorphic whitefish populations. The generalist LSR morph fed on benthic and pelagic prey in summer but was solely reliant on benthic prey in winter. This was associated with a noticeable but moderate reduction in condition, lipid content and stomach fullness in winter relative to summer. In contrast, the DR whitefish occupied a strict pelagic niche in both seasons. A significant reduction in pelagic prey during winter resulted in severe decrease in condition, lipid content and stomach fullness in DR whitefish in winter relative to summer, with the pelagic morph apparently approaching starvation in winter. We suggest that this divergent approach to seasonal foraging is associated with the divergent life-history traits of both morphs.
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Affiliation(s)
- Brian Hayden
- Canadian Rivers Institute, Biology Department, University of New Brunswick, Fredericton, Canada
- Kilpisjärvi Biological Station, University of Helsinki, Helsinki, Finland
| | - Chris Harrod
- Instituto de Ciencias Naturales Alexander Von Humboldt, Universidad de Antofagasta, Antofagasta, Chile
- Millennium Nucleus of Austral Invasive Salmonids, Concepción, Chile
| | | | - Kimmo K Kahilainen
- Kilpisjärvi Biological Station, University of Helsinki, Helsinki, Finland
- Lammi Biological Station, University of Helsinki, Helsinki, Finland
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24
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Euclide PT, Jasonowicz A, Sitar S, Fischer G, Goetz FW. Further evidence from common garden rearing experiments of heritable traits separating lean and siscowet lake charr (Salvelinus namaycush) ecotypes. Mol Ecol 2022; 31:3432-3450. [PMID: 35510796 PMCID: PMC9323484 DOI: 10.1111/mec.16492] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/15/2021] [Revised: 03/07/2022] [Accepted: 04/12/2022] [Indexed: 11/30/2022]
Abstract
Genetic evidence of selection for complex and polygenically regulated phenotypes can easily become masked by neutral population genetic structure and phenotypic plasticity. Without direct evidence of genotype‐phenotype associations it can be difficult to conclude to what degree a phenotype is heritable or a product of environment. Common garden laboratory studies control for environmental stochasticity and help to determine the mechanism that regulate traits. Here we assess lipid content, growth, weight, and length variation in full and hybrid F1 crosses of deep and shallow water sympatric lake charr ecotypes reared for nine years in a common garden experiment. Redundancy analysis (RDA) and quantitative‐trait‐loci (QTL) genomic scans are used to identify associations between genotypes at 19,714 single nucleotide polymorphisms (SNPs) aligned to the lake charr genome and individual phenotypes to determine the role that genetic inheritance plays in ecotype phenotypic diversity. Lipid content, growth, length, and weight differed significantly among lake charr crosses throughout the experiment suggesting that pedigree plays a large roll in lake charr development. Polygenic scores of 15 SNPs putatively associated with lipid content and/or condition factor indicated that ecotype distinguishing traits are polygenically regulated and additive. A QTL identified on chromosome 38 contained >200 genes, some of which were associated with lipid metabolism and growth, demonstrating the complex nature of ecotype diversity. The results of our common garden study further indicate that lake charr ecotypes observed in nature are predetermined at birth and that ecotypes differ fundamentally in lipid metabolism and growth.
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Affiliation(s)
- P T Euclide
- Purdue University, Department of Forestry and Natural Resources, West Lafayette, IN, 47907, USA
| | - A Jasonowicz
- The International Halibut Commission, 2320 West Commodore Way, Suite 300, Seattle, WA, 98199-1287, USA
| | - S Sitar
- Michigan Department of Natural Resources, Marquette Fisheries Research Station, 484 Cherry Creek Rd., Marquette, MI, 49855, USA
| | - G Fischer
- University of Wisconsin-Stevens Point, Northern Aquaculture Demonstration Facility, 36445 State Hwy 13, Bayfield, WI, 54814, USA
| | - F W Goetz
- University of Wisconsin - Milwaukee, School of Freshwater Sciences, 600 East Greenfield Ave., Milwaukee, WI, 53204, USA
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25
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McWhinnie K, Gibson J, Gislason M, Tanner E, Windmill J, Albertson RC, Parsons K. Assessing the Levels of Functional Adaptation: Finite Element Analysis Reveals Species, Hybrid, and Sexual Variation in the Biomechanics of African Cichlid Mandibles. Evol Biol 2022. [DOI: 10.1007/s11692-022-09566-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
AbstractTo understand how adaptive divergence emerges it is essential to examine the function of phenotypic traits along a continuum. For vertebrates, the mandible provides a key link with foraging and other important activities which has made it highly relevant for investigations of biomechanical change. Variation in mandible shape is known to correspond with ecology but its function is often only investigated between distinct species. However, for such divergence to occur and be maintained selection likely draws from many sources of biomechanical variation. African cichlids represent an exemplar model for understanding how such processes unfold with mandible variation existing between species, sexes, and is likely generated in nature by the potential for hybridization. We explored such mandible variation through a finite element modelling approach and predicted that hybrids and females would have reduced functional capabilities, the former in line with disruptive selection and the latter due to potential trade-offs incurred by maternal mouthbrooding in Malawian haplochromines. We revealed evidence of structural adaptations between Tropheops ‘Red Cheek’ and Labeotrophues fuelleborni that impacted the dispersion of mechanical stress in ways that matched the foraging of these species. Also, hybrids showed higher stresses relative to both species across the mandible. Sexual dimorphism in stress handling was evident despite minor differences in shape with males showing enhanced load resistance. However, in hybrids it appeared that males were disadvantaged relative to females, and displayed asymmetry in load handling. Together, these results show evidence of species and sex based biomechanical variation, that could be targeted by divergent selection.
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26
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Markevich GN, Izvekova EI, Anisimova LA, Mugue NS, Bonk TV, Esin EV. Annual Temperatures and Dynamics of Food Availability are Associated with the Pelagic-Benthic Diversification in a Sympatric Pair of Salmonid Fish. Evol Biol 2022. [DOI: 10.1007/s11692-022-09560-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
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Thambithurai D, Rácz A, Lindström J, Parsons KJ, Killen SS. Simulated trapping and trawling exert similar selection on fish morphology. Ecol Evol 2022; 12:e8596. [PMID: 35169454 PMCID: PMC8840878 DOI: 10.1002/ece3.8596] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2021] [Revised: 01/12/2022] [Accepted: 01/13/2022] [Indexed: 11/20/2022] Open
Abstract
Commercial fishery harvest can influence the evolution of wild fish populations. Our knowledge of selection on morphology is however limited, with most previous studies focusing on body size, age, and maturation. Within species, variation in morphology can influence locomotor ability, possibly making some individuals more vulnerable to capture by fishing gears. Additionally, selection on morphology has the potential to influence other foraging, behavioral, and life-history related traits. Here we carried out simulated fishing using two types of gears: a trawl (an active gear) and a trap (a passive gear), to assess morphological trait-based selection in relation to capture vulnerability. Using geometric morphometrics, we assessed differences in shape between high and low vulnerability fish, showing that high vulnerability individuals display shallower body shapes regardless of gear type. For trawling, low vulnerability fish displayed morphological characteristics that may be associated with higher burst-swimming, including a larger caudal region and narrower head, similar to evolutionary responses seen in fish populations responding to natural predation. Taken together, these results suggest that divergent selection can lead to phenotypic differences in harvested fish populations.
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Affiliation(s)
- Davide Thambithurai
- Institute of Biodiversity, Animal Health and Comparative MedicineUniversity of GlasgowGlasgowUK
| | - Anita Rácz
- Department of GeneticsELTE Eötvös Loránd UniversityBudapestHungary
| | - Jan Lindström
- Institute of Biodiversity, Animal Health and Comparative MedicineUniversity of GlasgowGlasgowUK
| | - Kevin J. Parsons
- Institute of Biodiversity, Animal Health and Comparative MedicineUniversity of GlasgowGlasgowUK
| | - Shaun S. Killen
- Institute of Biodiversity, Animal Health and Comparative MedicineUniversity of GlasgowGlasgowUK
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28
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OUP accepted manuscript. Hum Reprod Update 2022; 28:457-479. [DOI: 10.1093/humupd/dmac014] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2021] [Revised: 02/17/2022] [Indexed: 11/12/2022] Open
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Salisbury SJ, Ruzzante DE. Genetic Causes and Consequences of Sympatric Morph Divergence in Salmonidae: A Search for Mechanisms. Annu Rev Anim Biosci 2021; 10:81-106. [PMID: 34758272 DOI: 10.1146/annurev-animal-051021-080709] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
Repeatedly and recently evolved sympatric morphs exhibiting consistent phenotypic differences provide natural experimental replicates of speciation. Because such morphs are observed frequently in Salmonidae, this clade provides a rare opportunity to uncover the genomic mechanisms underpinning speciation. Such insight is also critical for conserving salmonid diversity, the loss of which could have significant ecological and economic consequences. Our review suggests that genetic differentiation among sympatric morphs is largely nonparallel apart from a few key genes that may be critical for consistently driving morph differentiation. We discuss alternative levels of parallelism likely underlying consistent morph differentiation and identify several factors that may temper this incipient speciation between sympatric morphs, including glacial history and contemporary selective pressures. Our synthesis demonstrates that salmonids are useful for studying speciation and poses additional research questions to be answered by future study of this family. Expected final online publication date for the Annual Review of Animal Biosciences, Volume 10 is February 2022. Please see http://www.annualreviews.org/page/journal/pubdates for revised estimates.
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Affiliation(s)
- S J Salisbury
- Department of Biology, Dalhousie University, Halifax, Nova Scotia, Canada; ,
| | - D E Ruzzante
- Department of Biology, Dalhousie University, Halifax, Nova Scotia, Canada; ,
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Lafuente E, Lürig MD, Rövekamp M, Matthews B, Buser C, Vorburger C, Räsänen K. Building on 150 Years of Knowledge: The Freshwater Isopod Asellus aquaticus as an Integrative Eco-Evolutionary Model System. Front Ecol Evol 2021. [DOI: 10.3389/fevo.2021.748212] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/01/2023] Open
Abstract
Interactions between organisms and their environments are central to how biological diversity arises and how natural populations and ecosystems respond to environmental change. These interactions involve processes by which phenotypes are affected by or respond to external conditions (e.g., via phenotypic plasticity or natural selection) as well as processes by which organisms reciprocally interact with the environment (e.g., via eco-evolutionary feedbacks). Organism-environment interactions can be highly dynamic and operate on different hierarchical levels, from genes and phenotypes to populations, communities, and ecosystems. Therefore, the study of organism-environment interactions requires integrative approaches and model systems that are suitable for studies across different hierarchical levels. Here, we introduce the freshwater isopod Asellus aquaticus, a keystone species and an emerging invertebrate model system, as a prime candidate to address fundamental questions in ecology and evolution, and the interfaces therein. We review relevant fields of research that have used A. aquaticus and draft a set of specific scientific questions that can be answered using this species. Specifically, we propose that studies on A. aquaticus can help understanding (i) the influence of host-microbiome interactions on organismal and ecosystem function, (ii) the relevance of biotic interactions in ecosystem processes, and (iii) how ecological conditions and evolutionary forces facilitate phenotypic diversification.
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Esin EV, Markevich GN, Melnik NO, Zlenko DV, Shkil FN. Ambient temperature as a factor contributing to the developmental divergence in sympatric salmonids. PLoS One 2021; 16:e0258536. [PMID: 34653206 PMCID: PMC8519426 DOI: 10.1371/journal.pone.0258536] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2021] [Accepted: 09/29/2021] [Indexed: 12/01/2022] Open
Abstract
Factors and mechanisms promoting resource-based radiation in animals still represent a main challenge to evolutionary biology. The modifications of phenotype tied with adaptive diversification may result from an environmentally related shift having occurred at the early stage of development. Here, we study the role of temperature dynamics on the reproductive sites in the early-life divergence and adaptive radiation of the salmonid fish Salvelinus malma dwelling in the Lake Kronotskoe basin (North-East Asia). Local sympatric charr ecomorphs demonstrate strict homing behaviour guiding the preordained distribution along tributaries and, hence, further development under different temperatures. We thoroughly assessed the annual temperature dynamics at the spawning grounds of each morph as compared to an ancestral anadromous morph. Then we carried out an experimental rearing of both under naturally diverging and uniformed temperatures. To compare the morphs' development under the dynamically changing temperatures, we have designed a method based on calculating the accumulated heat by the Arrhenius equation. The proposed equation shows a strong predictive power and, at the same time, is not bias-susceptible when the developmental temperature approximates 0°C. The temperature was found to significantly affect the charrs' early ontogeny, which underlies the divergence of developmental and growth rates between the morphs, as well as morph-specific ontogenetic adaptations to the spawning site's temperatures. As opposed to the endemic morphs from Lake Kronotskoe, the anadromous S. malma, being unexposed to selection оn highly specific reproduction conditions, showed a wide temperature tolerance, Our findings demonstrate that the hatch, onset timing of external feeding, and size dissimilarities between the sympatric morphs reveal themselves during the development under contrast temperatures. As a result of the observed developmental disparities, the morphs occupy specific definitive foraging niches in the lake.
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Affiliation(s)
- Evgeny V. Esin
- A.N. Severtsov Institute of Ecology and Evolution RAS, Moscow, Russian Federation
| | | | - Nikolai O. Melnik
- A.N. Severtsov Institute of Ecology and Evolution RAS, Moscow, Russian Federation
| | | | - Fedor N. Shkil
- A.N. Severtsov Institute of Ecology and Evolution RAS, Moscow, Russian Federation
- Koltzov Institute of Developmental Biology RAS, Moscow, Russian Federation
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Garita-Alvarado CA, Garduño-Sánchez MA, Barluenga M, Ornelas-García CP. Genetic and ecomorphological divergence between sympatric Astyanax morphs from Central America. J Evol Biol 2021; 34:1752-1766. [PMID: 34545659 DOI: 10.1111/jeb.13933] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/23/2020] [Revised: 08/11/2021] [Accepted: 09/06/2021] [Indexed: 11/27/2022]
Abstract
Intraspecific ecological and morphological polymorphism can promote ecological speciation and the build-up of reproductive isolation. Here, we evaluate correlations among morphology, trophic ecology and genetic differentiation between two divergent morphs (elongate and deep-body) of the fish genus Astyanax in the San Juan River basin in Central America, to infer the putative evolutionary mechanism shaping this system. We collected the two morphs from three water bodies and analysed: (1) the correlation between body shape and the shape of the premaxilla, a relevant trophic morphological structure, (2) the trophic level and niche width of each morph, (3) the correspondence between trophic level and body and premaxillary shape, and (4) the genetic differentiation between morphs using mitochondrial and nuclear markers. We found a strong correlation between the body and premaxillary shape of the morphs. The elongate-body morph had a streamlined body, a premaxilla with acuter angles and a narrower ascending process, and a higher trophic level, characteristic of species with predatorial habits. By contrast, the deep-body morph had a higher body depth, a premaxilla with less acute angles and a broader trophic niche, suggesting generalist habits. Despite the strong correlation between morphological and ecological divergence, the morphs showed limited genetic differentiation, supporting the idea that morphs may be undergoing incipient ecological speciation, although alternative scenarios such as stable polymorphism or plasticity should also be considered. This study provides support for the role of ecological factors promoting diversification in both lake and stream-dwelling freshwater fish.
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Affiliation(s)
- Carlos A Garita-Alvarado
- Departamento de Zoología, Instituto de Biología, Universidad Nacional Autónoma de México, México City, México.,Posgrado en Ciencias Biológicas, Universidad Nacional Autónoma de México, México City, México
| | - Marco Antonio Garduño-Sánchez
- Departamento de Zoología, Instituto de Biología, Universidad Nacional Autónoma de México, México City, México.,Posgrado en Ciencias Biológicas, Universidad Nacional Autónoma de México, México City, México
| | - Marta Barluenga
- Departament of Biodiversity and Evolutionary Biology, Museo Nacional de Ciencias Naturales, CSIC, Madrid, Spain
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Rainville V, Pépino M, Magnan P. Parallel evolution of morphological traits and body shape in littoral and pelagic brook charr, Salvelinus fontinalis, along a gradient of interspecific competition. Oecologia 2021; 197:421-436. [PMID: 34524544 DOI: 10.1007/s00442-021-05028-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/01/2020] [Accepted: 08/25/2021] [Indexed: 11/26/2022]
Abstract
The parallel evolution of similar ecotypes in response to comparable environmental conditions is believed to reveal the importance of divergent selection in phenotypic diversifying processes. Systems characterized by the presence of multiple replicate populations expressing resource polymorphism thus provide an ideal opportunity to address the occurrence and factors affecting the parallel evolution of ecotypes. Previous studies have shown that brook charr (Salvelinus fontinalis) exhibit resource polymorphism in some Canadian Shield lakes, where a littoral ecotype feeds mainly on zoobenthos and a pelagic ecotype feeds mostly on zooplankton. Using morphological traits and geometric morphometric analyses on 18 native brook charr populations, we explicitly tested (i) whether brook charr ecotypes show parallel evolution across populations (i.e. the same morphological traits discriminate ecotypes among lakes) and (ii) whether interspecific competition decreases the amplitude of morphological differentiation between ecotypes, if any, because brook charr experience some level of competitive exclusion from the littoral habitat in the presence of creek chub or white sucker. We observed a low level of parallel evolution, where the littoral ecotype was overall stouter with longer fins and smaller eyes than the pelagic ecotype. Interspecific competition had no clear impacts on the amplitude of morphological differentiation. We also observed that inter-lake morphological differences are greater than between ecotypes within lakes, suggesting an important effect of local environmental factors on population morphology. Early-stage of diversification as well as phenotypic plasticity and morphological integration could explain why resource polymorphism is still subtle in brook charr populations.
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Affiliation(s)
- Vincent Rainville
- Research Centre for Watershed-Aquatic Ecosystem Interactions, Université du Québec à Trois-Rivières, C. P. 500, Trois-Rivières, QC, G9A 5H7, Canada
| | - Marc Pépino
- Research Centre for Watershed-Aquatic Ecosystem Interactions, Université du Québec à Trois-Rivières, C. P. 500, Trois-Rivières, QC, G9A 5H7, Canada
| | - Pierre Magnan
- Research Centre for Watershed-Aquatic Ecosystem Interactions, Université du Québec à Trois-Rivières, C. P. 500, Trois-Rivières, QC, G9A 5H7, Canada.
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Horta-Lacueva QJB, Snorrason SS, Morrissey MB, Leblanc CAL, Kapralova KH. Multivariate analysis of morphology, behaviour, growth and developmental timing in hybrids brings new insights into the divergence of sympatric Arctic charr morphs. BMC Ecol Evol 2021; 21:170. [PMID: 34493202 PMCID: PMC8422654 DOI: 10.1186/s12862-021-01904-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2021] [Accepted: 08/18/2021] [Indexed: 11/16/2022] Open
Abstract
BACKGROUND Studying the development of fitness related traits in hybrids from populations diverging in sympatry is a fundamental approach to understand the processes of speciation. However, such traits are often affected by covariance structures that complicate the comprehension of these processes, especially because the interactive relationships between traits of different nature (e.g. morphology, behaviour, life-history) remain largely unknown in this context. In a common garden setup, we conducted an extensive examination of a large suit of traits putatively involved in the divergence of two morphs of Arctic charr (Salvelinus alpinus), and investigated the consequences of potential patterns of trait covariance on the phenotype of their hybrids. These traits were measured along ontogeny and involved growth, yolk sac resorption, developmental timing (hatching and the onset of exogeneous feeding), head morphology and feeding behaviour. RESULTS Growth trajectories provided the strongest signal of phenotypic divergence between the two charr. Strikingly, the first-generation hybrids did not show intermediate nor delayed growth but were similar to the smallest morph, suggesting parental biases in the inheritance of growth patterns. However, we did not observe extensive multivariate trait differences between the two morphs and their hybrids. Growth was linked to head morphology (suggesting that morphological variations in early juveniles relate to simple allometric effects) but this was the only strong signal of covariance observed between all the measured traits. Furthermore, we did not report evidence for differences in overall phenotypic variance between morphs, nor for enhanced phenotypic variability in their hybrids. CONCLUSION Our study shed light on the multivariate aspect of development in a context of adaptive divergence. The lack of evidence for the integration of most traits into a single covariance structure suggested that phenotypic constraints may not always favour nor impede divergence toward ecological niches differing in numerous physical and ecological variables, as observed in the respective habitats of the two charr. Likewise, the role of hybridization as a disruptive agent of trait covariance may not necessarily be significant in the evolution of populations undergoing resource polymorphism.
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Affiliation(s)
- Quentin J-B Horta-Lacueva
- Institute of Life and Environmental Sciences, University of Iceland, Askja - Náttúrufræðihús, Sturlugötu 7, 102, Reykjavík, Iceland.
| | - Sigurður S Snorrason
- Institute of Life and Environmental Sciences, University of Iceland, Askja - Náttúrufræðihús, Sturlugötu 7, 102, Reykjavík, Iceland
| | - Michael B Morrissey
- School of Biology, University of St Andrews, Sir Harold Mitchell Building, Greenside Place, St Andrews, UK
| | - Camille A-L Leblanc
- Department of Aquaculture and Fish Biology, Hólar University, Háeyri 1, 550, Sauðárkrókur, Iceland
| | - Kalina H Kapralova
- Institute of Life and Environmental Sciences, University of Iceland, Askja - Náttúrufræðihús, Sturlugötu 7, 102, Reykjavík, Iceland
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35
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Clemens BJ, Schreck CB. An assessment of terminology for intraspecific diversity in fishes, with a focus on "ecotypes" and "life histories". Ecol Evol 2021; 11:10772-10793. [PMID: 34429881 PMCID: PMC8366897 DOI: 10.1002/ece3.7884] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2021] [Revised: 06/03/2021] [Accepted: 06/23/2021] [Indexed: 12/15/2022] Open
Abstract
Understanding and preserving intraspecific diversity (ISD) is important for species conservation. However, ISD units do not have taxonomic standards and are not universally recognized. The terminology used to describe ISD is varied and often used ambiguously. We compared definitions of terms used to describe ISD with use in recent studies of three fish taxa: sticklebacks (Gasterosteidae), Pacific salmon and trout (Oncorhynchus spp., "PST"), and lampreys (Petromyzontiformes). Life history describes the phenotypic responses of organisms to environments and includes biological parameters that affect population growth or decline. Life-history pathway(s) are the result of different organismal routes of development that can result in different life histories. These terms can be used to describe recognizable life-history traits. Life history is generally used in organismal- and ecology-based journals. The terms paired species/species pairs have been used to describe two different phenotypes, whereas in some species and situations a continuum of phenotypes may be expressed. Our review revealed overlapping definitions for race and subspecies, and subspecies and ecotypes. Ecotypes are genotypic adaptations to particular environments, and this term is often used in genetic- and evolution-based journals. "Satellite species" is used for situations in which a parasitic lamprey yields two or more derived, nonparasitic lamprey species. Designatable Units, Evolutionary Significant Units (ESUs), and Distinct Population Segments (DPS) are used by some governments to classify ISD of vertebrate species within distinct and evolutionary significant criteria. In situations where the genetic or life-history components of ISD are not well understood, a conservative approach would be to call them phenotypes.
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Affiliation(s)
| | - Carl B. Schreck
- Department of Fisheries and WildlifeOregon State UniversityCorvallisORUSA
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36
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Campbell CS, Adams CE, Bean CW, Pilakouta N, Parsons KJ. Evolvability under climate change: Bone development and shape plasticity are heritable and correspond with performance in Arctic charr (Salvelinus alpinus). Evol Dev 2021; 23:333-350. [PMID: 34010514 DOI: 10.1111/ede.12379] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2020] [Revised: 03/18/2021] [Accepted: 03/28/2021] [Indexed: 01/29/2023]
Abstract
Environmental conditions can impact the development of phenotypes and in turn the performance of individuals. Climate change, therefore, provides a pressing need to extend our understanding of how temperature will influence phenotypic variation. To address this, we assessed the impact of increased temperatures on ecologically significant phenotypic traits in Arctic charr (Salvelinus alpinus). We raised Arctic charr at 5°C and 9°C to simulate a predicted climate change scenario and examined temperature-induced variation in ossification, bone metabolism, skeletal morphology, and escape response. Fish reared at 9°C exhibited less cartilage and bone development at the same developmental stage, but also higher bone metabolism in localized regions. The higher temperature treatment also resulted in significant differences in craniofacial morphology, changes in the degree of variation, and fewer vertebrae. Both temperature regime and vertebral number affected escape response performance, with higher temperature leading to decreased latency. These findings demonstrate that climate change has the potential to impact development through multiple routes with the potential for plasticity and the release of cryptic genetic variation to have strong impacts on function through ecological performance and survival.
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Affiliation(s)
- Calum S Campbell
- Institute of Biodiversity, Animal Health, and Comparative Medicine, University of Glasgow, Glasgow, UK
| | - Colin E Adams
- Institute of Biodiversity, Animal Health, and Comparative Medicine, University of Glasgow, Glasgow, UK
| | - Colin W Bean
- Institute of Biodiversity, Animal Health, and Comparative Medicine, University of Glasgow, Glasgow, UK.,NatureScot, Clydebank, UK
| | - Natalie Pilakouta
- Institute of Biodiversity, Animal Health, and Comparative Medicine, University of Glasgow, Glasgow, UK.,School of Biological Sciences, University of Aberdeen, Aberdeen, UK
| | - Kevin J Parsons
- Institute of Biodiversity, Animal Health, and Comparative Medicine, University of Glasgow, Glasgow, UK
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37
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Animal personality adds complexity to the processes of divergence between sympatric morphs of Arctic charr. Anim Behav 2021. [DOI: 10.1016/j.anbehav.2021.02.022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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Grummer JA, Whitlock MC, Schulte PM, Taylor EB. Growth genes are implicated in the evolutionary divergence of sympatric piscivorous and insectivorous rainbow trout (Oncorhynchus mykiss). BMC Ecol Evol 2021; 21:63. [PMID: 33888062 PMCID: PMC8063319 DOI: 10.1186/s12862-021-01795-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/25/2021] [Accepted: 04/12/2021] [Indexed: 12/26/2022] Open
Abstract
Background Identifying ecologically significant phenotypic traits and the genomic mechanisms that underly them are crucial steps in understanding traits associated with population divergence. We used genome-wide data to identify genomic regions associated with key traits that distinguish two ecomorphs of rainbow trout (Oncorhynchus mykiss)—insectivores and piscivores—that coexist for the non-breeding portion of the year in Kootenay Lake, southeastern British Columbia. “Gerrards” are large-bodied, rapidly growing piscivores with high metabolic rates that spawn north of Kootenay Lake in the Lardeau River, in contrast to the insectivorous populations that are on average smaller in body size, with lower growth and metabolic rates, mainly forage on aquatic insects, and spawn in tributaries immediately surrounding Kootenay Lake. We used pool-seq data representing ~ 60% of the genome and 80 fish per population to assess the level of genomic divergence between ecomorphs and to identify and interrogate loci that may play functional or selective roles in their divergence. Results Genomic divergence was high between sympatric insectivores and piscivores (\documentclass[12pt]{minimal}
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\begin{document}$$F_{\text{ST}}$$\end{document}FST = 0.188), and in fact higher than between insectivorous populations from Kootenay Lake and the Blackwater River (\documentclass[12pt]{minimal}
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\begin{document}$$F_{\text{ST}}$$\end{document}FST = 0.159) that are > 500 km apart. A window-based \documentclass[12pt]{minimal}
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\begin{document}$$F_{\text{ST}}$$\end{document}FST analysis did not reveal “islands” of genomic differentiation; however, the window with highest \documentclass[12pt]{minimal}
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\begin{document}$$F_{\text{ST}}$$\end{document}FST estimate did include a gene associated with insulin secretion. Although we explored the use of the “Local score” approach to identify genomic outlier regions, this method was ultimately not used because simulations revealed a high false discovery rate (~ 20%). Gene ontology (GO) analysis identified several growth processes as enriched in genes occurring in the ~ 200 most divergent genomic windows, indicating many loci of small effect involved in growth and growth-related metabolic processes are associated with the divergence of these ecomorphs. Conclusion Our results reveal a high degree of genomic differentiation between piscivorous and insectivorous populations and indicate that the large body piscivorous phenotype is likely not due to one or a few loci of large effect. Rather, the piscivore phenotype may be controlled by several loci of small effect, thus highlighting the power of whole-genome resequencing in identifying genomic regions underlying population-level phenotypic divergences. Supplementary Information The online version contains supplementary material available at 10.1186/s12862-021-01795-9.
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Affiliation(s)
- Jared A Grummer
- Department of Zoology and Biodiversity Research Centre, University of British Columbia, 6270 University Blvd., Vancouver, BC, V6T 1Z4, Canada.
| | - Michael C Whitlock
- Department of Zoology and Biodiversity Research Centre, University of British Columbia, 6270 University Blvd., Vancouver, BC, V6T 1Z4, Canada
| | - Patricia M Schulte
- Department of Zoology and Biodiversity Research Centre, University of British Columbia, 6270 University Blvd., Vancouver, BC, V6T 1Z4, Canada
| | - Eric B Taylor
- Department of Zoology and Biodiversity Research Centre, University of British Columbia, 6270 University Blvd., Vancouver, BC, V6T 1Z4, Canada.,Beaty Biodiversity Museum, University of British Columbia, 6270 University Blvd., Vancouver, BC, V6T 1Z4, Canada
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Chavarie L, Voelker S, Hansen MJ, Bronte CR, Muir AM, Zimmerman MS, Krueger CC. Temporal instability of lake charr phenotypes: Synchronicity of growth rates and morphology linked to environmental variables? Evol Appl 2021; 14:1159-1177. [PMID: 33897827 PMCID: PMC8061271 DOI: 10.1111/eva.13188] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2020] [Revised: 11/23/2020] [Accepted: 11/24/2020] [Indexed: 12/24/2022] Open
Abstract
Pathways through which phenotypic variation among individuals arise can be complex. One assumption often made in relation to intraspecific diversity is that the stability or predictability of the environment will interact with expression of the underlying phenotypic variation. To address biological complexity below the species level, we investigated variability across years in morphology and annual growth increments between and within two sympatric lake charr Salvelinus namaycush ecotypes in Rush Lake, USA. A rapid phenotypic shift in body and head shape was found within a decade. The magnitude and direction of the observed phenotypic change were consistent in both ecotypes, which suggests similar pathways caused the variation over time. Over the same time period, annual growth increments declined for both lake charr ecotypes and corresponded with a consistent phenotypic shift of each ecotype. Despite ecotype-specific annual growth changes in response to winter conditions, the observed annual growth shift for both ecotypes was linked, to some degree, with variation in the environment. Particularly, a declining trend in regional cloud cover was associated with an increase of early-stage (ages 1-3) annual growth for lake charr of Rush Lake. Underlying mechanisms causing changes in growth rates and constrained morphological modulation are not fully understood. An improved knowledge of the biology hidden within the expression of phenotypic variation promises to clarify our understanding of temporal morphological diversity and instability.
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Affiliation(s)
- Louise Chavarie
- Faculty of Environmental Sciences and Natural Resource ManagementNorwegian University of Life SciencesÅsNorway
- Beaty Biodiversity Research CenterUniversity of British ColumbiaVancouverBCCanada
- Scottish Centre for Ecology and the Natural EnvironmentIBAHCM, Rowardennan, Loch LomondGlasgowUK
| | - Steve Voelker
- SUNY College of Environmental Science and ForestrySyracuseNYUSA
| | | | - Charles R. Bronte
- U.S. Fish and Wildlife ServiceGreen Bay Fish and Wildlife Conservation OfficeNew FrankenWIUSA
| | | | | | - Charles C. Krueger
- Department of Fisheries and WildlifeCenter for Systems Integration and SustainabilityMichigan State UniversityEast LansingMIUSA
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de Meo I, Østbye K, Kahilainen KK, Hayden B, Fagertun CHH, Poléo ABS. Predator community and resource use jointly modulate the inducible defense response in body height of crucian carp. Ecol Evol 2021; 11:2072-2085. [PMID: 33717443 PMCID: PMC7920785 DOI: 10.1002/ece3.7176] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/29/2020] [Revised: 12/15/2020] [Accepted: 12/17/2020] [Indexed: 11/23/2022] Open
Abstract
Phenotypic plasticity can be expressed as changes in body shape in response to environmental variability. Crucian carp (Carassius carassius), a widespread cyprinid, displays remarkable plasticity in body morphology and increases body depth when exposed to cues from predators, suggesting the triggering of an antipredator defense mechanism. However, these morphological changes could also be related to resource use and foraging behavior, as an indirect effect of predator presence. In order to determine whether phenotypic plasticity in crucian carp is driven by a direct or indirect response to predation threat, we compared twelve fish communities inhabiting small lakes in southeast Norway grouped by four categories of predation regimes: no predator fish, or brown trout (Salmo trutta), perch (Perca fluviatilis), or pike (Esox lucius) as main piscivores. We predicted the body shape of crucian carp to be associated with the species composition of predator communities and that the presence of efficient piscivores would result in a deeper body shape. We use stable isotope analyses to test whether this variation in body shape was related to a shift in individual resource use-that is, littoral rather than pelagic resource use would favor the development of a specific body shape-or other environmental characteristics. The results showed that increasingly efficient predator communities induced progressively deeper body shape, larger body size, and lower population densities. Predator maximum gape size and individual trophic position were the best variables explaining crucian carp variation in body depth among predation categories, while littoral resource use did not have a clear effect. The gradient in predation pressure also corresponded to a shift in lake productivity. These results indicate that crucian carp have a fine-tuned morphological defense mechanism against predation risk, triggered by the combined effect of predator presence and resource availability.
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Affiliation(s)
- Ilaria de Meo
- Department of Forestry and Wildlife ManagementInland Norway University of Applied SciencesKoppangNorway
| | - Kjartan Østbye
- Department of Forestry and Wildlife ManagementInland Norway University of Applied SciencesKoppangNorway
| | | | - Brian Hayden
- Biology DepartmentCanadian Rivers InstituteUniversity of New BrunswickFrederictonNBCanada
| | - Christian H. H. Fagertun
- Department of Forestry and Wildlife ManagementInland Norway University of Applied SciencesKoppangNorway
| | - Antonio B. S. Poléo
- Department of Forestry and Wildlife ManagementInland Norway University of Applied SciencesKoppangNorway
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Rainville V, Filion A, Lussier I, Pépino M, Magnan P. Does ecological release from distantly related species affect phenotypic divergence in brook charr? Oecologia 2021; 195:77-92. [PMID: 33521849 DOI: 10.1007/s00442-020-04822-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2019] [Accepted: 12/04/2020] [Indexed: 11/26/2022]
Abstract
Ecological opportunity occurs when a resource becomes available through a decrease of interspecific competition and another species colonizes the vacant niche through phenotypic plasticity and intraspecific competition. Brook charr exhibit a resource polymorphism in some Canadian Shield lakes, where a littoral ecotype feeds mainly on zoobenthos and a pelagic ecotype feeds mostly on zooplankton. The objectives of this study were to test that (i) resource polymorphism is common in these brook charr populations, (ii) the presence creek chub and white sucker, two introduced species competing with brook charr for littoral resources, will decrease the phenotypic divergence between the two brook charr ecotypes, and (iii) the ecological release from introduced species will increase population and/or individual niche widths in brook charr. The study was based on 27 lakes and five indicators of resource use (stomach content, liver δ13C, muscle astaxanthin concentration, pyloric caecum length, and gill raker length). Our results indicate that within-lake differences in resource use by both ecotypes are common and stable through time. When facing interspecific competition, both littoral and pelagic brook charr incorporated more pelagic prey into their diet but maintained the amplitude of their differences in resource use, which contradicts our second prediction. Finally, we did not find any significant effect of introduced species on population and individual niche widths of brook charr. We suggest that the difference in feeding mode among distantly related competitors could prevent the complete exclusion of a species from a given niche and explain the lack of response to the ecological release.
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Affiliation(s)
- Vincent Rainville
- Research Centre for Watershed - Aquatic Ecosystem Interactions, Université du Québec à Trois-Rivières, C. P. 500, Trois-Rivières, QC, G9A 5H7, Canada
| | - Antoine Filion
- Research Centre for Watershed - Aquatic Ecosystem Interactions, Université du Québec à Trois-Rivières, C. P. 500, Trois-Rivières, QC, G9A 5H7, Canada
| | - Isabelle Lussier
- Research Centre for Watershed - Aquatic Ecosystem Interactions, Université du Québec à Trois-Rivières, C. P. 500, Trois-Rivières, QC, G9A 5H7, Canada
| | - Marc Pépino
- Research Centre for Watershed - Aquatic Ecosystem Interactions, Université du Québec à Trois-Rivières, C. P. 500, Trois-Rivières, QC, G9A 5H7, Canada
| | - Pierre Magnan
- Research Centre for Watershed - Aquatic Ecosystem Interactions, Université du Québec à Trois-Rivières, C. P. 500, Trois-Rivières, QC, G9A 5H7, Canada.
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Chavarie L, Howland KL, Harris LN, Gallagher CP, Hansen MJ, Tonn WM, Muir AM, Krueger CC. Among-individual diet variation within a lake trout ecotype: Lack of stability of niche use. Ecol Evol 2021; 11:1457-1475. [PMID: 33598144 PMCID: PMC7863394 DOI: 10.1002/ece3.7158] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2020] [Revised: 11/17/2020] [Accepted: 12/02/2020] [Indexed: 11/22/2022] Open
Abstract
In a polyphenic species, differences in resource use are expected among ecotypes, and homogeneity in resource use is expected within an ecotype. Yet, using a broad resource spectrum has been identified as a strategy for fishes living in unproductive northern environments, where food is patchily distributed and ephemeral. We investigated whether specialization of trophic resources by individuals occurred within the generalist piscivore ecotype of lake trout from Great Bear Lake, Canada, reflective of a form of diversity. Four distinct dietary patterns of resource use within this lake trout ecotype were detected from fatty acid composition, with some variation linked to spatial patterns within Great Bear Lake. Feeding habits of different groups within the ecotype were not associated with detectable morphological or genetic differentiation, suggesting that behavioral plasticity caused the trophic differences. A low level of genetic differentiation was detected between exceptionally large-sized individuals and other piscivore individuals. We demonstrated that individual trophic specialization can occur within an ecotype inhabiting a geologically young system (8,000-10,000 yr BP), a lake that sustains high levels of phenotypic diversity of lake trout overall. The characterization of niche use among individuals, as done in this study, is necessary to understand the role that individual variation can play at the beginning of differentiation processes.
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Affiliation(s)
- Louise Chavarie
- Faculty of Environmental Sciences and Natural Resource ManagementNorwegian University of Life SciencesÅsNorway
- Scottish Centre for Ecology and the Natural EnvironmentIBAHCMGlasgowUK
- Department of Fisheries and WildlifeCenter for Systems Integration and SustainabilityMichigan State UniversityEast LansingMIUSA
| | - Kimberly L. Howland
- Fisheries and Oceans CanadaWinnipegMBCanada
- Department of Biological SciencesUniversity of AlbertaEdmontonABCanada
| | | | | | - Michael J. Hansen
- U.S. Geological Survey (retired)Hammond Bay Biological StationMillersburgMIUSA
| | - William M. Tonn
- Department of Biological SciencesUniversity of AlbertaEdmontonABCanada
| | | | - Charles C. Krueger
- Department of Fisheries and WildlifeCenter for Systems Integration and SustainabilityMichigan State UniversityEast LansingMIUSA
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Bosch TCG, McFall-Ngai M. Animal development in the microbial world: Re-thinking the conceptual framework. Curr Top Dev Biol 2021; 141:399-427. [PMID: 33602495 PMCID: PMC8214508 DOI: 10.1016/bs.ctdb.2020.11.007] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Animals have evolved within the framework of the microbes and are constantly exposed to diverse microbiota. This dominance of the microbial world is forcing all fields of biology to question some of their most basic premises, with developmental biology being no exception. While animals under laboratory conditions can develop and live without microbes, they are far from normal, and would not survive under natural conditions, where their fitness would be strongly compromised. Since much of the undescribed biodiversity on Earth is microbial, any consideration of animal development in the absence of the recognition of microbes will be incomplete. Here, we show that animal development may never have been autonomous, rather it requires transient or persistent interactions with the microbial world. We propose that to formulate a comprehensive understanding of embryogenesis and post-embryonic development, we must recognize that symbiotic microbes provide important developmental signals and contribute in significant ways to phenotype production. This offers limitless opportunities for the field of developmental biology to expand.
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Affiliation(s)
- Thomas C G Bosch
- Zoological Institute, Christian-Albrechts-University Kiel, Kiel, Germany.
| | - Margaret McFall-Ngai
- Pacific Biosciences Research Center, Kewalo Marine Laboratory, University of Hawai'i at Mānoa, Honolulu, HI, United States
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Nicholson GM, Clements KD. Ecomorphological divergence and trophic resource partitioning in 15 syntopic Indo-Pacific parrotfishes (Labridae: Scarini). Biol J Linn Soc Lond 2021. [DOI: 10.1093/biolinnean/blaa210] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/28/2022]
Abstract
Abstract
Adaptive diversification is a product of both phylogenetic constraint and ecological opportunity. The species-rich parrotfish genera Scarus and Chlorurus display considerable variation in trophic cranial morphology, but these parrotfishes are often described as generalist herbivores. Recent work has suggested that parrotfish partition trophic resources at very fine spatial scales, raising the question of whether interspecific differences in cranial morphology reflect trophic partitioning. We tested this hypothesis by comparing targeted feeding substrata with a previously published dataset of nine cranial morphological traits. We sampled feeding substrata of 15 parrotfish species at Lizard Island, Great Barrier Reef, Australia, by following individuals until focused biting was observed, then extracting a bite core 22 mm in diameter. Three indices were parameterized for each bite core: substratum taphonomy, maximum turf height and cover of crustose coralline algae. Parrotfish species were spread along a single axis of variation in feeding substrata: successional status of the substratum taphonomy and epilithic and endolithic biota. This axis of trophic variation was significantly correlated with cranial morphology, indicating that morphological disparity within this clade is associated with interspecific partitioning of feeding substrata. Phylogenetic signal and phylomorphospace analyses revealed that the evolution of this clade involved a hitherto-unrecognized level of trophic diversification.
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Affiliation(s)
| | - Kendall D Clements
- School of Biological Sciences, University of Auckland, Auckland, New Zealand
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Castro KMSA, Amado TF, Olalla-Tárraga MÁ, Gouveia SF, Navas CA, Martinez PA. Water constraints drive allometric patterns in the body shape of tree frogs. Sci Rep 2021; 11:1218. [PMID: 33441858 PMCID: PMC7806824 DOI: 10.1038/s41598-020-80456-1] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2020] [Accepted: 12/16/2020] [Indexed: 01/29/2023] Open
Abstract
The origin of morphological diversity is a critical question in evolutionary biology. Interactions between the environment and developmental processes have determining roles in morphological diversity, creating patterns through space and over time. Also, the shape of organisms tends to vary with increasing size as a result of those developmental processes, known as allometry. Several studies have demonstrated that the body sizes of anurans are associated with hydric conditions in their environments and that localities with high water stress tend to select for larger individuals. However, how environmental conditions alter those patterns of covariance between size and shape is still elusive. We used 3D geometric morphometric analyses, associated with phylogenetic comparative methods, to determine if the morphological variations and allometric patterns found in Arboranae (Anura) is linked to water conservation mechanisms. We found effects of the hydric stress on the shape of Arboranae species, favouring globular shapes. Also, the allometric patterns varied in intensity according to the water stress gradient, being particularly relevant for smaller frogs, and more intense in environments with higher water deficits. Our study provides empirical evidence that more spherical body shapes, especially among smaller species, reflect an important adaptation of anurans to water conservation in water-constrained environments.
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Affiliation(s)
- Kathleen M S A Castro
- Programa de Pós-Graduação em Ecologia e Conservação, Universidade Federal de Sergipe, São Cristóvão, Sergipe, 49.000-100, Brazil.
- PIBi Lab - Laboratório de Pesquisas Integrativas em Biodiversidade, Universidade Federal de Sergipe, São Cristóvão, Sergipe, 49100-000, Brazil.
| | - Talita F Amado
- Departamento de Biología, Geología, Física y Química Inorgánica, Universidad Rey Juan Carlos, Tulipán s/n, Móstoles, 28933, Madrid, Spain
- PIBi Lab - Laboratório de Pesquisas Integrativas em Biodiversidade, Universidade Federal de Sergipe, São Cristóvão, Sergipe, 49100-000, Brazil
| | - Miguel Á Olalla-Tárraga
- Departamento de Biología, Geología, Física y Química Inorgánica, Universidad Rey Juan Carlos, Tulipán s/n, Móstoles, 28933, Madrid, Spain
| | - Sidney F Gouveia
- Departamento de Ecologia, Universidade Federal de Sergipe, São Cristóvão, Sergipe, Brazil
- PIBi Lab - Laboratório de Pesquisas Integrativas em Biodiversidade, Universidade Federal de Sergipe, São Cristóvão, Sergipe, 49100-000, Brazil
| | - Carlos A Navas
- Departamento de Fisiologia Geral, Instituto de Biociência, Universidade de São Paulo, São Paulo, Brazil
| | - Pablo A Martinez
- Departamento de Biologia, Universidade Federal de Sergipe, São Cristóvão, Sergipe, Brazil
- PIBi Lab - Laboratório de Pesquisas Integrativas em Biodiversidade, Universidade Federal de Sergipe, São Cristóvão, Sergipe, 49100-000, Brazil
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Beck SV, Räsänen K, Leblanc CA, Skúlason S, Jónsson ZO, Kristjánsson BK. Differences among families in craniofacial shape at early life-stages of Arctic charr (Salvelinus alpinus). BMC DEVELOPMENTAL BIOLOGY 2020; 20:21. [PMID: 33106153 PMCID: PMC7586659 DOI: 10.1186/s12861-020-00226-0] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/22/2020] [Accepted: 10/15/2020] [Indexed: 11/10/2022]
Abstract
BACKGROUND Organismal fitness can be determined at early life-stages, but phenotypic variation at early life-stages is rarely considered in studies on evolutionary diversification. The trophic apparatus has been shown to contribute to sympatric resource-mediated divergence in several taxa. However, processes underlying diversification in trophic traits are poorly understood. Using phenotypically variable Icelandic Arctic charr (Salvelinus alpinus), we reared offspring from multiple families under standardized laboratory conditions and tested to what extent family (i.e. direct genetic and maternal effects) contributes to offspring morphology at hatching (H) and first feeding (FF). To understand the underlying mechanisms behind early life-stage variation in morphology, we examined how craniofacial shape varied according to family, offspring size, egg size and candidate gene expression. RESULTS Craniofacial shape (i.e. the Meckel's cartilage and hyoid arch) was more variable between families than within families both across and within developmental stages. Differences in craniofacial morphology between developmental stages correlated with offspring size, whilst within developmental stages only shape at FF correlated with offspring size, as well as female mean egg size. Larger offspring and offspring from females with larger eggs consistently had a wider hyoid arch and contracted Meckel's cartilage in comparison to smaller offspring. CONCLUSIONS This study provides evidence for family-level variation in early life-stage trophic morphology, indicating the potential for parental effects to facilitate resource polymorphism.
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Affiliation(s)
- Samantha V Beck
- Department of Aquaculture and Fish Biology, Hólar University, 551, Sauðárkrókur, Iceland. .,Institute of Life- and Environmental Sciences, University of Iceland, Reykjavík, Iceland. .,The Rivers and Lochs Institute, University of the Highlands and Islands, Inverness, UK.
| | - Katja Räsänen
- Department of Aquatic Ecology, Eawag, Swiss Federal Institute of Aquatic Science and Technology, Dübendorf, Switzerland.,Institute of Integrative Biology, ETH Zürich, Zürich, Switzerland
| | - Camille A Leblanc
- Department of Aquaculture and Fish Biology, Hólar University, 551, Sauðárkrókur, Iceland
| | - Skúli Skúlason
- Department of Aquaculture and Fish Biology, Hólar University, 551, Sauðárkrókur, Iceland
| | - Zophonías O Jónsson
- Institute of Life- and Environmental Sciences, University of Iceland, Reykjavík, Iceland
| | - Bjarni K Kristjánsson
- Department of Aquaculture and Fish Biology, Hólar University, 551, Sauðárkrókur, Iceland
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Peris Tamayo A, Devineau O, Præbel K, Kahilainen KK, Østbye K. A brain and a head for a different habitat: Size variation in four morphs of Arctic charr ( Salvelinus alpinus (L.)) in a deep oligotrophic lake. Ecol Evol 2020; 10:11335-11351. [PMID: 33144968 PMCID: PMC7593136 DOI: 10.1002/ece3.6771] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2020] [Revised: 08/05/2020] [Accepted: 08/17/2020] [Indexed: 01/04/2023] Open
Abstract
Adaptive radiation is the diversification of species to different ecological niches and has repeatedly occurred in different salmonid fish of postglacial lakes. In Lake Tinnsjøen, one of the largest and deepest lakes in Norway, the salmonid fish, Arctic charr (Salvelinus alpinus (L.)), has likely radiated within 9,700 years after deglaciation into ecologically and genetically segregated Piscivore, Planktivore, Dwarf, and Abyssal morphs in the pelagial, littoral, shallow-moderate profundal, and deep-profundal habitats. We compared trait variation in the size of the head, the eye and olfactory organs, as well as the volumes of five brain regions of these four Arctic charr morphs. We hypothesised that specific habitat characteristics have promoted divergent body, head, and brain sizes related to utilized depth differing in environmental constraints (e.g., light, oxygen, pressure, temperature, and food quality). The most important ecomorphological variables differentiating morphs were eye area, habitat, and number of lamellae. The Abyssal morph living in the deepest areas of the lake had the smallest brain region volumes, head, and eye size. Comparing the olfactory bulb with the optic tectum in size, it was larger in the Abyssal morph than in the Piscivore morph. The Piscivore and Planktivore morphs that use more illuminated habitats have the largest optic tectum volume, followed by the Dwarf. The observed differences in body size and sensory capacities in terms of vision and olfaction in shallow and deepwater morphs likely relates to foraging and mating habitats in Lake Tinnsjøen. Further seasonal and experimental studies of brain volume in polymorphic species are needed to test the role of plasticity and adaptive evolution behind the observed differences.
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Affiliation(s)
- Ana‐Maria Peris Tamayo
- Faculty of Applied Ecology, Agricultural Sciences and BiotechnologyInland Norway University of Applied SciencesKoppangNorway
- Norwegian College of Fishery Science, Faculty of Biosciences, Fisheries and EconomicsUiT—The Arctic University of NorwayTromsøNorway
| | - Olivier Devineau
- Faculty of Applied Ecology, Agricultural Sciences and BiotechnologyInland Norway University of Applied SciencesKoppangNorway
| | - Kim Præbel
- Norwegian College of Fishery Science, Faculty of Biosciences, Fisheries and EconomicsUiT—The Arctic University of NorwayTromsøNorway
| | | | - Kjartan Østbye
- Faculty of Applied Ecology, Agricultural Sciences and BiotechnologyInland Norway University of Applied SciencesKoppangNorway
- Centre for Ecological and Evolutionary Synthesis (CEES), Department of BiosciencesUniversity of OsloOsloNorway
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Scharnweber K, Gårdmark A. Feeding specialists on fatty acid‐rich prey have higher gonad weights: Pay‐off in Baltic perch? Ecosphere 2020. [DOI: 10.1002/ecs2.3234] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/06/2023] Open
Affiliation(s)
- Kristin Scharnweber
- Department of Ecology and Genetics, Limnology Uppsala University Norbyvägen 18d Uppsala75236Sweden
| | - Anna Gårdmark
- Department of Aquatic resources Swedish University of Agricultural Science Skolgatan 6 Öregrund742 42Sweden
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49
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Qiao J, Hu J, Xia Q, Zhu R, Chen K, Zhao J, Yan Y, Chu L, He D. Pelagic-benthic resource polymorphism in Schizopygopsis thermalis Herzenstein 1891 (Pisces, Cyprinidae) in a headwater lake in the Salween River system on the Tibetan Plateau. Ecol Evol 2020; 10:7431-7444. [PMID: 32760539 PMCID: PMC7391544 DOI: 10.1002/ece3.6470] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/12/2020] [Revised: 05/11/2020] [Accepted: 05/13/2020] [Indexed: 01/13/2023] Open
Abstract
Resource polymorphism is a ubiquitous phenomenon in vertebrates and may represent a critical intermediate stage in speciation. Freshwater lakes in high-altitude areas represent a natural system for understanding resource polymorphism in fishes benefiting from diverse lacustrine environments and species-poor fish assemblages. We report resource polymorphism in a cyprinid fish, Schizopygopsis thermalis, in Lake Amdo Tsonak Co, a headwater lake in the upper Salween River system. Two discrete intraspecific morphs, planktivorous and benthivorous, were identified according to geometric morphometrics and traditional univariate linear measures. The planktivorous morph exhibits a longer head, longer upper and lower jaw, larger asymptotic standard length (L∞ ), lower growth rate (k), and higher growth performance index (φ) than the benthivorous morph. With respect to descriptive traits, the planktivorous morph possesses a large, terminal mouth and obvious mucus pores on the cheek and chin, while the benthivorous morph is characterized by a more inferior mouth with a sharpen horny edge on the lower jaw and unconspicuous mucus pores. The discrete pelagic-benthic resources and low interspecific competition in the lake system might drive the initial differentiation of the two morphs, and partial spatial reproductive isolation in breeding further maintains and reinforces the differences between them.
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Affiliation(s)
- Jialing Qiao
- Provincial Key Laboratory of Biotic Environment and Ecological Safety in Anhui, and College of Life SciencesAnhui Normal UniversityWuhuChina
| | - Jiaxin Hu
- Institute of HydrobiologyChinese Academy of SciencesWuhanChina
| | - Qin Xia
- Provincial Key Laboratory of Biotic Environment and Ecological Safety in Anhui, and College of Life SciencesAnhui Normal UniversityWuhuChina
| | - Ren Zhu
- Institute of HydrobiologyChinese Academy of SciencesWuhanChina
| | - Kang Chen
- Institute of HydrobiologyChinese Academy of SciencesWuhanChina
| | - Jie Zhao
- Institute of HydrobiologyChinese Academy of SciencesWuhanChina
| | - Yunzhi Yan
- Provincial Key Laboratory of Biotic Environment and Ecological Safety in Anhui, and College of Life SciencesAnhui Normal UniversityWuhuChina
| | - Ling Chu
- Provincial Key Laboratory of Biotic Environment and Ecological Safety in Anhui, and College of Life SciencesAnhui Normal UniversityWuhuChina
| | - Dekui He
- Institute of HydrobiologyChinese Academy of SciencesWuhanChina
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50
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Østbye K, Hagen Hassve M, Peris Tamayo AM, Hagenlund M, Vogler T, Præbel K. " And if you gaze long into an abyss, the abyss gazes also into thee": four morphs of Arctic charr adapting to a depth gradient in Lake Tinnsjøen. Evol Appl 2020; 13:1240-1261. [PMID: 32684957 PMCID: PMC7359846 DOI: 10.1111/eva.12983] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/03/2020] [Revised: 04/14/2020] [Accepted: 04/16/2020] [Indexed: 12/24/2022] Open
Abstract
The origin of species is a central topic in biology. Ecological speciation might be a driver in adaptive radiation, providing a framework for understanding mechanisms, level, and rate of diversification. The Arctic charr Salvelinus alpinus L. is a polymorphic species with huge morphological and life‐history diversity in Holarctic water systems. We studied adaptive radiation of Arctic charr in the 460‐m‐deep Lake Tinnsjøen to (a) document eco‐morphology and life‐history traits of morphs, (b) estimate reproductive isolation of morphs, and (c) illuminate Holarctic phylogeography and lineages colonizing Lake Tinnsjøen. We compared Lake Tinnsjøen with four Norwegian outgroup populations. Four field‐assigned morphs were identified in Lake Tinnsjøen: the planktivore morph in all habitats except deep profundal, the dwarf morph in shallow‐moderate profundal, the piscivore morph mainly in shallow‐moderate profundal, and a new undescribed abyssal morph in the deep profundal. Morphs displayed extensive life‐history variation in age and size. A moderate‐to‐high concordance was observed among morphs and four genetic clusters from microsatellites. mtDNA suggested two minor endemic clades in Lake Tinnsjøen originating from one widespread colonizing clade in the Holarctic. All morphs were genetically differentiated at microsatellites (FST: 0.12–0.20), associated with different mtDNA clade frequencies. Analyses of outgroup lakes implied colonization from a river below Lake Tinnsjøen. Our findings suggest postglacial adaptive radiation of one colonizing mtDNA lineage with niche specialization along a depth–temperature–productivity–pressure gradient. Concordance between reproductive isolation and habitats of morphs implies ecological speciation as a mechanism. Particularly novel is the extensive morph diversification with depth into the often unexplored deepwater profundal habitat, suggesting we may have systematically underestimated biodiversity in lakes. In a biological conservation framework, it is imperative to protect endemic below‐species‐level biodiversity, particularly so since within‐species variation comprises an extremely important component of the generally low total biodiversity observed in the northern freshwater systems.
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Affiliation(s)
- Kjartan Østbye
- Faculty of Applied Ecology, Agricultural Sciences and Biotechnology Inland Norway University of Applied Sciences Campus Evenstad Norway.,Department of Biosciences Centre for Ecological and Evolutionary Synthesis (CEES) University of Oslo Oslo Norway
| | - Marius Hagen Hassve
- Faculty of Applied Ecology, Agricultural Sciences and Biotechnology Inland Norway University of Applied Sciences Campus Evenstad Norway
| | - Ana-Maria Peris Tamayo
- Faculty of Applied Ecology, Agricultural Sciences and Biotechnology Inland Norway University of Applied Sciences Campus Evenstad Norway
| | - Mari Hagenlund
- Faculty of Applied Ecology, Agricultural Sciences and Biotechnology Inland Norway University of Applied Sciences Campus Evenstad Norway
| | - Thomas Vogler
- Faculty of Applied Ecology, Agricultural Sciences and Biotechnology Inland Norway University of Applied Sciences Campus Evenstad Norway
| | - Kim Præbel
- Faculty of Biosciences, Fisheries and Economics Norwegian College of Fishery Science UiT Arctic University of Norway Tromsø Norway
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