Structural Classification of Wild Boar (Sus scrofa) Vocalizations

Vocal repertoire and individuality in the plains zebra (Equus quagga)

Acoustic signals are vital in animal communication, and quantifying them is fundamental for understanding animal behaviour and ecology. Vocalizations can be classified into acoustically and functionally or contextually distinct categories, but establishing these categories can be challenging. Newly developed methods, such as machine learning, can provide solutions for classification tasks. The plains zebra is known for its loud and specific vocalizations, yet limited knowledge exists on the structure and information content of its vocalzations. In this study, we employed both feature-based and spectrogram-based algorithms, incorporating supervised and unsupervised machine learning methods to enhance robustness in categorizing zebra vocalization types. Additionally, we implemented a permuted discriminant function analysis to examine the individual identity information contained in the identified vocalization types. The findings revealed at least four distinct vocalization types-the 'snort', the 'soft snort', the 'squeal' and the 'quagga quagga'-with individual differences observed mostly in snorts, and to a lesser extent in squeals. Analyses based on acoustic features outperformed those based on spectrograms, but each excelled in characterizing different vocalization types. We thus recommend the combined use of these two approaches. This study offers valuable insights into plains zebra vocalization, with implications for future comprehensive explorations in animal communication.

Social calls of the little auk (Alle alle) reflect body size and possibly partnership, but not sex

Source-filter theory posits that an individual's size and vocal tract length are reflected in the parameters of their calls. In species that mate assortatively, this could result in vocal similarity. In the context of mate selection, this would mean that animals could listen in to find a partner that sounds-and therefore is-similar to them. We investigated the social calls of the little auk (Alle alle), a highly vocal seabird mating assortatively, using vocalizations produced inside 15 nests by known individuals. Source- and filter-related acoustic parameters were used in linear mixed models testing the possible impact of body size. A principal component analysis followed by a permuted discriminant function analysis tested the effect of sex. Additionally, randomization procedures tested whether partners are more vocally similar than random birds. There was a significant effect of size on the mean fundamental frequency of a simple call, but not on parameters of a multisyllable call with apparent formants. Neither sex nor partnership influenced the calls-there was, however, a tendency to match certain parameters between partners. This indicates that vocal cues are at best weak indicators of size, and other factors likely play a role in mate selection.

How do you do the things that you do? Ethological approach to the description of robot behaviour

The detailed description of behaviour of the interacting parties is becoming more and more important in human-robot interaction (HRI), especially in social robotics (SR). With the rise in the number of publications, there is a substantial need for the objective and comprehensive description of implemented robot behaviours to ensure comparability and reproducibility of the studies. Ethograms and the meticulous analysis of behaviour was introduced long ago in animal behaviour research (cf. ethology). The adoption of this method in SR and HRI can ensure the desired clarity over robot behaviours, while also providing added benefits during robot development, behaviour modelling and analysis of HRI experiments. We provide an overview of the possible uses and advantages of ethograms in HRI, and propose a general framework for describing behaviour which can be adapted to the requirements of specific studies.

Seabird's cry: repertoire and vocal expression of contextual valence in the little auk (Alle alle)

Many seabird species breed in colonies counting up to hundreds of thousands of individuals. Life in such crowded colonies might require special coding-decoding systems to reliably convey information through acoustic cues. This can include, for example, developing complex vocal repertoires and adjusting the properties of their vocal signals to communicate behavioural contexts, and thus regulate social interactions with their conspecifics. We studied vocalisations produced by the little auk (Alle alle)-a highly vocal, colonial seabird-over mating and incubation periods on the SW coast of Svalbard. Using passive acoustic recordings registered in a breeding colony, we extracted eight vocalisation types: single call, clucking, classic call, low trill, short call, short-trill, terror, and handling vocalisation. Calls were grouped by production context (based on the typically associated behaviour), to which a valence (positive vs negative) was later attributed, when possible, according to fitness threats, i.e. predator or human presence (negative) and promoters, i.e. interaction with a partner (positive). The effect of the putative valence on eight selected frequency and duration variables was then investigated. The putative contextual valence significantly affected the acoustic properties of the calls. Calls assigned positive valence had higher fundamental frequency and spectral centre of gravity as well as shorter sound duration than these assigned negative valence. These results indicate that the little auk's vocal communication system may facilitate expression of complex behavioural contexts, and seems to include vocal plasticity within vocalisation types-however, more data are necessary to better understand this effect and possible interplays of other factors.

Tissue-engineered vocal fold replacement in swine: Methods for functional and structural analysis

We have developed a cell-based outer vocal fold replacement (COVR) as a potential therapy to improve voice quality after vocal fold (VF) injury, radiation, or tumor resection. The COVR consists of multipotent human adipose-derived stem cells (hASC) embedded within a three-dimensional fibrin scaffold that resembles vocal fold epithelium and lamina propria layers. Previous work has shown improved wound healing in rabbit studies. In this pilot study in pigs, we sought to develop methods for large animal implantation and phonatory assessment. Feasibility, safety, and structural and functional outcomes of the COVR implant are described. Of eight pigs studied, six animals underwent COVR implantation with harvest between 2 weeks and 6 months. Recovery of laryngeal tissue structure was assessed by vibratory and histologic analyses. Recovery of voice function was assessed by investigating acoustic parameters that were derived specifically for pigs. Results showed improved lamina propria qualities relative to an injured control animal at 6 months. Acoustic parameters reflected voice worsening immediately after surgery as expected; acoustics displayed clear voice recovery in the animal followed for 6 months after COVR. These methods form the basis for a larger-scale long-term pre-clinical safety and efficacy study.

Classification of pig calls produced from birth to slaughter according to their emotional valence and context of production

Vocal expression of emotions has been observed across species and could provide a non-invasive and reliable means to assess animal emotions. We investigated if pig vocal indicators of emotions revealed in previous studies are valid across call types and contexts, and could potentially be used to develop an automated emotion monitoring tool. We performed an analysis of an extensive and unique dataset of low (LF) and high frequency (HF) calls emitted by pigs across numerous commercial contexts from birth to slaughter (7414 calls from 411 pigs). Our results revealed that the valence attributed to the contexts of production (positive versus negative) affected all investigated parameters in both LF and HF. Similarly, the context category affected all parameters. We then tested two different automated methods for call classification; a neural network revealed much higher classification accuracy compared to a permuted discriminant function analysis (pDFA), both for the valence (neural network: 91.5%; pDFA analysis weighted average across LF and HF (cross-classified): 61.7% with a chance level at 50.5%) and context (neural network: 81.5%; pDFA analysis weighted average across LF and HF (cross-classified): 19.4% with a chance level at 14.3%). These results suggest that an automated recognition system can be developed to monitor pig welfare on-farm.

Chronic recording of cortical activity underlying vocalization in awake minipigs

BACKGROUND

Investigating brain dynamics underlying vocal production in animals is a powerful way to inform on the neural bases of human speech. In particular, brain networks underlying vocal production in non-human primates show striking similarities with the human speech production network. However, despite increasing findings also in birds and more recently in rodents, the extent to which the primate vocal cortical network model generalizes to other non-primate mammals remains unclear. Especially, no domestic species has yet been proposed to investigate vocal brain activity using electrophysiological approaches.

NEW METHOD

In the present study, we introduce a novel experimental paradigm to identify the cortical dynamics underlying vocal production in behaving minipigs. A key problem to chronically implant cortical probes in pigs is the presence and growth of frontal sinuses extending caudally to the parietal bone and preventing safe access to neural structures with conventional craniotomy in adult animals.

RESULTS

Here we first show that implantations of soft ECoG grids can be done safely using conventional craniotomy in minipigs younger than 5 months, a period when sinuses are not yet well developed. Using wireless recordings in behaving animals, we further show activation of the motor and premotor cortex around the onset of vocal production of grunts, the most common vocalization of pigs.

CONCLUSION

These results suggest that minipigs, which are very loquacious and social animals, can be a good experimental large animal model to study the cortical bases of vocal production.

Observation of rescue behaviour in wild boar (Sus scrofa)

Here, we provide unique photo documentation and observational evidence of rescue behaviour described for the first time in wild boar. Rescue behaviour represents an extreme form of prosocial behaviour that has so far only been demonstrated in a few species. It refers to a situation when one individual acts to help another individual that finds itself in a dangerous or stressful situation and it is considered by some authors as a complex form of empathy. We documented a case in which an adult female wild boar manipulated wooden logs securing the door mechanism of a cage trap and released two entrapped young wild boars. The whole rescue was fast and particular behaviours were complex and precisely targeted, suggesting profound prosocial tendencies and exceptional problem-solving capacities in wild boar. The rescue behaviour might have been motivated by empathy because the rescuer female exhibited piloerection, a sign of distress, indicating an empathetic emotional state matching or understanding the victims. We discuss this rescue behaviour in the light of possible underlying motivators, including empathy, learning and social facilitation.

Objective Assessment of Porcine Voice Acoustics for Laryngeal Surgical Modeling

Pigs have become important animal models in voice research. Several objective parameters exist to characterize the pig voice, but it is not clear which of them are sensitive to the impaired voice quality after laryngeal injury or surgery. In order to conduct meaningful voice research in pigs, it is critical to have standard functional voice outcome measures that can distinguish between normal and impaired voices. For this reason, we investigated 17 acoustic parameters before and early after surgery in three Yucatan mini pigs. Four parameters showed consistent changes between pre- and post-surgery recordings, mostly related to decreased spectral energy in higher frequencies after surgery. We recommend two of these, 50% spectral energy quartile (Q50) and Flux, for objective functional voice assessment of pigs undergoing laryngeal surgery. The long-term goal of this process is to enable quantitative voice outcome tracking of laryngeal surgical interventions in porcine models.

Effect of Ventricular Folds on Vocalization Fundamental Frequency in Domestic Pigs (Sus scrofa domesticus)

This study investigates the effect of the ventricular folds on fundamental frequency (f_o) in the voice production of domestic pigs (Sus scrofa domesticus). The excised larynges of six subadult pigs were phonated in two preparation stages, with the ventricular folds present (PS1) and removed (PS2). Vocal fold resonances were tested with a laser vibrometer, and a four-mass computational model was created. Highly significant f_o differences were found between PS1 and PS2 (means at 93.7 and 409.3 Hz, respectively). Two tissue resonances were found at 115 Hz and 250-290 Hz. The computational model had unique solutions for abducted and adducted ventricular folds at about 150 and 400 Hz, roughly matching the f_o measured ex vivo for PS1 and PS2. The differing f_o encountered across preparation stages PS1 and PS2 is explained by distinct activation of either a high or a low eigenfrequency mode, depending on the engagement of the ventricular folds. The inability of the investigated larynges to vibrate at frequencies below 250 Hz in PS2 suggests that in vivo low-frequency calls of domestic pigs (pre-eminently grunts) are likely produced with engaged ventricular folds. Allometric comparison suggests that the special, mechanically coupled "double oscillator" has evolved to prevent signaling disadvantages. Given these traits, the porcine larynx might - apart from special applications relating to the involvement of ventricular folds - not be an ideal candidate for emulating human voice production in excised larynx experimentation.

Classification of Florida manatee (Trichechus manatus latirostris) vocalizations

The vocal repertoire for the Florida manatee is quantitatively categorized from a sample of 1114 calls recorded from 3 different manatee habitats in Florida. First, manatee vocalizations were categorized into five call categories based on visual inspection of spectrograms and following descriptions provided in previous studies. Second, based on measurements of 17 acoustic parameters, the subjective classification scheme was validated using classification and regression trees (CARTs) and model-based cluster analysis paired with silhouette coefficients. CART analysis revealed that these five broad call categories can be successfully distinguished based on correct classification scores of 41.6%-62.5%. Silhouette coefficients determined that the manatee vocal repertoire is highly intergraded. This study supports and expands upon existing subjective categorization schemes by providing a quantifiable methodology for describing the Florida manatees' vocal repertoire. These findings contribute to the increasing number of studies suggesting many animal species vocal repertoires contain graded call types.

Automated bioacoustics: methods in ecology and conservation and their potential for animal welfare monitoring

Vocalizations carry emotional, physiological and individual information. This suggests that they may serve as potentially useful indicators for inferring animal welfare. At the same time, automated methods for analysing and classifying sound have developed rapidly, particularly in the fields of ecology, conservation and sound scene classification. These methods are already used to automatically classify animal vocalizations, for example, in identifying animal species and estimating numbers of individuals. Despite this potential, they have not yet found widespread application in animal welfare monitoring. In this review, we first discuss current trends in sound analysis for ecology, conservation and sound classification. Following this, we detail the vocalizations produced by three of the most important farm livestock species: chickens ( Gallus gallus domesticus), pigs ( Sus scrofa domesticus) and cattle ( Bos taurus). Finally, we describe how these methods can be applied to monitor animal welfare with new potential for developing automated methods for large-scale farming.

Encoding of Emotional Valence in Wild Boar (Sus scrofa) Calls

Simple Summary

Animal welfare today is assessed based on both the physical and mental health of animals. However, measuring animal mental health, which includes emotions (i.e., short-term positive or negative reactions to specific events), remains a challenge. Since animals are known to use vocalizations to communicate their emotions to their peers, knowledge about how the structure of vocalizations changes with emotions could be very useful in order to develop noninvasive indicators for assessing animal welfare under captive conditions. The aim of this study was thus to investigate if the type of calls (i.e., grunt, scream, or squeal) or the acoustic structure of the calls emitted by captive wild boars changed according to the emotions they were experiencing. We found that wild boars used different types of calls in positive and negative situations. We also found that their acoustic structure changed according to the emotions. Indeed, calls produced in positive situations were generally shorter and at lower frequencies than those produced in negative situations. It thus seems that wild boars express their emotional state through their vocalizations. Overall, our study gives us better knowledge about how the emotions of captive wild boars could be assessed, and how this compares to domestic pigs.

Abstract

Measuring emotions in nonhuman mammals is challenging. As animals are not able to verbally report how they feel, we need to find reliable indicators to assess their emotional state. Emotions can be described using two key dimensions: valence (negative or positive) and arousal (bodily activation or excitation). In this study, we investigated vocal expression of emotional valence in wild boars (Sus scrofa). The animals were observed in three naturally occurring situations: anticipation of a food reward (positive), affiliative interactions (positive), and agonistic interactions (negative). Body movement was used as an indicator of emotional arousal to control for the effect of this dimension. We found that screams and squeals were mostly produced during negative situations, and grunts during positive situations. Additionally, the energy quartiles, duration, formants, and harmonicity indicated valence across call types and situations. The mean of the first and second formants also indicated valence, but varied according to the call type. Our results suggest that wild boars can vocally express their emotional states. Some of these indicators could allow us to identify the emotional valence that wild boars are experiencing during vocal production and thus inform us about their welfare.

Individual stability in vocalization rates of preweaning piglets

Piglet vocalization rates are used as welfare indicators. The emission rates of the two gross categories of piglet calls, namely low frequency calls ("grunts") and high frequency calls ("screams"), may contain different information about the piglet's internal state due to differing communicative functions of the two call types. More knowledge is needed about the sources of variation in calling rates within and between piglets. We examined to what extent the emission rates of the two call types are codetermined by individual and litter identity, i.e., whether the rates are repeatable within individuals and similar between littermates. We recorded frequency of grunts and screams in one mildly negative (short-term Isolation) and one moderately negative (manual Restraint) situation during the first week (week 1) and the 4th week (week 4) of life and asked the following questions: 1) Are within-individual vocalization rates stable across the suckling period? 2) Are within-individual vocalization rates stable across the two situations? 3) Is there within-litter similarity in vocalization rates? 4) Does this within-litter similarity increase during the suckling period? Within-individual vocalization rates were stable between week 1 and week 4 (grunts in Restraint P < 0.05; grunts in Isolation P < 0.001; screams in Restraint P < 0.001; screams in Isolation P < 0.001). Across the two situations at the same age, the vocalization rates were not stable for grunts but were stable for screams at week 1 and week 4 (P < 0.05). Vocalization rates were more similar between littermates than between piglets belonging to different litters (grunts in Restraint P < 0.001; grunts in Isolation P < 0.01; screams in Restraint P < 0.001; screams in Isolation P < 0.001). This litter effect did not grow stronger from week 1 to week 4 as the within-litter coefficient of variance did not decrease between the two ages. Sex of the piglet had no influence on vocalization rates while greater body weight was associated with lower screaming rates in the Restraint situation (P < 0.05). In conclusion, our study demonstrates that both individuality of the piglet and litter identity affect the vocalization rates of piglets in negatively valenced situations. For screams, the repeatability of individual vocalization rates holds even across situations, while for grunts, the rates are repeatable during ontogeny within the situations, but not across situations.

Ontogeny of individual and litter identity signaling in grunts of piglets

Many studies have shown that animal vocalizations can signal individual identity and group/family membership. However, much less is known about the ontogeny of identity information-when and how this individual/group distinctiveness in vocalizations arises and how it changes during the animal's life. Recent findings suggest that even species that were thought to have limited vocal plasticity could adjust their calls to sound more similar to each other within a group. It has already been shown that sows can acoustically distinguish their own offspring from alien piglets and that litters differ in their calls. Surprisingly, individual identity in piglet calls has not been reported yet. In this paper, this gap is filled, and it is shown that there is information about piglet identity. Information about litter identity is confirmed as well. Individual identity increased with age, but litter vocal identity did not increase with age. The results were robust as a similar pattern was apparent in two situations differing in arousal: isolation and back-test. This paper argues that, in piglets, increased individual discrimination results from the rapid growth of piglets, which is likely to be associated with growth and diversification of the vocal tract rather than from social effects and vocal plasticity.

The acoustic repertoire and behavioural context of the vocalisations of a nocturnal dasyurid, the eastern quoll (Dasyurus viverrinus)

Defining an acoustic repertoire is essential to understanding vocal signalling and communicative interactions within a species. Currently, quantitative and statistical definition is lacking for the vocalisations of many dasyurids, an important group of small to medium-sized marsupials from Australasia that includes the eastern quoll (Dasyurus viverrinus), a species of conservation concern. Beyond generating a better understanding of this species' social interactions, determining an acoustic repertoire will further improve detection rates and inference of vocalisations gathered by automated bioacoustic recorders. Hence, this study investigated eastern quoll vocalisations using objective signal processing techniques to quantitatively analyse spectrograms recorded from 15 different individuals. Recordings were collected in conjunction with observations of the behaviours associated with each vocalisation to develop an acoustic-based behavioural repertoire for the species. Analysis of recordings produced a putative classification of five vocalisation types: Bark, Growl, Hiss, Cp-cp, and Chuck. These were most frequently observed during agonistic encounters between conspecifics, most likely as a graded sequence from Hisses occurring in a warning context through to Growls and finally Barks being given prior to, or during, physical confrontations between individuals. Quantitative and statistical methods were used to objectively establish the accuracy of these five putative call types. A multinomial logistic regression indicated a 97.27% correlation with the perceptual classification, demonstrating support for the five different vocalisation types. This putative classification was further supported by hierarchical cluster analysis and silhouette information that determined the optimal number of clusters to be five. Minor disparity between the objective and perceptual classifications was potentially the result of gradation between vocalisations, or subtle differences present within vocalisations not discernible to the human ear. The implication of these different vocalisations and their given context is discussed in relation to the ecology of the species and the potential application of passive acoustic monitoring techniques.

Body size and vocalization in primates and carnivores

A fundamental assumption in bioacoustics is that large animals tend to produce vocalizations with lower frequencies than small animals. This inverse relationship between body size and vocalization frequencies is widely considered to be foundational in animal communication, with prominent theories arguing that it played a critical role in the evolution of vocal communication, in both production and perception. A major shortcoming of these theories is that they lack a solid empirical foundation: rigorous comparisons between body size and vocalization frequencies remain scarce, particularly among mammals. We address this issue here in a study of body size and vocalization frequencies conducted across 91 mammalian species, covering most of the size range in the orders Primates (n = 50; ~0.11-120 Kg) and Carnivora (n = 41; ~0.14-250 Kg). We employed a novel procedure designed to capture spectral variability and standardize frequency measurement of vocalization data across species. The results unequivocally demonstrate strong inverse relationships between body size and vocalization frequencies in primates and carnivores, filling a long-standing gap in mammalian bioacoustics and providing an empirical foundation for theories on the adaptive function of call frequency in animal communication.

Acoustic Structure and Contextual Use of Calls by Captive Male and Female Cheetahs (Acinonyx jubatus)

The vocal repertoire of captive cheetahs (Acinonyx jubatus) and the specific role of meow vocalizations in communication of this species attract research interest about two dozen years. Here, we expand this research focus for the contextual use of call types, sex differences and individual differences at short and long terms. During 457 trials of acoustic recordings, we collected calls (n = 8120) and data on their contextual use for 13 adult cheetahs (6 males and 7 females) in four Russian zoos. The cheetah vocal repertoire comprised 7 call types produced in 8 behavioural contexts. Context-specific call types (chirr, growl, howl and hiss) were related to courting behaviour (chirr) or to aggressive behaviour (growl, howl and hiss). Other call types (chirp, purr and meow) were not context-specific. The values of acoustic variables differed between call types. The meow was the most often call type. Discriminant function analysis revealed a high potential of meows to encode individual identity and sex at short terms, however, the vocal individuality was unstable over years. We discuss the contextual use and acoustic variables of call types, the ratios of individual and sex differences in calls and the pathways of vocal ontogeny in the cheetah with relevant data on vocalization of other animals.

Honest signaling in domestic piglets (Sus scrofa domesticus): vocal allometry and the information content of grunt calls

The information conveyed in acoustic signals is a central topic in mammal vocal communication research. Body size is one form of information that can be encoded in calls. Acoustic allometry aims to identify the specific acoustic correlates of body size within the vocalizations of a given species, and formants are often a useful acoustic cue in this context. We conducted a longitudinal investigation of acoustic allometry in domestic piglets (Sus scrofa domesticus), asking whether formants of grunt vocalizations provide information concerning the caller's body size over time. On four occasions, we recorded grunts from 20 kunekune piglets, measured their vocal tract length by means of radiographs (X-rays) and weighed them. Controlling for effects of age and sex, we found that body weight strongly predicts vocal tract length, which in turn determines formant frequencies. We conclude that grunt formant frequencies could allow domestic pigs to assess a signaler's body size as it grows. Further research using playback experiments is needed to determine the perceptual role of formants in domestic pig communication.