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Iwai S. A simple model and rules for the evolution of microbial mutualistic symbiosis with positive fitness feedbacks. Theor Popul Biol 2024; 160:14-24. [PMID: 39384161 DOI: 10.1016/j.tpb.2024.09.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2024] [Revised: 09/29/2024] [Accepted: 09/30/2024] [Indexed: 10/11/2024]
Abstract
The evolution of microbe-microbe mutualistic symbiosis is considered to be promoted by repeated exchanges of fitness benefits, which can generate positive fitness feedbacks ('partner fidelity feedback') between species. However, previous evolutionary models for mutualism have not captured feedback dynamics or coupling of fitness between species. Here, a simple population model is developed to understand the evolution of mutualistic symbiosis in which two microbial species (host and symbiont) continuously grow and exchange fitness benefits to generate feedback dynamics but do not strictly control each other. The assumption that individual microbes provide constant amounts of resources, which are equally divided among interacting partner individual, enables us to reveal a simple rule for the evolution of costly mutualism with positive fitness feedbacks: the product of the benefit-to-cost ratios for each species exceeds one. When this condition holds, high cooperative investment levels are favored in both species regardless of the amount invested by each partner. The model is then extended to examine how symbiont mutation, immigration, or switching affects the spread of selfish or cooperative symbionts, which decrease and increase their investment levels, respectively. In particular, when a host associates with numerous symbionts without enforcement, neither mutation nor immigration but rather random switching would allow the spread of cooperative symbionts. Examples using symbiont switching for evolution would include large ciliates hosting numerous intracellular endosymbionts. The simple model and rules would provide a basis for understanding the evolution of microbe-microbe mutualistic symbiosis with positive fitness feedbacks and without enforcement mechanisms.
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Affiliation(s)
- Sosuke Iwai
- Department of Biology, Faculty of Education, Hirosaki University, Hirosaki 036-8560, Japan.
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2
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Bronstein JL, Davidowitz G, Lichtenberg EM, Irwin RE. The Hole Truth: Why Do Bumble Bees Rob Flowers More Than Once? PLANTS (BASEL, SWITZERLAND) 2024; 13:2507. [PMID: 39273991 PMCID: PMC11396959 DOI: 10.3390/plants13172507] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/20/2024] [Revised: 08/29/2024] [Accepted: 08/30/2024] [Indexed: 09/16/2024]
Abstract
Primary nectar-robbers feed through holes they make in flowers, often bypassing the plant's reproductive organs in the process. In many robbed plants, multiple holes are made in a single flower. Why a flower should be robbed repeatedly is difficult to understand: a hole signals that a nectar forager has already fed, which would seem likely to predict low rewards. We tested three explanations for this pattern in Corydalis caseana (Fumariaceae), a bumble bee pollinated and robbed plant: (1) multiple holes appear only after all flowers have been robbed once; (2) individual foragers make multiple holes during single visits; and (3) it is more profitable for bees to rob older flowers, even if they have already been robbed. We tested these hypotheses from 2014 to 2016 in a Colorado, USA population using data on robbing rates over time, floral longevity, nectar accumulation in visited and unvisited flowers, and the accumulation of robbing holes across the life of flowers. Multiple holes were already appearing when two-thirds of flowers still lacked a single hole, allowing us to reject the first hypothesis. The second hypothesis cannot offer a full explanation for multiple robbing holes because 35% of additional holes appeared in flowers one or more days after the first hole was made. Repeated sampling of bagged and exposed inflorescences revealed that flowers filled at a constant rate and refilled completely after being drained. Consequently, young flowers are of consistently low value to foragers compared to older flowers even if they had previously been robbed, consistent with the third hypothesis. While further studies are needed, these results offer a simple explanation for the paradoxical clustering of nectar-robbing damage in this and possibly other plant species.
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Affiliation(s)
- Judith L Bronstein
- Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA
| | - Goggy Davidowitz
- Department of Entomology, University of Arizona, Tucson, AZ 85721, USA
| | - Elinor M Lichtenberg
- Department of Biological Sciences and Advanced Environmental Research Institute, University of North Texas, Denton, TX 76203, USA
| | - Rebecca E Irwin
- Department of Applied Ecology, North Carolina State University, Raleigh, NC 27695, USA
- Rocky Mountain Biological Lab., Crested Butte, CO 81224, USA
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3
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Westmoreland A, Emery NC. Asynchronous Life Histories Generate Uneven Arms Races and Impact the Maintenance of Mutualisms. Am Nat 2024; 204:E57-E69. [PMID: 39179231 DOI: 10.1086/731295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 08/26/2024]
Abstract
AbstractMutualisms constitute a diverse class of ecologically important interactions, yet their ecological and evolutionary stability remain topics of debate in coevolutionary theory. Recent theoretical and empirical work has suggested that coevolutionary arms races may be involved in the maintenance of mutualistic interactions, sustaining mutually beneficial outcomes for interacting species while producing exaggerated traits. Here we present an individual-based model that evaluates how asynchronous life histories-that is, partners with different average lifespans-change the dynamics of trait coevolution, the expected fitness outcomes for species involved, and the dynamics of selection differentials across time for each species. Results indicate that a longer-lived mutualist will consistently "lose" an otherwise balanced coevolutionary arms race, being outpaced in both the mean trait value and fitness outcome compared with a shorter-lived partner. Furthermore, linear selection differentials on mutualistic traits become increasingly divergent as life histories become increasingly asynchronous, with the longer-lived species experiencing persistent directional selection and the shorter-lived species experiencing weaker, more inconsistent selection. These results suggest that asynchronous life histories can complicate the maintenance of mutualistic interactions via coevolutionary arms races and that detecting coevolution via selection differentials may be difficult when life histories are sufficiently divergent.
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Laurich JR, Lash E, O'Brien AM, Pogoutse O, Frederickson ME. Community interactions among microbes give rise to host-microbiome mutualisms in an aquatic plant. mBio 2024; 15:e0097224. [PMID: 38904411 PMCID: PMC11324027 DOI: 10.1128/mbio.00972-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2024] [Accepted: 05/14/2024] [Indexed: 06/22/2024] Open
Abstract
Microbiomes often benefit plants, conferring resistance to pathogens, improving stress tolerance, or promoting plant growth. As potential plant mutualists, however, microbiomes are not a single organism but a community of species with complex interactions among microbial taxa and between microbes and their shared host. The nature of ecological interactions among microbes in the microbiome can have important consequences for the net effects of microbiomes on hosts. Here, we compared the effects of individual microbial strains and 10-strain synthetic communities on microbial productivity and host growth using the common duckweed Lemna minor and a synthetic, simplified version of its native microbiome. Except for Pseudomonas protegens, which was a mutualist when tested alone, all of the single strains we tested were commensals on hosts, benefiting from plant presence but not increasing host growth relative to uninoculated controls. However, 10-strain synthetic microbial communities increased both microbial productivity and duckweed growth more than the average single-strain inoculation and uninoculated controls, meaning that host-microbiome mutualisms can emerge from community interactions among microbes on hosts. The effects of community inoculation were sub-additive, suggesting at least some competition among microbes in the duckweed microbiome. We also investigated the relationship between L. minor fitness and that of its microbes, providing some of the first empirical estimates of broad fitness alignment between plants and members of their microbiomes; hosts grew faster with more productive microbes or microbiomes. IMPORTANCE There is currently substantial interest in engineering synthetic microbiomes for health or agricultural applications. One key question is how multi-strain microbial communities differ from single microbial strains in their productivity and effects on hosts. We tested 20 single bacterial strains and 2 distinct 10-strain synthetic communities on plant hosts and found that 10-strain communities led to faster host growth and greater microbial productivity than the average, but not the best, single strain. Furthermore, the microbial strains or communities that achieved the greatest cell densities were also the most beneficial to their hosts, showing that both specific single strains and multi-strain synthetic communities can engage in high-quality mutualisms with their hosts. Our results suggest that ~5% of single strains, as well as multi-strain synthetic communities comprised largely of commensal microbes, can benefit hosts and result in effective host-microbe mutualisms.
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Affiliation(s)
- Jason R. Laurich
- Department of Ecology
& Evolutionary Biology, University of
Toronto, Toronto,
Ontario, Canada
| | - Emma Lash
- Department of Ecology
& Evolutionary Biology, University of
Toronto, Toronto,
Ontario, Canada
| | - Anna M. O'Brien
- Department of Ecology
& Evolutionary Biology, University of
Toronto, Toronto,
Ontario, Canada
- Department of
Molecular, Cellular, and Biomedical Sciences, University of New
Hampshire, Durham,
New Hampshire, USA
| | - Oxana Pogoutse
- Department of Ecology
& Evolutionary Biology, University of
Toronto, Toronto,
Ontario, Canada
| | - Megan E. Frederickson
- Department of Ecology
& Evolutionary Biology, University of
Toronto, Toronto,
Ontario, Canada
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5
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Sun D, Rozmoš M, Kokkoris V, Kotianová M, Hršelová H, Bukovská P, Faghihinia M, Jansa J. Unraveling the diversity of hyphal explorative traits among Rhizophagus irregularis genotypes. MYCORRHIZA 2024; 34:303-316. [PMID: 38829432 PMCID: PMC11283409 DOI: 10.1007/s00572-024-01154-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Accepted: 05/26/2024] [Indexed: 06/05/2024]
Abstract
Differences in functioning among various genotypes of arbuscular mycorrhizal (AM) fungi can determine their fitness under specific environmental conditions, although knowledge of the underlying mechanisms still is very fragmented. Here we compared seven homokaryotic isolates (genotypes) of Rhizophagus irregularis, aiming to characterize the range of intraspecific variability with respect to hyphal exploration of organic nitrogen (N) resources, and N supply to plants. To this end we established two experiments (one in vitro and one in open pots) and used 15N-chitin as the isotopically labeled organic N source. In Experiment 1 (in vitro), mycelium of all AM fungal genotypes transferred a higher amount of 15N to the plants than the passive transfer of 15N measured in the non-mycorrhizal (NM) controls. Noticeably, certain genotypes (e.g., LPA9) showed higher extraradical mycelium biomass production but not necessarily greater 15N acquisition than the others. Experiment 2 (in pots) highlighted that some of the AM fungal genotypes (e.g., MA2, STSI) exhibited higher rates of targeted hyphal exploration of chitin-enriched zones, indicative of distinct N exploration patterns from the other genotypes. Importantly, there was a high congruence of hyphal exploration patterns between the two experiments (isolate STSI always showing highest efficiency of hyphal exploration and isolate L23/1 being consistently the lowest), despite very different (micro) environmental conditions in the two experiments. This study suggests possible strategies that AM fungal genotypes employ for efficient N acquisition, and how to measure them. Implications of such traits for local mycorrhizal community assembly still need to be understood.
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Affiliation(s)
- Daquan Sun
- Institute of Microbiology, Czech Academy of Sciences, Vídeňská, 14220, Praha 4, 1083, Czech Republic.
| | - Martin Rozmoš
- Institute of Microbiology, Czech Academy of Sciences, Vídeňská, 14220, Praha 4, 1083, Czech Republic
| | - Vasilis Kokkoris
- Vrije Universiteit Amsterdam, Amsterdam Institute for Life and Environment (A-LIFE), De Boelelaan 1108, Amsterdam, NL-1081HZ, The Netherlands
| | - Michala Kotianová
- Institute of Microbiology, Czech Academy of Sciences, Vídeňská, 14220, Praha 4, 1083, Czech Republic
| | - Hana Hršelová
- Institute of Microbiology, Czech Academy of Sciences, Vídeňská, 14220, Praha 4, 1083, Czech Republic
| | - Petra Bukovská
- Institute of Microbiology, Czech Academy of Sciences, Vídeňská, 14220, Praha 4, 1083, Czech Republic
| | - Maede Faghihinia
- Institute of Microbiology, Czech Academy of Sciences, Vídeňská, 14220, Praha 4, 1083, Czech Republic
- Department of Plant Pathology, Entomology, and Microbiology, Iowa State University, 2213 Pammel Dr, Ames, IA, 50011, US
| | - Jan Jansa
- Institute of Microbiology, Czech Academy of Sciences, Vídeňská, 14220, Praha 4, 1083, Czech Republic
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Kosmopoulos JC, Batstone-Doyle RT, Heath KD. Co-inoculation with novel nodule-inhabiting bacteria reduces the benefits of legume-rhizobium symbiosis. Can J Microbiol 2024; 70:275-288. [PMID: 38507780 DOI: 10.1139/cjm-2023-0209] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/22/2024]
Abstract
The ecologically and economically vital symbiosis between nitrogen-fixing rhizobia and leguminous plants is often thought of as a bi-partite interaction, yet studies increasingly show the prevalence of non-rhizobial endophytes (NREs) that occupy nodules alongside rhizobia. Yet, what impact these NREs have on plant or rhizobium fitness remains unclear. Here, we investigated four NRE strains found to naturally co-occupy nodules of the legume Medicago truncatula alongside Sinorhizobium meliloti in native soils. Our objectives were to (1) examine the direct and indirect effects of NREs on M. truncatula and S. meliloti fitness, and (2) determine whether NREs can re-colonize root and nodule tissues upon reinoculation. We identified one NRE strain (522) as a novel Paenibacillus species, another strain (717A) as a novel Bacillus species, and the other two (702A and 733B) as novel Pseudomonas species. Additionally, we found that two NREs (Bacillus 717A and Pseudomonas 733B) reduced the fitness benefits obtained from symbiosis for both partners, while the other two (522, 702A) had little effect. Lastly, we found that NREs were able to co-infect host tissues alongside S. meliloti. This study demonstrates that variation of NREs present in natural populations must be considered to better understand legume-rhizobium dynamics in soil communities.
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Affiliation(s)
- James C Kosmopoulos
- School of Integrative Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Department of Bacteriology, University of Wisconsin-Madison, Madison, WI, USA
- Microbiology Doctoral Training Program, University of Wisconsin-Madison, WI, USA
| | - Rebecca T Batstone-Doyle
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Department of Biology, McMaster University, Hamilton, ON, Canada
| | - Katy D Heath
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
- Department of Plant Biology, University of Illinois at Urbana-Champaign, Urbana, IL, USA
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7
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Layek U, Bhandari T, Das A, Karmakar P. Floral visitors of sesame (Sesamum indicum L.): Elucidating their nectar-robbing behaviour and impacts on the plant reproduction. PLoS One 2024; 19:e0300398. [PMID: 38635674 PMCID: PMC11025750 DOI: 10.1371/journal.pone.0300398] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/28/2023] [Accepted: 02/26/2024] [Indexed: 04/20/2024] Open
Abstract
Nectar robbing is common in angiosperms, especially in long tubular flowers or flowers with spurs that keep nectar out of reach of visitors. However, the robbing behaviour of bees is less understood. Here, we studied the sesame visitors, their robbing behaviour, and the impacts of robbing on plant reproductive fitness. Diverse insect species (primarily members of Hymenoptera) visited sesame flowers. The most effective pollinators were Amegilla zonata, Apis cerana, Apis dorsata, Apis florea, Ceratina binghami, Halictus acrocephalus and Xylocopa amethystina. Almost all visitors with variable percentages revealed the nectar-robbing phenomenon. Robbing activity depended on a complex of multiple attributes, including the visitor's body size, the corolla tube length, the availability and accessibility of nectar, and the resource-collecting task allocation of bees. Robbing activity varied according to flower-visiting species, flowering period and daytime. Robbing was comparatively higher in the late flowering period at 10.00-14.00 h. In the case of robbing visits, flower handling time was lower, and the visitation rate remained higher than non-robbing visits. Robbing visits did not significantly affect fruit and seed sets of sesame. Therefore, we can interpret the nectar-robbing interactions on sesame as commensal, with pollinators benefitting without altering the plant's reproductive fitness.
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Affiliation(s)
- Ujjwal Layek
- Department of Botany, Rampurhat College, Birbhum, India
| | - Trisha Bhandari
- Department of Botany & Forestry, Vidyasagar University, Midnapore, India
| | - Alokesh Das
- Department of Botany, Rampurhat College, Birbhum, India
| | - Prakash Karmakar
- Department of Botany & Forestry, Vidyasagar University, Midnapore, India
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8
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Smith CI, Leebens-Mack JH. 150 Years of Coevolution Research: Evolution and Ecology of Yucca Moths (Prodoxidae) and Their Hosts. ANNUAL REVIEW OF ENTOMOLOGY 2024; 69:375-391. [PMID: 37758220 DOI: 10.1146/annurev-ento-022723-104346] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/03/2023]
Abstract
Yucca moths (Tegeticula and Parategeticula) are specialized pollinators of yucca plants, possessing unique, tentacle-like mouthparts used to actively collect pollen and deposit it onto the flowers of their hosts. The moths' larvae feed on the developing seeds and fruit tissue. First described in 1873, the yucca-yucca moth pollination system is now considered the archetypical example of a coevolved intimate mutualism. Research conducted over the past three decades has transformed our understanding of yucca moth diversity and host plant interactions. We summarize the current understanding of the diversity, ecology, and evolution of this group, review evidence for coevolution of the insects and their hosts, and describe how the nature of the interaction varies across evolutionary time and ecological contexts. Finally, we identify unresolved questions and areas for future research.
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Duchenne F, Aubert S, Barreto E, Brenes E, Maglianesi MA, Santander T, Guevara EA, Graham CH. When cheating turns into a stabilizing mechanism of plant-pollinator communities. PLoS Biol 2023; 21:e3002434. [PMID: 38150463 PMCID: PMC10752559 DOI: 10.1371/journal.pbio.3002434] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/03/2023] [Accepted: 11/16/2023] [Indexed: 12/29/2023] Open
Abstract
Mutualistic interactions, such as plant-mycorrhizal or plant-pollinator interactions, are widespread in ecological communities and frequently exploited by cheaters, species that profit from interactions without providing benefits in return. Cheating usually negatively affects the fitness of the individuals that are cheated on, but the effects of cheating at the community level remains poorly understood. Here, we describe 2 different kinds of cheating in mutualistic networks and use a generalized Lotka-Volterra model to show that they have very different consequences for the persistence of the community. Conservative cheating, where a species cheats on its mutualistic partners to escape the cost of mutualistic interactions, negatively affects community persistence. In contrast, innovative cheating occurs with species with whom legitimate interactions are not possible, because of a physiological or morphological barrier. Innovative cheating can enhance community persistence under some conditions: when cheaters have few mutualistic partners, cheat at low or intermediate frequency and the cost associated with mutualism is not too high. Under these conditions, the negative effects of cheating on partner persistence are overcompensated at the community level by the positive feedback loops that arise in diverse mutualistic communities. Using an empirical dataset of plant-bird interactions (hummingbirds and flowerpiercers), we found that observed cheating patterns are highly consistent with theoretical cheating patterns found to increase community persistence. This result suggests that the cheating patterns observed in nature could contribute to promote species coexistence in mutualistic communities, instead of necessarily destabilizing them.
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Affiliation(s)
- François Duchenne
- Swiss Federal Institute for Forest, Snow and Landscape Research (WSL), Birmensdorf, Switzerland
| | - Stéphane Aubert
- Swiss Federal Institute for Forest, Snow and Landscape Research (WSL), Birmensdorf, Switzerland
| | - Elisa Barreto
- Swiss Federal Institute for Forest, Snow and Landscape Research (WSL), Birmensdorf, Switzerland
| | - Emanuel Brenes
- Escuela de Ciencias Exactas y Naturales, Universidad Estatal a Distancia (UNED), San Pedro de Montes de Oca, San José, Costa Rica
| | - María A. Maglianesi
- Escuela de Ciencias Exactas y Naturales, Universidad Estatal a Distancia (UNED), San Pedro de Montes de Oca, San José, Costa Rica
| | | | - Esteban A. Guevara
- Swiss Federal Institute for Forest, Snow and Landscape Research (WSL), Birmensdorf, Switzerland
| | - Catherine H. Graham
- Swiss Federal Institute for Forest, Snow and Landscape Research (WSL), Birmensdorf, Switzerland
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10
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Qu H, Heifetz A, Seifan M. Batesian mimicry or general food deception? An evolutionary game between plants for pollinator services. J Theor Biol 2023; 575:111609. [PMID: 37708988 DOI: 10.1016/j.jtbi.2023.111609] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2023] [Revised: 08/09/2023] [Accepted: 08/12/2023] [Indexed: 09/16/2023]
Abstract
Floral food deception is a well-known phenomenon which is not thoroughly understood. Particularly, it is unclear what drives a plant towards Batesian mimicry or towards generalized food deception. We analysed the evolutionary game between a Model species with nectar-secreting flowers and a Deceiver species that provides no nectar who share pollinators for reproduction. We focused our analysis on the effect of similarity of floral signals between participating plants and on costs of nectar production. We defined payoffs in the game between Models and Deceivers as the stationary visitation frequencies to participating species with different signal similarities and nectar costs. Therefore, fitness payoff of each strategy was a product of complex interactions between plant species composing the community and the pollinators visiting them. Our model provides a unified framework in which consequences of Model species interaction with different deception modes can be compared. Our findings suggest that plant-pollinator systems, like other mutualistic systems, are prone to exploitation, and that exploitation may persist at a large range of conditions. We showed that floral similarity, and thus, pollinators' ability to discriminate between Model and deceptive species, governs the stability of Batesian mimicry, while pollinator switching and sampling behaviour enables the persistence of general food deception.
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Affiliation(s)
- Hongchun Qu
- Institute of Ecological Safety, Chongqing University of Posts and Telecommunications, Chongqing 400065, China
| | - Aviad Heifetz
- Management and Economics Department, the Open University of Israel, Israel
| | - Merav Seifan
- Mitrani Department of Desert Ecology, The Swiss Institute for Dryland Environmental & Energy Research, The Blaustein Institutes for Desert Research, Ben-Gurion University of the Negev, 849900, Israel.
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11
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Holland BL, Matthews ML, Bota P, Sweetlove LJ, Long SP, diCenzo GC. A genome-scale metabolic reconstruction of soybean and Bradyrhizobium diazoefficiens reveals the cost-benefit of nitrogen fixation. THE NEW PHYTOLOGIST 2023; 240:744-756. [PMID: 37649265 DOI: 10.1111/nph.19203] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/29/2023] [Accepted: 07/05/2023] [Indexed: 09/01/2023]
Abstract
Nitrogen-fixing symbioses allow legumes to thrive in nitrogen-poor soils at the cost of diverting some photoassimilate to their microsymbionts. Effort is being made to bioengineer nitrogen fixation into nonleguminous crops. This requires a quantitative understanding of its energetic costs and the links between metabolic variations and symbiotic efficiency. A whole-plant metabolic model for soybean (Glycine max) with its associated microsymbiont Bradyrhizobium diazoefficiens was developed and applied to predict the cost-benefit of nitrogen fixation with varying soil nitrogen availability. The model predicted a nitrogen-fixation cost of c. 4.13 g C g-1 N, which when implemented into a crop scale model, translated to a grain yield reduction of 27% compared with a non-nodulating plant receiving its nitrogen from the soil. Considering the lower nitrogen content of cereals, the yield cost to a hypothetical N-fixing cereal is predicted to be less than half that of soybean. Soybean growth was predicted to be c. 5% greater when the nodule nitrogen export products were amides versus ureides. This is the first metabolic reconstruction in a tropical crop species that simulates the entire plant and nodule metabolism. Going forward, this model will serve as a tool to investigate carbon use efficiency and key mechanisms within N-fixing symbiosis in a tropical species forming determinate nodules.
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Affiliation(s)
- Bethany L Holland
- Carl R Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA
| | - Megan L Matthews
- Department of Civil and Environmental Engineering, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA
| | - Pedro Bota
- Department of Plant Sciences, University of Oxford, South Parks Road, Oxford, OX1 3RB, UK
| | - Lee J Sweetlove
- Department of Plant Sciences, University of Oxford, South Parks Road, Oxford, OX1 3RB, UK
| | - Stephen P Long
- Carl R Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA
- Departments of Plant Biology and of Crop Sciences, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA
| | - George C diCenzo
- Department of Biology, Queen's University, Kingston, ON, K7L 3N6, Canada
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Nathan P, Economo EP, Guénard B, Simonsen AK, Frederickson ME. Generalized mutualisms promote range expansion in both plant and ant partners. Proc Biol Sci 2023; 290:20231083. [PMID: 37700642 PMCID: PMC10498038 DOI: 10.1098/rspb.2023.1083] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2023] [Accepted: 08/14/2023] [Indexed: 09/14/2023] Open
Abstract
Mutualism improves organismal fitness, but strong dependence on another species can also limit a species' ability to thrive in a new range if its partner is absent. We assembled a large, global dataset on mutualistic traits and species ranges to investigate how multiple plant-animal and plant-microbe mutualisms affect the spread of legumes and ants to novel ranges. We found that generalized mutualisms increase the likelihood that a species establishes and thrives beyond its native range, whereas specialized mutualisms either do not affect or reduce non-native spread. This pattern held in both legumes and ants, indicating that specificity between mutualistic partners is a key determinant of ecological success in a new habitat. Our global analysis shows that mutualism plays an important, if often overlooked, role in plant and insect invasions.
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Affiliation(s)
- Pooja Nathan
- Department of Ecology & Evolutionary Biology, University of Toronto, 25 Willcocks Street, Toronto M5S 3B2, Ontario, Canada
| | - Evan P. Economo
- Biodiversity and Biocomplexity Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa 904-0495, Japan
| | - Benoit Guénard
- School of Biological Sciences, The University of Hong Kong, Pok Fu Lam, Hong Kong
| | - Anna K. Simonsen
- Department of Biological Sciences, Florida International University, 11200 SW 8th St, Miami, FL 33199, USA
| | - Megan E. Frederickson
- Department of Ecology & Evolutionary Biology, University of Toronto, 25 Willcocks Street, Toronto M5S 3B2, Ontario, Canada
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Rahman A, Manci M, Nadon C, Perez IA, Farsamin WF, Lampe MT, Le TH, Torres Martínez L, Weisberg AJ, Chang JH, Sachs JL. Competitive interference among rhizobia reduces benefits to hosts. Curr Biol 2023; 33:2988-3001.e4. [PMID: 37490853 DOI: 10.1016/j.cub.2023.06.081] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2023] [Revised: 03/31/2023] [Accepted: 06/29/2023] [Indexed: 07/27/2023]
Abstract
The capacity of beneficial microbes to compete for host infection-and the ability of hosts to discriminate among them-introduces evolutionary conflict that is predicted to destabilize mutualism. We investigated fitness outcomes in associations between legumes and their symbiotic rhizobia to characterize fitness impacts of microbial competition. Diverse Bradyrhizobium strains varying in their capacity to fix nitrogen symbiotically with a common host plant, Acmispon strigosus, were tested in full-factorial coinoculation experiments involving 28 pairwise strain combinations. We analyzed the effects of interstrain competition and host discrimination on symbiotic-interaction outcomes by relativizing fitness proxies to clonally infected and uninfected controls. More than one thousand root nodules of coinoculated plants were genotyped to quantify strain occupancy, and the Bradyrhizobium strain genome sequences were analyzed to uncover the genetic bases of interstrain competition outcomes. Strikingly, interstrain competition favored a fast-growing, minimally beneficial rhizobia strain. Host benefits were significantly diminished in coinoculation treatments relative to expectations from clonally inoculated controls, consistent with competitive interference among rhizobia that reduced both nodulation and plant growth. Competition traits appear polygenic, linked with inter-strain allelopathic interactions in the rhizosphere. This study confirms that competition among strains can destabilize mutualism by favoring microbes that are superior in colonizing host tissues but provide minimal benefits to host plants. Moreover, our findings help resolve the paradox that despite efficient host control post infection, legumes nonetheless encounter rhizobia that vary in their nitrogen fixation.
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Affiliation(s)
- Arafat Rahman
- Institute of Integrative Genome Biology, University of California, Riverside, Riverside, CA 92521, USA
| | - Max Manci
- Department of Microbiology & Plant Pathology, University of California, Riverside, Riverside, CA 92521, USA
| | - Cassandra Nadon
- Department of Evolution Ecology & Organismal Biology, University of California, Riverside, Riverside, CA 92521, USA
| | - Ivan A Perez
- Department of Evolution Ecology & Organismal Biology, University of California, Riverside, Riverside, CA 92521, USA
| | - Warisha F Farsamin
- Department of Evolution Ecology & Organismal Biology, University of California, Riverside, Riverside, CA 92521, USA
| | - Matthew T Lampe
- Department of Evolution Ecology & Organismal Biology, University of California, Riverside, Riverside, CA 92521, USA
| | - Tram H Le
- Department of Evolution Ecology & Organismal Biology, University of California, Riverside, Riverside, CA 92521, USA
| | - Lorena Torres Martínez
- Department of Evolution Ecology & Organismal Biology, University of California, Riverside, Riverside, CA 92521, USA; Department of Biology, St. Mary's College of Maryland, St. Mary's City, MD 20686, USA
| | - Alexandra J Weisberg
- Department of Botany & Plant Pathology, Oregon State University, Corvallis, OR 97331, USA
| | - Jeff H Chang
- Department of Botany & Plant Pathology, Oregon State University, Corvallis, OR 97331, USA
| | - Joel L Sachs
- Institute of Integrative Genome Biology, University of California, Riverside, Riverside, CA 92521, USA; Department of Microbiology & Plant Pathology, University of California, Riverside, Riverside, CA 92521, USA; Department of Evolution Ecology & Organismal Biology, University of California, Riverside, Riverside, CA 92521, USA.
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14
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Hao K, Liu T, Hembry DH, Luo S. Trait matching in a multi-species geographic mosaic of leafflower plants, brood pollinators, and cheaters. Ecol Evol 2023; 13:e10228. [PMID: 37408629 PMCID: PMC10318581 DOI: 10.1002/ece3.10228] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/01/2023] [Revised: 06/06/2023] [Accepted: 06/09/2023] [Indexed: 07/07/2023] Open
Abstract
Trait matching between mutualistic species is usually expected to maintain mutualism, but empirical studies of trait complementarity and coadaptation in multi-species assemblages-which represent the reality of most interactions in nature-are few. Here, we studied trait matching between the leafflower shrub Kirganelia microcarpa and three associated seed-predatory leafflower moths (Epicephala spp.) across 16 populations. Behavioral and morphological observations suggested that two moths (E. microcarpa and E. tertiaria) acted as pollinators while a third (E. laeviclada) acted as a cheater. These species differed in ovipositor morphology but showed trait complementarity between ovipositor length and floral traits at both species level and population level, presumably as adaptations to divergent oviposition behaviors. However, this trait matching varied among populations. Comparisons of ovipositor length and floral traits among populations with different moth assemblages suggested an increase of ovary wall thickness where the locular-ovipositing pollinator E. microcarpa and cheater E. laeviclada were present, while stylar pit depth was less in populations with the stylar pit-ovipositing pollinator E. tertiaria. Our study indicates that trait matching between interacting partners occurs even in extremely specialized multi-species mutualisms, and that although these responses vary, sometimes non-intuitively, in response to different partner species. It seems that the moths can track changes in host plant tissue depth for oviposition.
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Affiliation(s)
- Kai Hao
- Key Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical GardenChinese Academy of ScienceGuangzhouChina
- South China National Botanical GardenGuangzhouChina
| | - Ting‐Ting Liu
- Key Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical GardenChinese Academy of ScienceGuangzhouChina
- South China National Botanical GardenGuangzhouChina
| | - David H. Hembry
- Department of BiologyUniversity of Texas Permian BasinOdessaTexasUSA
| | - Shi‐Xiao Luo
- Key Laboratory of Plant Resources Conservation and Sustainable Utilization, South China Botanical GardenChinese Academy of ScienceGuangzhouChina
- South China National Botanical GardenGuangzhouChina
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15
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Bshary R, Noë R. A marine cleaning mutualism provides new insights in biological market dynamics. Philos Trans R Soc Lond B Biol Sci 2023; 378:20210501. [PMID: 36934753 PMCID: PMC10024986 DOI: 10.1098/rstb.2021.0501] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2022] [Accepted: 01/22/2023] [Indexed: 03/21/2023] Open
Abstract
Most mutually beneficial social interactions (cooperation within species, mutualism between species) involve some degree of partner choice. In an analogy to economic theory as applied to human trading practices, biological market theory (BMT) focuses on how partner choice affects payoff distributions among non-human traders. BMT has inspired a great diversity of research, including research on the mutualism between cleaner fish Labroides dimidiatus and other marine fish, their 'clients'. In this mutualism, clients have ectoparasites removed and cleaners obtain food in return. We use the available data on L. dimidiatus cleaner-client interactions to identify avenues for future expansion of BMT. We focus on three main topics, namely how partner quality interacts with supply-to-demand ratios to affect service quality, the role of threats and forms of forceful intervention, and the potential role of cognition. We consider it essential to identify the specifics of each biological market as a basis for the development of more sophisticated BMT models. This article is part of the theme issue 'Half a century of evolutionary games: a synthesis of theory, application and future directions'.
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Affiliation(s)
- Redouan Bshary
- Institute of Biology, University of Neuchâtel, Emile-Argand 11, 2000 Neuchâtel, Switzerland
| | - Ronald Noë
- Department of Psychology, Tuk, The Netherlands and Arizona State University, Tempe, AZ 85287-1104, USA
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16
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Quides KW, Lee Y, Hur T, Atamian HS. Evaluation of qPCR to Detect Shifts in Population Composition of the Rhizobial Symbiont Mesorhizobium japonicum during Serial in Planta Transfers. BIOLOGY 2023; 12:biology12020277. [PMID: 36829553 PMCID: PMC9953586 DOI: 10.3390/biology12020277] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/14/2022] [Revised: 01/25/2023] [Accepted: 01/31/2023] [Indexed: 02/12/2023]
Abstract
Microbial symbionts range from mutualistic to commensal to antagonistic. While these roles are distinct in their outcome, they are also fluid in a changing environment. Here, we used the Lotus japonicus-Mesorhizobium japonicum symbiosis to investigate short-term and long-term shifts in population abundance using an effective, fast, and low-cost tracking methodology for M. japonicum. We use quantitative polymerase chain reaction (qPCR) to track previously generated signature-tagged M. japonicum mutants targeting the Tn5 transposon insertion and the flanking gene. We used a highly beneficial wild type and moderately beneficial and non-beneficial mutants of M. japonicum sp. nov. to demonstrate the specificity of these primers to estimate the relative abundance of each genotype within individual nodules and after serial transfers to new hosts. For the moderate and non-beneficial genotypes, qPCR allowed us to differentiate genotypes that are phenotypically indistinguishable and investigate host control with suboptimal symbionts. We consistently found the wild type increasing in the proportion of the population, but our data suggest a potential reproductive trade-off between the moderate and non-beneficial genotypes. The multi-generation framework we used, coupled with qPCR, can easily be scaled up to track dozens of M. japonicum mutants simultaneously. Moreover, these mutants can be used to explore M. japonicum genotype abundance in the presence of a complex soil community.
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Affiliation(s)
- Kenjiro W. Quides
- Biological Sciences Program, Schmid College of Science and Technology, Chapman University, Orange, CA 92866, USA
- Department of Microbiology and Molecular Genetics, University of California, Davis, CA 95616, USA
| | - Yoobeen Lee
- Biological Sciences Program, Schmid College of Science and Technology, Chapman University, Orange, CA 92866, USA
| | - Teresa Hur
- Biological Sciences Program, Schmid College of Science and Technology, Chapman University, Orange, CA 92866, USA
| | - Hagop S. Atamian
- Biological Sciences Program, Schmid College of Science and Technology, Chapman University, Orange, CA 92866, USA
- Correspondence:
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17
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Montoya AP, Wendlandt CE, Benedict AB, Roberts M, Piovia-Scott J, Griffitts JS, Porter SS. Hosts winnow symbionts with multiple layers of absolute and conditional discrimination mechanisms. Proc Biol Sci 2023; 290:20222153. [PMID: 36598018 PMCID: PMC9811631 DOI: 10.1098/rspb.2022.2153] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/05/2023] Open
Abstract
In mutualism, hosts select symbionts via partner choice and preferentially direct more resources to symbionts that provide greater benefits via sanctions. At the initiation of symbiosis, prior to resource exchange, it is not known how the presence of multiple symbiont options (i.e. the symbiont social environment) impacts partner choice outcomes. Furthermore, little research addresses whether hosts primarily discriminate among symbionts via sanctions, partner choice or a combination. We inoculated the legume, Acmispon wrangelianus, with 28 pairs of fluorescently labelled Mesorhizobium strains that vary continuously in quality as nitrogen-fixing symbionts. We find that hosts exert robust partner choice, which enhances their fitness. This partner choice is conditional such that a strain's success in initiating nodules is impacted by other strains in the social environment. This social genetic effect is as important as a strain's own genotype in determining nodulation and has both transitive (consistent) and intransitive (idiosyncratic) effects on the probability that a symbiont will form a nodule. Furthermore, both absolute and conditional partner choice act in concert with sanctions, among and within nodules. Thus, multiple forms of host discrimination act as a series of sieves that optimize host benefits and select for costly symbiont cooperation in mixed symbiont populations.
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Affiliation(s)
- Angeliqua P. Montoya
- School of Biological Sciences, Washington State University, Vancouver, WA 98686, USA
| | - Camille E. Wendlandt
- School of Biological Sciences, Washington State University, Vancouver, WA 98686, USA
| | - Alex B. Benedict
- Department of Microbiology and Molecular Biology, Brigham Young University, Provo, UT 84602, USA
| | - Miles Roberts
- School of Biological Sciences, Washington State University, Vancouver, WA 98686, USA
| | - Jonah Piovia-Scott
- School of Biological Sciences, Washington State University, Vancouver, WA 98686, USA
| | - Joel S. Griffitts
- Department of Microbiology and Molecular Biology, Brigham Young University, Provo, UT 84602, USA
| | - Stephanie S. Porter
- School of Biological Sciences, Washington State University, Vancouver, WA 98686, USA
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18
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Genome-Wide Association Studies across Environmental and Genetic Contexts Reveal Complex Genetic Architecture of Symbiotic Extended Phenotypes. mBio 2022; 13:e0182322. [PMID: 36286519 PMCID: PMC9765617 DOI: 10.1128/mbio.01823-22] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
A goal of modern biology is to develop the genotype-phenotype (G→P) map, a predictive understanding of how genomic information generates trait variation that forms the basis of both natural and managed communities. As microbiome research advances, however, it has become clear that many of these traits are symbiotic extended phenotypes, being governed by genetic variation encoded not only by the host's own genome, but also by the genomes of myriad cryptic symbionts. Building a reliable G→P map therefore requires accounting for the multitude of interacting genes and even genomes involved in symbiosis. Here, we use naturally occurring genetic variation in 191 strains of the model microbial symbiont Sinorhizobium meliloti paired with two genotypes of the host Medicago truncatula in four genome-wide association studies (GWAS) to determine the genomic architecture of a key symbiotic extended phenotype-partner quality, or the fitness benefit conferred to a host by a particular symbiont genotype, within and across environmental contexts and host genotypes. We define three novel categories of loci in rhizobium genomes that must be accounted for if we want to build a reliable G→P map of partner quality; namely, (i) loci whose identities depend on the environment, (ii) those that depend on the host genotype with which rhizobia interact, and (iii) universal loci that are likely important in all or most environments. IMPORTANCE Given the rapid rise of research on how microbiomes can be harnessed to improve host health, understanding the contribution of microbial genetic variation to host phenotypic variation is pressing, and will better enable us to predict the evolution of (and select more precisely for) symbiotic extended phenotypes that impact host health. We uncover extensive context-dependency in both the identity and functions of symbiont loci that control host growth, which makes predicting the genes and pathways important for determining symbiotic outcomes under different conditions more challenging. Despite this context-dependency, we also resolve a core set of universal loci that are likely important in all or most environments, and thus, serve as excellent targets both for genetic engineering and future coevolutionary studies of symbiosis.
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19
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Ene I, Wong KKY, Salali GD. Is it good to be bad? An evolutionary analysis of the adaptive potential of psychopathic traits. EVOLUTIONARY HUMAN SCIENCES 2022; 4:e37. [PMID: 37588932 PMCID: PMC10426111 DOI: 10.1017/ehs.2022.36] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
Although psychopathy is widely conceptualised as a mental disorder, some researchers question the maladaptive nature of psychopathy, and argue that it might be advantageous from an evolutionary point of view. According to this view, psychopathy can be seen as an evolutionary adaptative strategy that relies on deception and manipulation to gain short-term reproductive benefits. Psychopathy is also identified as a fast life strategy in response to early life stress and an adaptation to harsh environments. This paper investigates the evidence that psychopathic traits are adaptive, while also addressing the limitations of current evolutionary models of psychopathy based on frequency-dependent selection and life history theory. We review recent studies on the fitness correlates of psychopathy and find that psychopathic traits present potential adaptive trade-offs between fertility and mortality, and offspring quantity and quality. On a proximate level, individual differences in stress reactivity and environmental risk factors in early development predispose to psychopathy through gene-environment interactions. We propose that environmental, developmental, social and cultural factors can mediate the relationship between psychopathic traits and fitness and therefore should be considered to make accurate predictions on the adaptive potential of psychopathy. We end by outlining gaps in the literature and making recommendations for future evolutionary research on psychopathy.
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Affiliation(s)
- Ioana Ene
- Department of Anthropology, University College London, 14 Taviton Street, London WC1H 0BW, UK
| | - Keri Ka-Yee Wong
- Department of Psychology and Human Development, University College London, 25 Woburn Square, London WC1H 0AA, UK
| | - Gul Deniz Salali
- Department of Anthropology, University College London, 14 Taviton Street, London WC1H 0BW, UK
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20
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Batstone RT, Burghardt LT, Heath KD. Phenotypic and genomic signatures of interspecies cooperation and conflict in naturally occurring isolates of a model plant symbiont. Proc Biol Sci 2022; 289:20220477. [PMID: 35858063 PMCID: PMC9277234 DOI: 10.1098/rspb.2022.0477] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022] Open
Abstract
Given the need to predict the outcomes of (co)evolution in host-associated microbiomes, whether microbial and host fitnesses tend to trade-off, generating conflict, remains a pressing question. Examining the relationships between host and microbe fitness proxies at both the phenotypic and genomic levels can illuminate the mechanisms underlying interspecies cooperation and conflict. We examined naturally occurring genetic variation in 191 strains of the model microbial symbiont Sinorhizobium meliloti, paired with each of two host Medicago truncatula genotypes in single- or multi-strain experiments to determine how multiple proxies of microbial and host fitness were related to one another and test key predictions about mutualism evolution at the genomic scale, while also addressing the challenge of measuring microbial fitness. We found little evidence for interspecies fitness conflict; loci tended to have concordant effects on both microbe and host fitnesses, even in environments with multiple co-occurring strains. Our results emphasize the importance of quantifying microbial relative fitness for understanding microbiome evolution and thus harnessing microbiomes to improve host fitness. Additionally, we find that mutualistic coevolution between hosts and microbes acts to maintain, rather than erode, genetic diversity, potentially explaining why variation in mutualism traits persists in nature.
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Affiliation(s)
- Rebecca T. Batstone
- Carl R. Woese Institute for Genomic Biology, University of Illinois at Urbana-Champaign, 1206 West Gregory Drive, Urbana, IL 61801, USA
| | - Liana T. Burghardt
- Department of Plant Science, The Pennsylvania State University, 103 Tyson Building, University Park, PA, 16802 USA
| | - Katy D. Heath
- Department of Plant Biology, University of Illinois at Urbana-Champaign, 286 Morrill Hall, 505 South Goodwin Avenue, Urbana, IL 61801, USA
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21
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Hale KRS, Valdovinos FS. Ecological theory of mutualism: Robust patterns of stability and thresholds in two-species population models. Ecol Evol 2021; 11:17651-17671. [PMID: 35003630 PMCID: PMC8717353 DOI: 10.1002/ece3.8453] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Accepted: 11/29/2021] [Indexed: 11/08/2022] Open
Abstract
Mutualisms are ubiquitous in nature, provide important ecosystem services, and involve many species of interest for conservation. Theoretical progress on the population dynamics of mutualistic interactions, however, comparatively lagged behind that of trophic and competitive interactions, leading to the impression that ecologists still lack a generalized framework to investigate the population dynamics of mutualisms. Yet, over the last 90 years, abundant theoretical work has accumulated, ranging from abstract to detailed. Here, we review and synthesize historical models of two-species mutualisms. We find that population dynamics of mutualisms are qualitatively robust across derivations, including levels of detail, types of benefit, and inspiring systems. Specifically, mutualisms tend to exhibit stable coexistence at high density and destabilizing thresholds at low density. These dynamics emerge when benefits of mutualism saturate, whether due to intrinsic or extrinsic density dependence in intraspecific processes, interspecific processes, or both. We distinguish between thresholds resulting from Allee effects, low partner density, and high partner density, and their mathematical and conceptual causes. Our synthesis suggests that there exists a robust population dynamic theory of mutualism that can make general predictions.
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Affiliation(s)
- Kayla R. S. Hale
- Department of Ecology and Evolutionary BiologyUniversity of MichiganAnn ArborMichiganUSA
| | - Fernanda S. Valdovinos
- Department of Environmental Science and PolicyUniversity of CaliforniaDavisCaliforniaUSA
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22
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Abstract
The success of many viruses depends upon cooperative interactions between viral genomes. However, whenever cooperation occurs, there is the potential for 'cheats' to exploit that cooperation. We suggest that: (1) the biology of viruses makes viral cooperation particularly susceptible to cheating; (2) cheats are common across a wide range of viruses, including viral entities that are already well studied, such as defective interfering genomes, and satellite viruses. Consequently, the evolutionary theory of cheating could help us understand and manipulate viral dynamics, while viruses also offer new opportunities to study the evolution of cheating.
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Affiliation(s)
- Asher Leeks
- Department of Zoology, University of Oxford, Oxford, OX1 3PS, UK.
| | - Stuart A West
- Department of Zoology, University of Oxford, Oxford, OX1 3PS, UK
| | - Melanie Ghoul
- Department of Zoology, University of Oxford, Oxford, OX1 3PS, UK
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23
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Cao L, Jansen PA, Wang B, Yan C, Wang Z, Chen J. Mutual cheating strengthens a tropical seed dispersal mutualism. Ecology 2021; 103:e03574. [PMID: 34706058 DOI: 10.1002/ecy.3574] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Revised: 04/16/2021] [Accepted: 07/07/2021] [Indexed: 11/07/2022]
Abstract
While cheating can cause the degradation or collapse of mutualisms, mutualisms may theoretically stabilize or strengthen if the cheating is mutual. Here, we present an asymmetric two-player game model to explore the evolutionary dynamics of mutual cheating in a mutualistic interaction. We found that the interaction evolved towards mutual cheating if cheating can help both partners obtain higher benefits or if counter-cheating yields more benefits to victims than simply tolerating exploitation by partners. Then, we present empirical evidence for such mutual cheating strengthening a seed dispersal mutualism in which rodents disperse seeds by scatter hoarding, rodents sabotage seed germination by pruning radicles, and seeds escape rodents by resprouting. By tracking >8000 Pittosporopsis kerrii seeds throughout the dispersal process in a tropical forest in southwest China, we found that rodents provided better dispersal to seeds that they pruned, i.e., pruned seeds were dispersed farther and were more likely to establish seedlings than unpruned seeds. Compared to unpruned seeds, pruned seeds retained more of their nutrients, i.e., dry mass of pruned seeds was greater than that of unpruned seeds, and were stored for longer by rodents. These findings indicate that mutual cheating benefited both partners. Payoffs estimated from the field experiments indicated that mutual cheating was indeed favored in rodents and plants P. kerrii, and that neither partner was enslaved by the other under mutual cheating. Rather, the mutualism remained stable because the partners were able to exploit each other, and each partner attempted to gain the maximum benefits from the interaction. Our findings indicate that mutual cheating between two mutualists can enhance and stabilize mutualisms.
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Affiliation(s)
- Lin Cao
- School of Ecology and Environmental Science, Yunnan University, Kunming, 650091, China.,Center for Integrative Conservation, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan, 666303, China.,State Key Laboratory of Integrated Management of Pest Insects and Rodents in Agriculture, Institute of Zoology, Chinese Academy of Sciences (CAS), Beijing, 100101, China
| | - Patrick A Jansen
- Department of Environmental Sciences, Wageningen University, PO Box 47, 6700 AA, Wageningen, The Netherlands.,Smithsonian Tropical Research Institute, Apartado, 0843-03092, Republic of Panama
| | - Bo Wang
- Center for Integrative Conservation, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan, 666303, China.,School of Resources and Environmental Engineering, Anhui University, Hefei, 230601, China
| | - Chuan Yan
- State Key Laboratory of Integrated Management of Pest Insects and Rodents in Agriculture, Institute of Zoology, Chinese Academy of Sciences (CAS), Beijing, 100101, China.,State Key Laboratory of Grassland Agro-ecosystem, Institute of Innovation Ecology & College of Life Sciences, Lanzhou University, Lanzhou, 730000, China
| | - Zhenyu Wang
- College of Life Sciences, Jiangxi Normal University, Nanchang, 330022, China
| | - Jin Chen
- Center for Integrative Conservation, Xishuangbanna Tropical Botanical Garden, Chinese Academy of Sciences, Mengla, Yunnan, 666303, China
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24
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Zeng Y, Wiens JJ. Do mutualistic interactions last longer than antagonistic interactions? Proc Biol Sci 2021; 288:20211457. [PMID: 34493078 PMCID: PMC8424312 DOI: 10.1098/rspb.2021.1457] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Accepted: 08/13/2021] [Indexed: 11/12/2022] Open
Abstract
Species interactions are crucial and ubiquitous across organisms. However, it remains unclear how long these interactions last over macroevolutionary timescales, and whether the nature of these interactions (mutualistic versus antagonistic) helps predict how long they persist. Here, we estimated the ages of diverse species interactions, based on phylogenies from 60 studies spanning the Tree of Life. We then tested if mutualistic interactions persist longer than antagonistic interactions. We found that the oldest mutualisms were significantly older than the oldest antagonisms across all organisms, and within plants, fungi, bacteria and protists. Surprisingly, this pattern was reversed in animals, with the oldest mutualisms significantly younger than the oldest antagonisms. We also found that many mutualisms were maintained for hundreds of millions of years (some greater than 1 billion years), providing strong evidence for the long-term stability of mutualisms and for niche conservatism in species interactions.
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Affiliation(s)
- Yichao Zeng
- Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA
| | - John J. Wiens
- Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA
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25
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The evolution of parasitism from mutualism in wasps pollinating the fig, Ficus microcarpa, in Yunnan Province, China. Proc Natl Acad Sci U S A 2021; 118:2021148118. [PMID: 34341115 DOI: 10.1073/pnas.2021148118] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
Theory identifies factors that can undermine the evolutionary stability of mutualisms. However, theory's relevance to mutualism stability in nature is controversial. Detailed comparative studies of parasitic species that are embedded within otherwise mutualistic taxa (e.g., fig pollinator wasps) can identify factors that potentially promote or undermine mutualism stability. We describe results from behavioral, morphological, phylogenetic, and experimental studies of two functionally distinct, but closely related, Eupristina wasp species associated with the monoecious host fig, Ficus microcarpa, in Yunnan Province, China. One (Eupristina verticillata) is a competent pollinator exhibiting morphologies and behaviors consistent with observed seed production. The other (Eupristina sp.) lacks these traits, and dramatically reduces both female and male reproductive success of its host. Furthermore, observations and experiments indicate that individuals of this parasitic species exhibit greater relative fitness than the pollinators, in both indirect competition (individual wasps in separate fig inflorescences) and direct competition (wasps of both species within the same fig). Moreover, phylogenetic analyses suggest that these two Eupristina species are sister taxa. By the strictest definition, the nonpollinating species represents a "cheater" that has descended from a beneficial pollinating mutualist. In sharp contrast to all 15 existing studies of actively pollinated figs and their wasps, the local F. microcarpa exhibit no evidence for host sanctions that effectively reduce the relative fitness of wasps that do not pollinate. We suggest that the lack of sanctions in the local hosts promotes the loss of specialized morphologies and behaviors crucial for pollination and, thereby, the evolution of cheating.
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26
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Konstantinidis D, Pereira F, Geissen E, Grkovska K, Kafkia E, Jouhten P, Kim Y, Devendran S, Zimmermann M, Patil KR. Adaptive laboratory evolution of microbial co-cultures for improved metabolite secretion. Mol Syst Biol 2021; 17:e10189. [PMID: 34370382 PMCID: PMC8351387 DOI: 10.15252/msb.202010189] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/22/2020] [Revised: 07/02/2021] [Accepted: 07/07/2021] [Indexed: 12/13/2022] Open
Abstract
Adaptive laboratory evolution has proven highly effective for obtaining microorganisms with enhanced capabilities. Yet, this method is inherently restricted to the traits that are positively linked to cell fitness, such as nutrient utilization. Here, we introduce coevolution of obligatory mutualistic communities for improving secretion of fitness-costly metabolites through natural selection. In this strategy, metabolic cross-feeding connects secretion of the target metabolite, despite its cost to the secretor, to the survival and proliferation of the entire community. We thus co-evolved wild-type lactic acid bacteria and engineered auxotrophic Saccharomyces cerevisiae in a synthetic growth medium leading to bacterial isolates with enhanced secretion of two B-group vitamins, viz., riboflavin and folate. The increased production was specific to the targeted vitamin, and evident also in milk, a more complex nutrient environment that naturally contains vitamins. Genomic, proteomic and metabolomic analyses of the evolved lactic acid bacteria, in combination with flux balance analysis, showed altered metabolic regulation towards increased supply of the vitamin precursors. Together, our findings demonstrate how microbial metabolism adapts to mutualistic lifestyle through enhanced metabolite exchange.
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Affiliation(s)
- Dimitrios Konstantinidis
- Structural and Computational Biology UnitEuropean Molecular Biology LaboratoryHeidelbergGermany
- Faculty of BiosciencesHeidelberg UniversityHeidelbergGermany
| | - Filipa Pereira
- Structural and Computational Biology UnitEuropean Molecular Biology LaboratoryHeidelbergGermany
- Present address:
Life Science InstituteUniversity of MichiganAnn ArborUSA
| | - Eva‐Maria Geissen
- Structural and Computational Biology UnitEuropean Molecular Biology LaboratoryHeidelbergGermany
| | - Kristina Grkovska
- Structural and Computational Biology UnitEuropean Molecular Biology LaboratoryHeidelbergGermany
| | - Eleni Kafkia
- Structural and Computational Biology UnitEuropean Molecular Biology LaboratoryHeidelbergGermany
- Medical Research Council Toxicology UnitCambridgeUK
| | - Paula Jouhten
- VTT Technical Research Centre of Finland LtdEspooFinland
| | - Yongkyu Kim
- Structural and Computational Biology UnitEuropean Molecular Biology LaboratoryHeidelbergGermany
- Present address:
Brain Research InstituteKorea Institute of Research and TechnologySeoulSouth Korea
| | - Saravanan Devendran
- Structural and Computational Biology UnitEuropean Molecular Biology LaboratoryHeidelbergGermany
| | - Michael Zimmermann
- Structural and Computational Biology UnitEuropean Molecular Biology LaboratoryHeidelbergGermany
| | - Kiran Raosaheb Patil
- Structural and Computational Biology UnitEuropean Molecular Biology LaboratoryHeidelbergGermany
- Medical Research Council Toxicology UnitCambridgeUK
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Kaup M, Trull S, Hom EFY. On the move: sloths and their epibionts as model mobile ecosystems. Biol Rev Camb Philos Soc 2021; 96:2638-2660. [PMID: 34309191 PMCID: PMC9290738 DOI: 10.1111/brv.12773] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2018] [Revised: 06/18/2021] [Accepted: 06/21/2021] [Indexed: 12/20/2022]
Abstract
Sloths are unusual mobile ecosystems, containing a high diversity of epibionts living and growing in their fur as they climb slowly through the canopies of tropical forests. These epibionts include poorly studied algae, arthropods, fungi, and bacteria, making sloths likely reservoirs of unexplored biodiversity. This review aims to identify gaps and eliminate misconceptions in our knowledge of sloths and their epibionts, and to identify key questions to stimulate future research into the functions and roles of sloths within a broader ecological and evolutionary context. This review also seeks to position the sloth fur ecosystem as a model for addressing fundamental questions in metacommunity and movement ecology. The conceptual and evidence-based foundation of this review aims to serve as a guide for future hypothesis-driven research into sloths, their microbiota, sloth health and conservation, and the coevolution of symbioses in general.
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Affiliation(s)
- Maya Kaup
- Department of Biology and Center for Biodiversity and Conservation Research, University of Mississippi, University, MS, 38677-1848, U.S.A
| | - Sam Trull
- The Sloth Institute, Tulemar Gardens, Provincia de Puntarenas, Manuel Antonio, 60601, Costa Rica
| | - Erik F Y Hom
- Department of Biology and Center for Biodiversity and Conservation Research, University of Mississippi, University, MS, 38677-1848, U.S.A
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28
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Week B, Nuismer SL. Coevolutionary Arms Races and the Conditions for the Maintenance of Mutualism. Am Nat 2021; 198:195-205. [PMID: 34260869 DOI: 10.1086/714274] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Abstract
AbstractEmpirical evidence suggests that coevolutionary arms races between flowering plants and their pollinators can occur in wild populations. In extreme cases, trait escalation may result in evolutionary switching from mutualism to parasitism. However, theoretical approaches to studying coevolution typically assume fixed types of ecological interactions and ignore the evolution of absolute fitness. Here, we introduce a novel approach to track the evolution of absolute fitness as a framework to determine when escalatory coevolution results in a switch from mutualism to parasitism. We apply our approach to two previously studied mechanisms mediating selection as a function of phenotype. Our results demonstrate that interactions mediated by a "bigger-is-better" mechanism evolve toward parasitism. In contrast, generalizing the classical trait-matching mechanism so that the fitness of each species is optimized when trait values mismatch by a particular amount, we find theoretical support for indefinite trait exaggeration that preserves mutualistic interactions. Building on our results, we discuss the consequences of coevolutionary arms races for the maintenance of cheating. Moving beyond pairwise interactions, we consider the ramifications of coevolution in a South African pollination network for the evolution of parasitism. Future work extending our approach beyond pairwise interactions can lead to a framework for understanding the evolution of parasitism in mutualistic networks and further insights into the structure and dynamic nature of ecological communities in general.
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29
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Afkhami ME, Friesen ML, Stinchcombe JR. Multiple Mutualism Effects generate synergistic selection and strengthen fitness alignment in the interaction between legumes, rhizobia and mycorrhizal fungi. Ecol Lett 2021; 24:1824-1834. [PMID: 34110064 DOI: 10.1111/ele.13814] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2021] [Accepted: 05/02/2021] [Indexed: 01/05/2023]
Abstract
Nearly all organisms participate in multiple mutualisms, and complementarity within these complex interactions can result in synergistic fitness effects. However, it remains largely untested how multiple mutualisms impact eco-evolutionary dynamics in interacting species. We tested how multiple microbial mutualists-N-fixing bacteria and mycorrrhizal fungi-affected selection and heritability of traits in their shared host plant (Medicago truncatula), as well as fitness alignment between partners. Our results demonstrate for the first time that multiple mutualisms synergistically affect the selection and heritability of host traits and enhance fitness alignment between mutualists. Specifically, we found interaction with multiple microbial symbionts doubled the strength of natural selection on a plant architectural trait, resulted in 2- to 3-fold higher heritability of plant reproductive success, and more than doubled fitness alignment between N-fixing bacteria and plants. These findings show synergism generated by multiple mutualisms extends to key components of microevolutionary change, emphasising the importance of multiple mutualism effects on evolutionary trajectories.
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Affiliation(s)
| | - Maren L Friesen
- Department of Plant Pathology, Department of Crop and Soil Sciences, Washington State University, Pullman, WA, USA
| | - John R Stinchcombe
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON, Canada
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30
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O'Brien AM, Jack CN, Friesen ML, Frederickson ME. Whose trait is it anyways? Coevolution of joint phenotypes and genetic architecture in mutualisms. Proc Biol Sci 2021; 288:20202483. [PMID: 33434463 DOI: 10.1098/rspb.2020.2483] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022] Open
Abstract
Evolutionary biologists typically envision a trait's genetic basis and fitness effects occurring within a single species. However, traits can be determined by and have fitness consequences for interacting species, thus evolving in multiple genomes. This is especially likely in mutualisms, where species exchange fitness benefits and can associate over long periods of time. Partners may experience evolutionary conflict over the value of a multi-genomic trait, but such conflicts may be ameliorated by mutualism's positive fitness feedbacks. Here, we develop a simulation model of a host-microbe mutualism to explore the evolution of a multi-genomic trait. Coevolutionary outcomes depend on whether hosts and microbes have similar or different optimal trait values, strengths of selection and fitness feedbacks. We show that genome-wide association studies can map joint traits to loci in multiple genomes and describe how fitness conflict and fitness feedback generate different multi-genomic architectures with distinct signals around segregating loci. Partner fitnesses can be positively correlated even when partners are in conflict over the value of a multi-genomic trait, and conflict can generate strong mutualistic dependency. While fitness alignment facilitates rapid adaptation to a new optimum, conflict maintains genetic variation and evolvability, with implications for applied microbiome science.
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Affiliation(s)
- Anna M O'Brien
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, Canada
| | - Chandra N Jack
- Department of Plant Pathology, Washington State University, Pullman, Washington, USA
| | - Maren L Friesen
- Department of Plant Pathology, Washington State University, Pullman, Washington, USA.,Department of Crop and Soil Sciences, Washington State University, Pullman, Washington, USA
| | - Megan E Frederickson
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, Canada
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31
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García-Contreras R, Loarca D. The bright side of social cheaters: potential beneficial roles of "social cheaters" in microbial communities. FEMS Microbiol Ecol 2020; 97:6006265. [PMID: 33238304 DOI: 10.1093/femsec/fiaa239] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2020] [Accepted: 11/23/2020] [Indexed: 11/13/2022] Open
Abstract
Cooperation in microbial communities via production of public goods is susceptible to social cheating, since selfish individuals that do not contribute to their synthesis but benefit from their production thrive in the presence of cooperators. This behavior has been observed in the laboratory using bacterial and yeast models. Moreover, growing evidence indicates that cheating is frequent in natural microbial communities. In the laboratory, social cheating can promote population collapse or "tragedy of the commons" when excessive. Nevertheless, there are diverse mechanisms that counteract cheating in microbes, as well as theoretical and experimental evidence that suggests possible beneficial roles of social cheaters for the microbial populations. In this mini review manuscript we compile and discuss such possible roles.
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Affiliation(s)
- Rodolfo García-Contreras
- Departamento de Microbiología y Parasitología, Facultad de Medicina, Universidad Nacional Autonoma de México, Circuto Escolar 411A, Copilco Universidad, Coyoacán, 04360, Mexico City, Mexico
| | - Daniel Loarca
- Departamento de Microbiología y Parasitología, Facultad de Medicina, Universidad Nacional Autonoma de México, Circuto Escolar 411A, Copilco Universidad, Coyoacán, 04360, Mexico City, Mexico
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32
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Chomicki G, Kiers ET, Renner SS. The Evolution of Mutualistic Dependence. ANNUAL REVIEW OF ECOLOGY EVOLUTION AND SYSTEMATICS 2020. [DOI: 10.1146/annurev-ecolsys-110218-024629] [Citation(s) in RCA: 42] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Abstract
While the importance of mutualisms across the tree of life is recognized, it is not understood why some organisms evolve high levels of dependence on mutualistic partnerships, while other species remain autonomous or retain or regain minimal dependence on partners. We identify four main pathways leading to the evolution of mutualistic dependence. Then, we evaluate current evidence for three predictions: ( a) Mutualisms with different levels of dependence have distinct stabilizing mechanisms against exploitation and cheating, ( b) less dependent mutualists will return to autonomy more often than those that are highly dependent, and ( c) obligate mutualisms should be less context dependent than facultative ones. Although we find evidence supporting all three predictions, we stress that mutualistic partners follow diverse paths toward—and away from—dependence. We also highlight the need to better examine asymmetry in partner dependence. Recognizing how variation in dependence influences the stability, breakdown, and context dependence of mutualisms generates new hypotheses regarding how and why the benefits of mutualistic partnerships differ over time and space.
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Affiliation(s)
- Guillaume Chomicki
- Department of Bioscience, Durham University, Durham DH1 3LE, United Kingdom
| | - E. Toby Kiers
- Department of Ecological Science, Vrije Universiteit, 1081 HV Amsterdam, The Netherlands
| | - Susanne S. Renner
- Systematic Botany and Mycology, Department of Biology, University of Munich (LMU), 80638 Munich, Germany
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33
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Stoy KS, Gibson AK, Gerardo NM, Morran LT. A need to consider the evolutionary genetics of host-symbiont mutualisms. J Evol Biol 2020; 33:1656-1668. [PMID: 33047414 DOI: 10.1111/jeb.13715] [Citation(s) in RCA: 16] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2020] [Revised: 09/20/2020] [Accepted: 09/27/2020] [Indexed: 12/28/2022]
Abstract
Despite the ubiquity and importance of mutualistic interactions, we know little about the evolutionary genetics underlying their long-term persistence. As in antagonistic interactions, mutualistic symbioses are characterized by substantial levels of phenotypic and genetic diversity. In contrast to antagonistic interactions, however, we, by and large, do not understand how this variation arises, how it is maintained, nor its implications for future evolutionary change. Currently, we rely on phenotypic models to address the persistence of mutualistic symbioses, but the success of an interaction almost certainly depends heavily on genetic interactions. In this review, we argue that evolutionary genetic models could provide a framework for understanding the causes and consequences of diversity and why selection may favour processes that maintain variation in mutualistic interactions.
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Affiliation(s)
- Kayla S Stoy
- Department of Biology, Emory University, Atlanta, GA, USA.,Population Biology, Ecology, and Evolution Program, Division of Biological and Biomedical Sciences, Emory University, Atlanta, GA, USA
| | - Amanda K Gibson
- Department of Biology, University of Virginia, Charlottesville, VA, USA
| | | | - Levi T Morran
- Department of Biology, Emory University, Atlanta, GA, USA
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34
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Vidal MC, Wang SP, Rivers DM, Althoff DM, Segraves KA. Species richness and redundancy promote persistence of exploited
mutualisms in yeast. Science 2020; 370:346-350. [DOI: 10.1126/science.abb6703] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2020] [Revised: 06/26/2020] [Accepted: 08/26/2020] [Indexed: 01/21/2023]
Abstract
Mutualisms, or reciprocally beneficial interspecific interactions,
constitute the foundation of many ecological communities and agricultural
systems. Mutualisms come in different forms, from pairwise interactions to
extremely diverse communities, and they are continually challenged with
exploitation by nonmutualistic community members (exploiters). Thus,
understanding how mutualisms persist remains an essential question in
ecology. Theory suggests that high species richness and functional
redundancy could promote mutualism persistence in complex mutualistic
communities. Using a yeast system (Saccharomyces
cerevisiae), we experimentally show that communities with
the greatest mutualist richness and functional redundancy are nearly two
times more likely to survive exploitation than are simple communities.
Persistence increased because diverse communities were better able to
mitigate the negative effects of competition with exploiters. Thus, large
mutualistic networks may be inherently buffered from exploitation.
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Affiliation(s)
- Mayra C. Vidal
- Department of Biology, Syracuse University, Syracuse, NY 13210, USA
- Biology Department, University of Massachusetts Boston, Boston, MA 02125, USA
| | - Sheng Pei Wang
- Department of Biology, Syracuse University, Syracuse, NY 13210, USA
| | | | - David M. Althoff
- Department of Biology, Syracuse University, Syracuse, NY 13210, USA
| | - Kari A. Segraves
- Department of Biology, Syracuse University, Syracuse, NY 13210, USA
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Abstract
Plant pathogens are a critical component of the microbiome that exist as populations undergoing ecological and evolutionary processes within their host. Many aspects of virulence rely on social interactions mediated through multiple forms of public goods, including quorum-sensing signals, exoenzymes, and effectors. Virulence and disease progression involve life-history decisions that have social implications with large effects on both host and microbe fitness, such as the timing of key transitions. Considering the molecular basis of sequential stages of plant-pathogen interactions highlights many opportunities for pathogens to cheat, and there is evidence for ample variation in virulence. Case studies reveal systems where cheating has been demonstrated and others where it is likely occurring. Harnessing the social interactions of pathogens, along with leveraging novel sensing and -omics technologies to understand microbial fitness in the field, will enable us to better manage plant microbiomes in the interest of plant health.
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Affiliation(s)
- Maren L Friesen
- Department of Plant Pathology and Department of Crop and Soil Sciences, Washington State University, Pullman, Washington 99164, USA;
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36
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Younginger BS, Friesen ML. Connecting signals and benefits through partner choice in plant-microbe interactions. FEMS Microbiol Lett 2020; 366:5626345. [PMID: 31730203 DOI: 10.1093/femsle/fnz217] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2018] [Accepted: 10/17/2019] [Indexed: 12/20/2022] Open
Abstract
Stabilizing mechanisms in plant-microbe symbioses are critical to maintaining beneficial functions, with two main classes: host sanctions and partner choice. Sanctions are currently presumed to be more effective and widespread, based on the idea that microbes rapidly evolve cheating while retaining signals matching cooperative strains. However, hosts that effectively discriminate among a pool of compatible symbionts would gain a significant fitness advantage. Using the well-characterized legume-rhizobium symbiosis as a model, we evaluate the evidence for partner choice in the context of the growing field of genomics. Empirical studies that rely upon bacteria varying only in nitrogen-fixation ability ignore host-symbiont signaling and frequently conclude that partner choice is not a robust stabilizing mechanism. Here, we argue that partner choice is an overlooked mechanism of mutualism stability and emphasize that plants need not use the microbial services provided a priori to discriminate among suitable partners. Additionally, we present a model that shows that partner choice signaling increases symbiont and host fitness in the absence of sanctions. Finally, we call for a renewed focus on elucidating the signaling mechanisms that are critical to partner choice while further aiming to understand their evolutionary dynamics in nature.
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Affiliation(s)
- Brett S Younginger
- Department of Plant Pathology, Washington State University, PO Box 646430, 345 Johnson Hall, Pullman, WA 99164, USA
| | - Maren L Friesen
- Department of Plant Pathology, Washington State University, PO Box 646430, 345 Johnson Hall, Pullman, WA 99164, USA.,Department of Crop and Soil Sciences, Washington State University, PO Box 646420, 115 Johnson Hall, Pullman, WA 99164, USA
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37
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Perez-Lamarque B, Selosse MA, Öpik M, Morlon H, Martos F. Cheating in arbuscular mycorrhizal mutualism: a network and phylogenetic analysis of mycoheterotrophy. THE NEW PHYTOLOGIST 2020; 226:1822-1835. [PMID: 32022272 DOI: 10.1111/nph.16474] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/02/2019] [Accepted: 01/20/2020] [Indexed: 05/27/2023]
Abstract
Although mutualistic interactions are widespread and essential in ecosystem functioning, the emergence of uncooperative cheaters threatens their stability, unless there are some physiological or ecological mechanisms limiting interactions with cheaters. In this framework, we investigated the patterns of specialization and phylogenetic distribution of mycoheterotrophic cheaters vs noncheating autotrophic plants and their respective fungi, in a global arbuscular mycorrhizal network with> 25 000 interactions. We show that mycoheterotrophy evolved repeatedly among vascular plants, suggesting low phylogenetic constraints for plants. However, mycoheterotrophic plants are significantly more specialized than autotrophic plants, and they tend to be associated with specialized and closely related fungi. These results raise new hypotheses about the mechanisms (e.g. sanctions, or habitat filtering) that actually limit the interaction of mycoheterotrophic plants and their associated fungi with the rest of the autotrophic plants. Beyond mycorrhizal symbiosis, this unprecedented comparison of mycoheterotrophic vs autotrophic plants provides a network and phylogenetic framework to assess the presence of constraints upon cheating emergences in mutualisms.
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Affiliation(s)
- Benoît Perez-Lamarque
- Institut de Systématique, Évolution, Biodiversité (ISYEB), Muséum national d'histoire naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, CP39, 57 rue Cuvier, 75 005, Paris, France
- Institut de Biologie de l'École Normale Supérieure (IBENS), École Normale Supérieure, CNRS, INSERM, Université PSL, 46 rue d'Ulm, 75 005, Paris, France
| | - Marc-André Selosse
- Institut de Systématique, Évolution, Biodiversité (ISYEB), Muséum national d'histoire naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, CP39, 57 rue Cuvier, 75 005, Paris, France
- Department of Plant Taxonomy and Nature Conservation, University of Gdansk, Wita Stwosza 59, 80-308, Gdansk, Poland
| | - Maarja Öpik
- University of Tartu, 40 Lai Street, 51 005, Tartu, Estonia
| | - Hélène Morlon
- Institut de Biologie de l'École Normale Supérieure (IBENS), École Normale Supérieure, CNRS, INSERM, Université PSL, 46 rue d'Ulm, 75 005, Paris, France
| | - Florent Martos
- Institut de Systématique, Évolution, Biodiversité (ISYEB), Muséum national d'histoire naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, CP39, 57 rue Cuvier, 75 005, Paris, France
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38
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Gundel PE, Sun P, Charlton ND, Young CA, Miller TEX, Rudgers JA. Simulated folivory increases vertical transmission of fungal endophytes that deter herbivores and alter tolerance to herbivory in Poa autumnalis. ANNALS OF BOTANY 2020; 125:981-991. [PMID: 32010946 PMCID: PMC7218812 DOI: 10.1093/aob/mcaa021] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/16/2019] [Accepted: 01/31/2020] [Indexed: 05/02/2023]
Abstract
BACKGROUND AND AIMS The processes that maintain variation in the prevalence of symbioses within host populations are not well understood. While the fitness benefits of symbiosis have clearly been shown to drive changes in symbiont prevalence, the rate of transmission has been less well studied. Many grasses host symbiotic fungi (Epichloë spp.), which can be transmitted vertically to seeds or horizontally via spores. These symbionts may protect plants against herbivores by producing alkaloids or by increasing tolerance to damage. Therefore, herbivory may be a key ecological factor that alters symbiont prevalence within host populations by affecting either symbiont benefits to host fitness or the symbiont transmission rate. Here, we addressed the following questions: Does symbiont presence modulate plant tolerance to herbivory? Does folivory increase symbiont vertical transmission to seeds or hyphal density in seedlings? Do plants with symbiont horizontal transmission have lower rates of vertical transmission than plants lacking horizontal transmission? METHODS We studied the grass Poa autumnalis and its symbiotic fungi in the genus Epichloë. We measured plant fitness (survival, growth, reproduction) and symbiont transmission to seeds following simulated folivory in a 3-year common garden experiment and surveyed natural populations that varied in mode of symbiont transmission. KEY RESULTS Poa autumnalis hosted two Epichloë taxa, an undescribed vertically transmitted Epichloë sp. PauTG-1 and E. typhina subsp. poae with both vertical and horizontal transmission. Simulated folivory reduced plant survival, but endophyte presence increased tolerance to damage and boosted fitness. Folivory increased vertical transmission and hyphal density within seedlings, suggesting induced protection for progeny of damaged plants. Across natural populations, the prevalence of vertical transmission did not correlate with symbiont prevalence or differ with mode of transmission. CONCLUSIONS Herbivory not only mediated the reproductive fitness benefits of symbiosis, but also promoted symbiosis prevalence by increasing vertical transmission of the fungus to the next generation. Our results reveal a new mechanism by which herbivores could influence the prevalence of microbial symbionts in host populations.
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Affiliation(s)
- Pedro E Gundel
- IFEVA-CONICET, Department of Ecology, College of Agronomy, University of Buenos Aires, Buenos Aires, Argentina
- Department of Biology, University of New Mexico, Albuquerque, NM, USA
- For correspondence. E-mail
| | - Prudence Sun
- Department of Biosciences, Rice University, Houston, TX, USA
| | | | | | - Tom E X Miller
- Department of Biosciences, Rice University, Houston, TX, USA
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39
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Abstract
Abstract
Fig tree–fig wasp mutualisms are diverse and underpin much biodiversity. The wasps (Agaonidae) are the sole pollinators of the trees (Ficus). Figs are enclosed inflorescences, each of which contains many small flowers. Female wasps (foundresses) enter receptive figs to spread pollen and to lay their eggs individually into fig flowers. As they oviposit, wasps also inject chemicals that transform individual flower ovaries into galls that will feed and house wasp offspring. For fig tree–fig wasp mutualisms to persist, the trees must set seed; therefore, the wasps have both to pollinate and to fail to gall all flower ovaries. However, wasps that avoid pollination costs and/or gall all flowers are predicted to outcompete more cooperative conspecifics, resulting in destabilisation of the mutualism. Here, I review the literature on why wasps pollinate by focusing on how trees reduce investment to unpollinated figs, resulting in ‘sanctions’ to wasps that fail to pollinate via reduced production of offspring. I also review the mechanisms that prevent wasps from galling all flowers, mainly those in monoecious Ficus, that also result in wasps predominantly galling longer flowers whilst leaving shorter flowers to become seeds. I make suggestions for future work and conclude by reaffirming why multiple processes promote stability in fig tree–fig wasp mutualisms.
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Affiliation(s)
- Derek W Dunn
- College of Life Sciences, Northwest University, Xian, China
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40
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Heath KD, Podowski JC, Heniff S, Klinger CR, Burke PV, Weese DJ, Yang WH, Lau JA. Light availability and rhizobium variation interactively mediate the outcomes of legume-rhizobium symbiosis. AMERICAN JOURNAL OF BOTANY 2020; 107:229-238. [PMID: 32072629 DOI: 10.1002/ajb2.1435] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2019] [Accepted: 12/08/2019] [Indexed: 05/22/2023]
Abstract
PREMISE Nutrients, light, water, and temperature are key factors limiting the growth of individual plants in nature. Mutualistic interactions between plants and microbes often mediate resource limitation for both partners. In the mutualism between legumes and rhizobia, plants provide rhizobia with carbon in exchange for fixed nitrogen. Because partner quality in mutualisms is genotype-dependent, within-species genetic variation is expected to alter the responses of mutualists to changes in the resource environment. Here we ask whether partner quality variation in rhizobia mediates the response of host plants to changing light availability, and conversely, whether light alters the expression of partner quality variation. METHODS We inoculated clover hosts with 11 strains of Rhizobium leguminosarum that differed in partner quality, grew plants under either ambient or low light conditions in the greenhouse, and measured plant growth, nodule traits, and foliar nutrient composition. RESULTS Light availability and rhizobium inoculum interactively determined plant growth, and variation in rhizobium partner quality was more apparent in ambient light. CONCLUSIONS Our results suggest that variation in the costs and benefits of rhizobium symbionts mediate host responses to light availability and that rhizobium strain variation might more important in higher-light environments. Our work adds to a growing appreciation for the role of microbial intraspecific and interspecific diversity in mediating extended phenotypes in their hosts and suggests an important role for light availability in the ecology and evolution of legume-rhizobium symbiosis.
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Affiliation(s)
- Katy D Heath
- Department of Plant Biology, University of Illinois at Urbana-Champaign, 505 S. Goodwin Ave., Urbana, IL, 61801, USA
| | - Justin C Podowski
- Department of Plant Biology, University of Illinois at Urbana-Champaign, 505 S. Goodwin Ave., Urbana, IL, 61801, USA
| | - Stephanie Heniff
- Department of Plant Biology, University of Illinois at Urbana-Champaign, 505 S. Goodwin Ave., Urbana, IL, 61801, USA
| | - Christie R Klinger
- Department of Plant Biology, University of Illinois at Urbana-Champaign, 505 S. Goodwin Ave., Urbana, IL, 61801, USA
| | - Patricia V Burke
- Department of Plant Biology, University of Illinois at Urbana-Champaign, 505 S. Goodwin Ave., Urbana, IL, 61801, USA
| | - Dylan J Weese
- Department of Biology, St. Ambrose University, Davenport, IA, 52803, USA
| | - Wendy H Yang
- Department of Plant Biology, University of Illinois at Urbana-Champaign, 505 S. Goodwin Ave., Urbana, IL, 61801, USA
| | - Jennifer A Lau
- W. K. Kellogg Biological Station and Department of Plant Biology, Michigan State University, East Lansing, MI, 48824, USA
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41
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Gano-Cohen KA, Wendlandt CE, Al Moussawi K, Stokes PJ, Quides KW, Weisberg AJ, Chang JH, Sachs JL. Recurrent mutualism breakdown events in a legume rhizobia metapopulation. Proc Biol Sci 2020; 287:20192549. [PMID: 31992172 DOI: 10.1098/rspb.2019.2549] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/03/2023] Open
Abstract
Bacterial mutualists generate major fitness benefits for eukaryotes, reshaping the host phenotype and its interactions with the environment. Yet, microbial mutualist populations are predicted to generate mutants that defect from providing costly services to hosts while maintaining the capacity to exploit host resources. Here, we examined the mutualist service of symbiotic nitrogen fixation in a metapopulation of root-nodulating Bradyrhizobium spp. that associate with the native legume Acmispon strigosus. We quantified mutualism traits of 85 Bradyrhizobium isolates gathered from a 700 km transect in California spanning 10 sampled A. strigosus populations. We clonally inoculated each Bradyrhizobium isolate onto A. strigosus hosts and quantified nodulation capacity and net effects of infection, including host growth and isotopic nitrogen concentration. Six Bradyrhizobium isolates from five populations were categorized as ineffective because they formed nodules but did not enhance host growth via nitrogen fixation. Six additional isolates from three populations failed to form root nodules. Phylogenetic reconstruction inferred two types of mutualism breakdown, including three to four independent losses of effectiveness and five losses of nodulation capacity on A. strigosus. The evolutionary and genomic drivers of these mutualism breakdown events remain poorly understood.
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Affiliation(s)
- Kelsey A Gano-Cohen
- Department of Microbiology and Plant Pathology, University of California, Riverside, CA, USA
| | - Camille E Wendlandt
- Department of Botany and Plant Sciences, University of California, Riverside, CA, USA
| | - Khadija Al Moussawi
- Department of Evolution Ecology and Organismal Biology, University of California, Riverside, CA, USA
| | - Peter J Stokes
- Department of Botany and Plant Sciences, University of California, Riverside, CA, USA
| | - Kenjiro W Quides
- Department of Evolution Ecology and Organismal Biology, University of California, Riverside, CA, USA
| | - Alexandra J Weisberg
- Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, USA
| | - Jeff H Chang
- Department of Botany and Plant Pathology, Oregon State University, Corvallis, OR, USA
| | - Joel L Sachs
- Department of Microbiology and Plant Pathology, University of California, Riverside, CA, USA.,Department of Botany and Plant Sciences, University of California, Riverside, CA, USA.,Department of Evolution Ecology and Organismal Biology, University of California, Riverside, CA, USA.,Institute for Integrative Genome Biology, University of California, Riverside, CA, USA
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42
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Frederickson ME. No selection for cheating in a natural meta‐population of rhizobia. Ecol Lett 2020; 23:409-411. [DOI: 10.1111/ele.13293] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2019] [Accepted: 05/11/2019] [Indexed: 01/24/2023]
Affiliation(s)
- Megan E. Frederickson
- Department of Ecology and Evolutionary Biology University of Toronto Toronto ONM5S 3B2Canada
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43
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Michaud C, Hervé V, Dupont S, Dubreuil G, Bézier AM, Meunier J, Brune A, Dedeine F. Efficient but occasionally imperfect vertical transmission of gut mutualistic protists in a wood‐feeding termite. Mol Ecol 2019; 29:308-324. [DOI: 10.1111/mec.15322] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/11/2019] [Revised: 11/26/2019] [Accepted: 11/27/2019] [Indexed: 10/25/2022]
Affiliation(s)
- Caroline Michaud
- Institut de Recherche sur la Biologie de l'Insecte UMR 7261 CNRS – Université de Tours Tours France
| | - Vincent Hervé
- Research Group Insect Gut Microbiology and Symbiosis Max Planck Institute for Terrestrial Microbiology Marburg Germany
| | - Simon Dupont
- Institut de Recherche sur la Biologie de l'Insecte UMR 7261 CNRS – Université de Tours Tours France
| | - Géraldine Dubreuil
- Institut de Recherche sur la Biologie de l'Insecte UMR 7261 CNRS – Université de Tours Tours France
| | - Annie M. Bézier
- Institut de Recherche sur la Biologie de l'Insecte UMR 7261 CNRS – Université de Tours Tours France
| | - Joël Meunier
- Institut de Recherche sur la Biologie de l'Insecte UMR 7261 CNRS – Université de Tours Tours France
| | - Andreas Brune
- Research Group Insect Gut Microbiology and Symbiosis Max Planck Institute for Terrestrial Microbiology Marburg Germany
| | - Franck Dedeine
- Institut de Recherche sur la Biologie de l'Insecte UMR 7261 CNRS – Université de Tours Tours France
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44
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Enforcement is central to the evolution of cooperation. Nat Ecol Evol 2019; 3:1018-1029. [PMID: 31239554 DOI: 10.1038/s41559-019-0907-1] [Citation(s) in RCA: 40] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2018] [Accepted: 04/26/2019] [Indexed: 01/21/2023]
Abstract
Cooperation occurs at all levels of life, from genomes, complex cells and multicellular organisms to societies and mutualisms between species. A major question for evolutionary biology is what these diverse systems have in common. Here, we review the full breadth of cooperative systems and find that they frequently rely on enforcement mechanisms that suppress selfish behaviour. We discuss many examples, including the suppression of transposable elements, uniparental inheritance of mitochondria and plastids, anti-cancer mechanisms, reciprocation and punishment in humans and other vertebrates, policing in eusocial insects and partner choice in mutualisms between species. To address a lack of accompanying theory, we develop a series of evolutionary models that show that the enforcement of cooperation is widely predicted. We argue that enforcement is an underappreciated, and often critical, ingredient for cooperation across all scales of biological organization.
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45
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Nectar robbing in bellflower (Sesamum radiatum) benefited pollinators but unaffected maternal function of plant reproduction. Sci Rep 2019; 9:8357. [PMID: 31175314 PMCID: PMC6555787 DOI: 10.1038/s41598-019-44741-y] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/02/2018] [Accepted: 04/15/2019] [Indexed: 11/30/2022] Open
Abstract
Nectar robbing – foraging nectar illegitimately – has negative, neutral, or positive effects on maternal function of plant reproduction and/or on pollinators. It has been suggested that nectar robbing has a non-negative effect on maternal function of plant reproduction in autogamous and mixed breeding plants; however this hypothesis requires deeper understanding with more studies. We investigated the impact of natural nectar robbing on maternal function of plant reproduction and visitation characteristics of pollinators in Sesamum radiatum, an autogamous plant. Pollinators were observed on unrobbed open flowers and robbed open flowers. In robbed flowers, pollinators’ visit type and foraging time were examined. The seed sets of these flower types were examined. Xylocopa latipes was both a primary robber and a legitimate pollinator, X. bryorum was an exclusive primary robber, and Megachile disjuncta was a cosmopolitan pollinator. In robbed flowers, most of the pollinators foraged mostly as secondary nectar robbers. The foraging time shortened considerably when pollinators robbed nectar – a positive effect on pollinators’ foraging efficiency. Robbing did not negatively affect seed set – a neutral effect on the plant’s reproduction. Our study agrees that nectar robbing might have a non-negative effect on reproduction in autogamous and mixed breeding plants.
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46
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Hart SFM, Pineda JMB, Chen CC, Green R, Shou W. Disentangling strictly self-serving mutations from win-win mutations in a mutualistic microbial community. eLife 2019; 8:e44812. [PMID: 31162049 PMCID: PMC6548503 DOI: 10.7554/elife.44812] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2018] [Accepted: 03/19/2019] [Indexed: 12/31/2022] Open
Abstract
Mutualisms can be promoted by pleiotropic win-win mutations which directly benefit self (self-serving) and partner (partner-serving). Intuitively, partner-serving phenotype could be quantified as an individual's benefit supply rate to partners. Here, we demonstrate the inadequacy of this thinking, and propose an alternative. Specifically, we evolved well-mixed mutualistic communities where two engineered yeast strains exchanged essential metabolites lysine and hypoxanthine. Among cells that consumed lysine and released hypoxanthine, a chromosome duplication mutation seemed win-win: it improved cell's affinity for lysine (self-serving), and increased hypoxanthine release rate per cell (partner-serving). However, increased release rate was due to increased cell size accompanied by increased lysine utilization per birth. Consequently, total hypoxanthine release rate per lysine utilization (defined as 'exchange ratio') remained unchanged. Indeed, this mutation did not increase the steady state growth rate of partner, and is thus solely self-serving during long-term growth. By extension, reduced benefit production rate by an individual may not imply cheating.
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Affiliation(s)
| | | | - Chi-Chun Chen
- Division of Basic SciencesFred Hutchinson Cancer Research CenterSeattleUnited States
| | - Robin Green
- Division of Basic SciencesFred Hutchinson Cancer Research CenterSeattleUnited States
| | - Wenying Shou
- Division of Basic SciencesFred Hutchinson Cancer Research CenterSeattleUnited States
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47
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48
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Clark TJ, Friel CA, Grman E, Friesen ML, Shachar-Hill Y. Unfair trade underground revealed by integrating data with Nash bargaining models. THE NEW PHYTOLOGIST 2019; 222:1325-1337. [PMID: 30671951 DOI: 10.1111/nph.15703] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/18/2018] [Accepted: 01/08/2019] [Indexed: 06/09/2023]
Abstract
Mutually beneficial resource exchange is fundamental to global biogeochemical cycles and plant and animal nutrition. However, there is inherent potential conflict in mutualisms, as each organism benefits more when the exchange ratio ('price') minimizes its own costs and maximizes its benefits. Understanding the bargaining power that each partner has in these interactions is key to our ability to predict the exchange ratio and therefore the functionality of the cell, organism, community and ecosystem. We tested whether partners have symmetrical ('fair') or asymmetrical ('unfair') bargaining power in a legume-rhizobia nitrogen-fixing symbiosis using measurements of carbon and nitrogen dynamics in a mathematical modeling framework derived from economic theory. A model of symmetric bargaining power was not consistent with our data. Instead, our data indicate that the growth benefit to the plant (Medicago truncatula) has greater weight in determining trade dynamics than the benefit to the bacteria. Quantitative estimates of the relative power of the plant revealed that the plant's influence rises as soil nitrogen availability decreases and trade benefits to both partners increase. Our finding that M. truncatula legumes have more bargaining power than their rhizobial partner at lower nitrogen availabilities highlights the importance of context-dependence for the evolution of mutualism with increasing nutrient deposition.
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Affiliation(s)
- Teresa J Clark
- Department of Plant Biology, Michigan State University, 612 Wilson Rd., East Lansing, MI, 48824, USA
| | - Colleen A Friel
- Department of Plant Biology, Michigan State University, 612 Wilson Rd., East Lansing, MI, 48824, USA
| | - Emily Grman
- Department of Biology, Eastern Michigan University, 441 Mark Jefferson Science Complex, Ypsilanti, MI, 48197, USA
| | - Maren L Friesen
- Department of Plant Biology, Michigan State University, 612 Wilson Rd., East Lansing, MI, 48824, USA
- Department of Plant Pathology, Washington State University, Johnson Hall Rm 345, Pullman, WA, 99164, USA
- Department of Crop and Soil Sciences, Washington State University, Johnson Hall Rm 115, Pullman, WA, 99164, USA
| | - Yair Shachar-Hill
- Department of Plant Biology, Michigan State University, 612 Wilson Rd., East Lansing, MI, 48824, USA
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49
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Gano‐Cohen KA, Wendlandt CE, Stokes PJ, Blanton MA, Quides KW, Zomorrodian A, Adinata ES, Sachs JL. Interspecific conflict and the evolution of ineffective rhizobia. Ecol Lett 2019; 22:914-924. [DOI: 10.1111/ele.13247] [Citation(s) in RCA: 22] [Impact Index Per Article: 4.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/15/2019] [Accepted: 02/07/2019] [Indexed: 12/25/2022]
Affiliation(s)
- Kelsey A. Gano‐Cohen
- Department of Microbiology and Plant Pathology University of California Riverside CA USA
- Department of Evolution Ecology & Organismal Biology University of California Riverside CA USA
| | - Camille E. Wendlandt
- Department of Evolution Ecology & Organismal Biology University of California Riverside CA USA
- Department of Botany and Plant Sciences University of California Riverside CA USA
| | - Peter J. Stokes
- Department of Evolution Ecology & Organismal Biology University of California Riverside CA USA
| | - Mia A. Blanton
- Department of Evolution Ecology & Organismal Biology University of California Riverside CA USA
| | - Kenjiro W. Quides
- Department of Evolution Ecology & Organismal Biology University of California Riverside CA USA
| | - Avissa Zomorrodian
- Department of Evolution Ecology & Organismal Biology University of California Riverside CA USA
| | - Eunice S. Adinata
- Department of Evolution Ecology & Organismal Biology University of California Riverside CA USA
| | - Joel L. Sachs
- Department of Microbiology and Plant Pathology University of California Riverside CA USA
- Department of Evolution Ecology & Organismal Biology University of California Riverside CA USA
- Department of Botany and Plant Sciences University of California Riverside CA USA
- Institute for Integrative Genome Biology University of California Riverside CA USA
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50
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Abstract
Mutualisms occur when at least two species provide a net fitness benefit to each other. These types of interactions are ubiquitous in nature, with more being discovered regularly. Mutualisms are vital to humankind: Pollinators and soil microbes are critical in agriculture, bacterial microbiomes regulate our health, and domesticated animals provide us with food and companionship. Many hypotheses exist on how mutualisms evolve; however, they are difficult to evaluate without bias, due to the fragile and idiosyncratic systems most often investigated. Instead, we have created an artificial life simulation, Symbulation, which we use to examine mutualism evolution based on (1) the probability of vertical transmission (symbiont being passed to offspring) and (2) the spatial structure of the environment. We found that spatial structure can lead to less mutualism at intermediate vertical transmission rates. We provide evidence that this effect is due to the ability of quasi species to purge parasites, reducing the diversity of available symbionts. Our simulation is easily extended to test many additional hypotheses about the evolution of mutualism and serves as a general model to quantitatively compare how different environments affect the evolution of mutualism.
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