Drought and its legacy modulate the post-fire recovery of soil functionality and microbial community structure in a Mediterranean shrubland

Effect of plant-soil system on the restoration of community stability after wildfire in the northeast margin of Qinghai-Tibet plateau

Wildfires, as an environmental filter, are pivotal ecological disturbances that reshape plant communities and soil dynamics, playing a crucial role in regulating biogeographic patterns and ecosystem services. In this study, we aim to explore the effects of wildfires on forest ecosystems, specifically focusing on the plant-soil feedback mechanisms within the northeastern margin of the Qinghai-Tibet Plateau (QTP). Utilizing Partial Least Squares Path Modeling (PLS-PM), we investigated the interrelationships among soil physicochemical properties, enzyme activities, species diversity, and community stability at varying post-fire recovery stages (5, 15, and 23 years). Results indicated that in the early recovery stages, rapid changes in soil properties such as decreased pH (p < 0.001) and increased nutrient availability facilitate the emergence of early successional species with high resource utilization traits. As the ecosystem evolved toward a climax community, the soil and vegetation exhibit increased stability. Furthermore, soil enzyme activities displayed dynamic patterns that corresponded with changes in soil nutrient content, directly influencing the regeneration and diversity of plant communities. Importantly, our study documented a transition in the influence of soil properties on community stability from direct positive effects in initial recovery phases to negative impacts in later stages, while indirect benefits accrue through increased species diversity and enzyme activity. Vegetation composition and structure changed dynamically with recovery time during community succession. Plant nutrient absorption and accumulation affected nutrient dynamics in the soil, influencing plant regeneration, distribution, and diversity. Our results underscore the complex interactions between soil and vegetation that drive the recovery dynamics post-wildfire, highlighting the resilience of forest ecosystems to fire disturbances. This study contributes to the understanding of post-fire recovery processes and offers valuable insights for the management and restoration of fire-affected forest ecosystems.

Drought legacy interacts with wildfire to alter soil microbial communities in a Mediterranean climate-type forest

Mediterranean forest ecosystems will be increasingly affected by hotter drought and more frequent and severe wildfire events in the future. However, little is known about the longer-term responses of these forests to multiple disturbances and the forests' capacity to maintain ecosystem function. This is particularly so for below-ground organisms, which have received less attention than those above-ground, despite their essential contributions to forest function. We investigated rhizosphere microbial communities in a resprouting Eucalyptus marginata forest, southwestern Australia, that had experienced a severe wildfire four years previously, and a hotter drought eight years previously. Our aim was to understand how microbial communities are affected over longer-term trajectories by hotter drought and wildfire, singularly, and in combination. Fungal and bacterial DNA was extracted from soil samples, amplified, and subjected to high throughput sequencing. Richness, diversity, composition, and putative functional groups were then examined. We found a monotonic decrease in fungal, but not bacterial, richness and diversity with increasing disturbance with the greatest changes resulting from the combination of drought and wildfire. Overall fungal and bacterial community composition reflected a stronger effect of fire than drought, but the combination of both produced the greatest number of indicator taxa for fungi, and a significant negative effect on the abundance of several fungal functional groups. Key mycorrhizal fungi, fungal saprotrophs and fungal pathogens were found at lower proportions in sites affected by drought plus wildfire. Wildfire had a positive effect on bacterial hydrogen and bacterial nitrogen recyclers. Fungal community composition was positively correlated with live tree height. These results suggest that microbial communities, in particular key fungal functional groups, are highly responsive to wildfire following drought. Thus, a legacy of past climate conditions such as hotter drought can be important for mediating the responses of soil microbial communities to subsequent disturbance like wildfire.

Microbial regulation of feedbacks to ecosystem change

Microbes are key biodiversity components of all ecosystems and control vital ecosystem functions. Although we have just begun to unravel the scales and factors that regulate microbial communities, their role in mediating ecosystem stability in response to disturbances remains underexplored. Here, we review evidence of how, when, and where microbes regulate or drive disturbance feedbacks. Negative feedbacks dampen the impacts of disturbance, which maintain ecosystem stability, whereas positive feedbacks instead erode stability by amplifying the disturbance. Here we describe the processes underlying the responses to disturbance using a hierarchy of functional traits, and we exemplify how these may drive biogeochemical feedbacks. We suggest that the feedback potential of functional traits at different hierarchical levels is contingent on the complexity and heterogeneity of the environment.

Allelopathy-selected microbiomes mitigate chemical inhibition of plant performance

Allelopathy is a common and important stressor that shapes plant communities and can alter soil microbiomes, yet little is known about the direct effects of allelochemical addition on bacterial and fungal communities or the potential for allelochemical-selected microbiomes to mediate plant performance responses, especially in habitats naturally structured by allelopathy. Here, we present the first community-wide investigation of microbial mediation of allelochemical effects on plant performance by testing how allelopathy affects soil microbiome structure and how these microbial changes impact germination and productivity across 13 plant species. The soil microbiome exhibited significant changes to 'core' bacterial and fungal taxa, bacterial composition, abundance of functionally important bacterial and fungal taxa, and predicted bacterial functional genes after the addition of the dominant allelochemical native to this habitat. Furthermore, plant performance was mediated by the allelochemical-selected microbiome, with allelopathic inhibition of plant productivity moderately mitigated by the microbiome. Through our findings, we present a potential framework to understand the strength of plant-microbial interactions in the presence of environmental stressors, in which frequency of the ecological stress may be a key predictor of microbiome-mediation strength.

Effects of nitrogen addition and root fungal inoculation on the seedling growth and rhizosphere soil microbial community of Pinus tabulaeformis

Nitrogen (N) availability is significant in different ecosystems, but the response of forest plant-microbial symbionts to global N deposition remains largely unexplored. In this study, the effects of different N concentration levels on four types of fungi, Suillus granulatus (Sg), Pisolithus tinctorius (Pt), Pleotrichocladium opacum (Po), and Pseudopyrenochaeta sp. (Ps), isolated from the roots of Pinus tabulaeformis were investigated in vitro. Then, the effects of the fungi on the growth performance, nutrient uptake, and rhizosphere soil microbial community structure of P. tabulaeformis under different N addition conditions (0, 40, and 80 kg hm⁻² year⁻¹) were examined. The biomass and phytohormone contents of the Sg, Pt and Po strains increased with increasing N concentration, while those of the Ps strain first increased and then decreased. All four fungal strains could effectively colonize the plant roots and form a strain-dependent symbiosis with P. tabulaeformis. Although the effects depended on the fungal species, the growth and root development of inoculated seedlings were higher than those of uninoculated seedlings under N deficiency and normal N supply conditions. However, these positive effects disappeared and even became negative under high N supply conditions. The inoculation of the four fungal strains also showed significant positive effects on the shoot and root nutrient contents of P. tabulaeformis. Fungal inoculation significantly increased different microbial groups and the total soil microorganisms but decreased the microbial diversity under N deficiency stress. In summary, exogenous symbiotic fungal inoculations could increase the growth performance of P. tabulaeformis under N deficiency and normal N supply conditions, but the effects were negative under excessive N addition.

What happens after drought ends: synthesizing terms and definitions

Drought is intensifying globally with climate change, creating an urgency to understand ecosystem response to drought both during and after these events end to limit loss of ecosystem functioning. The literature is replete with studies of how ecosystems respond during drought, yet there are far fewer studies focused on ecosystem dynamics after drought ends. Furthermore, while the terms used to describe drought can be variable and inconsistent, so can those that describe ecosystem responses following drought. With this review, we sought to evaluate and create clear definitions of the terms that ecologists use to describe post-drought responses. We found that legacy effects, resilience and recovery were used most commonly with respect to post-drought ecosystem responses, but the definitions used to describe these terms were variable. Based on our review of the literature, we propose a framework for generalizing ecosystem responses after drought ends, which we refer to as 'the post-drought period'. We suggest that future papers need to clearly describe characteristics of the imposed drought, and we encourage authors to use the term post-drought period as a general term that encompasses responses after drought ends and use other terms as more specific descriptors of responses during the post-drought period.

Fire frequency and type regulate the response of soil carbon cycling and storage to fire across soil depths and ecosystems: A meta-analysis

Fire is a very common disturbance in terrestrial ecosystems and can give rise to significant effects on soil carbon (C) cycling and storage. Here, we conducted a global meta-analysis on the response of soil C cycling and storage across soil profiles (organic layer, 0-5 cm, 0-10 cm, 0-20 cm, and 20-100 cm) to fire reported in 308 studies across 383 sites and examined the role of fire frequency, fire type, soil type, ecosystem type, and post-fire time in regulating the response of soil C dynamics to fire. Overall, we found soil C cycling and storage were more responsive to one fire and wildfire as compared to frequent fire and prescribed fire, respectively. Soil respiration significantly decreased by 22 ± 9% by one fire, but was not significantly affected by frequent fire across ecosystems. One fire significantly reduced soil C content in the organic, 0-10 cm, and 20-100 cm layers by 27 ± 16%, 10 ± 9%, and 33 ± 18%, respectively, while frequent fire significantly reduced soil C content at a depth of 0-5 cm and 0-20 cm by 29 ± 8% and 16 ± 12%, respectively. Soil C cycling and storage showed little response to frequent prescribed fire. In addition, the response of soil C cycling and storage varied among different soil and ecosystem types, with a stronger response being observed in forest than in grassland. Within 20 years post-fire, soil C cycling and storage tended to recover only after one fire but not after frequent fire. We also found that soil physicochemical properties and microbial communities were more responsive to one fire than frequent fire, which could indirectly affect the effects of fire on soil C cycling and storage. The results of our study have filled some critical gaps in previous meta-analyses in fire ecology.

Soil bacterial assemblage responses to wildfire in low elevation southern California habitats

Understanding how wildfires and modification in plant assemblages interact to influence soil bacteria assemblages is a crucial step in understanding how these disturbances may influence ecosystem structure and function. Here, we resampled soil from three study sites previously surveyed in spring 2016 and 2017 and compared soil bacterial assemblages prior to and six months after (spring 2019) the 2018 Woolsey Fire in the Santa Monica Mountain National Recreation Area using Illumina sequencing of the 16S rRNA gene. All sites harbored both native California sage scrub and a non-native (grassland or forbland) habitat, allowing us to examine how fire influenced bacterial assemblages in common southern California habitats. Most results contrasted with our a-priori hypotheses: (1) richness and diversity increased following the fire, (2) heat/drought resistant and sensitive bacteria did not show consistent and differing patterns by increasing and decreasing, respectively, in relative abundance after the fire, and (3) bacterial assemblage structure was only minimally impacted by fire, with no differences being found between 2017 (pre-fire) and 2019 (post-fire) in three of the six habitats sampled. As sage scrub and non-native grasslands consistently harbored unique bacterial assemblages both before and following the fire, modifications in plant compositions will likely have legacy effects on these soils that persist even after a fire. Combined, our results demonstrate that bacterial assemblages in southern California habitats are minimally affected by fire. Because direct impacts of fire are limited, but indirect impacts, e.g., modifications in plant compositions, are significant, plant restoration efforts following a fire should strive to revegetate sage scrub areas to prevent legacy changes in bacterial composition.

Previous fire occurrence, but not fire recurrence, modulates the effect of charcoal and ash on soil C and N dynamics in Pinus pinaster Aiton forests

Understanding the effects of fire history on soil processes is key to characterise their resistance and resilience under future fire events. Wildfires produce pyrogenic carbonaceous material (PCM) that is incorporated into the soil, playing a critical role in the global carbon (C) cycle, but its interactions with soil processes are poorly understood. We evaluated if the previous occurrence of wildfires modulates the dynamic of soil C and nitrogen (N) and microbial community by soil ester linked fatty acids, after a new simulated low-medium intensity fire. Soils with a different fire history (none, one, two or three fires) were heat-shocked and amended with charcoal and/or ash derived from Pinus pinaster. Soil C and N mineralization rates were measured under controlled conditions, with burned soils showing lower values than unburned (without fire for more than sixty years). In general, no effects of fire recurrence were observed for any of the studied variables. Microbial biomass was lower in burned, with a clear dominance of Gram-positive bacteria in these soils. PCM amendments increased cumulative carbon dioxide (CO₂) production only in previously burned soils, especially when ash was added. This contrasted response to PCM between burned and unburned soils in CO₂ production could be related to the effect of the previous wildfire history on soil microorganisms. In burned soils some microorganisms might have been adapted to the resulting conditions after a new fire event. Burned soils showed a significant positive priming effect after PCM amendment, mainly ash, probably due to an increased pH and phosphorous availability. Our results reveal the role of different PCMs as drivers of C and N mineralization processes in burned soils when a new fire occurs. This is relevant for improving models that evaluate the net impact of fire in C cycling and to reduce uncertainties under future changing fire regimes scenarios.

Global Change and Forest Disturbances in the Mediterranean Basin: Breakthroughs, Knowledge Gaps, and Recommendations

Forest ecosystems in the Mediterranean Basin are mostly situated in the north of the Basin (mesic). In the most southern and dry areas, the forest can only exist where topography and/or altitude favor a sufficient availability of water to sustain forest biomass. We have conducted a thorough review of recent literature (2000–2021) that clearly indicates large direct and indirect impacts of increasing drought conditions on the forests of the Mediterranean Basin, their changes in surface and distribution areas, and the main impacts they have suffered. We have focused on the main trends that emerge from the current literature and have highlighted the main threatens and management solution for the maintenance of these forests. The results clearly indicate large direct and indirect impacts of increasing drought conditions on the forests of the Mediterranean Basin. These increasing drought conditions together with over-exploitation, pest expansion, fire and soil degradation, are synergistically driving to forest regression and dieback in several areas of this Mediterranean Basin. These environmental changes have triggered responses in tree morphology, physiology, growth, reproduction, and mortality. We identified at least seven causes of the changes in the last three decades that have led to the current situation and that can provide clues for projecting the future of these forests: (i) The direct effect of increased aridity due to more frequent and prolonged droughts, which has driven Mediterranean forest communities to the limit of their capacity to respond to drought and escape to wetter sites, (ii) the indirect effects of drought, mainly by the spread of pests and fires, (iii) the direct and indirect effects of anthropogenic activity associated with general environmental degradation, including soil degradation and the impacts of fire, species invasion and pollution, (iv) human pressure and intense management of water resources, (v) agricultural land abandonment in the northern Mediterranean Basin without adequate management of new forests, (vi) very high pressure on forested areas of northern Africa coupled with the demographic enhancement, the expansion of crops and higher livestock pressure, and the more intense and overexploitation of water resources uses on the remaining forested areas, and (vii) scarcity and inequality of human management and policies, depending on the national and/or regional governments and agencies, being unable to counteract the previous changes. We identified appropriate measures of management intervention, using the most adequate techniques and processes to counteract these impacts and thus to conserve the health, service capacity, and biodiversity of Mediterranean forests. Future policies should, moreover, promote research to improve our knowledge of the mechanisms of, and the effects on, nutrient and carbon plant-soil status concurrent with the impacts of aridity and leaching due to the effects of current changes. Finally, we acknowledge the difficulty to obtain an accurate quantification of the impacts of increasing aridity rise that warrants an urgent investment in more focused research to further develop future tools in order to counteract the negative effects of climate change on Mediterranean forests.

High fire frequency reduces soil fertility underneath woody plant canopies of Mediterranean ecosystems

Spatial heterogeneity of soil properties plays a major role in regulating ecosystem structure and functioning. In general, soil resources accumulate beneath woody plant-covered patches more than in the open interspace, making them function as fertility islands. Whilst wildfire is a common disturbance, little information is available on the role of particular plant species in maintaining soil fertility underneath in areas that are subjected to recurrent fires. This is an important issue given that land abandonment, together with a warmer and drier climate, is increasing fire danger in regions such as the Mediterranean. We determined whether increasing fire frequency, producing changes from a Quercus ilex L., woodland to a shrubland, modifies the effect of woody plant canopy on soil fertility. Additionally, the effect of fire history on species-specific leaf and litter nutrient concentration was assessed. Areas affected by none, one, two or three fires were selected. Within each area, soil fertility was measured underneath Cistus ladanifer L., Retama sphaerocarpa L., Phillyrea angustifolia L. and Quercus ilex canopies and in open interspace. Unburned soils located underneath P. angustifolia and Q. ilex canopies were significantly more fertile than in open interspaces. The microsite effect on soil fertility was fire frequency dependent. As fire frequency increased, the plant canopy microsite effect decreased for soil organic matter (SOM), cation exchange capacity (CEC), total C, P, Ca, K and Mg, labile phosphate, arylsulfatase and acid phosphatase activities. Total N, ammonium, nitrate and β-glucosidase activity decreased with increasing fire frequency, but their spatial variability was maintained along all fire frequency scenarios. Fire frequency decreased foliar N concentration but increased P concentration in some species, leading to a decrease in their N:P ratio. Our findings suggest that soil fertility heterogeneity will be reduced with increasing fire frequency. This could compromise the recovery of soil and ecosystem functioning.

Soil Heating at High Temperatures and Different Water Content: Effects on the Soil Microorganisms

Soil properties determining the thermal transmissivity, the heat duration and temperatures reached during soil heating are key factors driving the fire-induced changes in soil microbial communities. The aim of the present study is to analyze, under laboratory conditions, the impact of the thermal shock (infrared lamps reaching temperatures of 100 °C, 200 °C and 400 °C) and moisture level (0%, 25% and 50% per soil volume) on the microbial properties of three soil mixtures from different sites. The results demonstrated that the initial water content was a determinant factor in the response of the microbial communities to soil heating treatments. Measures of fire impact included intensity and severity (temperature, duration), using the degree-hours method. Heating temperatures produced varying thermal shock and impacts on biomass, bacterial activity and microbial community structure.

Drought promotes soil phosphorus transformation and reduces phosphorus bioavailability in a temperate forest

Drought can substantially alter ecosystem functions, especially biogeochemical cycles of key nutrients. As an essential but often limiting nutrient, P plays a central role in critical ecosystem processes (i.e. primary productivity). However, little is known about how drought can affect the soil phosphorus (P) cycle and its bioavailability in forest ecosystems. Here, we conducted a four-year field drought experiment using throughfall reduction approach to examine how drought can alter soil P dynamics and bioavailability in a warm temperate forest. We found that the P held in calcium phosphate was significantly decreased under drought, which was accompanied by the increases of inorganic and organic P bound with secondary minerals (Fe/Al oxides). These drought-induced P transformations can be well explained by the soil pH. The significant decline in soil pH under drought can drive the solubilization of P held in calcium phosphate. Our study further showed that drought directly decreased soil P bioavailability and altered the potential mechanisms of the replenishment of inorganic P into the soil solution. The potential of the inorganic P release driven by protons was reduced, while inorganic P release potentials driven by enzyme and organic acid were increased under drought. Therefore, our results strongly suggested that drought can significantly alter the soil P biogeochemical cycles and change the biological mechanisms underlying P bioavailability.

Fire Severity Drives the Natural Regeneration of Cytisus scoparius L. (Link) and Salix atrocinerea Brot. Communities and the Germinative Behaviour of These Species

Research Highlights: Data indicated that fire severity modulates natural regeneration of Cytisus scoparius and Salix atrocinerea communities and drives much stronger effects on the germination of the dominant species. Background and Objectives: Previous studies demonstrated that fire severity induces different behaviours in plant species. Mother plant age is an important feature that must also be considered in plans of forest restoration. The objectives were to determine, in field studies, the effect of fire severity on the natural regeneration of C. scoparius and S. atrocinerea communities, to know the role of mother plant age on the germination of seeds of C. scoparius and S. atrocinerea, and to quantify their germination response at different levels of fire severity, in laboratory settings. Material and Methods: We have analysed the role of fire severity on the natural regeneration of C. scoparius and S. atrocinerea communities considering cover and height. Forty 30 × 30 m plots were randomly located in C. scoparius and S. atrocinerea communities. Fire severity on the germination of dominant species was tested through different levels of smoke, charcoal, ash, and heat. Results: High severity reduced the vertical cover and growth in height of the two communities and favoured the increase of cover of woody species in the C. scoparius community and herbaceous species in the S. atrocinerea community. Mother plant age determined germination percentages of C. scoparius seeds. Germination of C. scoparius was increased by moderate heat, and heat and smoke; and fire severity greatly reduced germination of S. atrocinerea. Conclusions: The regeneration responses after fire were largely controlled by interactions between the fire severity and the individual species regeneration strategies. For restoration purposes, C. scoparius seeds should be treated with 80 °C and smoke for 10 min, in order to increase germination; however, Salix seeds should be used without treatment and immediately after dispersion.

Plant Growth and Soil Microbial Impacts of Enhancing Licorice With Inoculating Dark Septate Endophytes Under Drought Stress

This study mainly aimed to investigate the effects of dark septate endophytes (DSE) (Acrocalymma vagum, Paraboeremia putaminum, and Fusarium acuminatum) on the growth and microbial community composition in the rhizosphere soil of a medicinal plant, licorice (Glycyrrhiza uralensis), grown in the non-sterile soil under drought stress. The results showed that three DSE strains could effectively colonize the plant roots and form a strain-dependent symbiosis with licorice. Although drought stress declined the growth of licorice plants, these decreases were partly recovered by DSE inoculation. Specifically, the inoculation of A. vagum and P. putaminum significantly increased the biomass and glycyrrhizin content, whereas A. vagum and F. acuminatum increased glycyrrhizic acid content of host plants under drought stress. However, the inoculation of F. acuminatum showed significant negative effects on the shoot, root, and total biomass of licorice plants. In addition, the effects of DSE inoculation on the morphological, photosynthetic, and antioxidant parameters of licorice plants, and mineral nutrient and microbial community composition in the rhizosphere soil were dependent on the DSE species as well as water regime. Interestingly, DSE inoculation significantly increased AM fungi content under drought stress. In addition, DSE associated with water had a significant positive influence on soil organic matter, available phosphorus (P), AM fungi, leaf number, soluble protein, SOD activity, total root length, root branch, and glycyrrhizic acid content. Based on the results of variance partitioning analysis, 17.0, 34.0, 14.9, 40.1, 28.2, and 18.0% variations in shoot morphology, root morphology, plant biomass, active ingredient, photosynthetic parameters, and antioxidant parameters, respectively, were attributable to the presence of certain soil microorganisms. These findings suggest the possibility that DSE inoculation improved the root development and nutrient absorption of host plants, altered the soil microbiota, and might also contribute to plant growth and survival under drought conditions. As A. vagum exhibited positive effects on the plant biomass, morphological and physiological parameters, and active ingredient content in licorice plants under drought stress, it was considered to be the best fungus for licorice cultivation. These results contribute to the understanding of the ecological function of DSE fungi in dryland agriculture.