1
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Di Martino R, Picot A, Mitri S. Oxidative stress changes interactions between 2 bacterial species from competitive to facilitative. PLoS Biol 2024; 22:e3002482. [PMID: 38315734 PMCID: PMC10881020 DOI: 10.1371/journal.pbio.3002482] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/30/2023] [Revised: 02/21/2024] [Accepted: 12/22/2023] [Indexed: 02/07/2024] Open
Abstract
Knowing how species interact within microbial communities is crucial to predicting and controlling community dynamics, but interactions can depend on environmental conditions. The stress-gradient hypothesis (SGH) predicts that species are more likely to facilitate each other in harsher environments. Even if the SGH gives some intuition, quantitative modeling of the context-dependency of interactions requires understanding the mechanisms behind the SGH. In this study, we show with both experiments and a theoretical analysis that varying the concentration of a single compound, linoleic acid (LA), modifies the interaction between 2 bacterial species, Agrobacterium tumefaciens and Comamonas testosteroni, from competitive at a low concentration, to facilitative at higher concentrations where LA becomes toxic for one of the 2 species. We demonstrate that the mechanism behind facilitation is that one species is able to reduce reactive oxygen species (ROS) that are produced spontaneously at higher concentrations of LA, allowing for short-term rescue of the species that is sensitive to ROS and longer coexistence in serial transfers. In our system, competition and facilitation between species can occur simultaneously, and changing the concentration of a single compound can alter the balance between the two.
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Affiliation(s)
- Rita Di Martino
- Department of Fundamental Microbiology, University of Lausanne, Lausanne, Switzerland
| | - Aurore Picot
- Department of Fundamental Microbiology, University of Lausanne, Lausanne, Switzerland
- Center for Interdisciplinary Research in Biology (CIRB), Collège de France, CNRS, INSERM, Université PSL, Paris, France
| | - Sara Mitri
- Department of Fundamental Microbiology, University of Lausanne, Lausanne, Switzerland
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2
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Naven Narayanan, Shaw AK. Mutualisms impact species' range expansion speeds and spatial distributions. Ecology 2024; 105:e4171. [PMID: 37776264 DOI: 10.1002/ecy.4171] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 01/17/2023] [Revised: 06/20/2023] [Accepted: 08/23/2023] [Indexed: 10/02/2023]
Abstract
Species engage in mutually beneficial interspecific interactions (mutualisms) that shape their population dynamics in ecological communities. Species engaged in mutualisms vary greatly in their degree of dependence on their partner from complete dependence (e.g., yucca and yucca moth mutualism) to low dependence (e.g., generalist bee with multiple plant species). While current empirical studies show that, in mutualisms, partner dependence can alter the speed of a species' range expansion, there is no theory that provides conditions when expansion is sped up or slowed down. To address this, we built a spatially explicit model incorporating the population dynamics of two dispersing species interacting mutualistically. We explored how mutualisms impacted range expansion across a gradient of dependence (from complete independence to obligacy) between the two species. We then studied the conditions in which the magnitude of the mutualistic benefits could hinder versus enhance the speed of range expansion. We showed that either complete dependence, no dependence, or intermediate degree of dependence on a mutualist partner can lead to the greatest speeds of a focal species' range expansion based on the magnitude of benefits exchanged between partner species in the mutualism. We then showed how different degrees of dependence between species could alter the spatial distribution of the range expanding populations. Finally, we identified the conditions under which mutualistic interactions can turn exploitative across space, leading to the formation of a species' range limits. Our work highlights how couching mutualisms and mutualist dependence in a spatial context can provide insights about species range expansions, limits, and ultimately their distributions.
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Affiliation(s)
- Naven Narayanan
- Department of Ecology, Evolution, Behavior, University of Minnesota Twin Cities, Saint Paul, Minnesota, USA
| | - Allison K Shaw
- Department of Ecology, Evolution, Behavior, University of Minnesota Twin Cities, Saint Paul, Minnesota, USA
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3
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Ma Q, Su M. Herbivore-induced pollinator limitation increases community stability of mutualism-antagonism continuum. Biosystems 2023; 229:104929. [PMID: 37217159 DOI: 10.1016/j.biosystems.2023.104929] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2022] [Revised: 05/09/2023] [Accepted: 05/09/2023] [Indexed: 05/24/2023]
Abstract
Plants connect both pollinators and herbivores, and motivate the exploration of community structure in ecological networks merging antagonistic and mutualistic interactions. Evidence has shown that the two opposite plant-animal interactions are not independent from each other, in particular, herbivores can affect plant-pollinator pairwise interactions. Here, we explored effects of herbivore-induced pollinator limitation on community stability (including temporal stability and composition stability) of the mutualism-antagonism continuum. Our model demonstrated that pollinator limitation can boost up both temporal stability (i.e., the proportion of stable communities) and composition stability (i.e., species persistence), while the positive effects also depend on the strength of antagonistic and mutualistic interactions. Specifically, a community with higher temporal stability has a higher composition stability. Meanwhile, the correlations between network architecture and composition stability are also affected by pollinator limitation. Therefore, our results highlight that pollinator limitation can enhance community stability and may alter network architecture-composition stability relationship, and further advance the interplay between multiple types of species interactions within ecological networks.
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Affiliation(s)
- Qi Ma
- School of Mathematics, Hefei University of Technology, Hefei, 230009, China
| | - Min Su
- School of Mathematics, Hefei University of Technology, Hefei, 230009, China.
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4
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Godsoe W, Murray R, Iritani R. Species interactions and diversity: a unified framework using Hill numbers. OIKOS 2022. [DOI: 10.1111/oik.09282] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Affiliation(s)
- William Godsoe
- Dept of Pest Managament and Conservation, Lincoln Univ. Lincoln New Zealand
| | - Rua Murray
- School of Mathematics and Statistics, Univ. of Canterbury Christchurch New Zealand
| | - Ryosuke Iritani
- RIKEN Interdisciplinary Theoretical and Mathematical Sciences (iTHEMS) Wako Japan
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5
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Takashina N. Linking multi-level population dynamics: state, role, and population. PeerJ 2022; 10:e13315. [PMID: 35582614 PMCID: PMC9107789 DOI: 10.7717/peerj.13315] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2022] [Accepted: 03/31/2022] [Indexed: 01/13/2023] Open
Abstract
The dynamics of an ecological community can be described at different focal scales of the species, such as individual states or the population level. More detailed descriptions of ecological dynamics offer more information, but produce more complex models that are difficult to analyze. Adequately controlling the model complexity and the availability of multiple descriptions of the concerned dynamics maximizes our understanding of ecological dynamics. One of the central goals of ecological studies is to develop links between multiple descriptions of an ecological community. In this article, starting from a nonlinear state-level description of an ecological community (generalized McKendrick-von Foerster model), role-level and population-level descriptions (Lotka-Volterra model) are derived in a consistent manner. The role-level description covers a wider range of situations than the population-level description. However, using the established connections, it is demonstrated that the population-level description can be used to predict the equilibrium status of the role-level description. This approach connects state-, role-, and population-level dynamics consistently, and offers a justification for the multiple choices of model description.
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6
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Beck AE, Kleiner M, Garrell AK. Elucidating Plant-Microbe-Environment Interactions Through Omics-Enabled Metabolic Modelling Using Synthetic Communities. FRONTIERS IN PLANT SCIENCE 2022; 13:910377. [PMID: 35795346 PMCID: PMC9251461 DOI: 10.3389/fpls.2022.910377] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/01/2022] [Accepted: 05/16/2022] [Indexed: 05/10/2023]
Abstract
With a growing world population and increasing frequency of climate disturbance events, we are in dire need of methods to improve plant productivity, resilience, and resistance to both abiotic and biotic stressors, both for agriculture and conservation efforts. Microorganisms play an essential role in supporting plant growth, environmental response, and susceptibility to disease. However, understanding the specific mechanisms by which microbes interact with each other and with plants to influence plant phenotypes is a major challenge due to the complexity of natural communities, simultaneous competition and cooperation effects, signalling interactions, and environmental impacts. Synthetic communities are a major asset in reducing the complexity of these systems by simplifying to dominant components and isolating specific variables for controlled experiments, yet there still remains a large gap in our understanding of plant microbiome interactions. This perspectives article presents a brief review discussing ways in which metabolic modelling can be used in combination with synthetic communities to continue progress toward understanding the complexity of plant-microbe-environment interactions. We highlight the utility of metabolic models as applied to a community setting, identify different applications for both flux balance and elementary flux mode simulation approaches, emphasize the importance of ecological theory in guiding data interpretation, and provide ideas for how the integration of metabolic modelling techniques with big data may bridge the gap between simplified synthetic communities and the complexity of natural plant-microbe systems.
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Affiliation(s)
- Ashley E. Beck
- Department of Biological and Environmental Sciences, Carroll College, Helena, MT, United States
- *Correspondence: Ashley E. Beck,
| | - Manuel Kleiner
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, United States
| | - Anna-Katharina Garrell
- Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, United States
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7
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Liu R, Liu G. Complex dynamics of a stochastic uni-directional consumer-resource mutualism system. ECOLOGICAL COMPLEXITY 2021. [DOI: 10.1016/j.ecocom.2021.100965] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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8
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Hale KRS, Valdovinos FS. Ecological theory of mutualism: Robust patterns of stability and thresholds in two-species population models. Ecol Evol 2021; 11:17651-17671. [PMID: 35003630 PMCID: PMC8717353 DOI: 10.1002/ece3.8453] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/12/2021] [Accepted: 11/29/2021] [Indexed: 11/08/2022] Open
Abstract
Mutualisms are ubiquitous in nature, provide important ecosystem services, and involve many species of interest for conservation. Theoretical progress on the population dynamics of mutualistic interactions, however, comparatively lagged behind that of trophic and competitive interactions, leading to the impression that ecologists still lack a generalized framework to investigate the population dynamics of mutualisms. Yet, over the last 90 years, abundant theoretical work has accumulated, ranging from abstract to detailed. Here, we review and synthesize historical models of two-species mutualisms. We find that population dynamics of mutualisms are qualitatively robust across derivations, including levels of detail, types of benefit, and inspiring systems. Specifically, mutualisms tend to exhibit stable coexistence at high density and destabilizing thresholds at low density. These dynamics emerge when benefits of mutualism saturate, whether due to intrinsic or extrinsic density dependence in intraspecific processes, interspecific processes, or both. We distinguish between thresholds resulting from Allee effects, low partner density, and high partner density, and their mathematical and conceptual causes. Our synthesis suggests that there exists a robust population dynamic theory of mutualism that can make general predictions.
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Affiliation(s)
- Kayla R. S. Hale
- Department of Ecology and Evolutionary BiologyUniversity of MichiganAnn ArborMichiganUSA
| | - Fernanda S. Valdovinos
- Department of Environmental Science and PolicyUniversity of CaliforniaDavisCaliforniaUSA
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9
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Griffon D, Hernandez MJ, Ramírez D. Theoretical Clues for Agroecological Transitions: The Conuco Legacy and the Monoculture Trap. FRONTIERS IN SUSTAINABLE FOOD SYSTEMS 2021. [DOI: 10.3389/fsufs.2021.529271] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
The multiple ecological crisis that we are facing forces us to ponder the transition toward sustainable agricultural systems. Two key uncertainties need to be unveiled in addressing this problem; first, we need to identify the general features of alternative models that make them sustainable, and second, we need to explore how to build them from the (flawed) existing systems. In this work we explore these two questions using an ethnoecological and theoretical approach. In the exploration of alternative models, we evaluate an ancestral farming system, the conuco, characterized by, (i) the use of the ecological succession to constantly renew its properties, (ii) the increase of its biodiversity over time (in the horizontal and vertical components), and (iii) the self-regulation of the associated populations. Next, we characterize the topology of ecological networks of agroecosystems along the transition from a monoculture to a conuco-like agroecological system. We use topologies obtained from field information of conventional and agroecological systems as starting and arrival points. To model the dynamics of the systems and numerically simulate the transitions, we use a model based on Generalized Lotka-Volterra equations, where all types of population interactions are represented, with outcomes based on a density-dependent conditionality. The results highlight the relevance of increasing the connectance and diminishing the degree centrality of the conventional systems networks to promote their sustainability. Finally, we propose that the transitions between the monoculture and the agroecological systems could be figuratively interpreted as a cusp catastrophe, where the two systems are understood as alternative stable states and the path from one to the other cannot be reverted by just reversing the values of the control parameter. That is, once a system is in either of these states there is a tendency to stay and a resistance to move away from it. This implies that in the process of transition from a monoculture to a multi-diverse system, it is prudent not to despair if there are no immediate improvements in the performance of the system because once a certain point is reached, the system may experience an abrupt improvement.
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10
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McPeek SJ, Bronstein JL, McPeek MA. The Evolution of Resource Provisioning in Pollination Mutualisms. Am Nat 2021; 198:441-459. [PMID: 34559615 DOI: 10.1086/715746] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
AbstractResource dynamics influence the contemporary ecology of consumer-resource mutualisms. Suites of resource traits, such as floral nectar components, also evolve in response to different selective pressures, changing the ecological dynamics of the interacting species at the evolutionary equilibrium. Here we explore the evolution of resource-provisioning traits in a biotically pollinated plant that produces nectar as a resource for beneficial consumers. We develop a mathematical model describing natural selection on two quantitative nectar traits: maximum nectar production rate and maximum nectar reservoir volume. We use this model to examine how nectar production dynamics evolve under different ecological conditions that impose varying cost-benefit regimes on resource provisioning. The model results predict that natural selection favors higher nectar production when ecological factors limit the plant or pollinator's abundance (e.g., a lower productivity environment or a higher pollinator conversion efficiency). We also find that nectar traits evolve as a suite in which higher costs of producing one trait select for a compensatory increase in investment in the other trait. This empirically explicit approach to studying the evolution of consumer-resource mutualisms illustrates how natural selection acting via direct and indirect pathways of species interactions generates patterns of resource provisioning seen in natural systems.
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11
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Vaidya P, Stinchcombe JR. The Potential for Genotype-by-Environment Interactions to Maintain Genetic Variation in a Model Legume-Rhizobia Mutualism. PLANT COMMUNICATIONS 2020; 1:100114. [PMID: 33367267 PMCID: PMC7747969 DOI: 10.1016/j.xplc.2020.100114] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/30/2020] [Revised: 09/10/2020] [Accepted: 10/08/2020] [Indexed: 05/10/2023]
Abstract
The maintenance of genetic variation in mutualism-related traits is key for understanding mutualism evolution, yet the mechanisms maintaining variation remain unclear. We asked whether genotype-by-environment (G×E) interaction is a potential mechanism maintaining variation in the model legume-rhizobia system, Medicago truncatula-Ensifer meliloti. We planted 50 legume genotypes in a greenhouse under ambient light and shade to reflect reduced carbon availability for plants. We found an expected reduction under shaded conditions for plant performance traits, such as leaf number, aboveground and belowground biomass, and a mutualism-related trait, nodule number. We also found G×E for nodule number, with ∼83% of this interaction due to shifts in genotype fitness rank order across light environments, coupled with strong positive directional selection on nodule number regardless of light environment. Our results suggest that G×E can maintain genetic variation in a mutualism-related trait that is under consistent positive directional selection across light environments.
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Affiliation(s)
- Priya Vaidya
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON M5S3B2, Canada
- Corresponding author
| | - John R. Stinchcombe
- Department of Ecology and Evolutionary Biology, University of Toronto, Toronto, ON M5S3B2, Canada
- Koffler Scientific Reserve at Joker's Hill, University of Toronto, Toronto, ON M5S3B2, Canada
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12
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Selwyn M, Garrote PJ, Castilla AR, Fedriani JM. Interspecific interactions among functionally diverse frugivores and their outcomes for plant reproduction: A new approach based on camera-trap data and tailored null models. PLoS One 2020; 15:e0240614. [PMID: 33064761 PMCID: PMC7567357 DOI: 10.1371/journal.pone.0240614] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2020] [Accepted: 09/29/2020] [Indexed: 11/18/2022] Open
Abstract
The study of plant-frugivore interactions is essential to understand the ecology and evolution of many plant communities. However, very little is known about how interactions among frugivores indirectly affect plant reproductive success. In this study, we examined direct interactions among vertebrate frugivores sharing the same fruit resources. Then, we inferred how the revealed direct interspecific interactions could lead to indirect (positive or negative) effects on reproductive success of fleshy fruited plants. To do so, we developed a new analytical approach that combines camera trap data (spatial location, visitor species, date and time, activity) and tailored null models that allowed us to infer spatial-temporal interactions (attraction, avoidance or indifference) between pairs of frugivore species. To illustrate our approach, we chose to study the system composed by the Mediterranean dwarf palm, Chamaerops humilis, the Iberian pear tree, Pyrus bourgaeana, and their shared functionally diverse assemblages of vertebrate frugivores in a Mediterranean area of SW Spain. We first assessed the extent to which different pairs of frugivore species tend to visit the same or different fruiting individual plants. Then, for pairs of species that used the same individual plants, we evaluated their spatial-temporal relationship. Our first step showed, for instance, that some prey frugivore species (e.g. lagomorphs) tend to avoid those C. humilis individuals that were most visited by their predators (e.g. red foxes). Also, the second step revealed temporal attraction between large wild and domestic frugivore ungulates (e.g. red deer, cows) and medium-sized frugivores (e.g. red foxes) suggesting that large mammals could facilitate the C. humilis and P. bourgaeana exploitation to other smaller frugivores by making fruits more easily accessible. Finally, our results allowed us to identify direct interaction pathways, that revealed how the mutualistic and antagonistic relations between animal associates derived into indirect effects on both plants seed dispersal success. For instance, we found that large-sized seed predators (e.g. ungulates) had a direct positive effect on the likelihood of visits by legitimate seed dispersers (e.g. red foxes) to both fleshy fruited plants. Then, seed predators showed an indirect positive effect on the plants' reproductive success. Our new analytical approach provides a widely applicable framework for further studies on multispecies interactions in different systems beyond plant-frugivore interactions, including plant-pollinator interactions, the exploitation of plants by herbivores, and the use of carcasses by vertebrate scavengers.
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Affiliation(s)
- Miriam Selwyn
- Centro de Ecologia Aplicada “Prof. Baeta Neves” CEABN/InBIO, Instituto Superior de Agronomia, Universidade de Lisboa, Lisboa, Portugal
| | - Pedro J. Garrote
- Centro de Ecologia Aplicada “Prof. Baeta Neves” CEABN/InBIO, Instituto Superior de Agronomia, Universidade de Lisboa, Lisboa, Portugal
| | - Antonio R. Castilla
- Centro de Ecologia Aplicada “Prof. Baeta Neves” CEABN/InBIO, Instituto Superior de Agronomia, Universidade de Lisboa, Lisboa, Portugal
| | - Jose M. Fedriani
- Centro de Investigaciones sobre Desertificación (CIDE-CSIC) Carretera Moncada - Náquera, Moncada, Valencia, Spain
- Estación Biológica de Doñana (EBD - C.S.I.C.), Seville, Spain
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13
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Zhang Z, Yan C, Zhang H. Mutualism between antagonists: its ecological and evolutionary implications. Integr Zool 2020; 16:84-96. [PMID: 32930482 DOI: 10.1111/1749-4877.12487] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/27/2022]
Abstract
Mutualism or antagonism between species is often investigated within the framework of monotonic interactions of either mutualism or antagonism, but studies on transition from mutualism to antagonism (within the context of nonmonotonic interactions) have been largely ignored. In this paper, through a brief review and synthesis, we highlighted the role of mutualism between antagonists in regulating the ecological and evolutionary processes, as well as maintaining the stability and complexity of ecosystems. Mutualism between antagonistic species represents the density-dependent transition between mutualism and antagonism, which is beneficial to species coexistence and stability of complex ecosystems; thus, it should be favored by natural selection. Species may face selection of conflicting pressure on functional traits in co-balancing mutualism and antagonism, which may result in evolution of the dual character of species with moderate mutualistic or antagonistic traits. Coevolution and co-balance of these traits are driving forces in shaping mutualism-antagonism systems. Rewards for mutualists, punishment for exploiters, and competition of meta-communities are essential in stabilizing mutualism between antagonists. We appeal for more studies on mutualism between antagonists and its ecological and evolutionary implications by expanding the conventional ecological studies from monotonic to nonmonotonic regimes.
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Affiliation(s)
- Zhibin Zhang
- State Key Laboratory of Integrated Management of Pest Insects and Rodents in Agriculture, Institute of Zoology, Chinese Academy of Sciences, Beijing, China.,CAS Center for Excellence in Biotic Interactions, University of Chinese Academy of Sciences, Beijing, China
| | - Chuan Yan
- State Key Laboratory of Grassland Agro-ecosystem, Institute of Innovation Ecology & College of Life Sciences, Lanzhou University, Lanzhou, China
| | - Hongmao Zhang
- School of Life Sciences, Institute of Evolution and Ecology, Central China Normal University, Wuhan, China
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Zachar I, Boza G. Endosymbiosis before eukaryotes: mitochondrial establishment in protoeukaryotes. Cell Mol Life Sci 2020; 77:3503-3523. [PMID: 32008087 PMCID: PMC7452879 DOI: 10.1007/s00018-020-03462-6] [Citation(s) in RCA: 25] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2019] [Revised: 12/25/2019] [Accepted: 01/14/2020] [Indexed: 02/07/2023]
Abstract
Endosymbiosis and organellogenesis are virtually unknown among prokaryotes. The single presumed example is the endosymbiogenetic origin of mitochondria, which is hidden behind the event horizon of the last eukaryotic common ancestor. While eukaryotes are monophyletic, it is unlikely that during billions of years, there were no other prokaryote-prokaryote endosymbioses as symbiosis is extremely common among prokaryotes, e.g., in biofilms. Therefore, it is even more precarious to draw conclusions about potentially existing (or once existing) prokaryotic endosymbioses based on a single example. It is yet unknown if the bacterial endosymbiont was captured by a prokaryote or by a (proto-)eukaryote, and if the process of internalization was parasitic infection, slow engulfment, or phagocytosis. In this review, we accordingly explore multiple mechanisms and processes that could drive the evolution of unicellular microbial symbioses with a special attention to prokaryote-prokaryote interactions and to the mitochondrion, possibly the single prokaryotic endosymbiosis that turned out to be a major evolutionary transition. We investigate the ecology and evolutionary stability of inter-species microbial interactions based on dependence, physical proximity, cost-benefit budget, and the types of benefits, investments, and controls. We identify challenges that had to be conquered for the mitochondrial host to establish a stable eukaryotic lineage. Any assumption about the initial interaction of the mitochondrial ancestor and its contemporary host based solely on their modern relationship is rather perilous. As a result, we warn against assuming an initial mutually beneficial interaction based on modern mitochondria-host cooperation. This assumption is twice fallacious: (i) endosymbioses are known to evolve from exploitative interactions and (ii) cooperativity does not necessarily lead to stable mutualism. We point out that the lack of evidence so far on the evolution of endosymbiosis from mutual syntrophy supports the idea that mitochondria emerged from an exploitative (parasitic or phagotrophic) interaction rather than from syntrophy.
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Affiliation(s)
- István Zachar
- Evolutionary Systems Research Group, Institute of Evolution, Centre for Ecological Research, Klebelsberg Kunó str. 3., Tihany, 8237, Hungary.
- MTA-ELTE Theoretical Biology and Evolutionary Ecology Research Group, Department of Plant Taxonomy and Ecology, Eötvös Loránd University, Pázmány Péter sétány 1/c, Budapest, 1117, Hungary.
- Center for the Conceptual Foundations of Science, Parmenides Foundation, Kirchplatz 1, 82049, Munich, Germany.
| | - Gergely Boza
- Evolutionary Systems Research Group, Institute of Evolution, Centre for Ecological Research, Klebelsberg Kunó str. 3., Tihany, 8237, Hungary
- Evolution and Ecology Program, International Institute for Applied Systems Analysis (IIASA), Schlossplatz 1, 2361, Laxenburg, Austria
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15
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Martignoni MM, Hart MM, Garnier J, Tyson RC. Parasitism within mutualist guilds explains the maintenance of diversity in multi-species mutualisms. THEOR ECOL-NETH 2020. [DOI: 10.1007/s12080-020-00472-9] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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16
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Martinez ND. Allometric Trophic Networks From Individuals to Socio-Ecosystems: Consumer–Resource Theory of the Ecological Elephant in the Room. Front Ecol Evol 2020. [DOI: 10.3389/fevo.2020.00092] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022] Open
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17
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Hale KRS, Valdovinos FS, Martinez ND. Mutualism increases diversity, stability, and function of multiplex networks that integrate pollinators into food webs. Nat Commun 2020; 11:2182. [PMID: 32358490 PMCID: PMC7195475 DOI: 10.1038/s41467-020-15688-w] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/06/2019] [Accepted: 03/19/2020] [Indexed: 01/10/2023] Open
Abstract
Ecosystems are composed of complex networks of many species interacting in different ways. While ecologists have long studied food webs of feeding interactions, recent studies increasingly focus on mutualistic networks including plants that exchange food for reproductive services provided by animals such as pollinators. Here, we synthesize both types of consumer-resource interactions to better understand the controversial effects of mutualism on ecosystems at the species, guild, and whole-community levels. We find that consumer-resource mechanisms underlying plant-pollinator mutualisms can increase persistence, productivity, abundance, and temporal stability of both mutualists and non-mutualists in food webs. These effects strongly increase with floral reward productivity and are qualitatively robust to variation in the prevalence of mutualism and pollinators feeding upon resources in addition to rewards. This work advances the ability of mechanistic network theory to synthesize different types of interactions and illustrates how mutualism can enhance the diversity, stability, and function of complex ecosystems.
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Affiliation(s)
- Kayla R S Hale
- Department of Ecology and Evolutionary Biology, University of Michigan, 1105 North University Ave, Biological Sciences Building, Ann Arbor, MI, 48109, USA.
| | - Fernanda S Valdovinos
- Department of Ecology and Evolutionary Biology, University of Michigan, 1105 North University Ave, Biological Sciences Building, Ann Arbor, MI, 48109, USA
- Center for the Study of Complex Systems, University of Michigan, Weiser Hall Suite 700, 500 Church St, Ann Arbor, MI, 48109, USA
| | - Neo D Martinez
- School of Informatics, Computing, and Engineering, Indiana University, Room 302, 919 E. 10th Street, Bloomington, IN, 47408, USA
- Pacific Ecoinformatics and Computational Ecology Lab, Berkeley, CA, 94703, USA
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18
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Predators and dispersers: Context-dependent outcomes of the interactions between rodents and a megafaunal fruit plant. Sci Rep 2020; 10:6106. [PMID: 32269241 PMCID: PMC7142068 DOI: 10.1038/s41598-020-62704-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/24/2019] [Accepted: 03/14/2020] [Indexed: 12/03/2022] Open
Abstract
Many plant species bear fruits that suggest adaptation to seed dispersal by extinct megafauna. Present-day seed dispersal of these megafaunal plants is carried out by rodents, which can act as predators or dispersers; whether this interaction is primarily positive or negative can depend on the context. Here, we parameterized a stochastic model using data from the field and experimental arenas to estimate the effect of rodents on the recruitment of Myrcianthes coquimbensis -an Atacama Desert shrub with megafaunal fruits- and examine whether environmental conditions can alter the sign and strength of these rodent-plant interactions. We show that the outcome of these interactions is context-dependent: in wet conditions seed removal by rodents negatively impacts the recruitment probability of M. coquimbensis; in contrast, in dry conditions, the interaction with rodents increases recruitment success. In all cases, the strength of the effect of rodents on the recruitment success was determined mainly by their role as dispersers, which could be positive or negative. This study demonstrates that by caching seeds, rodents can be effective dispersers of a megafaunal fruit plant, but that the sign and magnitude of their effect on recruitment changes as a function of the environmental context in which the interaction occurs.
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19
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Song C, Von Ahn S, Rohr RP, Saavedra S. Towards a Probabilistic Understanding About the Context-Dependency of Species Interactions. Trends Ecol Evol 2020; 35:384-396. [PMID: 32007296 DOI: 10.1016/j.tree.2019.12.011] [Citation(s) in RCA: 24] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2019] [Revised: 12/11/2019] [Accepted: 12/20/2019] [Indexed: 01/10/2023]
Abstract
Observational and experimental studies have shown that an interaction class between two species (be it mutualistic, competitive, antagonistic, or neutral) may switch to a different class, depending on the biotic and abiotic factors within which species are observed. This complexity arising from the evidence of context-dependencies has underscored a difficulty in establishing a systematic analysis about the extent to which species interactions are expected to switch in nature and experiments. Here, we propose an overarching theoretical framework, by integrating probabilistic and structural approaches, to establish null expectations about switches of interaction classes across environmental contexts. This integration provides a systematic platform upon which it is possible to establish new hypotheses, clear predictions, and quantifiable expectations about the context-dependency of species interactions.
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Affiliation(s)
- Chuliang Song
- Department of Civil and Environmental Engineering, MIT, 77 Massachusetts Av., Cambridge 02139, MA, USA
| | - Sarah Von Ahn
- Department of Mathematics, MIT, 77 Massachusetts Av., Cambridge 02139, MA, USA
| | - Rudolf P Rohr
- Department of Biology - Ecology and Evolution, University of Fribourg Chemin du Musée 10, Fribourg CH-1700, Switzerland
| | - Serguei Saavedra
- Department of Civil and Environmental Engineering, MIT, 77 Massachusetts Av., Cambridge 02139, MA, USA.
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20
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Quintana-ascencio PF, Biazzo IN. Ecological Terms Strongly Impact Research and its Implications. Bioscience 2019. [DOI: 10.1093/biosci/biz099] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022] Open
Affiliation(s)
| | - Ian N Biazzo
- Department of Biology, University of Central Florida, Orlando, Florida, USA
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21
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Gil MA, Baskett ML, Schreiber SJ. Social information drives ecological outcomes among competing species. Ecology 2019; 100:e02835. [PMID: 31330041 DOI: 10.1002/ecy.2835] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 04/11/2019] [Revised: 06/15/2019] [Accepted: 06/25/2019] [Indexed: 11/06/2022]
Abstract
Through its behavior, an organism intentionally or unintentionally produces information. Use of this "social information" by surrounding conspecifics or heterospecifics is a ubiquitous phenomenon that can drive strong correlations in fitness-associated behaviors, such as predator avoidance, enhancing survival within and among competing species. By eliciting indirect positive interactions between competing individuals or species, social information might alter overall competitive outcomes. To test this potential, we present new theory that quantifies the effect of social information, modeled as predator avoidance signals/cues, on the outcomes from intraspecific and interspecific competition. Our analytical and numerical results reveal that social information can rescue populations from extinction and can shift the long-term outcome of competitive interactions from mutual exclusion to coexistence, or vice versa, depending on the relative strengths of intraspecific and interspecific social information and competition. Our findings highlight the importance of social information in determining ecological outcomes.
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Affiliation(s)
- M A Gil
- Department of Environmental Science and Policy and Center for Population Biology, University of California, Davis, California, 95616, USA.,Institute of Marine Sciences, University of California, Santa Cruz, California, 95060, USA.,Southwest Fisheries Science Center, National Oceanic and Atmospheric Administration, Santa Cruz, California, 95060, USA
| | - M L Baskett
- Department of Environmental Science and Policy and Center for Population Biology, University of California, Davis, California, 95616, USA
| | - S J Schreiber
- Department of Evolution and Ecology and Center for Population Biology, University of California, Davis, California, 95616, USA
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22
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Chomicki G, Weber M, Antonelli A, Bascompte J, Kiers ET. The Impact of Mutualisms on Species Richness. Trends Ecol Evol 2019; 34:698-711. [DOI: 10.1016/j.tree.2019.03.003] [Citation(s) in RCA: 42] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/04/2019] [Revised: 03/11/2019] [Accepted: 03/18/2019] [Indexed: 11/28/2022]
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23
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Kawatsu K, Kondoh M. Density-dependent interspecific interactions and the complexity-stability relationship. Proc Biol Sci 2019; 285:rspb.2018.0698. [PMID: 29794052 PMCID: PMC5998089 DOI: 10.1098/rspb.2018.0698] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2018] [Accepted: 04/26/2018] [Indexed: 11/12/2022] Open
Abstract
Ever since May theorized that communities with larger numbers of species or interspecific interactions are inherently unstable, the mechanism allowing for the stable existence of complex communities in nature has been a central question in ecology. The main efforts to answer this question have sought to identify non-random features of ecological systems that can reverse a negative complexity-stability relationship into a positive one, but are far from successful, especially in their generality. Here, using the traditional community matrix analysis, we show that variation in the density dependence of interspecific interactions, which should be ubiquitous in nature, can dramatically affect the complexity-stability relationship. More specifically, we reveal that a positive complexity-stability relationship arises when harmful interspecific effects have larger density dependence than beneficial ones, regardless of the signs (i.e. positive or negative) of their dependence. Furthermore, numerical simulations demonstrated the synergistic stabilizing effect of interaction type diversity and density-dependence variation. Thus, this concept of density-dependence variation advances our understanding of the complexity-stability relationship in the real world.
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Affiliation(s)
- Kazutaka Kawatsu
- Graduate School of Life Sciences, Tohoku University, 6-3, Aoba, Aramaki, Aoba-ku, Sendai 980-8578, Japan
| | - Michio Kondoh
- Graduate School of Life Sciences, Tohoku University, 6-3, Aoba, Aramaki, Aoba-ku, Sendai 980-8578, Japan
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24
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Yan C, Zhang Z. Impacts of consumer–resource interaction transitions on persistence and long‐term interaction outcomes of random ecological networks. OIKOS 2019. [DOI: 10.1111/oik.06002] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Affiliation(s)
- Chuan Yan
- State Key Laboratory of Integrated Management on Pest Insects and Rodents in Agriculture, Inst. of Zoology, Chinese Academy of Sciences CN‐100101 Beijing PR China
| | - Zhibin Zhang
- State Key Laboratory of Integrated Management on Pest Insects and Rodents in Agriculture, Inst. of Zoology, Chinese Academy of Sciences CN‐100101 Beijing PR China
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25
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Sun Z, Koffel T, Stump SM, Grimaud GM, Klausmeier CA. Microbial cross-feeding promotes multiple stable states and species coexistence, but also susceptibility to cheaters. J Theor Biol 2019; 465:63-77. [DOI: 10.1016/j.jtbi.2019.01.009] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/03/2018] [Revised: 12/07/2018] [Accepted: 01/08/2019] [Indexed: 01/22/2023]
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26
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Wang Y, Wu H. Global dynamics of parasitism-competition systems with one host and multiple parasites. J Theor Biol 2019; 461:268-275. [PMID: 30385310 DOI: 10.1016/j.jtbi.2018.10.053] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/13/2018] [Revised: 10/26/2018] [Accepted: 10/29/2018] [Indexed: 11/25/2022]
Abstract
This paper studies a new parasitism-competition model with one host and multiple parasites, where a plant is the host and nectar robbers are the parasites that compete for nectar of the plant but do not kill and eat the host itself. Based on the plant-nectar-robber interaction, a parasitism model is derived, which is different from previous parasitism models. Then the two-species model is extended to an n-dimensional system characterizing one plant and multiple robbers. Using dynamical system theory, qualitative behavior of the two-species model is exhibited by excluding existence of periodic solution, and global dynamics of the n-species system in the positive octant are completely shown. The dynamics demonstrate necessary and sufficient conditions for the principle of competitive exclusion to hold. It is shown that when the principle of competitive exclusion holds, at least one of the robbers is driven into extinction by other parasites while the others coexist with the plant at a steady state; When the principle of competitive exclusion does not hold, nectar robbers either coexist at a steady state or both go to extinction. The result also demonstrates a mechanism by which abiotic factors lead to persistence of nectar robbing.
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Affiliation(s)
- Yuanshi Wang
- School of Mathematics, Sun Yat-sen University, Guangzhou, 510275, P.R.China
| | - Hong Wu
- School of Mathematics, Sun Yat-sen University, Guangzhou, 510275, P.R.China.
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27
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Filho E. Team Dynamics Theory: Nomological network among cohesion, team mental models, coordination, and collective efficacy. SPORT SCIENCES FOR HEALTH 2018. [DOI: 10.1007/s11332-018-0519-1] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/25/2023]
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28
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García-Callejas D, Molowny-Horas R, Araújo MB. The effect of multiple biotic interaction types on species persistence. Ecology 2018; 99:2327-2337. [PMID: 30030927 DOI: 10.1002/ecy.2465] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 02/22/2018] [Revised: 07/03/2018] [Accepted: 07/05/2018] [Indexed: 11/08/2022]
Abstract
No species can persist in isolation from other species, but how biotic interactions affect species persistence is still a matter of inquiry. Is persistence more likely in communities with higher proportion of competing species, or in communities with more positive interactions? How do different components of community structure mediate this relationship? We address these questions using a novel simulation framework that generates realistic communities with varying numbers of species and different proportions of biotic interaction types within and across trophic levels. We show that when communities have fewer species, persistence is more likely if positive interactions-such as mutualism and commensalism-are prevalent. In species-rich communities, the disproportionate effect of positive interactions on persistence is diluted and different combinations of biotic interaction types can coexist without affecting persistence significantly. We present the first theoretical examination of how multiple-interaction networks with varying architectures relate to local species persistence, and provide insight about the underlying causes of stability in communities.
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Affiliation(s)
- David García-Callejas
- CREAF, Cerdanyola del Vallès, 08193, Spain.,Departamento de Biogeografía y Cambio Global, Museo Nacional de Ciencias Naturales, Consejo Superior de Investigaciones Científicas (CSIC), Calle José Gutiérrez Abascal 2, 28006, Madrid, Spain
| | | | - Miguel B Araújo
- Departamento de Biogeografía y Cambio Global, Museo Nacional de Ciencias Naturales, Consejo Superior de Investigaciones Científicas (CSIC), Calle José Gutiérrez Abascal 2, 28006, Madrid, Spain.,InBio/Centro de Investigação em Biodiversidade e Recursos Genéticos (CIBIO), Universidade de Évora, Largo dos Colegiais, 7000, Évora, Portugal.,Center for Macroecology, Evolution and Climate (CMEC), Natural History Museum of Denmark, University of Copenhagen, 2100, Copenhagen, Denmark
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29
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Zhou G, Song P, Wang Q. Survival of the fittest: understanding the effectiveness of update speed in the ecosystem of software platforms. JOURNAL OF ORGANIZATIONAL COMPUTING AND ELECTRONIC COMMERCE 2018. [DOI: 10.1080/10919392.2018.1482602] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 10/28/2022]
Affiliation(s)
- Geng Zhou
- School of Business, Nanjing University, Nanjing, Jiangsu Province, China
| | - Peijian Song
- School of Business, Nanjing University, Nanjing, Jiangsu Province, China
| | - Quansheng Wang
- School of Business, Nanjing University, Nanjing, Jiangsu Province, China
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30
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Gil MA, Hein AM, Spiegel O, Baskett ML, Sih A. Social Information Links Individual Behavior to Population and Community Dynamics. Trends Ecol Evol 2018; 33:535-548. [DOI: 10.1016/j.tree.2018.04.010] [Citation(s) in RCA: 96] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2017] [Revised: 04/13/2018] [Accepted: 04/16/2018] [Indexed: 11/17/2022]
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31
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Magal P, Zhang Z. Numerical simulations of a population dynamic model describing parasite destruction in a wild type pine forest. ECOLOGICAL COMPLEXITY 2018. [DOI: 10.1016/j.ecocom.2017.05.001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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32
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33
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Revilla TA, Křivan V. Competition, trait–mediated facilitation, and the structure of plant–pollinator communities. J Theor Biol 2018; 440:42-57. [DOI: 10.1016/j.jtbi.2017.12.019] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2017] [Revised: 12/17/2017] [Accepted: 12/18/2017] [Indexed: 10/18/2022]
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34
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Peaudecerf FJ, Bunbury F, Bhardwaj V, Bees MA, Smith AG, Goldstein RE, Croze OA. Microbial mutualism at a distance: The role of geometry in diffusive exchanges. Phys Rev E 2018; 97:022411. [PMID: 29548216 DOI: 10.1103/physreve.97.022411] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2017] [Indexed: 05/27/2023]
Abstract
The exchange of diffusive metabolites is known to control the spatial patterns formed by microbial populations, as revealed by recent studies in the laboratory. However, the matrices used, such as agarose pads, lack the structured geometry of many natural microbial habitats, including in the soil or on the surfaces of plants or animals. Here we address the important question of how such geometry may control diffusive exchanges and microbial interaction. We model mathematically mutualistic interactions within a minimal unit of structure: two growing reservoirs linked by a diffusive channel through which metabolites are exchanged. The model is applied to study a synthetic mutualism, experimentally parametrized on a model algal-bacterial co-culture. Analytical and numerical solutions of the model predict conditions for the successful establishment of remote mutualisms, and how this depends, often counterintuitively, on diffusion geometry. We connect our findings to understanding complex behavior in synthetic and naturally occurring microbial communities.
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Affiliation(s)
- François J Peaudecerf
- Department of Applied Mathematics and Theoretical Physics, University of Cambridge, Wilberforce Road, Cambridge CB3 0WA, United Kingdom
| | - Freddy Bunbury
- Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge CB2 3EA, United Kingdom
| | - Vaibhav Bhardwaj
- Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge CB2 3EA, United Kingdom
| | - Martin A Bees
- Department of Mathematics, University of York, Heslington, York Y010 5DD, United Kingdom
| | - Alison G Smith
- Department of Plant Sciences, University of Cambridge, Downing Street, Cambridge CB2 3EA, United Kingdom
| | - Raymond E Goldstein
- Department of Applied Mathematics and Theoretical Physics, University of Cambridge, Wilberforce Road, Cambridge CB3 0WA, United Kingdom
| | - Ottavio A Croze
- Cavendish Laboratory, University of Cambridge, J. J. Thomson Avenue, Cambridge CB3 0HE, United Kingdom
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35
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Marino NDAC, Romero GQ, Farjalla VF. Geographical and experimental contexts modulate the effect of warming on top-down control: a meta-analysis. Ecol Lett 2018; 21:455-466. [PMID: 29368449 DOI: 10.1111/ele.12913] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2017] [Accepted: 12/14/2017] [Indexed: 01/11/2023]
Abstract
Ecologists have extensively investigated the effect of warming on consumer-resource interactions, with experiments revealing that warming can strengthen, weaken or have no net effect on top-down control of resources. These experiments have inspired a body of theoretical work to explain the variation in the effect of warming on top-down control. However, there has been no quantitative attempt to reconcile theory with outcomes from empirical studies. To address the gap between theory and experiment, we performed a meta-analysis to examine the combined effect of experimental warming and top-down control on resource biomass and determined potential sources of variation across experiments. We show that differences in experimental outcomes are related to systematic variation in the geographical distribution of studies. Specifically, warming strengthened top-down control when experiments were conducted in colder regions, but had the opposite effect in warmer regions. Furthermore, we found that differences in the thermoregulation strategy of the consumer and openness of experimental arenas to dispersal can contribute to some deviation from the overall geographical pattern. These results reconcile empirical findings and support the expectation of geographical variation in the response of consumer-resource interactions to warming.
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Affiliation(s)
| | - Gustavo Quevedo Romero
- Laboratório de Interações Multitróficas e Biodiversidade (LIMBIO), Departamento de Biologia Animal, Instituto de Biologia, Universidade de Campinas (UNICAMP), Campinas, SP, CP 6109, Brazil
| | - Vinicius Fortes Farjalla
- Laboratorio Internacional en Cambio Global (LINCGlobal).,Departamento de Ecologia, Instituto de Biologia, Universidade Federal do Rio de Janeiro (UFRJ), Rio de Janeiro, RJ, CP 68020, Brazil
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36
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Combined effects of intra- and inter-specific non-monotonic functions on the stability of a two-species system. ECOLOGICAL COMPLEXITY 2018. [DOI: 10.1016/j.ecocom.2017.12.002] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
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37
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Maxin D, Georgescu P, Sega L, Berec L. Global stability of the coexistence equilibrium for a general class of models of facultative mutualism. JOURNAL OF BIOLOGICAL DYNAMICS 2017; 11:339-364. [PMID: 28653581 DOI: 10.1080/17513758.2017.1343871] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
Abstract
Many models of mutualism have been proposed and studied individually. In this paper, we develop a general class of models of facultative mutualism that covers many of such published models. Using mild assumptions on the growth and self-limiting functions, we establish necessary and sufficient conditions on the boundedness of model solutions and prove the global stability of a unique coexistence equilibrium whenever it exists. These results allow for a greater flexibility in the way each mutualist species can be modelled and avoid the need to analyse any single model of mutualism in isolation. Our generalization also allows each of the mutualists to be subject to a weak Allee effect. Moreover, we find that if one of the interacting species is subject to a strong Allee effect, then the mutualism can overcome it and cause a unique coexistence equilibrium to be globally stable.
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Affiliation(s)
- D Maxin
- a Department of Mathematics and Statistics , Valparaiso University , Valparaiso , IN , USA
| | - P Georgescu
- b Department of Mathematics , Technical University of Iaşi , Iaşi , Romania
| | - L Sega
- c Department of Mathematics , Augusta University , Augusta , GA , USA
| | - L Berec
- d Department of Ecology, Institute of Entomology , Biology Centre CAS , České Budějovice , Czech Republic
- e Faculty of Science , Institute of Mathematics and Biomathematics, University of South Bohemia , České Budějovice , Czech Republic
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38
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Ke PJ, Nakazawa T. Ontogenetic antagonism-mutualism coupling: perspectives on resilience of stage-structured communities. OIKOS 2017. [DOI: 10.1111/oik.04702] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
Affiliation(s)
- Po-Ju Ke
- Dept of Biology; Stanford Univ.; Stanford CA USA
| | - Takefumi Nakazawa
- Dept of Life Sciences; National Cheng Kung Univ., No.1, University Road; Tainan 701 Taiwan
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39
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Huang J, Liu Z, Ruan S. Bifurcation and temporal periodic patterns in a plant-pollinator model with diffusion and time delay effects. JOURNAL OF BIOLOGICAL DYNAMICS 2017; 11:138-159. [PMID: 27184331 DOI: 10.1080/17513758.2016.1181802] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/05/2023]
Abstract
This paper deals with a plant-pollinator model with diffusion and time delay effects. By considering the distribution of eigenvalues of the corresponding linearized equation, we first study stability of the positive constant steady-state and existence of spatially homogeneous and spatially inhomogeneous periodic solutions are investigated. We then derive an explicit formula for determining the direction and stability of the Hopf bifurcation by applying the normal form theory and the centre manifold reduction for partial functional differential equations. Finally, we present an example and numerical simulations to illustrate the obtained theoretical results.
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Affiliation(s)
- Jirong Huang
- a School of Mathematical Sciences , Beijing Normal University , Beijing , People's Republic of China
| | - Zhihua Liu
- a School of Mathematical Sciences , Beijing Normal University , Beijing , People's Republic of China
| | - Shigui Ruan
- b Department of Mathematics , University of Miami , Coral Gables , FL , USA
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40
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Deguines N, Brashares JS, Prugh LR. Precipitation alters interactions in a grassland ecological community. J Anim Ecol 2017; 86:262-272. [PMID: 27889916 DOI: 10.1111/1365-2656.12614] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2016] [Accepted: 11/07/2016] [Indexed: 11/28/2022]
Abstract
Climate change is transforming precipitation regimes world-wide. Changes in precipitation regimes are known to have powerful effects on plant productivity, but the consequences of these shifts for the dynamics of ecological communities are poorly understood. This knowledge gap hinders our ability to anticipate and mitigate the impacts of climate change on biodiversity. Precipitation may affect fauna through direct effects on physiology, behaviour or demography, through plant-mediated indirect effects, or by modifying interactions among species. In this paper, we examined the response of a semi-arid ecological community to a fivefold change in precipitation over 7 years. We examined the effects of precipitation on the dynamics of a grassland ecosystem in central California from 2007 to 2013. We conducted vegetation surveys, pitfall trapping of invertebrates, visual surveys of lizards and capture-mark-recapture surveys of rodents on 30 plots each year. We used structural equation modelling to evaluate the direct, indirect and modifying effects of precipitation on plants, ants, beetles, orthopterans, kangaroo rats, ground squirrels and lizards. We found pervasive effects of precipitation on the ecological community. Although precipitation increased plant biomass, direct effects on fauna were often stronger than plant-mediated effects. In addition, precipitation altered the sign or strength of consumer-resource and facilitative interactions among the faunal community such that negative or neutral interactions became positive or vice versa with increasing precipitation. These findings indicate that precipitation influences ecological communities in multiple ways beyond its recognized effects on primary productivity. Stochastic variation in precipitation may weaken the average strength of biotic interactions over time, thereby increasing ecosystem stability and resilience to climate change.
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Affiliation(s)
- Nicolas Deguines
- School of Environmental and Forest Sciences, University of Washington, Winkenwerder Hall, W Stevens Way NE, Seattle, WA, 98195, USA.,Department of Environmental Science, Policy, and Management, University of California Berkeley, Mulford Hall, Hilgard Way, Berkeley, CA, 94720, USA
| | - Justin S Brashares
- Department of Environmental Science, Policy, and Management, University of California Berkeley, Mulford Hall, Hilgard Way, Berkeley, CA, 94720, USA
| | - Laura R Prugh
- School of Environmental and Forest Sciences, University of Washington, Winkenwerder Hall, W Stevens Way NE, Seattle, WA, 98195, USA
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41
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Godsoe W, Franklin J, Blanchet FG. Effects of biotic interactions on modeled species' distribution can be masked by environmental gradients. Ecol Evol 2016; 7:654-664. [PMID: 28116060 PMCID: PMC5243196 DOI: 10.1002/ece3.2657] [Citation(s) in RCA: 44] [Impact Index Per Article: 5.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2016] [Revised: 10/31/2016] [Accepted: 11/05/2016] [Indexed: 11/30/2022] Open
Abstract
A fundamental goal of ecology is to understand the determinants of species' distributions (i.e., the set of locations where a species is present). Competition among species (i.e., interactions among species that harms each of the species involved) is common in nature and it would be tremendously useful to quantify its effects on species' distributions. An approach to studying the large‐scale effects of competition or other biotic interactions is to fit species' distributions models (SDMs) and assess the effect of competitors on the distribution and abundance of the species of interest. It is often difficult to validate the accuracy of this approach with available data. Here, we simulate virtual species that experience competition. In these simulated datasets, we can unambiguously identify the effects that competition has on a species' distribution. We then fit SDMs to the simulated datasets and test whether we can use the outputs of the SDMs to infer the true effect of competition in each simulated dataset. In our simulations, the abiotic environment influenced the effects of competition. Thus, our SDMs often inferred that the abiotic environment was a strong predictor of species abundance, even when the species' distribution was strongly affected by competition. The severity of this problem depended on whether the competitor excluded the focal species from highly suitable sites or marginally suitable sites. Our results highlight how correlations between biotic interactions and the abiotic environment make it difficult to infer the effects of competition using SDMs.
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Affiliation(s)
- William Godsoe
- Bio-Protection Research Centre Lincoln University Lincoln New Zealand
| | - Janet Franklin
- School of Geographical Sciences & Urban Planning Arizona State University Tempe AZ USA
| | - F Guillaume Blanchet
- Department of Mathematics and Statistics McMaster University Hamilton ON Canada; Département de Biologie Faculté des Sciences Université de Sherbrooke Sherbrooke QC Canada
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Abstract
Life on earth is enormously diverse, in part because each individual engages in countless interactions with its biotic and abiotic environment during its lifetime. Not only are there many such interactions, but any given interaction of each individual with, say, its neighbor or a nutrient could lead to a different effect on its fitness and on the dynamics of the population of which it is a member. Predicting those effects is an enduring challenge to the field of ecology. Using a simple laboratory system, Hoek and colleagues present evidence that resource availability can be a primary driver of variation between interactions. Their results suggest that a complex continuum of interaction outcomes can result from the simple combined effects of nutrient availability and density-dependent population dynamics. The future is rich with potential to integrate tractable experimental systems like theirs with hypotheses derived from studies of interactions in natural communities.
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Mougi A. The roles of amensalistic and commensalistic interactions in large ecological network stability. Sci Rep 2016; 6:29929. [PMID: 27406267 PMCID: PMC4942820 DOI: 10.1038/srep29929] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/22/2016] [Accepted: 06/24/2016] [Indexed: 02/05/2023] Open
Abstract
Ecological communities comprise diverse species and their interactions. Notably, ecological and evolutionary studies have revealed that reciprocal interactions such as predator–prey, competition, and mutualism, are key drivers of community dynamics. However, there is an argument that many species interactions are asymmetric, where one species unilaterally affects another species (amensalism or commensalism). This raises the unanswered question of what is the role of unilateral interactions in community dynamics. Here I use a theoretical approach to demonstrate that unilateral interactions greatly enhance community stability. The results suggested that amensalism and commensalism were more stabilizing than symmetrical interactions, such as competition and mutualism, but they were less stabilizing than an asymmetric antagonistic interaction. A mix of unilateral interactions increased stability. Furthermore, in communities with all interaction types, unilateral interactions tended to increase stability. This study suggests that unilateral interactions play a major role in maintaining communities, underlining the need to further investigate their roles in ecosystem dynamics.
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Affiliation(s)
- Akihiko Mougi
- Department of Biological Science, Faculty of Life and Environmental Science, Shimane University, 1060 Nishikawatsu-cho, Matsue 690-8504, Japan
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Lecomte X, Fedriani JM, Caldeira MC, Clemente AS, Olmi A, Bugalho MN. Too Many Is Too Bad: Long-Term Net Negative Effects of High Density Ungulate Populations on a Dominant Mediterranean Shrub. PLoS One 2016; 11:e0158139. [PMID: 27387134 PMCID: PMC4936687 DOI: 10.1371/journal.pone.0158139] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2016] [Accepted: 06/10/2016] [Indexed: 11/19/2022] Open
Abstract
Plant–animal interactions imply costs and benefits with net balance depending on interacting species and ecological context. Ungulates, in particular, confer costs (e.g., plant leaf consumption, flower bud predation) and benefits (e.g., plant overcompensation, seed dispersal) to plants. Magnitude of costs and benefits may be altered by habitat management or ecological conditions favoring high density ungulate populations. Little is known however on whether plant costs or benefits predominate over the years, or the long-term outcomes of plant-animal interactions in habitat types sustaining high density ungulate populations. We investigated how high density ungulate populations alter plant costs and benefits by quantifying ungulate long-term effects on the shrub Cistus ladanifer (Cistaceae) individual size, seed weight and number, seed bank, and population density, through a 12-year ungulate exclusion experiment in a Mediterranean scrubland. We monitored plant size and flower buds in plants exposed or protected from ungulates and number of developed capsules and seeds consumed (potential seed dispersal) by ungulates during three reproductive seasons. We found that ungulates negatively affected shrub size and led to a dramatically decline of shrub reproductive structures and seed production, affecting the plant reproductive cycle. Number of buds was 27 times higher and number of developed seed 5 times higher in ungulate-excluded as compared to ungulate-exposed plots. After 9 years of ungulate exclusion, the C. ladanifer seed bank was 2.6 times higher in ungulate-excluded plots. The population density of C. ladanifer was 4 times higher in ungulate-excluded plots. Our long-term experiment showed that high density ungulate populations can alter plant-animal interactions by reducing plant benefits and increasing plant costs.
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Affiliation(s)
- Xavier Lecomte
- Forest Research Center (CEF), School of Agriculture, University of Lisbon, Lisbon, Portugal
- * E-mail:
| | - José M. Fedriani
- Centre for Applied Ecology (CEABN-InBio), School of Agriculture, University of Lisbon, Lisbon, Portugal
- Estacion Biológica Doñana, CSIC, Seville, Spain
| | - Maria C. Caldeira
- Forest Research Center (CEF), School of Agriculture, University of Lisbon, Lisbon, Portugal
| | - Adelaide S. Clemente
- Centre for Ecology, Evolution and Environmental Changes (cE3c), Faculty of Sciences, University of Lisbon, Lisbon, Portugal
| | - Alessandro Olmi
- Centre for Applied Ecology (CEABN-InBio), School of Agriculture, University of Lisbon, Lisbon, Portugal
- Faculty of Agronomical Sciences, University of Florence, Florence, Italy
| | - Miguel N. Bugalho
- Centre for Applied Ecology (CEABN-InBio), School of Agriculture, University of Lisbon, Lisbon, Portugal
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Cunning R, Vaughan N, Gillette P, Capo TR, Matté JL, Baker AC. Dynamic regulation of partner abundance mediates response of reef coral symbioses to environmental change. Ecology 2015; 96:1411-20. [PMID: 26236853 DOI: 10.1890/14-0449.1] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
Regulating partner abunclance may allow symmotic organisms to mediate interaction outcomes, facilitating adaptive responses to environmental change. To explore the capacity for-adaptive regulation in an ecologically important endosymbiosis, we studied the population dynamics of symbiotic algae in reef-building corals under different abiotic contexts. We found high natural variability in symbiont abundance in corals across reefs, but this variability converged to different symbiont-specific abundances when colonies were maintained under constant conditions. When conditions changed seasonally, symbiont abundance readjusted to new equilibria. We explain these patterns using an a priori model of symbiotic costs and benefits to the coral host, which shows that the observed changes in symbiont abundance are consistent with the maximization of interaction benefit under different environmental conditions. These results indicate that, while regulating symbiont abundance helps hosts sustain maximum benefit in a dynamic environment, spatiotemporal variation in abiotic factors creates a broad range of symbiont abundances (and interaction outcomes) among corals that may account for observed natural variability in performance (e.g., growth rate) and stress tolerance (e.g., bleaching susceptibility). This cost or benefit framework provides a new perspective on the dynamic regulation of reef coral symbioses and illustrates that the dependence of interaction outcomes on biotic and abiotic contexts may be important in understanding how diverse mutualisms respond to environmental change.
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Revilla TA. Numerical responses in resource-based mutualisms: A time scale approach. J Theor Biol 2015; 378:39-46. [DOI: 10.1016/j.jtbi.2015.04.012] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2015] [Accepted: 04/09/2015] [Indexed: 10/23/2022]
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Jalilian A, Guan Y, Mateu J, Waagepetersen R. Multivariate product-shot-noise Cox point process models. Biometrics 2015; 71:1022-33. [PMID: 26102478 DOI: 10.1111/biom.12339] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2014] [Revised: 03/01/2015] [Accepted: 04/01/2015] [Indexed: 11/29/2022]
Abstract
We introduce a new multivariate product-shot-noise Cox process which is useful for modeling multi-species spatial point patterns with clustering intra-specific interactions and neutral, negative, or positive inter-specific interactions. The auto- and cross-pair correlation functions of the process can be obtained in closed analytical forms and approximate simulation of the process is straightforward. We use the proposed process to model interactions within and among five tree species in the Barro Colorado Island plot.
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Affiliation(s)
- Abdollah Jalilian
- Department of Statistics, Razi University, Bagh-e-Abrisham, Kermanshah 67149-67346, Iran
| | - Yongtao Guan
- Department of Management Science, University of Miami, Coral Gables, Florida 33124-6544, U.S.A
| | - Jorge Mateu
- Department of Mathematics, Universitat Jaume I, Castellón E-12071, Spain
| | - Rasmus Waagepetersen
- Department of Mathematical Sciences, Aalborg University, Fredrik Bajersvej 7G, DK-9220 Aalborg, Denmark
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Wang Y, Wang S. Persistence of pollination mutualisms in the presence of ants. Bull Math Biol 2015; 77:202-29. [PMID: 25559456 DOI: 10.1007/s11538-014-0057-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/15/2014] [Accepted: 12/18/2014] [Indexed: 11/29/2022]
Abstract
This paper considers plant-pollinator-ant systems in which the plant-pollinator interaction is mutualistic but ants have both positive and negative effects on plants. The ants also interfere with pollinators by preventing them from accessing plants. While a Beddington-DeAngelis (BD) formula can describe the plant-pollinator interaction, the formula is extended in this paper to characterize the pollination mutualism under the ant interference. Then, a plant-pollinator-ant system with the extended BD functional response is discussed, and global dynamics of the model demonstrate the mechanisms by which pollination mutualism can persist in the presence of ants. When the ant interference is strong, it can result in extinction of pollinators. Moreover, if the ants depend on pollination mutualism for survival, the strong interference could drive pollinators into extinction, which consequently lead to extinction of the ants themselves. When the ant interference is weak, a cooperation between plant-ant and plant-pollinator mutualisms could occur, which promotes survival of both ants and pollinators, especially in the case that ants (respectively, pollinators) cannot survive in the absence of pollinators (respectively, ants). Even when the level of ant interference remains invariant, varying ants' negative effect on plants can result in survival/extinction of both ants and pollinators. Therefore, our results provide an explanation for the persistence of pollination mutualism when there exist ants.
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Affiliation(s)
- Yuanshi Wang
- School of Mathematics and Computational Science, Sun Yat-sen University, Guangzhou, 510275, People's Republic of China
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