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Yang X, Aguado MT, Helm C, Zhang Z, Bleidorn C. New fossil of Gaoloufangchaeta advances the origin of Errantia (Annelida) to the early Cambrian. ROYAL SOCIETY OPEN SCIENCE 2024; 11:231580. [PMID: 38601033 PMCID: PMC11004674 DOI: 10.1098/rsos.231580] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/23/2023] [Revised: 02/27/2024] [Accepted: 02/28/2024] [Indexed: 04/12/2024]
Abstract
Molecular clock estimates suggest the origin of Annelida dates back to the Ediacaran period, which is in discordance with the first appearance of this taxon in the early Cambrian, as evidenced by the fossil records of stem-group and basally branching crown-group annelids. Using new material from the early Cambrian Guanshan biota (Cambrian Series 2, Stage 4), we re-interpret Gaoloufangchaeta bifurcus Zhao, Li & Selden, 2023, as the earliest known errantian annelid. Gaoloufangchaeta has a prominent anterior end bearing three pairs of putatively sensory appendages and a pair of anterior eyes; a muscular eversible pharynx with papillae is identified. The presence of enlarged parapodia with acicula-like structures and long capillary chaetae suggests a pelagic lifestyle for this taxon. Our phylogenetic analyses recover Gaoloufangchaeta within the Phyllodocida (Pleistoannelida, Errantia), extending the origin of Errantia back to the early Cambrian. Our data are in line with the hypothesis that Annelida diverged before the Cambrian and indicate both morphological and ecological diversification of annelids in the early Cambrian.
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Affiliation(s)
- Xiaoyu Yang
- Yunnan Key Laboratory for Palaeobiology, Institute of Palaeontology, Yunnan University, Kunming650500, People's Republic of China
- Animal Evolution and Biodiversity, Georg-August-Universität Göttingen, Göttingen37073, Germany
| | - M. Teresa Aguado
- Animal Evolution and Biodiversity, Georg-August-Universität Göttingen, Göttingen37073, Germany
| | - Conrad Helm
- Animal Evolution and Biodiversity, Georg-August-Universität Göttingen, Göttingen37073, Germany
| | - Zhiqian Zhang
- School of Fine Arts, Yunnan Normal University, Kunming650500, People's Republic of China
| | - Christoph Bleidorn
- Animal Evolution and Biodiversity, Georg-August-Universität Göttingen, Göttingen37073, Germany
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2
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Kalke P, Linder SS, Beckers P, Helm C. Palps across the tree - the neuronal innervation and development of sensory head appendages in Annelida. Front Neurosci 2024; 17:1310225. [PMID: 38239828 PMCID: PMC10794354 DOI: 10.3389/fnins.2023.1310225] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Accepted: 12/11/2023] [Indexed: 01/22/2024] Open
Abstract
Polychaetes inhabit a wide variety of habitats and show a great morphological diversity. In this context, a key morphological structure for adapting to their individual lifestyles and ecological niches are the prominent head appendages. In the last years more and more studies focused on the mainly sensory annelid head appendages - namely the antennae, palps, buccal lips and cirri - to unravel the evolutionary origin and phylogeny of Annelida. Unfortunately, comparable data for most of the polychaete families are lacking so far, especially when it comes to features of the larval anterior nervous system and the related innervation and potential homology of these head appendages. In this study, we therefore use an integrative morphological approach including immunohistochemistry and confocal laser scanning microscopy in combination with histological serial sections and 3D-visualizations. With special focus on the palp-like appendages, our data provides a closer look into the development of the larval anterior nervous system and the related sensory structures of three polychaete families representing major groups of the annelid tree of life. Hence, we investigate members of the palaeoannelid Magelonidae as well as basally-branching Amphinomidae, and the pleistoannelid Spionidae forming a taxon deeply nested within Sedentaria. Our comparative data of larval and adult neuronal features support the homology of feeding-palps across the annelid tree. Furthermore, our observations show that larval palps gradually transform into the adult ones while keeping a very similar neuronal innervation pattern. Solely for Amphinomidae a loss of larval palps during ontogenesis has to be assumed. Therefore, our investigations uncover important and so far unknown details in terms of structural homology across Annelida and provide important results necessary for our understanding of annelid evolution.
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Affiliation(s)
- Paul Kalke
- Helm Lab, Johann-Friedrich-Blumenbach-Institute, Animal Evolution and Biodiversity, University of Göttingen, Göttingen, Germany
| | - Samira S. Linder
- Helm Lab, Johann-Friedrich-Blumenbach-Institute, Animal Evolution and Biodiversity, University of Göttingen, Göttingen, Germany
| | - Patrick Beckers
- Institute of Evolutionary Biology and Zooecology, Evolutionary Biology and Ecology, University of Bonn, Bonn, Germany
| | - Conrad Helm
- Helm Lab, Johann-Friedrich-Blumenbach-Institute, Animal Evolution and Biodiversity, University of Göttingen, Göttingen, Germany
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Núñez J, Martínez A. Two new species and records of the genus Questa (Annelida: Orbiniidae) from Azores and Canary Islands, Central Atlantic Ocean. Zootaxa 2023; 5319:403-412. [PMID: 37518223 DOI: 10.11646/zootaxa.5319.3.6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2023] [Indexed: 08/01/2023]
Abstract
We here report two new species of meiofaunal orbiniids belonging to the genus Questa Hartman, 1966, which have been discovered during benthic surveys conducted around the Azores and the Canary Islands. The new species, Q. manuelgerardi n. sp. and Questa ericnunezi n. sp., are described, figured and discussed in detail. Questa manuelgerardi n. sp., endemic from the Azores, is characterized by the lack of furcate chaetae and branchiae, and by the presence of two pairs of anal cirri. Questa ericnunezi endemic from the Canary Island, is defined by the presence of furcate chaetae, 12-18 pairs of branchiae, and two pairs of anal cirri. In addition, new records of the species Q. caudicirra Hartman, 1966 are provided. An identification key to the 12 known species of Questa is also included.
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Affiliation(s)
- Jorge Núñez
- Laboratorio de Bentos; Departamento de Biología Animal; Edafología y Geología; Sección de Biología; Facultad de Ciencias; Universidad de La Laguna; 38206 La Laguna; Tenerife; Canary Islands; Spain.
| | - Alejandro Martínez
- Molecular Ecology Group; Water Research Institute; National Research Council of Italy; Largo Tonolli 50; 28922 Verbania; Italy.
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Gonzalez BC, González VL, Martínez A, Worsaae K, Osborn KJ. A transcriptome-based phylogeny for Polynoidae (Annelida: Aphroditiformia). Mol Phylogenet Evol 2023:107811. [PMID: 37169231 DOI: 10.1016/j.ympev.2023.107811] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/30/2022] [Revised: 03/31/2023] [Accepted: 05/05/2023] [Indexed: 05/13/2023]
Abstract
Polynoidae is the most diverse radiation of Aphroditiformia and one of the most successful groups of all Annelida in terms of diversity and habitats colonized. With such an unmatched diversity, phylogenetic investigations have struggled to understand their evolutionary relationships. Previous phylogenetic analyses have slowly increased taxon sampling and employed methodologies, but despite their diversity and biological importance, large genomic sampling is limited. To investigate the internal relationships within Polynoidae, we conducted the first phylogenomic analyses of the group based on 12 transcriptomes collected from species inhabiting a broad array of habitats, including shallow and deep waters, as well as hydrothermal vents, anchialine caves and the midwater. Our phylogenomic analyses of Polynoidae recovered congruent tree topologies representing the clades Polynoinae, Macellicephalinae and Lepidonotopodinae. Members of Polynoinae and Macellicephalinae clustered in well supported and independent clades. In contrast, Lepidonotopodinae taxa were always recovered nested within Macellicephalinae. Though our sampling only covers a small proportion of the species known for Polynoidae, our results provide a robust phylogenomic framework to build from, emphasizing previously hypothesized relationships between Macellicephalinae and Lepidonotopodinae taxa, while providing new insights on the origin of enigmatic cave and pelagic lineages.
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Affiliation(s)
- Brett C Gonzalez
- Smithsonian Institution, National Museum of Natural History, Department of Invertebrate Zoology, P.O. Box 37012, Washington D.C., USA.
| | - Vanessa L González
- Global Genome Initiative, National Museum of Natural History, Smithsonian Institution, P.O. Box 37012, Washington, D.C., USA
| | - Alejandro Martínez
- Molecular Ecology Group (MEG), Water Research Institute (IRSA), National Research Council of Italy (CNR), Largo Tonolli, 50, 28922. Pallanza, Italy
| | - Katrine Worsaae
- Marine Biological Section, Department of Biology, University of Copenhagen, Universitetsparken 4, Copenhagen Ø, Denmark
| | - Karen J Osborn
- Smithsonian Institution, National Museum of Natural History, Department of Invertebrate Zoology, P.O. Box 37012, Washington D.C., USA; Monterey Bay Aquarium Research Institute, 7700 Sandholdt Road, Moss Landing, CA 95039, USA
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5
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Fedorov D, Knorre D, Kolbasova G, Neretina T. Mitochondrial genome of Pseudopotamilla reniformis (Annelida: Sabellidae). Mitochondrial DNA B Resour 2023; 8:149-151. [PMID: 36685650 PMCID: PMC9848243 DOI: 10.1080/23802359.2022.2164230] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/17/2023] Open
Abstract
Here, we report the complete mitochondrial genome of sabellid Pseudopotamilla reniformis (Bruguière, 1789) (16,408 bp) and comprised of two ribosomal RNAs, the ubiquitous set of 13 protein-coding sequences, and 22 tRNAs. The order of protein-coding genes is consistent with the proposed conserved pattern, which contradicts recent discovery in other members of the family (Sabella spallanzanii in Daffe et al., 2021 and Bispira melanostigma in Hornfeck et al., 2022).
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Affiliation(s)
- Dmitry Fedorov
- Skolkovo Institute of Science and Technology, Moscow, Russia
| | - Dmitry Knorre
- Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia
| | - Glafira Kolbasova
- Pertsov White Sea Biological Station, Lomonosov Moscow State University, Moscow, Russia
| | - Tatiana Neretina
- Skolkovo Institute of Science and Technology, Moscow, Russia,Institute for Information Transmission Problems (Kharkevich Institute), Russian Academy of Sciences, Moscow, Russia,CONTACT Tatiana Neretina Institute for Information Transmission Problems (Kharkevich Institute), Russian Academy of Sciences, Moscow, Russia
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Tilic E, Herkenrath T, Kirfel G, Bartolomaeus T. The cellular 3D printer of a marine bristle worm-chaetogenesis in Platynereis dumerilii (Audouin & Milne Edwards, 1834) (Annelida). Cell Tissue Res 2023; 391:305-322. [PMID: 36562865 PMCID: PMC9889436 DOI: 10.1007/s00441-022-03731-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/03/2022] [Accepted: 12/08/2022] [Indexed: 12/24/2022]
Abstract
Annelid chaetae are extracellular chitinous structures that are formed in an extracellular epidermal invagination, the chaetal follicle. The basalmost cell of this follicle, the chaetoblast, serves like a 3D-printer as it dynamically shapes the chaeta. During chaetogenesis apical microvilli of the chaetoblast form the template for the chaeta, any structural details result from modulating the microvilli pattern. This study describes this process in detail in the model organism Platynereis dumerilii and clarifies some aspects of chaetogenesis in its close relative Nereis vexillosa, the first annelid in which the ultrastructure of chaetogenesis had been described. Nereid species possess compound chaetae characteristic for numerous subgroups of errant annelids. The distal most section of these chaetae is movable; a hinge connects this part of the chaeta to the shaft. Modulation of the microvilli and differences in their structure, diameter and number of microvilli, and their withdrawal and reappearance determine the shape of these compound chaetae. Chaetal structure and pattern also change during life history. While larvae possess a single type of chaeta (in addition to internal aciculae), juveniles and adults possess two types of chaetae that are replaced by large paddle-shaped chaetae in swimming epitokous stages. Chaetogenesis is a continuous process that lasts during the entire lifespan. The detailed developmental sequence of chaetae and their site of formation are very similar within species and species groups. We expect that similarity results from a conserved gene regulatory network making this an optimal system to test the phylogenetic affinity of taxa and the homology of their chaetae.
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Affiliation(s)
- Ekin Tilic
- Institute of Evolutionary Biology and Animal Ecology, Rheinische Friedrich-Wilhelms-Universität Bonn, An der Immenburg 1, Bonn, 53121 Germany ,Marine Biological Section, Department of Biology, University of Copenhagen, Copenhagen, Denmark
| | - Tim Herkenrath
- Institute of Evolutionary Biology and Animal Ecology, Rheinische Friedrich-Wilhelms-Universität Bonn, An der Immenburg 1, Bonn, 53121 Germany
| | - Gregor Kirfel
- Institute of Cell Biology, Rheinische Friedrich-Wilhelms-Universität Bonn, Ulrich-Haberland-Str. 61a, Bonn, 53121 Germany
| | - Thomas Bartolomaeus
- Institute of Evolutionary Biology and Animal Ecology, Rheinische Friedrich-Wilhelms-Universität Bonn, An der Immenburg 1, Bonn, 53121 Germany
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7
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Neal L, Wiklund H, Gunton LM, Rabone M, Bribiesca-Contreras G, Dahlgren TG, Glover AG. Abyssal fauna of polymetallic nodule exploration areas, eastern Clarion-Clipperton Zone, central Pacific Ocean: Amphinomidae and Euphrosinidae (Annelida, Amphinomida). Zookeys 2022; 1137:33-74. [PMID: 36760485 PMCID: PMC9836652 DOI: 10.3897/zookeys.1137.86150] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2022] [Accepted: 08/01/2022] [Indexed: 12/24/2022] Open
Abstract
This is a contribution in a series of taxonomic publications on benthic fauna of polymetallic nodule fields in the eastern abyssal Clarion-Clipperton Zone (CCZ). The material was collected during environmental surveys targeting exploration contract areas 'UK-1', 'OMS' and 'NORI-D', as well as an Area of Particular Environmental Interest, 'APEI-6'. The annelid families Amphinomidae and Euphrosinidae are investigated here. Taxonomic data are presented for six species from 41 CCZ-collected specimens as identified by a combination of morphological and genetic approaches; of the six species, three are here described as new, one species is likely to be new but in too poor condition to be formalised and the two others likely belong to known species. Description of three new species Euphrosinellageorgievae sp. nov., Euphrosinopsisahearni sp. nov., and Euphrosinopsishalli sp. nov. increases the number of formally described new annelid species from the targeted areas to 21 and CCZ-wide to 52. Molecular data suggest that four of the species reported here are known from CCZ only, but within CCZ they have a wide distribution. In contrast, the species identified as Bathychloeiacf.sibogae Horst, 1910 was found to have a wide distribution within the Pacific based on both morphological and molecular data, using comparative material from the abyssal South Pacific. Bathychloeiacf.balloniformis Böggemann, 2009 was found to be restricted to APEI-6 based on DNA data available from CCZ specimens only, but morphological data from other locations suggest potentially a wide abyssal distribution. The genus Euphrosinopsis was previously known only from Antarctic waters, and Euphrosinellageorgievae sp. nov. was recovered as a sister taxon to the Antarctic specimens of Euphrosinellacf.cirratoformis in our molecular phylogenetic analysis, strengthening the hypothesised link between the deep-sea and Antarctic benthic fauna.
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Affiliation(s)
- Lenka Neal
- Life Sciences Department, Natural History Museum, London SW7 5BD, UKLife Sciences Department, Natural History MuseumLondonUnited Kingdom
| | - Helena Wiklund
- Life Sciences Department, Natural History Museum, London SW7 5BD, UKLife Sciences Department, Natural History MuseumLondonUnited Kingdom,Department of Marine Sciences, University of Gothenburg, Box 463, 40530 Gothenburg, SwedenUniversity of GothenburgGothenburgSweden,Gothenburg Global Biodiversity Centre, Box 463, 40530 Gothenburg, SwedenGothenburg Global Biodiversity CentreGothenburgSweden
| | - Laetitia M. Gunton
- Australian Museum Research Institute, 1 William Street, Sydney NSW 2010, AustraliaAustralian Museum Research InstituteSydneyAustralia
| | - Muriel Rabone
- Life Sciences Department, Natural History Museum, London SW7 5BD, UKLife Sciences Department, Natural History MuseumLondonUnited Kingdom
| | - Guadalupe Bribiesca-Contreras
- Life Sciences Department, Natural History Museum, London SW7 5BD, UKLife Sciences Department, Natural History MuseumLondonUnited Kingdom
| | - Thomas G. Dahlgren
- Department of Marine Sciences, University of Gothenburg, Box 463, 40530 Gothenburg, SwedenUniversity of GothenburgGothenburgSweden,Gothenburg Global Biodiversity Centre, Box 463, 40530 Gothenburg, SwedenGothenburg Global Biodiversity CentreGothenburgSweden,NORCE Norwegian Research Centre, Bergen, NorwayNORCE Norwegian Research CentreBergenNorway
| | - Adrian G. Glover
- Life Sciences Department, Natural History Museum, London SW7 5BD, UKLife Sciences Department, Natural History MuseumLondonUnited Kingdom
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8
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Beckers P, Gebhardt T, Helm C. Loss of nervous system complexity – Morphological analyses shed light on the neuronal evolution in Myzostomida (Annelida). ACTA ZOOL-STOCKHOLM 2022. [DOI: 10.1111/azo.12447] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022]
Affiliation(s)
- Patrick Beckers
- Institute of Evolutionary Biology and Zooecology, University of Bonn Bonn Germany
| | - Tobias Gebhardt
- Institute of Evolutionary Biology and Zooecology, University of Bonn Bonn Germany
| | - Conrad Helm
- Johann‐Friedrich‐Blumenbach Institute for Zoology & Anthropology Animal Evolution and Biodiversity University of Göttingen Göttingen Germany
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9
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Zhong S, Ma X, Jiang Y, Qiao Y, Zhao L, Huang L, Huang G, Zhao Y, Liu Y, Chen X. The Draft Genome of Chinese Endemic Species Phascolosoma esculenta (Sipuncula, Phascolosomatidae) Reveals the Phylogenetic Position of Sipuncula. Front Genet 2022; 13:910344. [PMID: 35937983 PMCID: PMC9354978 DOI: 10.3389/fgene.2022.910344] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/01/2022] [Accepted: 05/26/2022] [Indexed: 11/13/2022] Open
Affiliation(s)
- Shengping Zhong
- Institute of Marine Drugs, Guangxi University of Chinese Medicine, Nanning, China
- Guangxi Engineering Technology Research Center for Marine Aquaculture, Guangxi Institute of Oceanology Co., Ltd., Beihai, China
- *Correspondence: Shengping Zhong, ; Yonghong Liu, ; Xiuli Chen,
| | - Xiaowan Ma
- Key Laboratory of Tropical Marine Ecosystem and Bioresource, Fourth Institute of Oceanography, Ministry of Natural Resources, Beihai, China
| | - Yan Jiang
- Guangxi Engineering Technology Research Center for Marine Aquaculture, Guangxi Institute of Oceanology Co., Ltd., Beihai, China
| | - Ying Qiao
- Key Laboratory of Tropical Marine Ecosystem and Bioresource, Fourth Institute of Oceanography, Ministry of Natural Resources, Beihai, China
| | - Longyan Zhao
- Institute of Marine Drugs, Guangxi University of Chinese Medicine, Nanning, China
| | - Lianghua Huang
- Institute of Marine Drugs, Guangxi University of Chinese Medicine, Nanning, China
| | - Guoqiang Huang
- Institute of Marine Drugs, Guangxi University of Chinese Medicine, Nanning, China
| | - Yongzhen Zhao
- Guangxi Key Laboratory of Aquatic Genetic Breeding and Healthy Aquaculture, Guangxi Academy of Fishery Sciences, Nanning, China
| | - Yonghong Liu
- Institute of Marine Drugs, Guangxi University of Chinese Medicine, Nanning, China
- *Correspondence: Shengping Zhong, ; Yonghong Liu, ; Xiuli Chen,
| | - Xiuli Chen
- Guangxi Key Laboratory of Aquatic Genetic Breeding and Healthy Aquaculture, Guangxi Academy of Fishery Sciences, Nanning, China
- *Correspondence: Shengping Zhong, ; Yonghong Liu, ; Xiuli Chen,
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10
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Müller J, Bartolomaeus T. Chaetal arrangement and type diversity in two Magelona species (Magelonidae, Annelida) with ultrastructural details of the internal support chaetae. J Morphol 2022; 283:852-866. [PMID: 35413137 DOI: 10.1002/jmor.21477] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2022] [Revised: 04/04/2022] [Accepted: 04/05/2022] [Indexed: 11/09/2022]
Abstract
The systematics of Annelida has repeatedly been changed based on morphological data, but more recently established transcriptomic approaches yielded a stable and widely accepted phylogenetic tree, placing Magelonidae and Oweniidae as sister group to all remaining annelids. This led to an increased interest in these groups in terms of morphological traits and their phylogenetic significance. As one of the most characteristic morphological characters of annelids, the chaetae of Magelonidae, are well investigated regarding their shape, but phylogenetically relevant aspects like their general arrangement are still poorly studied. Furthermore, some species possess abdominal internal support chaetae that no study has addressed in detail thus far. The chaetal arrangement and position of formative sites were studied in the differently expressed parapodia of the thorax, the ninth chaetiger and the abdomen of Magelona mirabilis and Magelona johnstoni. Our results show that all chaetigers primarily bore one row of chaetae per parapodial ramus, each with a single formative site. We also present the first histological as well as ultrastructural data on the magelonid support chaetae, showing that they represent internal hooded hooks, with which they share a common chaetal sac. Their distribution within Magelonidae, however, still requires a broader examination in order to evaluate their presence as a convergent or homologous trait. This article is protected by copyright. All rights reserved.
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Affiliation(s)
- Julian Müller
- Institute of Evolutionary Biology, University of Bonn
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11
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Toso A, Giangrande A. Development and ontogenetic changes of feeding behaviour during juvenile early growth of Eupolymnia nesidensis (Annelida, Terebellidae). INVERTEBR REPROD DEV 2022. [DOI: 10.1080/07924259.2022.2043466] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/18/2022]
Affiliation(s)
- Andrea Toso
- Department of Biological and Environmental Sciences and Technologies, University of Salento, Lecce, Italy
- Consorzio Nazionale Interuniversitario per le Scienze del Mare, (CoNISMa), Rome, Italy
| | - Adriana Giangrande
- Department of Biological and Environmental Sciences and Technologies, University of Salento, Lecce, Italy
- Consorzio Nazionale Interuniversitario per le Scienze del Mare, (CoNISMa), Rome, Italy
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Kobayashi G, Itoh H, Kojima S. Mitogenome of a stink worm (Annelida: Travisiidae) includes degenerate group II intron that is also found in five congeneric species. Sci Rep 2022; 12:4449. [PMID: 35292662 PMCID: PMC8924214 DOI: 10.1038/s41598-022-08103-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2021] [Accepted: 02/25/2022] [Indexed: 12/05/2022] Open
Abstract
Mitogenomes are useful for inferring phylogenetic relationships between organisms. Although the mitogenomes of Annelida, one of the most morphologically and ecologically diverse metazoan groups have been well sequenced, those of several families remain unexamined. This study determined the first mitogenome from the family Travisiidae (Travisia sanrikuensis), analyzed its mitogenomic features, and reconstructed a phylogeny of Sedentaria. The monophyly of the Terebellida + Arenicolida + Travisiidae clade is supported by molecular phylogenetic analysis. The placement of Travisiidae is unclear because of the lack of mitogenomes from closely related lineages. An unexpected intron appeared within the cox1 gene of T. sanrikuensis and in the same positions of five undescribed Travisia spp. Although the introns are shorter (790–1386 bp) than other group II introns, they can be considered degenerate group II introns due to type II intron maturase open reading frames, found in two of the examined species, and motifs characteristic of group II introns. This is likely the first known case in metazoans where mitochondrial group II introns obtained by a common ancestor are conserved in several descendants. Insufficient evolutionary time for intron loss in Travisiidae, or undetermined mechanisms may have helped maintain the degenerate introns.
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Affiliation(s)
- Genki Kobayashi
- Seto Marine Biological Laboratory, Field Science Education and Research Center, Kyoto University, 459 Shirahama, Nishimuro, Wakayama, 649-2211, Japan.
| | - Hajime Itoh
- National Institute for Environmental Studies, 16-2 Onogawa, Tsukuba, Ibaraki, 305-8506, Japan
| | - Shigeaki Kojima
- Atmosphere and Ocean Research Institute, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8564, Japan
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Purschke G, Vodopyanov S, Baller A, von Palubitzki T, Bartolomaeus T, Beckers P. Ultrastructure of cerebral eyes in Oweniidae and Chaetopteridae (Annelida) - implications for the evolution of eyes in Annelida. ZOOLOGICAL LETTERS 2022; 8:3. [PMID: 35078543 PMCID: PMC8787891 DOI: 10.1186/s40851-022-00188-0] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/10/2021] [Accepted: 10/23/2021] [Indexed: 06/14/2023]
Abstract
BACKGROUND Recent phylogenomic studies have revealed a robust, new hypothesis of annelid phylogeny. Most surprisingly, a few early branching lineages formed a basal grade, whereas the majority of taxa were categorized as monophyletic Pleistoannelida. Members of these basal groups show a comparatively simple organization lacking certain characters regarded to be annelid specific. Thus, the evolution of organ systems and the characteristics probably present in the last common annelid ancestor require reevaluation. With respect to light-sensitive organs, a pair of simple larval eyes is regarded as being present in their last common ancestor. However, the evolutionary origin and structure of adult eyes remain obscure. Typically, adult eyes are multicellular pigment cups or pinhole eyes with or without a lens comprising rhabdomeric photoreceptor cells (PRCs) and pigmented supportive cells (PSCs) in converse design. However, in the most basal lineages, eyes are only present in a few taxa, and thus far, their ultrastructure is unknown. RESULTS Ultrastructural investigations of members of Oweniidae and Chaetopteridae reveal a corresponding design of adult cerebral eyes and PRCs. The eyes in species of these groups are simple pigment spot eyes, either forming a flat patch or embedded in a tube-like invagination. They are part of the epidermis and comprise two cell types, PSCs and rhabdomeric PRCs. Both cell types bear microvilli and one more or less reduced cilium. However, the PRCs showed only a moderate increase in the apical membrane surface in the form of irregularly arranged microvilli intermingling with those of the PSCs; a densely arranged brush border of rhabdomeric microvilli was absent. Additionally, both cell types show certain characteristics elsewhere observable in typical epidermal supportive cells. CONCLUSIONS These findings shed new light on the evolutionary history of adult eyes in Annelida. Most likely, the adult eye of the annelid stem species was a pair of simple pigment spot eyes with only slightly specialized PSCs and PRCs being an integrative part of the epidermis. As is the case for the nuchal organs, typical pigment cup adult eyes presumably evolved later in the annelid phylogeny, namely, in the stem lineages of Amphinomida and Pleistoannelida.
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Affiliation(s)
- Günter Purschke
- Zoology and Developmental Biology, Department of Biology and Chemistry, Osnabrück University, Osnabrück, Germany.
| | - Stepan Vodopyanov
- Department of Invertebrate Zoology, Biological Faculty, Lomonosov Moscow State University, Moscow, Russia
| | - Anjilie Baller
- Zoology and Developmental Biology, Department of Biology and Chemistry, Osnabrück University, Osnabrück, Germany
- Present address: Department of Biology, Faculty II, University of Vechta, Vechta, Germany
| | - Tim von Palubitzki
- Zoology and Developmental Biology, Department of Biology and Chemistry, Osnabrück University, Osnabrück, Germany
| | - Thomas Bartolomaeus
- Institute of Evolutionary Biology and Ecology, University of Bonn, Bonn, Germany
| | - Patrick Beckers
- Institute of Evolutionary Biology and Ecology, University of Bonn, Bonn, Germany
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14
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Müller J, Bartolomaeus T, Tilic E. Formation and degeneration of scaled capillary notochaetae in Owenia fusiformis Delle Chiaje, 1844 (Oweniidae, Annelida). ZOOMORPHOLOGY 2021. [DOI: 10.1007/s00435-021-00547-z] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
AbstractPhylotranscriptomic studies of the past decade have repeatedly placed Oweniidae together with Magelonidae, as the sister group to remaining annelids. This newly established placement clearly makes them a key-lineage for understanding annelid evolution and morphology. One of the most prominent morphological features of all annelids are their chaetae. The arrangement and formation process (chaetogenesis) of these chitinous bristles have been studied extensively in hooked chaetae that are arranged in rows. However, the information on other types of chaetae is still scarce. In this study, we investigated the scaled capillary notochaetae of Owenia fusiformis, looking both into the formation process that causes the scaly surface ornamentation and into their arrangement within tight bundles. Our results demonstrate the incredible plasticity of chaetogenesis that allows forming a vast array of three-dimensional structures. The capillary chaetae of Owenia fusiformis are unique in lacking an enamel coating and the scales covering the apical surface of each chaeta are formed by a single microvillus of the chaetoblast. Furthermore, the bundle of chaetae has a peripherally located formative site and a central degenerative site and it appears to result from a secondary curling of the chaetal sac.
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May the palps be with you – new insights into the evolutionary origin of anterior appendages in Terebelliformia (Annelida). BMC ZOOL 2021; 6:30. [PMID: 37170288 PMCID: PMC10124185 DOI: 10.1186/s40850-021-00094-6] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Accepted: 10/19/2021] [Indexed: 01/21/2023] Open
Abstract
Abstract
Background
Head appendages in Annelida contribute significantly to the immense morphological diversity in this spiralian taxon. Nevertheless, the evolutionary origin of annelid antennae, palps, cirri and tentacles are part of vast theories and debates that took place over decades. One of these heavily discussed groups are the Terebelliformia, which bear numerous anterior tentacles originating from different regions of the head. The question, whether these tentacles are homologous to feeding palps in other annelids or if these structures evolved convergently in terebellids and the remaining taxa, has been highly debated in the past.
Results
By using morphological methods including immunohistochemistry, confocal microscopy, Azan-stained serial sections and 3D-visualisation, we are able to shed new light and a fresh look on the old question of the evolutionary origin of the buccal tentacles and their associated head structures in Terebelliformia. Our investigations show that the brains of the ampharetid Hypania invalida and the aulophora larvae of Lanice conchilega (Terebellidae) consist of a dorsal, more prominent and a more slender, ventral brain region. Neurite bundles innervating the buccal tentacles split off from the ventral and dorsal root within the ventral brain region and thus originate from the dorsal and ventral root of the circumoesophageal connectives. Hence, the observed neurite bundles fulfil the morphological criteria for the innervating neurite bundles of feeding palps known from Paleoannelida.
Conclusions
We disagree with former conclusions that buccal tentacles are part of the alimentary canal. Based on the presented data, the buccal tentacles of terebelliform taxa are innervated by neurite bundles and can be homologized with peristomial feeding palps of other Annelida.
Our comparative investigations reveal important insights into morphological changes during the evolution of anterior head appendages in Terebelliformia and Annelida in general. Nevertheless, our analyses also illustrate the gaps in knowledge and that more investigations throughout the annelid tree are necessary to explain and understand the huge diversity of annelid anterior appendages.
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Tilic E, Stiller J, Campos E, Pleijel F, Rouse GW. Phylogenomics resolves ambiguous relationships within Aciculata (Errantia, Annelida). Mol Phylogenet Evol 2021; 166:107339. [PMID: 34751138 DOI: 10.1016/j.ympev.2021.107339] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2021] [Revised: 10/23/2021] [Accepted: 10/27/2021] [Indexed: 10/20/2022]
Abstract
Aciculata (Eunicida + Phyllodocida) is among the largest clades of annelids, comprising almost half of the known diversity of all marine annelids. Despite the group's large size and biological importance, most phylogenomic studies on Annelida to date have had a limited sampling of this clade. The phylogenetic placement of many clades within Phyllodocida in particular has remained poorly understood. To resolve the relationships within Aciculata we conducted a large-scale phylogenomic analysis based on 24 transcriptomes (13 new), chosen to represent many family-ranked taxa that have never been included in a broad phylogenomic study. Our sampling also includes several enigmatic taxa with challenging phylogenetic placement, such as Histriobdella, Struwela, Lacydonia, Pilargis and the holopelagic worms Lopadorrhynchus, Travisiopsis and Tomopteris. Our robust phylogeny allows us to name and place some of these problematic clades and has significant implications on the systematics of the group. Within Eunicida we reinstate the names Eunicoidea and Oenonoidea. Within Phyllodocida we delineate Phyllodociformia, Glyceriformia, Nereidiformia, Nephtyiformia and Aphroditiformia. Phyllodociformia now includes: Lacydonia, Typhloscolecidae, Lopadorrhynchidae and Phyllodocidae. Nephtyiformia includes Nephtyidae and Pilargidae. We also broaden the delineation of Glyceriformia to include Sphaerodoridae, Tomopteridae and Glyceroidea (Glyceridae + Goniadidae). Furthermore, our study demonstrates and explores how conflicting, yet highly supported topologies can result from confounding signals in gene trees.
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Affiliation(s)
- Ekin Tilic
- Scripps Institution of Oceanography, UC San Diego, La Jolla, CA, USA; Institute of Evolutionary Biology and Animal Ecology, University of Bonn, Germany; Marine Biological Section, Department of Biology, University of Copenhagen, DK-2100 Copenhagen, Denmark.
| | - Josefin Stiller
- Centre for Biodiversity Genomics, Section for Ecology and Evolution, Department of Biology, University of Copenhagen, DK-2100 Copenhagen, Denmark
| | - Ernesto Campos
- Facultad de Ciencias, Universidad Autónoma de Baja California. Ensenada, Baja California, México
| | - Fredrik Pleijel
- Department of Marine Sciences, University of Gothenburg, Tjärnö, Sweden
| | - Greg W Rouse
- Scripps Institution of Oceanography, UC San Diego, La Jolla, CA, USA.
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Buhre JS, Purschke G. Ultrastructure and functional morphology of the dorsal organs in Scoloplos armiger (Annelida, Sedentaria, Orbiniida). ZOOMORPHOLOGY 2021. [DOI: 10.1007/s00435-021-00545-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/24/2022]
Abstract
AbstractAnnelids and particularly polychaetes possess a great variety of sensory organs and respond to numerous sensory stimuli. Although eyes and nuchal organs are comparatively well studied, the so-called dorsal organs are among the lesser-known sense organs in aquatic annelids. Moreover, they are known to be restricted to only two out of approximately 80 families of polychaetes—Orbiniidae and Spionidae—which are not closely related. These organs have been regarded as segmentally repeated nuchal organs in the latter taxon, but in Orbiniidae, data are lacking, although it is known that the organs occur almost along the entire trunk except for the anterior-most segments. Furthermore, although the nuchal organ ultrastructure is known to be comparatively uniform for many polychaete species, a comparative investigation has not been conducted in Orbiniidae. To bridge this data gap, we examined an intertidal population of the widely distributed species Scoloplos armiger. Although not completely identical, nuchal and dorsal organs show a high degree of correspondence in the examined specimens. Moreover, both organs correspond to the general structure of nuchal organs. They comprise ciliated supportive cells and bipolar receptor cells and are innervated directly from the brain. The supportive cells form subcuticular spaces and olfactory chambers apically protected by specialized microvilli that house the sensory processes—cilia and microvilli—of the monociliated receptor cells. Therefore, it can be concluded that nuchal and dorsal organs are also identical in Orbiniidae. However, despite general correspondence with spionids, convergent evolution in the two taxa appears to be the most parsimonious interpretation.
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Simon C, Kara J, du Toit A, van Rensburg H, Naidoo C, Matthee CA. Reeling them in: taxonomy of marine annelids used as bait by anglers in the Western Cape Province, South Africa. PeerJ 2021; 9:e11847. [PMID: 34484982 PMCID: PMC8381882 DOI: 10.7717/peerj.11847] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/09/2021] [Accepted: 07/01/2021] [Indexed: 11/24/2022] Open
Abstract
Background Common names are frequently used inconsistently for marine annelid species used as bait in the peer-reviewed literature, field guides and legislative material. The taxonomy of many such species based on morphology only also ignores cryptic divergences not yet detected. Such inconsistencies hamper effective management of marine annelids, especially as fishing for recreation and subsistence is increasing. This study investigates the scale of the problem by studying the use and names of bait marine annelids in the Western Cape Province of South Africa. Methods Fifteen recreational and six subsistence fishers at 12 popular fishing sites in the Western Cape Province donated 194 worms which they identified by common name. Worms were assigned scientific names according to a standard identification key for polychaetes from South Africa, and mitochondrial cytochrome oxidase I (COI) amplified and sequenced. Results This study identified 11 nominal species known by 10 common names, in the families Siphonosomatidae, Arenicolidae, Sabellaridae, Lumbrineridae, Eunicidae, Onuphidae and Nereididae. Cryptic diversity was investigated through employing mitochondrial COI sequences and these data will facilitate future identifications among widely distributed species. Several species (Siphonosoma dayi, Abarenicola gilchristi, Scoletoma species, Marphysa corallina, Lysidice natalensis, Heptaceras quinquedens, Perinereis latipalpa) are reported as bait for the first time, and while the names blood- and moonshineworms were consistently applied to members of Arenicolidae and Onuphidae, respectively, coralworm was applied to members of Sabellaridae and Nereididae. Analysis of COI sequences supported morphological investigations that revealed the presence of two taxonomic units each for specimens initially identified as Gunnarea gaimardi and Scoletoma tetraura according to identification keys. Similarly, sequences for Scoletoma species and Lysidice natalensis generated in this study do not match those from specimens in China and India, respectively. Further research is required to resolve the species complexes detected and also to refine the use of names by fishermen over a wider geographic range.
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Affiliation(s)
- Carol Simon
- Department of Botany and Zoology, University of Stellenbosch, Stellenbosch, Western Cape, South Africa
| | - Jyothi Kara
- Department of Botany and Zoology, University of Stellenbosch, Stellenbosch, Western Cape, South Africa.,Research and Exhibitions, Iziko Museums of South Africa, Cape Town, Western Cape, South Africa
| | - Alheit du Toit
- Department of Botany and Zoology, University of Stellenbosch, Stellenbosch, Western Cape, South Africa
| | - Hendré van Rensburg
- Department of Botany and Zoology, University of Stellenbosch, Stellenbosch, Western Cape, South Africa
| | - Caveshlin Naidoo
- Department of Botany and Zoology, University of Stellenbosch, Stellenbosch, Western Cape, South Africa
| | - Conrad A Matthee
- Department of Botany and Zoology, University of Stellenbosch, Stellenbosch, Western Cape, South Africa
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19
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Lee GH, Lee HE, Min GS. The complete mitochondrial genome of Boccardiella hamata (Annelida: Polychaeta: Spionida). Mitochondrial DNA B Resour 2021; 6:2646-2647. [PMID: 34409166 PMCID: PMC8366634 DOI: 10.1080/23802359.2021.1964395] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/02/2022] Open
Abstract
In this study, the complete mitogenome sequence of Korean Boccardiella hamata was determined. This is the first complete mitogenome in the order Spionida. The complete mitogenome of B. hamata is 17,561 bp in length with 12 protein-coding genes (atp8 gene absent), 23 transfer RNAs, 2 ribosomal RNAs, and 1 control region. Interestingly, the gene arrangement of the 12 PCGs of B. hamata is unique, which is very different from that of the other polychaetes currently known. The phylogenetic tree supported the traditional taxonomic position of Spionidae within subclass Sedentaria.
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Affiliation(s)
- Geon Hyeok Lee
- Department of Biological Sciences, Inha University, Incheon, Korea
| | - Ha-Eun Lee
- Department of Biological Sciences, Inha University, Incheon, Korea
| | - Gi-Sik Min
- Department of Biological Sciences, Inha University, Incheon, Korea
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20
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Costa DDA, Dolbeth M, Prata J, da Silva FDA, da Silva GMB, de Freitas PRS, Christoffersen ML, de Lima SFB, Massei K, de Lucena RFP. Marine invertebrates associated with rhodoliths/maërl beds from northeast Brazil (State of Paraíba). Biodivers Data J 2021; 9:e62736. [PMID: 34512095 PMCID: PMC8390885 DOI: 10.3897/bdj.9.e62736] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/03/2021] [Accepted: 05/27/2021] [Indexed: 11/29/2022] Open
Abstract
BACKGROUND This study investigates the marine macroinvertebrate fauna of rhodolith beds (non-geniculated red corallinaceaous algae) in northeast Brazilian. A total of 57 species were identified, belonging to six phyla (Platyhelminthes, Annelida, Sipuncula, Mollusca, Arthropoda and Echinodermata), of which 50 are considered here as new records for the Paraíba State. Annelids (Class Polychaeta) were the most representative taxa in Miramar and Seixas Beaches, while molluscs were dominant in Maceió Beach. NEW INFORMATION This is the first study that includes an identification key, diagnostic features and distribution patterns worldwide and local (including new records) of the marine invertebrate fauna associated with rhodolith beds in northeast Brazil (State of Paraíba). Sampling events were performed in 2018, at low tide in the intertidal to shallow subtidal zones (1.5 and 4.0 m depth), in Miramar, Seixas and Maceió Beaches. A total of 17 species were found for the first time on Seixas Beach, as well as all identified species for Miramar and Maceió. This study tries to contribute to the knowledge of marine invertebrates in northeast Brazilian shallow habitats, providing a baseline for future environmental studies.
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Affiliation(s)
- Dimítri de Araújo Costa
- CIIMAR - Interdisciplinary Centre of Marine and Environmental Research, Matosinhos, PortugalCIIMAR - Interdisciplinary Centre of Marine and Environmental ResearchMatosinhosPortugal
- UFPB - Federal University of Paraíba, DSE - Department of Systematics and Ecology, João Pessoa, BrazilUFPB - Federal University of Paraíba, DSE - Department of Systematics and EcologyJoão PessoaBrazil
- Sea Servin, Aquário Paraíba, João Pessoa, BrazilSea Servin, Aquário ParaíbaJoão PessoaBrazil
- InPact - Interinstitutional Relations of the Research and Action Institute, João Pessoa, BrazilInPact - Interinstitutional Relations of the Research and Action InstituteJoão PessoaBrazil
| | - Marina Dolbeth
- CIIMAR - Interdisciplinary Centre of Marine and Environmental Research, Matosinhos, PortugalCIIMAR - Interdisciplinary Centre of Marine and Environmental ResearchMatosinhosPortugal
| | - Jessica Prata
- UFPB - Federal University of Paraíba, DCB - Department of Biological Sciences, Areia, BrazilUFPB - Federal University of Paraíba, DCB - Department of Biological SciencesAreiaBrazil
| | - Francisco de Assis da Silva
- UFPB - Federal University of Paraíba, DSE - Department of Systematics and Ecology, João Pessoa, BrazilUFPB - Federal University of Paraíba, DSE - Department of Systematics and EcologyJoão PessoaBrazil
| | - Geuba Maria Bernardo da Silva
- UFPB - Federal University of Paraíba, DSE - Department of Systematics and Ecology, João Pessoa, BrazilUFPB - Federal University of Paraíba, DSE - Department of Systematics and EcologyJoão PessoaBrazil
| | - Paulo Ragner Silva de Freitas
- IFPI - Federal Institute of Education, Science and Technology of Piauí, Uruçuí, BrazilIFPI - Federal Institute of Education, Science and Technology of PiauíUruçuíBrazil
| | - Martin Lindsey Christoffersen
- UFPB - Federal University of Paraíba, DSE - Department of Systematics and Ecology, João Pessoa, BrazilUFPB - Federal University of Paraíba, DSE - Department of Systematics and EcologyJoão PessoaBrazil
| | - Silvio Felipe Barbosa de Lima
- UFPB - Federal University of Paraíba, DSE - Department of Systematics and Ecology, João Pessoa, BrazilUFPB - Federal University of Paraíba, DSE - Department of Systematics and EcologyJoão PessoaBrazil
- UFCG - Federal University of Campina Grande, CFP - Centro de Formação de Professores, UACEN - Unidade Acadêmica de Ciências Exatas e da Natureza, Cajazeiras, BrazilUFCG - Federal University of Campina Grande, CFP - Centro de Formação de Professores, UACEN - Unidade Acadêmica de Ciências Exatas e da NaturezaCajazeirasBrazil
| | - Karina Massei
- InPact - Interinstitutional Relations of the Research and Action Institute, João Pessoa, BrazilInPact - Interinstitutional Relations of the Research and Action InstituteJoão PessoaBrazil
| | - Reinaldo Farias Paiva de Lucena
- UFPB - Federal University of Paraíba, DSE - Department of Systematics and Ecology, João Pessoa, BrazilUFPB - Federal University of Paraíba, DSE - Department of Systematics and EcologyJoão PessoaBrazil
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Still Digging: Advances and Perspectives in the Study of the Diversity of Several Sedentarian Annelid Families. DIVERSITY 2021. [DOI: 10.3390/d13030132] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
Abstract
Sedentarian annelids are a diverse and heterogeneous group of marine worms representing more than 8600 species gathered in ca. 43 families. The attention brought to these organisms is unevenly distributed among these families, and the knowledge about them sometimes scarce. We review here the current knowledge about the families Acrocirridae, Cirratulidae (including Ctenodrilidae), Cossuridae, Longosomatidae, Paraonidae, and Sternaspidae in terms of biodiversity as well as the evolution of the taxonomy and systematics of each group. We present the challenges faced when studying these organisms and compare methodologies across groups and perspectives in future research.
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Abstract
Annelida is a ubiquitous, common and diverse group of organisms, found in terrestrial, fresh waters and marine environments. Despite the large efforts put into resolving the evolutionary relationships of these and other Lophotrochozoa, and the delineation of the basal nodes within the group, these are still unanswered. Annelida holds an enormous diversity of forms and biological strategies alongside a large number of species, following Arthropoda, Mollusca, Vertebrata and perhaps Platyhelminthes, among the species most rich in phyla within Metazoa. The number of currently accepted annelid species changes rapidly when taxonomic groups are revised due to synonymies and descriptions of a new species. The group is also experiencing a recent increase in species numbers as a consequence of the use of molecular taxonomy methods, which allows the delineation of the entities within species complexes. This review aims at succinctly reviewing the state-of-the-art of annelid diversity and summarizing the main systematic revisions carried out in the group. Moreover, it should be considered as the introduction to the papers that form this Special Issue on Systematics and Biodiversity of Annelids.
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On the Diversity of Phyllodocida (Annelida: Errantia), with a Focus on Glyceridae, Goniadidae, Nephtyidae, Polynoidae, Sphaerodoridae, Syllidae, and the Holoplanktonic Families. DIVERSITY-BASEL 2021. [DOI: 10.3390/d13030131] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Phyllodocida is a clade of errantiate annelids characterized by having ventral sensory palps, anterior enlarged cirri, axial muscular proboscis, compound chaetae (if present) with a single ligament, and of lacking dorsolateral folds. Members of most families date back to the Carboniferous, although the earliest fossil was dated from the Devonian. Phyllodocida holds 27 well-established and morphologically homogenous clades ranked as families, gathering more than 4600 currently accepted nominal species. Among them, Syllidae and Polynoidae are the most specious polychaete groups. Species of Phyllodocida are mainly found in the marine benthos, although a few inhabit freshwater, terrestrial and planktonic environments, and occur from intertidal to deep waters in all oceans. In this review, we (1) explore the current knowledge on species diversity trends (based on traditional species concept and molecular data), phylogeny, ecology, and geographic distribution for the whole group, (2) try to identify the main knowledge gaps, and (3) focus on selected families: Alciopidae, Goniadidae, Glyceridae, Iospilidae, Lopadorrhynchidae, Polynoidae, Pontodoridae, Nephtyidae, Sphaerodoridae, Syllidae, Tomopteridae, Typhloscolecidae, and Yndolaciidae. The highest species richness is concentrated in European, North American, and Australian continental shelves (reflecting a strong sampling bias). While most data come from shallow coastal and surface environments most world oceans are clearly under-studied. The overall trends indicate that new descriptions are constantly added through time and that less than 10% of the known species have molecular barcode information available.
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Cellular and molecular profiles of anterior nervous system regeneration in Diopatra claparedii Grube, 1878 (Annelida, Polychaeta). Heliyon 2021; 7:e06307. [PMID: 33681499 PMCID: PMC7930291 DOI: 10.1016/j.heliyon.2021.e06307] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2020] [Revised: 01/21/2021] [Accepted: 02/15/2021] [Indexed: 11/20/2022] Open
Abstract
The polychaete Diopatra claparedii Grube, 1878 is among those organisms successfully carrying out full body regeneration, including the whole nervous system. Thus, D. claparedii potentially can be regarded for the nervous system regeneration (NSR) study. However, data on the property of its nervous system and the NSR profile are still lacking. In this study, we investigated the morphology of D. claparedii anterior nervous system (ANS) and examined the cellular and molecular profiles on its early anterior NSR. The nervous system of D. claparedii consists of a symmetry brain with nerves branching off, circumpharyngeal connectives that connect the brain and nerve cord as well as obvious segmental ganglia. Moreover, we identified changes in the cellular condition of the ganglionic cells in the regenerating tissue, such as the accumulation of lysosomes and lipofuscins, elongated mitochondria and multiple nucleoli. Furthermore, mRNA of tissues at two regenerating stages, as well as intact tissue (non-regenerating), were sequenced with Illumina sequencer. We identified from these tissues 37,248 sequences, 18 differential expressed proteins of which upregulated were involved in NSR with noelin-like isoform X2 turned up to be the highest being expressed. Our results highlight the cellular and molecular changes during early phase of NSR, thus providing essential insights on regeneration within Annelida and understanding the neurodegenerative diseases.
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Gunton LM, Kupriyanova EK, Alvestad T, Avery L, Blake JA, Biriukova O, Böggemann M, Borisova P, Budaeva N, Burghardt I, Capa M, Georgieva MN, Glasby CJ, Hsueh PW, Hutchings P, Jimi N, Kongsrud JA, Langeneck J, Meißner K, Murray A, Nikolic M, Paxton H, Ramos D, Schulze A, Sobczyk R, Watson C, Wiklund H, Wilson RS, Zhadan A, Zhang J. Annelids of the eastern Australian abyss collected by the 2017 RV 'Investigator' voyage. Zookeys 2021; 1020:1-198. [PMID: 33708002 PMCID: PMC7930015 DOI: 10.3897/zookeys.1020.57921] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/28/2020] [Accepted: 12/01/2020] [Indexed: 01/18/2023] Open
Abstract
In Australia, the deep-water (bathyal and abyssal) benthic invertebrate fauna is poorly known in comparison with that of shallow (subtidal and shelf) habitats. Benthic fauna from the deep eastern Australian margin was sampled systematically for the first time during 2017 RV 'Investigator' voyage 'Sampling the Abyss'. Box core, Brenke sledge, and beam trawl samples were collected at one-degree intervals from Tasmania, 42°S, to southern Queensland, 24°S, from 900 to 4800 m depth. Annelids collected were identified by taxonomic experts on individual families around the world. A complete list of all identified species is presented, accompanied with brief morphological diagnoses, taxonomic remarks, and colour images. A total of more than 6000 annelid specimens consisting of 50 families (47 Polychaeta, one Echiura, two Sipuncula) and 214 species were recovered. Twenty-seven species were given valid names, 45 were assigned the qualifier cf., 87 the qualifier sp., and 55 species were considered new to science. Geographical ranges of 16 morphospecies extended along the eastern Australian margin to the Great Australian Bight, South Australia; however, these ranges need to be confirmed with genetic data. This work providing critical baseline biodiversity data on an important group of benthic invertebrates from a virtually unknown region of the world's ocean will act as a springboard for future taxonomic and biogeographic studies in the area.
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Affiliation(s)
| | - Elena K. Kupriyanova
- Australian Museum Research Institute, Sydney, Australia
- Macquarie University, Sydney, Australia
| | - Tom Alvestad
- Department of Natural History, University Museum of Bergen, University of Bergen, Bergen, Norway
| | | | - James A. Blake
- Aquatic Research & Consulting, Duxbury, Massachusetts, USA
| | - Olga Biriukova
- Museum and Art Gallery of the Northern Territory, Darwin, Australia
| | | | - Polina Borisova
- P.P. Shirshov Institute of Oceanology, Russian Academy of Sciences, Moscow, Russia
| | - Nataliya Budaeva
- Department of Natural History, University Museum of Bergen, University of Bergen, Bergen, Norway
- P.P. Shirshov Institute of Oceanology, Russian Academy of Sciences, Moscow, Russia
| | | | - Maria Capa
- Department of Biology, University of the Balearic Islands, Palma, Spain
| | | | | | - Pan-Wen Hsueh
- Department of Life Sciences, National Chung Hsing University, Taichung City, China
| | - Pat Hutchings
- Australian Museum Research Institute, Sydney, Australia
- Macquarie University, Sydney, Australia
| | - Naoto Jimi
- National Institute of Polar Research, Tachikawa, Tokyo, Japan
| | - Jon A. Kongsrud
- Department of Natural History, University Museum of Bergen, University of Bergen, Bergen, Norway
| | | | - Karin Meißner
- Forschungsinstitut Senckenberg, DZMB, Hamburg, Germany
| | - Anna Murray
- Australian Museum Research Institute, Sydney, Australia
| | | | - Hannelore Paxton
- Australian Museum Research Institute, Sydney, Australia
- Macquarie University, Sydney, Australia
| | | | - Anja Schulze
- Texas A&M University at Galveston, Galveston, TX, USA
| | - Robert Sobczyk
- Department of Zoology of Invertebrates and Hydrobiology, University of Lodz, Lodz, Poland
| | - Charlotte Watson
- Museum and Art Gallery of the Northern Territory, Darwin, Australia
| | - Helena Wiklund
- Natural History Museum, London, UK
- Gothenburg Global Biodiversity Centre and University of Gothenburg, Gothenburg, Sweden
| | | | - Anna Zhadan
- Biological Faculty, Lomonosov Moscow State University, Moscow, Russia
| | - Jinghuai Zhang
- South China Sea Environmental Monitoring Centre, State Oceanic Administration, Guangzhou, China
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Sun Y, Daffe G, Zhang Y, Pons J, Qiu JW, Kupriyanova EK. Another blow to the conserved gene order in Annelida: Evidence from mitochondrial genomes of the calcareous tubeworm genus Hydroides. Mol Phylogenet Evol 2021; 160:107124. [PMID: 33610649 DOI: 10.1016/j.ympev.2021.107124] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/21/2020] [Revised: 01/15/2021] [Accepted: 02/11/2021] [Indexed: 01/07/2023]
Abstract
Mitochondrial genomes are frequently applied in phylogenetic and evolutionary studies across metazoans, yet they are still poorly represented in many groups of invertebrates, including annelids. Here, we report ten mitochondrial genomes from the annelid genus Hydroides (Serpulidae) and compare them with all available annelid mitogenomes. We detected all 13 protein coding genes in Hydroides spp., including the atp8 which was reported as a missing gene in the Christmas Tree worm Spirobranchus giganteus, another annelid of the family Serpulidae. All available mitochondrial genomes of Hydroides show a highly positive GC skew combined with a highly negative AT skew - a feature consistent with that found only in the mitogenome of S. giganteus. In addition, amino acid sequences of the 13 protein-coding genes showed a high genetic distance between the Hydroides clade and S. giganteus, suggesting a fast rate of mitochondrial sequence evolution in Serpulidae. The gene order of protein-coding genes within Hydroides exhibited extensive rearrangements at species level, and were different from the arrangement patterns of other annelids, including S. giganteus. Phylogenetic analyses based on protein-coding genes recovered Hydroides as a monophyletic group sister to Spirobranchus with a long branch, and sister to the fan worm Sabellidae. Yet the Serpulidae + Sabellidae clade was unexpectedly grouped with Sipuncula, suggesting that mitochondrial genomes alone are insufficient to resolve the phylogenetic position of Serpulidae within Annelida due to its high base substitution rates. Overall, our study revealed a high variability in the gene order arrangement of mitochondrial genomes within Serpulidae, provided evidence to question the conserved pattern of the mitochondrial gene order in Annelida and called for caution when applying mitochondrial genes to infer their phylogenetic relationships.
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Affiliation(s)
- Yanan Sun
- Department of Biology and Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Hong Kong Baptist University, 224 Waterloo Road, Hong Kong; Australian Museum Research Institute, Australian Museum, 1 William Street, Sydney, NSW 2010, Australia
| | - Guillemine Daffe
- Australian Museum Research Institute, Australian Museum, 1 William Street, Sydney, NSW 2010, Australia; Universite de Bordeaux, CNRS, INRAE, La Rochelle Universite, UMS 2567 POREA, 33615 Pessac, France
| | - Yanjie Zhang
- Department of Biology and Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Hong Kong Baptist University, 224 Waterloo Road, Hong Kong
| | - Joan Pons
- Diversidad Animal y Microbiana, Instituto Mediterráneo de Estudios Avanzados IMEDEA (CSIC-UIB), Esporles, Balearic Islands, Spain
| | - Jian-Wen Qiu
- Department of Biology and Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou), Hong Kong Baptist University, 224 Waterloo Road, Hong Kong
| | - Elena K Kupriyanova
- Australian Museum Research Institute, Australian Museum, 1 William Street, Sydney, NSW 2010, Australia; Department of Biological Sciences, Macquarie University, Sydney, NSW 2109, Australia.
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Abstract
Members of the following marine annelid families are found almost exclusively in the interstitial environment and are highly adapted to move between sand grains, relying mostly on ciliary locomotion: Apharyngtidae n. fam., Dinophilidae, Diurodrilidae, Nerillidae, Lobatocerebridae, Parergodrilidae, Polygordiidae, Protodrilidae, Protodriloididae, Psammodrilidae and Saccocirridae. This article provides a review of the evolution, systematics, and diversity of these families, with the exception of Parergodrilidae, which was detailed in the review of Orbiniida by Meca, Zhadan, and Struck within this Special Issue. While several of the discussed families have previously only been known by a few described species, recent surveys inclusive of molecular approaches have increased the number of species, showing that all of the aforementioned families exhibit a high degree of cryptic diversity shadowed by a limited number of recognizable morphological traits. This is a challenge for studies of the evolution, taxonomy, and diversity of interstitial families as well as for their identification and incorporation into ecological surveys. By compiling a comprehensive and updated review on these interstitial families, we hope to promote new studies on their intriguing evolutionary histories, adapted life forms and high and hidden diversity.
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Abstract
Terebelliformia comprises a large group of sedentary polychaetes which live from the intertidal to the deep sea. The majority live in tubes and are selective deposit feeders. This study synthesises the current knowledge of this group, including their distribution, in the different biogeographic regions. We highlight the new methodologies being used to describe them and the resolution of species complexes occurring in the group. The main aim of this review is to highlight the knowledge gaps and to stimulate research in those directions, which will allow for knowledge of their distribution and abundances to be used by ecologists and managers.
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Abstract
Palaeoannelida Weigert and Bleidorn, 2016 is an old clade branching off at the base of the Annelida radiation. It includes two morphologically and ecological divergent groups of sedentary burrowers and tube-dwellers: Magelonidae Cunningham and Ramage, 1888, and Oweniidae Rioja, 1917. Magelonids are characterised by a flattened, shovel-shaped prostomium and a pair of ventral papillated palps. Oweniids have simplified bodies lacking parapodia or appendages and are easily distinguished by the presence of oval patches of packed uncini, each with two distal curved teeth. The present review aims to summarise available information about the diversity of forms and life strategies displayed in the group, providing some guidelines for species identification and the techniques commonly used for their study. In addition, the assumed geographic distributions of some taxa are critically discussed. A brief introduction about the evolutionary relationships, systematics, and taxonomic history is given for both Magelonidae and Oweniidae. The motivation of this review is to highlight the main knowledge gaps from a taxonomic, methodological, and geographic perspective, aiming at stimulating further research into members of this clade.
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The Early Branching Group of Orbiniida Sensu Struck et al., 2015: Parergodrilidae and Orbiniidae. DIVERSITY 2021. [DOI: 10.3390/d13010029] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]
Abstract
This review addresses the state of the art of the systematics and the improvements in the biology, ecology and species diversity of the two annelid taxa Parergodrilidae and Orbiniidae, the early branching group of Orbiniida sensu Struck et al., 2015 according to molecular studies. An effort to identify gaps of knowledge is given to understand the distribution, dispersal and the diversity Parergodrilidae and Orbiniidae hold, as well as to give several directions for future research. Parergodrilidae is a taxon of interstitial annelids constituted by the terrestrial Parergodrilus heideri (monotypic genus up to date), reported throughout Europe but also in Korea and North America, and the genus Stygocapitella, which includes eleven species from the upper shore of sandy beaches distributed along Europe and other regions of the world. Orbiniidae contains more than 200 described species spread over 20 valid genera, varying in size from a few millimeters up to 30 cm, distributed globally and living in a wide variety of soft bottoms. Improving the knowledge on these two sister-taxa is crucial for the understanding of the evolution to interstitial forms by progenesis in Annelida.
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Karaseva NP, Rimskaya-Korsakova NN, Ekimova IA, Gantsevich MM, Kokarev VN, Kremnyov SV, Simakov MI, Udalov AA, Vedenin AA, Malakhov VV. A new genus of frenulates (Annelida: Siboglinidae) from shallow waters of the Yenisey River estuary, Kara Sea. INVERTEBR SYST 2021. [DOI: 10.1071/is20075] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Only seven frenulate species are currently known along the Eurasian coast of the Arctic Ocean. We describe a new genus and a new species of frenulates Crispabrachia yenisey, gen. nov. et sp. nov. The morphological analysis involved standard anatomical techniques, semithin sections and scanning electron microscopy (SEM). The molecular study included four markers (partial COI, 16S, 18S and 28S) and implemented Bayesian and Maximum likelihood phylogenetic approaches. The description of Crispabrachia gen. nov. is the first documented finding of frenulates in the Kara Sea at the estuary of the Yenisey River in rather shallow water (28 m). The establishment of a new genus is warranted based on the composition of morphological characters and several specific features including free, comparatively short curly tentacles, a triangular cephalic lobe with amplate base, the valvate extension of the posterior part of the forepart and prominent papillae on the nonmetameric region. The tube structure with prominent frills and the worm’s numerous tentacles, metameric papillae with cuticular plaques and segmental furrow on the forepart indicate that the new genus belongs to the polybrachiid group. Although the type locality in the Yenisey River estuary is unusual for siboglinids in general, the physical conditions here are common for other frenulates habitats, i.e. salinity ~30–33, bottom water temperature –1.5°C. This finding was made in the Yenisey Gulf in the region with the highest methane concentrations in the southern part of the Kara Sea that reflects permafrost degradation under the influence of river flow. Further study of the region would help to understand the factors influencing frenulate distributions and improve our knowledge of their biodiversity.
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Tilic E, Sayyari E, Stiller J, Mirarab S, Rouse GW. More is needed—Thousands of loci are required to elucidate the relationships of the ‘flowers of the sea’ (Sabellida, Annelida). Mol Phylogenet Evol 2020; 151:106892. [DOI: 10.1016/j.ympev.2020.106892] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/04/2020] [Revised: 06/09/2020] [Accepted: 06/10/2020] [Indexed: 11/17/2022]
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Abstract
Abstract
A new genus of ectoparasitic marine annelids living on ctenophores, Ctenophoricola gen. nov., is described and its feeding behaviour, reproduction and developmental stages are discussed. Its unusual morphology challenged its placement within the known marine families. However, analyses of mitochondrial and nuclear sequence data showed the new genus as member of the Alciopini, a group of holopelagic annelids included within the Phyllodocidae. Ctenophoricola masanorii sp. nov. from Japan and Ctenophoricola rousei sp. nov. from the Canary Islands (Spain) are described. A third species from the Gulf of California is not formally described because the specimens are in poor condition. The new genus is characterized by having: 1) two distinctive body regions, the anterior with reduced parapodia lacking chaetae, and the posterior with long parapodia and chaetae and 2) a pair of large, elongate lensed eyes. These eyes are here described using histology and 3D reconstruction based on a Californian specimen. The two new species mainly differ in colour pattern, shape of parapodia, number of chaetae and body ciliation.
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Zamora JL, Parapar J, Helgason GV, Moreira J. Taxonomy and distribution of Icelandic Fauveliopsidae (Annelida) collected during the BIOICE project. J NAT HIST 2020. [DOI: 10.1080/00222933.2020.1757170] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/24/2022]
Affiliation(s)
- José Luis Zamora
- Departamento de Biología (Zoología), Universidad Autónoma de Madrid, Madrid, Spain
| | - Julio Parapar
- Departamento de Bioloxía Animal, Bioloxía Vexetal e Ecoloxía, Facultade de Ciencias, Universidade da Coruña, A Coruña, Spain
| | | | - Juan Moreira
- Departamento de Biología (Zoología), Universidad Autónoma de Madrid, Madrid, Spain
- Centro de Investigación en Biodiversidad y Cambio Global (CIBC-UAM), Universidad Autónoma de Madrid, Madrid, Spain
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Stiller J, Tilic E, Rousset V, Pleijel F, Rouse GW. Spaghetti to a Tree: A Robust Phylogeny for Terebelliformia (Annelida) Based on Transcriptomes, Molecular and Morphological Data. BIOLOGY 2020; 9:E73. [PMID: 32268525 PMCID: PMC7236012 DOI: 10.3390/biology9040073] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/14/2020] [Revised: 04/03/2020] [Accepted: 04/03/2020] [Indexed: 12/23/2022]
Abstract
Terebelliformia-"spaghetti worms" and their allies-are speciose and ubiquitous marine annelids but our understanding of how their morphological and ecological diversity evolved is hampered by an uncertain delineation of lineages and their phylogenetic relationships. Here, we analyzed transcriptomes of 20 terebelliforms and an outgroup to build a robust phylogeny of the main lineages grounded on 12,674 orthologous genes. We then supplemented this backbone phylogeny with a denser sampling of 121 species using five genes and 90 morphological characters to elucidate fine-scale relationships. The monophyly of six major taxa was supported: Pectinariidae, Ampharetinae, Alvinellidae, Trichobranchidae, Terebellidae and Melinninae. The latter, traditionally a subfamily of Ampharetidae, was unexpectedly the sister to Terebellidae, and hence becomes Melinnidae, and Ampharetinae becomes Ampharetidae. We found no support for the recently proposed separation of Telothelepodidae, Polycirridae and Thelepodidae from Terebellidae. Telothelepodidae was nested within Thelepodinae and is accordingly made its junior synonym. Terebellidae contained the subfamily-ranked taxa Terebellinae and Thelepodinae. The placement of the simplified Polycirridae within Terebellinae differed from previous hypotheses, warranting the division of Terebellinae into Lanicini, Procleini, Terebellini and Polycirrini. Ampharetidae (excluding Melinnidae) were well-supported as the sister group to Alvinellidae and we recognize three clades: Ampharetinae, Amaginae and Amphicteinae. Our analysis found several paraphyletic genera and undescribed species. Morphological transformations on the phylogeny supported the hypothesis of an ancestor that possessed both branchiae and chaetae, which is at odds with proposals of a "naked" ancestor. Our study demonstrates how a robust backbone phylogeny can be combined with dense taxon coverage and morphological traits to give insights into the evolutionary history and transformation of traits.
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Affiliation(s)
- Josefin Stiller
- Scripps Institution of Oceanography, University of California, San Diego, CA 92037, USA; (E.T.)
- Centre for Biodiversity Genomics, Department of Biology, University of Copenhagen, 2100 Copenhagen, Denmark
| | - Ekin Tilic
- Scripps Institution of Oceanography, University of California, San Diego, CA 92037, USA; (E.T.)
- Institute of Evolutionary Biology and Animal Ecology, University of Bonn, 53121 Bonn, Germany
| | - Vincent Rousset
- Scripps Institution of Oceanography, University of California, San Diego, CA 92037, USA; (E.T.)
| | - Fredrik Pleijel
- Tjärnö Marine Laboratory, Department of Marine Sciences, University of Gothenburg, 405 30 Gothenburg, Sweden;
| | - Greg W. Rouse
- Scripps Institution of Oceanography, University of California, San Diego, CA 92037, USA; (E.T.)
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Parry L, Caron JB. Canadia spinosa and the early evolution of the annelid nervous system. SCIENCE ADVANCES 2019; 5:eaax5858. [PMID: 31535028 PMCID: PMC6739095 DOI: 10.1126/sciadv.aax5858] [Citation(s) in RCA: 17] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2019] [Accepted: 08/09/2019] [Indexed: 05/19/2023]
Abstract
Annelid worms are a disparate, primitively segmented clade of bilaterians that first appear during the early Cambrian Period. Reconstructing their early evolution is complicated by the extreme morphological diversity in early diverging lineages, rapid diversification, and sparse fossil record. Canadia spinosa, a Burgess Shale fossil polychaete, is redescribed as having palps with feeding grooves, a dorsal median antenna and biramous parapodia associated with the head and flanking a ventral mouth. Carbonaceously preserved features are identified as a terminal brain, circumoral connectives, a midventral ganglionated nerve cord and prominent parapodial nerves. Phylogenetic analysis recovers neuroanatomically simple extant taxa as the sister group of other annelids, but the phylogenetic position of Canadia suggests that the annelid ancestor was reasonably complex neuroanatomically and that reduction of the nervous system occurred several times independently in the subsequent 500 million years of annelid evolution.
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Affiliation(s)
- Luke Parry
- Department of Natural History, Palaeobiology, Royal Ontario Museum, 100 Queen’s Park, Toronto, Ontario M5S 2C6, Canada
- Department of Geology and Geophysics, Yale University, New Haven, CT 06511, USA
- Corresponding author.
| | - Jean-Bernard Caron
- Department of Geology and Geophysics, Yale University, New Haven, CT 06511, USA
- Department of Ecology and Evolutionary Biology, University of Toronto, 25 Willcocks Street, Toronto, Ontario M5S 3B2, Canada
- Department of Earth Sciences, University of Toronto, Toronto, Ontario M5S 3B1, Canada
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Langeneck J, Barbieri M, Maltagliati F, Castelli A. Molecular phylogeny of Paraonidae (Annelida). Mol Phylogenet Evol 2019; 136:1-13. [PMID: 30936028 DOI: 10.1016/j.ympev.2019.03.023] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2018] [Revised: 03/23/2019] [Accepted: 03/28/2019] [Indexed: 11/27/2022]
Abstract
A molecular phylogeny of the family Paraonidae was reconstructed on the basis of 16S rDNA, COI and 18S rDNA sequences obtained from 66 individuals belonging to 38 nominal species and subspecies. In agreement with previous findings, Paraonidae represent a monophyletic group, closely related to Sternaspidae. The topology obtained by the Bayesian and Maximum Likelihood analyses on the combined dataset was not consistent with the traditional view on Paraonidae evolution, nor with a recent cladistic analysis. According to our results, Paraonidae are divided in five clades. The earliest branching clade (Clade I) included five species of the genera Cirrophorus and Paradoneis, whereas the remaining species of these genera were included in the Clade II. The genus Levinsenia is monophyletic and represents the sister group of a highly supported clade including some morphologically homogeneous species previously assigned to the genus Aricidea, which is here described as Blakeia n. gen. The remaining species of Aricidea clustered in a clade that included Paraonis as well. Paraonis can be interpreted as a pedomorphic form of Aricidea, accounting for the strong morphological divergence between the two genera. For priority rules, Aricidea should be considered a junior synonym of Paraonis. None of the subgenera traditionally recognised within Aricidea were monophyletic; in addition, the shallow molecular divergence identified among species, in particular for 18S rDNA sequences, suggests that the adaptive radiation of the genus Aricidea is relatively recent. Phylogenetic relationships suggested that the median antenna is an ancestral character, which has been independently lost several times, though a long, cirriform antenna only occurs in the genus Aricidea. The ancestral number of pre-branchial chaetigers is most likely three, even though arrangements with a higher number of chaetigers have been probably achieved at least twice independently. Notopodial modified chaetae appear to be a plesiomorphy of Paraonidae and they have been lost subsequently, whereas neuropodial modified chaetae have been acquired at least thrice independently through the evolutionary history of the family. Paraonidae show a strikingly high occurrence of cryptic and pseudocryptic species; results of the present work suggest that environmental features play a crucial role in the diversification of this family, whereas the influence of geographical distance appears less pronounced. Lastly, despite their importance in deep-water environments, Paraonidae probably are a primarily shallow-water family, that radiated in the deep sea secondarily.
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Affiliation(s)
- Joachim Langeneck
- Department of Biology, University of Pisa, via Derna 1, 56126 Pisa, Italy.
| | - Michele Barbieri
- Department of Biology, University of Pisa, via Derna 1, 56126 Pisa, Italy.
| | | | - Alberto Castelli
- Department of Biology, University of Pisa, via Derna 1, 56126 Pisa, Italy.
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Beckers P, Helm C, Purschke G, Worsaae K, Hutchings P, Bartolomaeus T. The central nervous system of Oweniidae (Annelida) and its implications for the structure of the ancestral annelid brain. Front Zool 2019; 16:6. [PMID: 30911320 PMCID: PMC6417257 DOI: 10.1186/s12983-019-0305-1] [Citation(s) in RCA: 24] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/26/2018] [Accepted: 02/26/2019] [Indexed: 11/29/2022] Open
Abstract
Background Recent phylogenomic analyses congruently reveal a basal clade which consists of Oweniidae and Mageloniidae as sister group to the remaining Annelida. These results indicate that the last common ancestor of Annelida was a tube-dwelling organism. They also challenge traditional evolutionary hypotheses of different organ systems, among them the nervous system. In textbooks the central nervous system is described as consisting of a ganglionic ventral nervous system and a dorsally located brain with different tracts that connect certain parts of the brain to each other. Only limited information on the fine structure, however, is available for Oweniidae, which constitute the sister group (possibly together with Magelonidae) to all remaining annelids. Results The brain of Oweniidae is ring- shaped and basiepidermal. Ganglia, higher brain centers or complex sensory organs do not exist; instead the central nervous system is medullary. Posterior to the brain the ventral medullary cord arises directly from the ventral region of the brain in Myriowenia sp. while in Owenia fusiformis two medullary cords arise perpendicular to the brain ring, extend caudally and fuse posterior. The central nervous system is composed of a central neuropil and surrounding somata of the neurons. According to ultrastructural and histological data only one type of neuron is present in the central nervous system. Conclusion The central nervous system of Oweniidae is the simplest in terms of enlargement of the dorsal part of the brain and neuron distribution found among Annelida. Our investigation suggests that neither ganglia nor commissures inside the brain neuropil or clusters of polymorphic neurons were present in the annelid stem species. These structures evolved later within Annelida, most likely in the stem lineage of Amphinomidae, Sipuncula and Pleistoannelida. Palps were supposedly present in the last common ancestor of annelids and innervated by two nerves originating in the dorsal part of the brain. A broader comparison with species of each major spiralian clade shows the medullary nervous system to be a common feature and thus possibly representing the ancestral state of the spiralian nervous system. Moreover, ganglia and clusters of polymorphic neurons seemingly evolved independently in the compared taxa of Spiralia and Annelida. Electronic supplementary material The online version of this article (10.1186/s12983-019-0305-1) contains supplementary material, which is available to authorized users.
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Affiliation(s)
- Patrick Beckers
- 1Institute of Evolutionary Biology, University of Bonn, 53121 Bonn, Germany
| | - Conrad Helm
- 2Johann-Friedrich-Blumenbach Institute for Zoology & Anthropology Animal Evolution and Biodiversity, University of Göttingen, 37073 Göttingen, Germany
| | - Günter Purschke
- 3Department of Developmental Biology and Zoology, University of Osnabrück, 49069 Osnabrück, Germany
| | - Katrine Worsaae
- 4Department of Biology, University of Copenhagen, 2100 Copenhagen, Denmark
| | - Pat Hutchings
- 5Australian Museum Research Institute, Australian Museum, Sydney, NSW 2010 Australia.,6Department of Biological Sciences, Macquarie University, North Ryde, 2109 Australia
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Martínez MJ, San Martín G. Serpúlidos (Annelida, Serpulidae) colectados en las campañas oceanográficas de Fauna Ibérica. GRAELLSIA 2019. [DOI: 10.3989/graellsia.2019.v75.224] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Abstract
Se han identificado las colecciones de poliquetos de la familia Serpulidae (Annelida) recolectados en las campañas oceanográficas de Fauna Ibérica, las cuales se encuentran depositadas en el Museo Nacional de Ciencias Naturales de Madrid (MNCN), en el marco del Proyecto Fauna Ibérica. Se estudiaron algo más de 100 muestras, que fueron recolectadas en el ámbito íbero-balear desde profundidades someras hasta más de 700 m de profundidad. Se han identificado un total de 24 especies pertenecientes a 15 géneros; se han observado algunas anomalías morfológicas, como por ejemplo características intermedias entre dos especies de Serpula o quimeras bioperculadas en Hydroides. También se ha profundizado en el estudio de los complejos de géneros Apomatus-Protula y Filograna-Salmacina.
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Starunov VV. The organization of musculature and the nervous system in the pygidial region of phyllodocid annelids. ZOOMORPHOLOGY 2019. [DOI: 10.1007/s00435-018-00430-4] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
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Rimskaya-Korsakova NN, Galkin SV, Malakhov VV. The neuroanatomy of the siboglinid Riftia pachyptila highlights sedentarian annelid nervous system evolution. PLoS One 2018; 13:e0198271. [PMID: 30543637 PMCID: PMC6292602 DOI: 10.1371/journal.pone.0198271] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/14/2018] [Accepted: 11/24/2018] [Indexed: 12/28/2022] Open
Abstract
Tracing the evolution of the siboglinid group, peculiar group of marine gutless annelids, requires the detailed study of the fragmentarily explored central nervous system of vestimentiferans and other siboglinids. 3D reconstructions of the neuroanatomy of Riftia revealed that the "brain" of adult vestimentiferans is a fusion product of the supraesophageal and subesophageal ganglia. The supraesophageal ganglion-like area contains the following neural structures that are homologous to the annelid elements: the peripheral perikarya of the brain lobes, two main transverse commissures, mushroom-like structures, commissural cell cluster, and the circumesophageal connectives with two roots which give rise to the palp neurites. Three pairs of giant perikarya are located in the supraesophageal ganglion, giving rise to the paired giant axons. The circumesophageal connectives run to the VNC. The subesophageal ganglion-like area contains a tripartite ventral aggregation of perikarya (= the postoral ganglion of the VNC) interconnected by the subenteral commissure. The paired VNC is intraepidermal, not ganglionated over most of its length, associated with the ciliary field, and comprises the giant axons. The pairs of VNC and the giant axons fuse posteriorly. Within siboglinids, the vestimentiferans are distinguished by a large and considerably differentiated brain. This reflects the derived development of the tentacle crown. The tentacles of vestimentiferans are homologous to the annelid palps based on their innervation from the dorsal and ventral roots of the circumesophageal connectives. Neuroanatomy of the vestimentiferan brains is close to the brains of Cirratuliiformia and Spionida/Sabellida, which have several transverse commissures, specific position of the giant somata (if any), and palp nerve roots (if any). The palps and palp neurite roots originally developed in all main annelid clades (basally branching, errantian and sedentarian annelids), show the greatest diversity in their number in sedentarian species. Over the course of evolution of Sedentaria, the number of palps and their nerve roots either dramatically increased (as in vestimentiferan siboglinids) or were lost.
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Affiliation(s)
| | - Sergey V. Galkin
- Laboratory of Ocean Benthic Fauna, Shirshov Institute of Oceanology of the Russian Academy of Science, Moscow, Russia
| | - Vladimir V. Malakhov
- Department of Invertebrate Zoology, Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia
- Far Eastern Federal University, Vladivostok, Russia
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Bonifácio P, Menot L. New genera and species from the Equatorial Pacific provide phylogenetic insights into deep-sea Polynoidae (Annelida). Zool J Linn Soc 2018. [DOI: 10.1093/zoolinnean/zly063] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/14/2022]
Affiliation(s)
- Paulo Bonifácio
- Ifremer, Centre Bretagne, REM EEP, Laboratoire Environnement Profond, ZI de la Pointe du Diable, Plouzané, France
| | - Lénaïck Menot
- Ifremer, Centre Bretagne, REM EEP, Laboratoire Environnement Profond, ZI de la Pointe du Diable, Plouzané, France
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Chartier TF, Deschamps J, Dürichen W, Jékely G, Arendt D. Whole-head recording of chemosensory activity in the marine annelid Platynereis dumerilii. Open Biol 2018; 8:180139. [PMID: 30381362 PMCID: PMC6223215 DOI: 10.1098/rsob.180139] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/14/2018] [Accepted: 10/08/2018] [Indexed: 01/13/2023] Open
Abstract
Chemical detection is key to various behaviours in both marine and terrestrial animals. Marine species, though highly diverse, have been underrepresented so far in studies on chemosensory systems, and our knowledge mostly concerns the detection of airborne cues. A broader comparative approach is therefore desirable. Marine annelid worms with their rich behavioural repertoire represent attractive models for chemosensation. Here, we study the marine worm Platynereis dumerilii to provide the first comprehensive investigation of head chemosensory organ physiology in an annelid. By combining microfluidics and calcium imaging, we record neuronal activity in the entire head of early juveniles upon chemical stimulation. We find that Platynereis uses four types of organs to detect stimuli such as alcohols, esters, amino acids and sugars. Antennae are the main chemosensory organs, compared to the more differentially responding nuchal organs or palps. We report chemically evoked activity in possible downstream brain regions including the mushroom bodies (MBs), which are anatomically and molecularly similar to insect MBs. We conclude that chemosensation is a major sensory modality for marine annelids and propose early Platynereis juveniles as a model to study annelid chemosensory systems.
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Affiliation(s)
- Thomas F Chartier
- Developmental Biology Unit, European Molecular Biology Laboratory, Meyerhofstraße 1, 69117 Heidelberg, Germany
| | - Joran Deschamps
- Cell Biology and Biophysics Unit, European Molecular Biology Laboratory, Meyerhofstraße 1, 69117 Heidelberg, Germany
| | - Wiebke Dürichen
- Developmental Biology Unit, European Molecular Biology Laboratory, Meyerhofstraße 1, 69117 Heidelberg, Germany
| | - Gáspár Jékely
- Living Systems Institute, University of Exeter, Stocker Road, Exeter EX4 4QD, UK
| | - Detlev Arendt
- Developmental Biology Unit, European Molecular Biology Laboratory, Meyerhofstraße 1, 69117 Heidelberg, Germany
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Tomioka S, Kakui K, Kajihara H. Molecular Phylogeny of the Family Capitellidae (Annelida). Zoolog Sci 2018; 35:436-445. [PMID: 30298787 DOI: 10.2108/zs180009] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Capitellids have emerged as monophyletic in most but not all recent molecular phylogenies, indicating that more extensive taxon sampling is necessary. In addition, monophyly of most or all capitellid genera was questionable, as some diagnostic characters vary ontogenetically within individuals. We tested the monophyly of Capitellidae and eight capitellid genera using phylogenetic analyses of combined 18S, 28S, H3, and COI gene sequences from 36 putative capitellid species. In our trees, Capitellidae formed a monophyletic sister group to Echiura, and Capitella was also monophyletic, separated by a long branch from other capitellids. Well-supported clades each containing representatives of different genera, or containing a subset of species within a genus, indicated that Barantolla, Heteromastus, and Notomastus are likely not monophyletic. We mapped three morphological characters traditionally used to define capitellid genera (head width relative to width of first segment, number of thoracic segments, and number of segments with capillary chaetae) onto our tree. While Capitella showed unique character states, states in the other genera were decidedly not phylogenetically informative. Morphology-based capitellid taxonomy will require a fine-scale reevaluation of character states and detection of new characters.
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Affiliation(s)
- Shinri Tomioka
- 1 Rishiri Town Museum, Senhoshi, Rishiri Is., Hokkaido 097-0311, Japan
| | - Keiichi Kakui
- 2 Department of Biological Sciences, Faculty of Science, Hokkaido University, N10 W8, Sapporo, Hokkaido 060-0810, Japan
| | - Hiroshi Kajihara
- 2 Department of Biological Sciences, Faculty of Science, Hokkaido University, N10 W8, Sapporo, Hokkaido 060-0810, Japan
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Kobayashi G, Goto R, Takano T, Kojima S. Molecular phylogeny of Maldanidae (Annelida): Multiple losses of tube-capping plates and evolutionary shifts in habitat depth. Mol Phylogenet Evol 2018; 127:332-344. [DOI: 10.1016/j.ympev.2018.04.036] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/24/2017] [Revised: 04/16/2018] [Accepted: 04/23/2018] [Indexed: 11/27/2022]
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Helm C, Beckers P, Bartolomaeus T, Drukewitz SH, Kourtesis I, Weigert A, Purschke G, Worsaae K, Struck TH, Bleidorn C. Convergent evolution of the ladder-like ventral nerve cord in Annelida. Front Zool 2018; 15:36. [PMID: 30275868 PMCID: PMC6161469 DOI: 10.1186/s12983-018-0280-y] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/20/2018] [Accepted: 09/04/2018] [Indexed: 12/15/2022] Open
Abstract
BACKGROUND A median, segmented, annelid nerve cord has repeatedly been compared to the arthropod and vertebrate nerve cords and became the most used textbook representation of the annelid nervous system. Recent phylogenomic analyses, however, challenge the hypothesis that a subepidermal rope-ladder-like ventral nerve cord (VNC) composed of a paired serial chain of ganglia and somata-free connectives represents either a plesiomorphic or a typical condition in annelids. RESULTS Using a comparative approach by combining phylogenomic analyses with morphological methods (immunohistochemistry and CLSM, histology and TEM), we compiled a comprehensive dataset to reconstruct the evolution of the annelid VNC. Our phylogenomic analyses generally support previous topologies. However, the so far hard-to-place Apistobranchidae and Psammodrilidae are now incorporated among the basally branching annelids with high support. Based on this topology we reconstruct an intraepidermal VNC as the ancestral state in Annelida. Thus, a subepidermal ladder-like nerve cord clearly represents a derived condition. CONCLUSIONS Based on the presented data, a ladder-like appearance of the ventral nerve cord evolved repeatedly, and independently of the transition from an intraepidermal to a subepidermal cord during annelid evolution. Our investigations thereby propose an alternative set of neuroanatomical characteristics for the last common ancestor of Annelida or perhaps even Spiralia.
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Affiliation(s)
- Conrad Helm
- Animal Evolution and Biodiversity, Georg-August-University Göttingen, 37073 Göttingen, Germany
| | - Patrick Beckers
- Institute of Evolutionary Biology and Ecology, University of Bonn, 53121 Bonn, Germany
| | - Thomas Bartolomaeus
- Institute of Evolutionary Biology and Ecology, University of Bonn, 53121 Bonn, Germany
| | | | - Ioannis Kourtesis
- Animal Evolution and Biodiversity, Georg-August-University Göttingen, 37073 Göttingen, Germany
| | - Anne Weigert
- Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, 04103 Leipzig, Germany
| | - Günter Purschke
- Department of Developmental Biology and Zoology, University of Osnabrück, 49069 Osnabrück, Germany
| | - Katrine Worsaae
- Department of Biology, University of Copenhagen, 2100 Copenhagen, Denmark
| | - Torsten H. Struck
- Frontiers in Evolutionary Zoology, Natural History Museum, University of Oslo, P.O. Box 1172, Blindern, NO-0318 Oslo, Norway
| | - Christoph Bleidorn
- Animal Evolution and Biodiversity, Georg-August-University Göttingen, 37073 Göttingen, Germany
- German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5e, 04103 Leipzig, Germany
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47
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Alexeeva N, Tamberg Y, Shunatova N. Postembryonic development of pycnogonids: A deeper look inside. ARTHROPOD STRUCTURE & DEVELOPMENT 2018. [PMID: 29524544 DOI: 10.1016/j.asd.2018.03.002] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/16/2023]
Abstract
Sea spiders form a small, enigmatic group of recent chelicerates, with an unusual bodyplan, oligosegmented larvae and a postembryonic development that is punctuated by many moults. To date, only a few papers examined the anatomical and ultrastructural modifications of the larvae and various instars. Here we traced both internal and external events of the whole postembryonic development in Nymphon brevirostre HODGE 1863 using histology, SEM, TEM and confocal microscopy. During postembryonic development, larvae of this species undergo massive reorganization: spinning apparatus and chelar glands disappear; larval legs redifferentiate; three new segments and the abdomen are formed with their corresponding internal organs and appendages; circulatory and reproductive systems develop anew and the digestive and the nervous systems change dramatically. The body cavity remains schizocoelic throughout development, and no traces of even transitory coeloms were found in any instar. In Nymphon brevirostre, just like in Artemia salina LINNAEUS 1758 the heart arises through differentiation of the already existing schizocoel, and thus the circulatory systems of arthropods and annelids are not homologous. We found that classical chelicerate tagmata, prosoma and opisthosoma, are inapplicable to adult pycnogonids, with the most striking difference being the fate and structure of the seventh appendage-bearing segment.
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Affiliation(s)
- Nina Alexeeva
- Department of Invertebrate Zoology, St. Petersburg State University, Universitetskaya nab. 7/9, St. Petersburg, 199034, Russian Federation.
| | - Yuta Tamberg
- Department of Marine Science, University of Otago, 310 Castle Street, Dunedin, 9016, New Zealand
| | - Natalia Shunatova
- Department of Invertebrate Zoology, St. Petersburg State University, Universitetskaya nab. 7/9, St. Petersburg, 199034, Russian Federation
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Zhang Y, Sun J, Rouse GW, Wiklund H, Pleijel F, Watanabe HK, Chen C, Qian PY, Qiu JW. Phylogeny, evolution and mitochondrial gene order rearrangement in scale worms (Aphroditiformia, Annelida). Mol Phylogenet Evol 2018; 125:220-231. [PMID: 29625228 DOI: 10.1016/j.ympev.2018.04.002] [Citation(s) in RCA: 47] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/18/2017] [Revised: 01/16/2018] [Accepted: 04/02/2018] [Indexed: 01/07/2023]
Abstract
Next-generation sequencing (NGS) has become a powerful tool in phylogenetic and evolutionary studies. Here we applied NGS to recover two ribosomal RNA genes (18S and 28S) from 16 species and 15 mitochondrial genomes from 16 species of scale worms representing six families in the suborder Aphroditiformia (Phyllodocida, Annelida), a complex group of polychaetes characterized by the presence of dorsal elytra or scales. The phylogenetic relationship of the several groups of scale worms remains unresolved due to insufficient taxon sampling and low resolution of individual gene markers. Phylogenetic tree topology based on mitochondrial genomes is comparable with that based on concatenated sequences from two mitochondrial genes (cox1 and 16S) and two ribosomal genes (18S and 28S) genes, but has higher statistical support for several clades. Our analyses show that Aphroditiformia is monophyletic, indicating the presence of elytra is an apomorphic trait. Eulepethidae and Aphroditidae together form the sister group to all other families in this suborder, whereas Acoetidae is sister to Iphionidae. Polynoidae is monophyletic, but within this family the deep-sea subfamilies Branchinotogluminae and Macellicephalinae are paraphyletic. Mitochondrial genomes in most scale-worm families have a conserved gene order, but within Polynoidae there are two novel arrangement patterns in the deep-sea clade. Mitochondrial protein-coding genes in polynoids as a whole have evolved under strong purifying selection, but substitution rates in deep-sea species are much higher than those in shallow-water species, indicating that purifying selection is relaxed in deep-sea polynoids. There are positive selected amino acids for some mitochondrial genes of the deep-sea clade, indicating they may involve in the adaption of deep-sea polynoids. Overall, our study (1) provided more evidence for reconstruction of the phylogeny of Aphroditiformia, (2) provided evidence to refute the assumption that mitochondrial gene order in Errantia is conserved, and (3) indicated that the deep-sea extreme environment may have affected the mitochondrial genome evolution rate and gene order arrangement in Polynoidae.
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Affiliation(s)
- Yanjie Zhang
- Department of Biology, Hong Kong Baptist University, 224 Waterloo Road, Hong Kong, China.
| | - Jin Sun
- Division of Life Science, The Hong Kong University of Science and Technology, Clear Water Bay Road, Hong Kong, China
| | - Greg W Rouse
- Scripps Institution of Oceanography, 9500 Gilman Drive, La Jolla, CA 92093, USA.
| | - Helena Wiklund
- Zoology Department, The Natural History Museum, Cromwell Road, London SW7 5BD, UK.
| | - Fredrik Pleijel
- Department of Marine Sciences, University of Gothenburg, Tjärnö, SE-452 96 Strömstad, Sweden.
| | - Hiromi K Watanabe
- Department of Marine Biodiversity Research, Japan Agency for Marine-Earth Science and Technology, 2-15 Natsushima-cho, Yokosuka, Kanagawa 237-0061, Japan.
| | - Chong Chen
- Department of Subsurface Geobiological Analysis and Research, Japan Agency for Marine-Earth Science and Technology, 2-15 Natsushima-cho, Yokosuka, Kanagawa 237-0061, Japan.
| | - Pei-Yuan Qian
- Division of Life Science, The Hong Kong University of Science and Technology, Clear Water Bay Road, Hong Kong, China.
| | - Jian-Wen Qiu
- Department of Biology, Hong Kong Baptist University, 224 Waterloo Road, Hong Kong, China.
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Rimskaya-Korsakova NN, Karaseva NP, Temereva EN, Malakhov VV. Protonephridial Excretory System in Vestimentifera (Siboglinidae, Annelida). DOKLADY BIOLOGICAL SCIENCES : PROCEEDINGS OF THE ACADEMY OF SCIENCES OF THE USSR, BIOLOGICAL SCIENCES SECTIONS 2018. [PMID: 29536402 DOI: 10.1134/s0012496618010064] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
Abstract
Ultrastructural study of the excretory tree of vestimentifera Ridgeia piscesae has shown that it consists of tubules that are blind at their distal ends. The tubules are lined with ciliated cells and have one or two multiciliated terminal cell(s) at the distal ends. In the tubule walls, there are putative ultrafiltration sites. The excretory tree tubules are interpreted as the secondary protonephridia.
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Affiliation(s)
| | | | | | - V V Malakhov
- Moscow State University, Moscow, Russia.,Far East Federal University, Vladivostok, Russia
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50
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Verdes A, Simpson D, Holford M. Are Fireworms Venomous? Evidence for the Convergent Evolution of Toxin Homologs in Three Species of Fireworms (Annelida, Amphinomidae). Genome Biol Evol 2018; 10:249-268. [PMID: 29293976 PMCID: PMC5778601 DOI: 10.1093/gbe/evx279] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/23/2017] [Indexed: 12/14/2022] Open
Abstract
Amphinomids, more commonly known as fireworms, are a basal lineage of marine annelids characterized by the presence of defensive dorsal calcareous chaetae, which break off upon contact. It has long been hypothesized that amphinomids are venomous and use the chaetae to inject a toxic substance. However, studies investigating fireworm venom from a morphological or molecular perspective are scarce and no venom gland has been identified to date, nor any toxin characterized at the molecular level. To investigate this question, we analyzed the transcriptomes of three species of fireworms-Eurythoe complanata, Hermodice carunculata, and Paramphinome jeffreysii-following a venomics approach to identify putative venom compounds. Our venomics pipeline involved de novo transcriptome assembly, open reading frame, and signal sequence prediction, followed by three different homology search strategies: BLAST, HMMER sequence, and HMMER domain. Following this pipeline, we identified 34 clusters of orthologous genes, representing 13 known toxin classes that have been repeatedly recruited into animal venoms. Specifically, the three species share a similar toxin profile with C-type lectins, peptidases, metalloproteinases, spider toxins, and CAP proteins found among the most highly expressed toxin homologs. Despite their great diversity, the putative toxins identified are predominantly involved in three major biological processes: hemostasis, inflammatory response, and allergic reactions, all of which are commonly disrupted after fireworm stings. Although the putative fireworm toxins identified here need to be further validated, our results strongly suggest that fireworms are venomous animals that use a complex mixture of toxins for defense against predators.
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Affiliation(s)
- Aida Verdes
- Department of Chemistry, Hunter College Belfer Research Center, and The Graduate Center, Program in Biology, Chemistry and Biochemistry, City University of New York
- Department of Invertebrate Zoology, Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York
- Departamento de Biología (Zoología), Facultad de Ciencias, Universidad Autónoma de Madrid, Spain
| | - Danny Simpson
- Department of Population Health, New York University School of Medicine
| | - Mandë Holford
- Department of Chemistry, Hunter College Belfer Research Center, and The Graduate Center, Program in Biology, Chemistry and Biochemistry, City University of New York
- Department of Invertebrate Zoology, Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York
- Department of Biochemistry, Weill Cornell Medical College, Cornell University
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