Colder environments did not select for a faster metabolism during experimental evolution of Drosophila melanogaster

Temperature and nutrition do not interact to shape the evolution of metabolic rate

Metabolic cold adaptation, or Krogh's rule, is the controversial hypothesis that predicts a monotonically negative relationship between metabolic rate and environmental temperature for ectotherms living along thermal clines measured at a common temperature. Macrophysiological patterns consistent with Krogh's rule are not always evident in nature, and experimentally evolved responses to temperature have failed to replicate such patterns. Hence, temperature may not be the sole driver of observed variation in metabolic rate. We tested the hypothesis that temperature, as a driver of energy demand, interacts with nutrition, a driver of energy supply, to shape the evolution of metabolic rate to produce a pattern resembling Krogh's rule. To do this, we evolved replicate lines of Drosophila melanogaster at 18, 25 or 28°C on control, low-calorie or low-protein diets. Contrary to our prediction, we observed no effect of nutrition, alone or interacting with temperature, on adult female and male metabolic rates. Moreover, support for Krogh's rule was only in females at lower temperatures. We, therefore, hypothesize that observed variation in metabolic rate along environmental clines arises from the metabolic consequences of environment-specific life-history optimization, rather than because of the direct effect of temperature on metabolic rate. This article is part of the theme issue 'The evolutionary significance of variation in metabolic rates'.

Testis Size Variation and Its Environmental Correlates in Andrew's Toad (Bufo andrewsi)

Reproductive investments influenced by environmental conditions vary extensively among geographically distinct populations. However, investigations of patterns of intraspecific variation in male reproductive investments and the mechanisms shaping this variation in anurans remain scarce. Here, we focused on the variation in testis size in 14 populations of the Andrew's toad Bufo andrewsi, a species with weak dispersal ability but wide distribution in southwestern China, to establish whether male reproductive investment varies on an environmental gradient. Our analysis revealed a significant variation in relative testis size across populations, and a positive correlation between testis size and body condition. We, however, found no geographic trends explaining the variability in the testis size. The relative testis size did not increase with increasing latitude or altitude. We also found no relationship between relative testis size and rainfall, but a negative correlation with the coefficient of variation of temperature, with larger testes under stable environments. These findings suggest that the decreased male reproductive investment of this species may be a consequence of harsher or fluctuating environmental conditions.

Variation in fine-scale recombination rate in temperature-evolved Drosophila melanogaster populations in response to selection

Meiotic recombination plays a critical evolutionary role in maintaining fitness in response to selective pressures due to changing environments. Variation in recombination rate has been observed amongst and between species and populations and within genomes across numerous taxa. Studies have demonstrated a link between changes in recombination rate and selection, but the extent to which fine-scale recombination rate varies between evolved populations during the evolutionary period in response to selection is under active research. Here, we utilize a set of 3 temperature-evolved Drosophila melanogaster populations that were shown to have diverged in several phenotypes, including recombination rate, based on the temperature regime in which they evolved. Using whole-genome sequencing data from these populations, we generated linkage disequilibrium-based fine-scale recombination maps for each population. With these maps, we compare recombination rates and patterns among the 3 populations and show that they have diverged at fine scales but are conserved at broader scales. We further demonstrate a correlation between recombination rates and genomic variation in the 3 populations. Lastly, we show variation in localized regions of enhanced recombination rates, termed warm spots, between the populations with these warm spots and associated genes overlapping areas previously shown to have diverged in the 3 populations due to selection. These data support the existence of recombination modifiers in these populations which are subject to selection during evolutionary change.

Thermal boldness: Volunteer exploration of extreme temperatures in fruit flies

A dominant perception is that small and motile ectothermic animals must use behavior to avoid exposure to critical or sub-critical temperatures impairing physiological performance. Concomitantly, volunteer exploration of extreme environments by some individuals may promote physiological adjustments and enhance ecological opportunity. Here we introduce to the literature a Thermal Decision System (TDS) which is fully modular, thermally stable, versatile, and adaptable to study navigation through thermal landscapes in insects and other small motile animals. We used a specific setting of the TDS to investigate volunteer navigation through critical cold and hot temperatures in Drosophila melanogaster. We demonstrate that a thermally bold behavior (volunteer crossings through a Critical Temperature Zone, CTZ) characterized a fraction of flies in a sample, and that such a fraction was higher in an outbred population relative to isofemale lines. As set, the TDS generated a thermal gradient within the cold and hot CTZs, and the exploration of this gradient by flies did not relate simply with a tendency to be thermally bold. Mild fasting affected thermal exploration and boldness in complex manners, but thermal boldness was evident in both fasted and fed flies. Also, thermal boldness was not associated with individual critical temperatures. Finally, some flies showed consistent thermal boldness, as flies that performed an extreme thermal cross were more likely to perform a second cross compared with untested flies. We hypothesize that a simple "avoidance principle" is not the only behavioral drive for D. melanogaster facing extreme temperatures over space, and that this pattern may characterize other small motile ectothermic animals with analogous natural history. The physiological correlates, genetic architecture, and interspecific variation of thermal boldness deserve further consideration.

Sex-specific genetic (co)variances of standard metabolic rate, body mass and locomotor activity in Drosophila melanogaster

A longstanding focus in evolutionary physiology concerns the causes and consequences of variation in maintenance metabolism. Insight into this can be gained by estimating the sex-specific genetic architecture of maintenance metabolism alongside other, potentially correlated traits on which selection may also act, such as body mass and locomotor activity. This may reveal potential genetic constraints affecting the evolution of maintenance metabolism. Here, we used a half-sibling breeding design to quantify the sex-specific patterns of genetic (co)variance in standard metabolic rate (SMR), body mass and daily locomotor activity in Drosophila melanogaster. There was detectable additive genetic variance for all traits in both sexes. As expected, SMR and body mass were strongly and positively correlated, with genetic allometry exponents (b_A  ± SE) that were close to 2/3 in females (0.66 ± 0.16) and males (0.58 ± 0.32). There was a significant and positive genetic correlation between SMR and locomotor activity in males, suggesting that alleles that increase locomotion have pleiotropic effects on SMR. Sexual differences in the genetic architecture were largely driven by a difference in genetic variance in locomotor activity between the sexes. Overall, genetic variation was mostly shared between males and females, setting the stage for a potential intralocus sexual conflict in the face of sexually antagonistic selection.

Metabolic cold adaptation in the Asiatic toad: intraspecific comparison along an altitudinal gradient

The metabolic cold adaptation (MCA) hypothesis predicts an increase in metabolic rate and thermal sensitivity of poikilotherms from cold environments as compared to those from warm environments, when measured under standardized conditions. This compensatory response is also expected to evolve in life history and behavioral traits if the reductions in these phenotypic traits at low temperature involves in a reduction in fitness. We investigated the extent to which the level of energy intake (measured as feeding rate), energy turnover (measured as standard metabolic rate, SMR) and the energy budget (energy allocation to growth and physical activity) are influenced by climatic conditions in three populations of the Asiatic toad (Bufo gargarizans) distributed across an altitudinal gradient of 1350 m in the Qionglai Mountains of Western China. We found a similar thermal reaction norm of SMR at both population and individual levels; therefore, the data did not support the MCA hypothesis. However, there was a co-gradient variation (CoGV) for mass change rate in which the high and medium altitudinal populations displayed slower mass change rates than their counterparts from low altitudes. Moreover, this CoGV pattern was accompanied by a low feeding rate and high physical activity for the high- and medium-altitude populations. Our results highlight that adjustments in energy intake and energy allocation to behaviors, but not energy allocation to metabolism of maintenance, could act as an energetic strategy to accommodate the varied growth efficiency in Asiatic toads along an altitudinal gradient.

Climate change and invasive species: a physiological performance comparison of invasive and endemic bees in Fiji

Anthropogenic climate change and invasive species are two of the greatest threats to biodiversity, affecting the survival, fitness and distribution of many species around the globe. Invasive species are often expected to have broad thermal tolerance, be highly plastic, or have high adaptive potential when faced with novel environments. Tropical island ectotherms are expected to be vulnerable to climate change as they often have narrow thermal tolerance and limited plasticity. In Fiji, only one species of endemic bee, Homalictus fijiensis, is commonly found in the lowland regions, but two invasive bee species, Braunsapis puangensis and Ceratina dentipes, have recently been introduced into Fiji. These introduced species pollinate invasive plants and might compete with H. fijiensis and other native pollinators for resources. To test whether certain performance traits promote invasiveness of some species, and to determine which species are the most vulnerable to climate change, we compared the thermal tolerance, desiccation resistance, metabolic rate and seasonal performance adjustments of endemic and invasive bees in Fiji. The two invasive species tended to be more resistant to thermal and desiccation stress than H. fijiensis, while H. fijiensis had greater capacity to adjust their CTmax with season, and H. fijiensis females tended to have higher metabolic rates than B. puangensis females. These findings provide mixed support for current hypotheses for the functional basis of the success of invasive species; however, we expect the invasive bees in Fiji to be more resilient to climate change because of their increased thermal tolerance and desiccation resistance.

Genomics of Recombination Rate Variation in Temperature-Evolved Drosophila melanogaster Populations

Meiotic recombination is a critical process that ensures proper segregation of chromosome homologs through DNA double-strand break repair mechanisms. Rates of recombination are highly variable among various taxa, within species, and within genomes with far-reaching evolutionary and genomic consequences. The genetic basis of recombination rate variation is therefore crucial in the study of evolutionary biology but remains poorly understood. In this study, we took advantage of a set of experimental temperature-evolved populations of Drosophila melanogaster with heritable differences in recombination rates depending on the temperature regime in which they evolved. We performed whole-genome sequencing and identified several chromosomal regions that appear to be divergent depending on temperature regime. In addition, we identify a set of single-nucleotide polymorphisms and associated genes with significant differences in allele frequency when the different temperature populations are compared. Further refinement of these gene candidates emphasizing those expressed in the ovary and associated with DNA binding reveals numerous potential candidate genes such as Hr38, EcR, and mamo responsible for observed differences in recombination rates in these experimental evolution lines thus providing insight into the genetic basis of recombination rate variation.

Relation between activity, endothermic performance and respiratory metabolism in two paper wasps: Polistes dominula and Polistes gallicus

Climate change is expected to produce shifts in species distributions as well as behavioural and physiological adaptations to find suitable conditions or to cope with the altered environment. The paper wasps Polistes dominula and Polistes gallicus are closely related species, native in the European Mediterranean region and North Africa. P. dominula has expanded its range to the relatively cooler climates of Northern and Eastern Europe, but P. gallicus remained in its original distribution area. In order to reveal their metabolic adaptation to the current climate conditions, and the impact on energy demand at future climate conditions, we investigated the respiratory metabolic rate (CO₂ production) of P. dominula from Austria and P. gallicus from Italy. In contrast to the metabolic cold adaptation hypothesis their standard metabolic rate was nearly the same and increased in a typical exponential course with increasing ambient temperature. The metabolic rate of active wasps was higher than the standard metabolic rate and increased with the wasps' activity. There was no obvious difference in the active metabolism between the two species, with the exception that some P. gallicus individuals showed some extraordinary high values. A simultaneous measurement of metabolic rate and body temperature revealed that increased CO₂ production was accompanied by endothermic activity. The two investigated populations of paper wasps are quite similar in their metabolic response to temperature, although they live in different climate regions. The spread of P. dominula into cooler regions did not have significant influence on their active and standard metabolic rate.

Recent warming reduces the reproductive advantage of large size and contributes to evolutionary downsizing in nature

Body size is a key functional trait that is predicted to decline under warming. Warming is known to cause size declines via phenotypic plasticity, but evolutionary responses of body size to warming are poorly understood. To test for warming-induced evolutionary responses of body size and growth rates, we used populations of mosquitofish (Gambusia affinis) recently established (less than 100 years) from a common source across a strong thermal gradient (19–33°C) created by geothermal springs. Each spring is remarkably stable in temperature and is virtually closed to gene flow from other thermal environments. Field surveys show that with increasing site temperature, body size distributions become smaller and the reproductive advantage of larger body size decreases. After common rearing to reveal recently evolved trait differences, warmer-source populations expressed slowed juvenile growth rates and increased reproductive effort at small sizes. These results are consistent with an adaptive basis of the plastic temperature–size rule, and they suggest that temperature itself can drive the evolution of countergradient variation in growth rates. The rapid evolution of reduced juvenile growth rates and greater reproduction at a small size should contribute to substantial body downsizing in populations, with implications for population dynamics and for ecosystems in a warming world.

Multigenerational exposure to elevated temperatures leads to a reduction in standard metabolic rate in the wild

In light of global climate change, there is a pressing need to understand and predict the capacity of populations to respond to rising temperatures. Metabolic rate is a key trait that is likely to influence the ability to cope with climate change. Yet, empirical and theoretical work on metabolic rate responses to temperature changes has so far produced mixed results and conflicting predictions.Our study addresses this issue using a novel approach of comparing fish populations in geothermally warmed lakes and adjacent ambient-temperature lakes in Iceland. This unique 'natural experiment' provides repeated and independent examples of populations experiencing contrasting thermal environments for many generations over a small geographic scale, thereby avoiding the confounding factors associated with latitudinal or elevational comparisons. Using Icelandic sticklebacks from three warm and three cold habitats, we measured individual metabolic rates across a range of acclimation temperatures to obtain reaction norms for each population.We found a general pattern for a lower standard metabolic rate (SMR) in sticklebacks from warm habitats when measured at a common temperature, as predicted by Krogh's rule. Metabolic rate differences between warm- and cold-habitat sticklebacks were more pronounced at more extreme acclimation temperatures, suggesting the release of cryptic genetic variation upon exposure to novel conditions, which can reveal hidden evolutionary potential. We also found a stronger divergence in metabolic rate between thermal habitats in allopatry than sympatry, indicating that gene flow may constrain physiological adaptation when dispersal between warm and cold habitats is possible.In sum, our study suggests that fish may diverge toward a lower SMR in a warming world, but this might depend on connectivity and gene flow between different thermal habitats. A free Plain Language Summary can be found within the Supporting Information of this article.

The effect of ambient oxygen on the thermal performance of a cockroach, Nauphoeta cinerea

The oxygen and capacity-limited thermal tolerance (OCLTT) hypothesis proposes that the thermal tolerance of an animal is shaped by its capacity to deliver oxygen in relation to oxygen demand. Studies testing this hypothesis have largely focused on measuring short-term performance responses in animals under acute exposure to critical thermal maximums. The OCLTT hypothesis, however, emphasises the importance of sustained animal performance over acute tolerance. The present study tested the effect of chronic hypoxia and hyperoxia during development on moderate to long-term performance indicators at temperatures spanning the optimal temperature for growth in the speckled cockroach, Nauphoeta cinerea In contrast to the predictions of the OCLTT hypothesis, development under hypoxia did not significantly reduce growth rate or running performance, and development under hyperoxia did not significantly increase growth rate or running performance. The effects of developmental temperature and oxygen on tracheal morphology and metabolic rate were also not consistent with OCLTT predictions, suggesting that oxygen delivery capacity is not the primary driver shaping thermal tolerance in this species. Collectively, these findings suggest that the OCLTT hypothesis does not explain moderate to long-term thermal performance in N.cinerea, which raises further questions about the generality of the hypothesis.

Developmental cost theory predicts thermal environment and vulnerability to global warming

Metazoans must develop from zygotes to feeding organisms. In doing so, developing offspring consume up to 60% of the energy provided by their parent. The cost of development depends on two rates: metabolic rate, which determines the rate that energy is used; and developmental rate, which determines the length of the developmental period. Both development and metabolism are highly temperature-dependent such that developmental costs should be sensitive to the local thermal environment. Here, we develop, parameterize and test developmental cost theory, a physiologically explicit theory that reveals that ectotherms have narrow thermal windows in which developmental costs are minimized (T_opt). Our developmental cost theory-derived estimates of T_opt predict the natural thermal environment of 71 species across seven phyla remarkably well (R² ~0.83). Developmental cost theory predicts that costs of development are much more sensitive to small changes in temperature than classic measures such as survival. Warming-driven changes to developmental costs are predicted to strongly affect population replenishment and developmental cost theory provides a mechanistic foundation for determining which species are most at risk. Developmental cost theory predicts that tropical aquatic species and most non-nesting terrestrial species are likely to incur the greatest increase in developmental costs from future warming.

Should I stay or should I go? Complex environments influence the developmental plasticity of flight capacity and flight-related trade-offs

Complex environments, characterized by co-varying factors (e.g. temperature and food availability) may cause animals to invest resources differentially into fitness-related traits. Thus, experiments manipulating multiple environmental factors concurrently provide valuable insight into the role of the environment in shaping not only important traits (e.g. dispersal capacity or reproduction), but also trait–trait interactions (e.g. trade-offs between traits). We used a multi-factorial design to manipulate variation in temperature (constant 28 °C vs. 28 ± 5 °C daily cycle) and food availability (unlimited vs. intermittent access) throughout development in the sand field cricket (Gryllus firmus). Using a univariate approach, we found that temperature variability and unlimited food availability promoted survival, development, growth, body size and/or reproductive investment. Using principal components as indices of resource allocation strategy, we found that temperature variability and unlimited food reduced investment into flight capacity in females. Thus, we detected a sex-specific trade-off between flight and other life-history traits that was developmentally plastic in response to variation in temperature and food availability. We develop an experimental and statistical framework to reveal shifts in correlative patterns of investment into different life-history traits. This approach can be applied to a range of biological systems to investigate how environmental complexity influences traits and trait trade-offs.

Phenotypic plasticity in locomotor performance of a monophyletic group of weevils accords with the warmer is better hypothesis

Ectotherms may respond to variable environmental conditions by altering their phenotypes. Phenotypic plasticity was initially thought to be beneficial to an organism's physiological fitness. Several alternative hypotheses, have, however, been proposed with growing empirical support. In this study, we test the full suite of hypotheses by investigating acclimation responses of locomotor performance for nine populations of five species of sub-Antarctic weevils, using static and fluctuating temperatures. Species showed typical locomotion thermal performance curves with temperature of the maximum speed (Topt) ranging between 22.3±1.7°C (mean±s.e.) and 31.1±0.7°C. For most species Topt was not affected by acclimation. For maximum speed (Umax), significant, positive effects of acclimation were found for all species except a supralittoral one. Individuals acclimated to 0°C showed much lower values than the other two acclimation treatments (15°C and fluctuating 0-15°C). Performance breadth (the index of the breadth of the curve, Tbr) typically showed little response to acclimation. None of the traits of the supralittoral species were affected by acclimation treatment. Responses to stable and fluctuating temperature treatments were similar. Our findings also revealed that the mean estimated activation energy 0.40±0.015 eV (mean±s.e.) was lower than for other herbivores, the category to which these weevils belong, suggesting that some form of compensation in the rate-temperature relationship may be evident. Thus, we typically found support for the warmer is better hypothesis for acclimation of locomotor performance, though some compensation is evident.

A widespread thermodynamic effect, but maintenance of biological rates through space across life's major domains

For over a century, the hypothesis of temperature compensation, the maintenance of similar biological rates in species from different thermal environments, has remained controversial. An alternative idea, that fitness is greater at higher temperatures (the thermodynamic effect), has gained increasing traction. This alternative hypothesis is also being used to understand large-scale biodiversity responses to environmental change. Yet evidence in favour of each of these contrasting hypotheses continues to emerge. In consequence, the fundamental nature of organismal thermal responses and its implications remain unresolved. Here, we investigate these ideas explicitly using a global dataset of 619 observations of four categories of organismal performance, spanning 14 phyla and 403 species. In agreement with both hypotheses, we show a positive relationship between the temperature of maximal performance rate (Topt) and environmental temperature (Tenv) for developmental rate and locomotion speed, but not growth or photosynthesis rate. Next, we demonstrate that relationships between Tenv and the maximal performance rate (Umax) are rarely significant and positive, as expected if a thermodynamic effect predominates. By contrast, a positive relationship between Topt and Umax is always present, but markedly weaker than theoretically predicted. These outcomes demonstrate that while some form of thermodynamic effect exists, ample scope is present for biochemical and physiological adaptation to thermal environments in the form of temperature compensation.

A simple genetic basis of adaptation to a novel thermal environment results in complex metabolic rewiring in Drosophila

BACKGROUND

Population genetic theory predicts that rapid adaptation is largely driven by complex traits encoded by many loci of small effect. Because large-effect loci are quickly fixed in natural populations, they should not contribute much to rapid adaptation.

RESULTS

To investigate the genetic architecture of thermal adaptation - a highly complex trait - we performed experimental evolution on a natural Drosophila simulans population. Transcriptome and respiration measurements reveal extensive metabolic rewiring after only approximately 60 generations in a hot environment. Analysis of genome-wide polymorphisms identifies two interacting selection targets, Sestrin and SNF4Aγ, pointing to AMPK, a central metabolic switch, as a key factor for thermal adaptation.

CONCLUSIONS

Our results demonstrate that large-effect loci segregating at intermediate allele frequencies can allow natural populations to rapidly respond to selection. Because SNF4Aγ also exhibits clinal variation in various Drosophila species, we suggest that this large-effect polymorphism is maintained by temporal and spatial temperature variation in natural environments.

Variation in somatic condition and testis mass in Feirana quadranus along an altitudinal gradient

The competition for fertilization among sperm from different males can drive variation in male reproductive investments. However, the mechanisms shaping reproductive allocation and the resulting variations in reproductive investment relative to environmental variables such as resource availability and male-male competition remain poorly known in frogs. Here, we investigated inter-population variation in male somatic condition and testis mass across four populations of the swelled vent frog Feirana quadranus along an altitudinal gradient. We found that relative testis mass did not increase with altitude, which was inconsistent with previous predictions that an increase in latitude and/or altitude should result in decreased sperm production in anurans due to shortened breeding seasons and the decline in resource availability. We also found no increase in somatic condition and male/female operational sex ratio with altitude. However, the somatic condition exhibited a positive correlation with testis mass, which indicated the condition-dependent testis size in F. quadranus. Moreover, an increase of testis mass with increasing male/female operational sex ratio suggest that male-male competition can result in an increased intensity of sperm competition, thereby increasing testis mass.

Metabolic cold adaptation contributes little to the interspecific variation in metabolic rates of 65 species of Drosophilidae

Metabolic cold adaptation (MCA) is a controversial hypothesis suggesting that cold adapted species display an elevated metabolic rate (MR) compared to their warm climate relatives. Here we test for the presence of MCA in 65 species of drosophilid flies reared under common garden conditions. MR was measured at both 10 and 20°C for both sexes and data were analyzed in relation to the natural thermal environment of these species. We found considerable interspecific variation in MR ranging from 1.34 to 8.99µWmg^-1 at 10°C. As predicted by Bergmann's rule body mass of fly species correlated negatively with annual mean temperature (AMT), such that larger species were found in colder environments. Because larger flies have a higher total MR we found MR to vary with AMT, however, after inclusion of mass as a co-variate we found no significant effect of AMT. Furthermore, we did not find that thermal sensitivity of MR (Q₁₀) varied with AMT. Based on this broad collection of species we therefore conclude that there is no adaptive pattern of metabolic cold adaptation within drosophilid species ranging from sub-arctic to tropical environments.