Effects of selective logging on bat communities in the southeastern Amazon

Vertical stratification patterns of tropical forest vertebrates: a meta-analysis

Tropical forests harbour the highest levels of terrestrial biodiversity and represent some of the most complex ecosystems on Earth, with a significant portion of this diversity above ground. Although the vertical dimension is a central aspect of the ecology of forest communities, there is little consensus as to prominence, evenness, and consistency of community-level stratification from ground to canopy. Here, we gather the results of 62 studies across the tropics to synthesise and assess broad patterns of vertical stratification of abundance and richness in vertebrates, the best studied taxonomic group for which results have not been collated previously. Our review of the literature yielded sufficient data for bats, small mammals, birds and amphibians. We show that variation in the stratification of abundance and richness exists within and among all taxa considered. Bat richness stratification was variable among studies, although bat abundance was weighted towards the canopy. Both bird richness and abundance stratification were variable, with no overriding pattern. On the contrary, both amphibians and small mammals showed consistent patterns of decline in abundance and richness towards the canopy. We descriptively characterise research trends in drivers of stratification cited or investigated within studies, finding local habitat structure and food distribution/foraging to be the most commonly attributed drivers. Further, we analyse the influence of macroecological variables on stratification patterns, finding latitude and elevation to be key predictors of bird stratification in particular. Prominent differences among taxa are likely due to taxon-specific interactions with local drivers such as vertical habitat structure, food distribution, and vertical climate gradients, which may vary considerably across macroecological gradients such as elevation and biogeographic realm. Our study showcases the complexity with which animal communities organise within tropical forest ecosystems, while demonstrating the canopy as a critical niche space for tropical vertebrates, thereby highlighting the inherent vulnerability of tropical vertebrate communities to forest loss and canopy disturbance. We recognise that analyses were constrained due to variation in study designs and methods which produced a variety of abundance and richness metrics recorded across different arrangements of vertical strata. We therefore suggest the application of best practices for data reporting and highlight the significant effort required to fill research gaps in terms of under-sampled regions, taxa, and environments.

Flying Over Amazonian Waters: The Role of Rivers on the Distribution and Endemism Patterns of Neotropical Bats

The Amazon comprises many of the largest rivers in the planet and also houses some of the richest bat communities in the world. Rivers are important geographic barriers for the dispersal and distribution of different taxa worldwide and, particularly in the Amazon region, they form the conceptual and empirical bases for the recognition of the so-called Areas of Endemism of terrestrial vertebrates. Despite the vast literature on the role of rivers on vertebrate community structure in the Amazon Forest, this process has never been investigated using a comprehensive dataset of Neotropical bat communities in the region. In this study, we aimed at: (1) evaluating the patterns of bat endemism across the Amazon Forest; (2) testing for the relationship between the distribution of bat species in the Amazon and the interfluve Areas of Endemism as currently recognized, and; (3) analyzing the importance of major Amazonian rivers in bat beta-diversity (turnover and nestedness) in the Amazon. Our results indicate that rivers are not major barriers for the current distribution of most bat species, and bat community composition breaks were divided into two clusters separating the east and west regions, and a third cluster in northern Amazon. In addition, there was no significant overlap among species distribution limits and the interfluve Areas of Endemism. Interestingly, the geographic patterns that we found for bat communities composition breaks highly resembles the one recovered using bird communities, suggesting that similar ecological and historical drivers might be acting to determine the distribution of flying vertebrates in the Amazon. Moreover, Amazonian bat distribution and endemism patterns were likely shaped by factors other than rivers, such as species interactions and the current environmental conditions. In conclusion, our results highlight the importance of modern analytical approaches to investigate large scale ecological patterns in the Neotropical region, and also challenge the widely recognized role of rivers on the determination of community structure and endemism patterns in the Amazon Forest, at least for bats.

Altered structure of bat-prey interaction networks in logged tropical forests revealed by metabarcoding

Habitat degradation is pervasive across the tropics and is particularly acute in Southeast Asia, with major implications for biodiversity. Much research has addressed the impact of degradation on species diversity; however, little is known about how ecological interactions are altered, including those that constitute important ecosystem functions such as consumption of herbivores. To examine how rainforest degradation alters trophic interaction networks, we applied DNA metabarcoding to construct interaction networks linking forest-dwelling insectivorous bat species and their prey, comparing old-growth forest and forest degraded by logging in Sabah, Borneo. Individual bats in logged rainforest consumed a lower richness of prey than those in old-growth forest. As a result, interaction networks in logged forests had a less nested structure. These network structures were associated with reduced network redundancy and thus increased vulnerability to perturbations in logged forests. Our results show how ecological interactions change between old-growth and logged forests, with potentially negative implications for ecosystem function and network stability.

New record of Alectopsylla unisetosa (Siphonaptera: Ischnopsyllidae) from Patagonia

Alectopsylla unisetosa (Ischnopsyllidae) from Santa Cruz province represents the second report of the species after 45 years. This new distributional record extends this species distribution 1350 km further south than previously documented. Moreover, Alectopsylla unisetosa infesting Myotis chiloensis constitutes a new flea-host association. This finding provides new insights into the biogeography and host associations within the family Ischnopsyllidae.

The Inquiry Cycle and Applied Inquiry Cycle: Integrated Frameworks for Field Studies in the Environmental Sciences

Empirical place-based studies remain the research mode of most environmental field scientists. For their own sake and that of synthetic analyses based on them, such studies should follow rigorous, integrated frameworks for formulating, designing, executing, analyzing, interpreting, and reporting investigations. The inquiry cycle and applied inquiry cycle provide such frameworks: research questions complying with strict guidelines, research design following 17 detailed steps, and ordered sequences of reflections on data that begin with possible causes of their general tendencies and exceptions (outliers) and then consider possibilities involving other spatiotemporal scales. The applied inquiry cycle evaluates alternative place-based management guidelines. In these studies, reflection on results can lead to implementing the most promising alternative examined, monitoring the consequences, and engaging in adaptive management. The integration from start to finish and the numerous reality checks of the two frameworks provide field researchers with tools to carry out the best, or least flawed, field investigations possible.

Fleas of mammals and patterns of distributional congruence in northwestern Argentina: A preliminary biogeographic analysis

In few groups of parasites have the patterns of distribution been studied using quantitative methods, even though, the study of these organisms indirectly provides information on the biogeographic history of their hosts, and in turn, the history of the hosts allows elucidation of speciation events of the parasites. Our objective was to quantitatively identify distributional congruence patterns of native fleas in northwestern Argentina. We analyzed 159 georeferenced distributional records of 47 species and six subspecies of fleas in northwestern Argentina using NDM/VNDM software. We found eight consensus areas, defined by 17 species and two subspecies, included in six patterns of distributional congruence (PDCs) with endemic and non-endemic fleas. The PDCs with the greatest values of endemicity (E) were mainly associated with Monte and Yungas Forests areas. All patterns indicated strong tendency of the Yungas Forests as a possible endemism area. Our results indicate that distributional congruence centers are generally located in Yungas Forests areas and highlight the importance of these areas in conservation and historical biology. This new information will allow delimitation of areas in the region at a more detailed resolution in the future.

Composition and diversity of bat assemblages at Arabuko-Sokoke Forest and the adjacent farmlands, Kenya

Recognized as a global biodiversity hotspot, coastal forests in eastern Africa are currently reduced to fragments amidst human modified habitats. Managing for biodiversity depends on our understanding of how many and which species can persist in these modified areas. Aiming at clarifying how habitat structure changes affect bat assemblage composition and richness, we used ground-level mist nets at Arabuko-Sokoke Forest (ASF) and adjacent farmlands. Habitat structure was assessed using the point-centered quarter (PCQ) method at 210 points per habitat. We captured a total of 24 bat species (ASF: 19, farmlands: 23) and 5217 individuals (ASF: 19.1%, farmlands: 82.9%). Bat diversity was higher at ASF (H′, ASF: 1.48 ± 0.2, farm: 1.33 ± 0.1), but bat richness and abundance were higher in farmlands [Chao1, ASF: 19 (19–25), farmlands: 24 (24–32) species (95% confidence interval [CI])]. Understory vegetation and canopy cover were highest at ASF and the lower bat richness and abundance observed may be the result of the under-sampling of many clutter tolerant and high flying species. Future surveys should combine different methods of capture and acoustic surveys to comprehensively sample bats at ASF. Nonetheless, the rich bat assemblages observed in farmlands around ASF should be valued and landowners encouraged to maintain orchards on their farms.

Effects of Forest Fragmentation on the Vertical Stratification of Neotropical Bats

Vertical stratification is a key component of the biological complexity of rainforests. Understanding community- and species-level responses to disturbance across forest strata is paramount for evidence-based conservation and management. However, even for bats, known to extensively explore multiple layers of the complex three-dimensional forest space, studies are biased towards understory-based surveys and only few assessments of vertical stratification were done in fragmented landscapes. Using both ground and canopy mist-nets, we investigated how the vertical structure of bat assemblages is influenced by forest fragmentation in the experimentally fragmented landscape of the Biological Dynamics of Forest Fragments Project, Central Amazon, Brazil. Over a three year-period, we captured 3077 individuals of 46 species in continuous forest (CF) and in 1, 10 and 100 ha forest fragments. In both CF and forest fragments, the upper forest strata sustained more diverse bat assemblages than the equivalent understory layer, and the midstory layers had significantly higher bat abundance in fragments than in CF. Artibeus lituratus and Rhinophylla pumilio exhibited significant shifts in their vertical stratification patterns between CF and fragments (e.g., R. pumilio was more associated with the upper strata in fragments than in CF). Altogether, our study suggests that fragmentation modulates the vertical stratification of bat assemblages.

Bat assemblages of protected areas in the state of Rio de Janeiro, Brazil

ABSTRACT We analyzed the bat assemblages found in protected areas in the state of Rio de Janeiro, Brazil, which is the best-sampled region of the Atlantic Forest. We selected 24 strict nature reserves and nine sustainable-use protected areas. We used data from inventories and complemented with data from the literature. We compared strict and sustainable-use protected areas, and tested whether the bat assemblages varied between habitat types. We tested the effect of geographic distance on the dissimilarity between bat assemblages, as well as the relationship between species composition and the size, mean altitude of the protected area, and capture effort. We compiled a total of 34,443 capture records, involving 67 species. Three species were captured only once, which raises cause for concern. Bat assemblages did not vary between protected area categories, but did vary among habitats with less than 1,000 captures. Assemblages were more similar to one another in geographically proximate areas. The size of the protected area and capture effort did not affect the composition of the bat assemblages, but altitude did influence this parameter. The Atlantic Forest is a priority biome for research and conservation, and reliable data on species distributions are essential for the development of conservation strategies.

The importance of grassland patches and their associated rainforest ecotones to insectivorous bats in a fire-managed tropical landscape

Abstract ContextEcotones are recognised globally as areas of high biodiversity, yet relatively little is known about how fauna use different types of ecotone. Tropical rainforest–grassland ecotones are shaped through particular fire regimes, creating both gradual and abrupt ecotones. Insectivorous bats contribute considerably to mammalian diversity, and their capacity for flight allows them to use ecotones in a three-dimensional way, making them an informative faunal group for evaluating ecotone use. AimsTo critically evaluate how insectivorous bats use gradual and abrupt ecotones between rainforest and grassland habitats. MethodsBat detectors were placed every 50m, along 200-m transects, through five gradual and five abrupt rainforest–grassland ecotones. The activity of all insectivorous bats, as well as open, edge–open and closed foraging guilds (defined by echolocation call type), was compared among grassland and rainforest habitats, gradual and abrupt ecotones and positions across the ecotones. Key resultsMean total bat activity, mean open and edge–open foraging guild activity were significantly higher in grassland positions, followed by the edge, and were lowest in the rainforest. Closed foraging guild bats showed no preference for either habitats, but had significantly higher activity in gradual compared with abrupt ecotones. Mean activity of edge–open foraging guild bats was affected strongly by the interaction between ecotone type and position along the ecotone. Gradual ecotones had a more even proportion of all three bat foraging guilds along the ecotone compared with abrupt ecotones. Most of these findings were likely driven by the structural complexity of gradual ecotones that fulfilled microhabitat requirements for all three foraging guilds, but may also have been influenced by insect prey abundance. ConclusionsThe present study demonstrated the importance of grassland patches in a tropical, rainforest landscape, and of gradual rainforest–grassland ecotones for insectivorous bats. Gradual ecotones promote complex habitat mosaics to allow closed foraging guild species to take advantage of food resources provided by grasslands, and provide all bats proximity to potential roosting and foraging sites. ImplicationsThe data clearly suggest that a suitable fire regime should be used to maintain current grassland patches within a rainforest landscape, and to promote gradual ecotones for use by insectivorous bats.

Enhancing sampling design in mist-net bat surveys by accounting for sample size optimization

The advantages of mist-netting, the main technique used in Neotropical bat community studies to date, include logistical implementation, standardization and sampling representativeness. Nonetheless, study designs still have to deal with issues of detectability related to how different species behave and use the environment. Yet there is considerable sampling heterogeneity across available studies in the literature. Here, we approach the problem of sample size optimization. We evaluated the common sense hypothesis that the first six hours comprise the period of peak night activity for several species, thereby resulting in a representative sample for the whole night. To this end, we combined re-sampling techniques, species accumulation curves, threshold analysis, and community concordance of species compositional data, and applied them to datasets of three different Neotropical biomes (Amazonia, Atlantic Forest and Cerrado). We show that the strategy of restricting sampling to only six hours of the night frequently results in incomplete sampling representation of the entire bat community investigated. From a quantitative standpoint, results corroborated the existence of a major Sample Area effect in all datasets, although for the Amazonia dataset the six-hour strategy was significantly less species-rich after extrapolation, and for the Cerrado dataset it was more efficient. From the qualitative standpoint, however, results demonstrated that, for all three datasets, the identity of species that are effectively sampled will be inherently impacted by choices of sub-sampling schedule. We also propose an alternative six-hour sampling strategy (at the beginning and the end of a sample night) which performed better when resampling Amazonian and Atlantic Forest datasets on bat assemblages. Given the observed magnitude of our results, we propose that sample representativeness has to be carefully weighed against study objectives, and recommend that the trade-off between logistical constraints and additional sampling performance should be carefully evaluated.

Managing coniferous production forests towards bat conservation

Context Forest management has impacts on bats worldwide. Given that many forest bats are threatened and that bats are important providers of ecosystem services, understanding the effects of forest management practices on their activity is fundamental for the implementation of conservation measures. Despite these important issues, studies on the effects of management practices on bats are scarce. Aims To propose management measures for coniferous production forests, to ensure sustainability of bat populations. Methods We evaluated bat species richness and activity during gestation, lactation and mating/swarming/dispersion seasons in differently managed pine stands to evaluate how vegetation structure influences those variables. Bat activity was surveyed using acoustic monitoring in 28 sampling plots within stands with distinct management records in Portugal. We also sampled arthropods using light traps to ascertain how prey availability influenced bat species richness and activity in those plots. Key results Bat species richness and activity varied along the three phenological seasons and were higher in autumn, when mating, swarming and dispersion from nurseries to hibernacula took place. Prey availability varied, but was higher during the lactation season. We hypothesise that the lower levels of bat species richness and activity registered during that period were due to a reduced availability of roosts, rather than food scarcity. Species richness was positively correlated with canopy cover and prey taxa richness, and negatively associated with dry branches cover. Total bat activity was positively correlated with tree height and prey taxa richness, and negatively associated with dry branches cover. The activity of edge-space foragers was positively associated with average tree height and prey taxa richness, while the activity of open-space foragers was negatively associated with dry branches cover. Conclusions Coniferous production forests are of great importance for bats during the mating/swarming/dispersion season. Canopy cover, dry branches cover, tree height and prey taxa richness influence bat species richness and activity as a whole, particularly the activity of open- and edge- foraging guilds. Implications Based on our results, two straightforward management actions should be implemented in coniferous production forests to increase their value for bat assemblages: the maintenance of old coniferous stands, and the cutting of dry branches at the subcanopy level.

Defaunation affects carbon storage in tropical forests

Carbon storage is widely acknowledged as one of the most valuable forest ecosystem services. Deforestation, logging, fragmentation, fire, and climate change have significant effects on tropical carbon stocks; however, an elusive and yet undetected decrease in carbon storage may be due to defaunation of large seed dispersers. Many large tropical trees with sizeable contributions to carbon stock rely on large vertebrates for seed dispersal and regeneration, however many of these frugivores are threatened by hunting, illegal trade, and habitat loss. We used a large data set on tree species composition and abundance, seed, fruit, and carbon-related traits, and plant-animal interactions to estimate the loss of carbon storage capacity of tropical forests in defaunated scenarios. By simulating the local extinction of trees that depend on large frugivores in 31 Atlantic Forest communities, we found that defaunation has the potential to significantly erode carbon storage even when only a small proportion of large-seeded trees are extirpated. Although intergovernmental policies to reduce carbon emissions and reforestation programs have been mostly focused on deforestation, our results demonstrate that defaunation, and the loss of key ecological interactions, also poses a serious risk for the maintenance of tropical forest carbon storage.

Responses of Tropical Bats to Habitat Fragmentation, Logging, and Deforestation

Land-use change is a key driver of the global biodiversity crisis and a particularly serious threat to tropical biodiversity. Throughout the tropics, the staggering pace of deforestation, logging, and conversion of forested habitat to other land uses has created highly fragmented landscapes that are increasingly dominated by human-modified habitats and degraded forests. In this chapter, we review the responses of tropical bats to a range of land-use change scenarios, focusing on the effects of habitat fragmentation, logging, and conversion of tropical forest to various forms of agricultural production. Recent landscape-scale studies have considerably advanced our understanding of how tropical bats respond to habitat fragmentation and disturbance at the population, ensemble, and assemblage level. This research emphasizes that responses of bats are often species and ensemble specific, sensitive to spatial scale, and strongly molded by the characteristics of the prevailing landscape matrix. Nonetheless, substantial knowledge gaps exist concerning other types of response by bats. Few studies have assessed responses at the genetic, behavioral, or physiological level, with regard to disease prevalence, or the extent to which human disturbance erodes the capacity of tropical bats to provide key ecosystem services. A strong geographic bias, with Asia and, most notably, Africa, being strongly understudied, precludes a comprehensive understanding of the effects of fragmentation and disturbance on tropical bats. We strongly encourage increased research in the Paleotropics and emphasize the need for long-term studies, approaches designed to integrate multiple scales, and answering questions that are key to conserving tropical bats in an era of environmental change and dominance of modified habitats (i.e., the Anthropocene).

Ground-Vegetation Clutter Affects Phyllostomid Bat Assemblage Structure in Lowland Amazonian Forest

Vegetation clutter is a limiting factor for bats that forage near ground level, and may determine the distribution of species and guilds. However, many studies that evaluated the effects of vegetation clutter on bats have used qualitative descriptions rather than direct measurements of vegetation density. Moreover, few studies have evaluated the effect of vegetation clutter on a regional scale. Here, we evaluate the influence of the physical obstruction of vegetation on phyllostomid-bat assemblages along a 520 km transect in continuous Amazonian forest. We sampled bats using mist nets in eight localities during 80 nights (3840 net-hours) and estimated the ground-vegetation density with digital photographs. The total number of species, number of animalivorous species, total number of frugivorous species, number of understory frugivorous species, and abundance of canopy frugivorous bats were negatively associated with vegetation clutter. The bat assemblages showed a nested structure in relation to degree of clutter, with animalivorous and understory frugivorous bats distributed throughout the vegetation-clutter gradient, while canopy frugivores were restricted to sites with more open vegetation. The species distribution along the gradient of vegetation clutter was not closely associated with wing morphology, but aspect ratio and wing load differed between frugivores and animalivores. Vegetation structure plays an important role in structuring assemblages of the bats at the regional scale by increasing beta diversity between sites. Differences in foraging strategy and diet of the guilds seem to have contributed more to the spatial distribution of bats than the wing characteristics of the species alone.

Reconciling timber extraction with biodiversity conservation in tropical forests using reduced-impact logging

Over 20% of the world's tropical forests have been selectively logged, and large expanses are allocated for future timber extraction. Reduced‐impact logging (RIL) is being promoted as best practice forestry that increases sustainability and lowers CO₂ emissions from logging, by reducing collateral damage associated with timber extraction. RIL is also expected to minimize the impacts of selective logging on biodiversity, although this is yet to be thoroughly tested.

We undertake the most comprehensive study to date to investigate the biodiversity impacts of RIL across multiple taxonomic groups. We quantified birds, bats and large mammal assemblage structures, using a before‐after control‐impact (BACI) design across 20 sample sites over a 5‐year period. Faunal surveys utilized point counts, mist nets and line transects and yielded >250 species. We examined assemblage responses to logging, as well as partitions of feeding guild and strata (understorey vs. canopy), and then tested for relationships with logging intensity to assess the primary determinants of community composition.

Community analysis revealed little effect of RIL on overall assemblages, as structure and composition were similar before and after logging, and between logging and control sites. Variation in bird assemblages was explained by natural rates of change over time, and not logging intensity. However, when partitioned by feeding guild and strata, the frugivorous and canopy bird ensembles changed as a result of RIL, although the latter was also associated with change over time. Bats exhibited variable changes post‐logging that were not related to logging, whereas large mammals showed no change at all.

Indicator species analysis and correlations with logging intensities revealed that some species exhibited idiosyncratic responses to RIL, whilst abundance change of most others was associated with time.

Synthesis and applications. Our study demonstrates the relatively benign effect of reduced‐impact logging (RIL) on birds, bats and large mammals in a neotropical forest context, and therefore, we propose that forest managers should improve timber extraction techniques more widely. If RIL is extensively adopted, forestry concessions could represent sizeable and important additions to the global conservation estate – over 4 million km².

Our study demonstrates the relatively benign effect of reduced‐impact logging (RIL) on birds, bats and large mammals in a neotropical forest context, and therefore, we propose that forest managers should improve timber extraction techniques more widely. If RIL is extensively adopted, forestry concessions could represent sizeable and important additions to the global conservation estate – over 4 million km².

The omnivorous collared peccary negates an insectivore-generated trophic cascade in Costa Rican wet tropical forest understorey

Insectivorous birds and bats often protect plants through density- and trait-mediated cascades, but the degree to which insectivores reduce herbivorous arthropods and leaf damage varies among systems. Top-down interaction strength may be influenced by the biotic and abiotic context, including the presence of vegetation-disturbing animals. We tested two hypotheses: (1) insectivorous birds and bats initiate trophic cascades in tropical rain-forest understorey; and (2) the native, omnivorous collared peccary (Pecari tajacu) negates these cascades via non-trophic effects. We studied the top-down effects of birds and bats on understorey plants in north-eastern Costa Rica using 60 netted exclosures within and outside existing peccary exclosures. Excluding birds and bats increased total arthropod densities by half, both with and without peccaries. Bird/bat exclosures increased Diptera density by 28% and leaf damage by 24% without peccaries, consistent with a trophic cascade. However, bird/bat exclosures decreased Diptera density by 32% and leaf damage by 34% with peccaries, a negation of the trophic cascade. Excluding peccaries increased leaf damage by 43% on plants without birds and bats. This is the first study, to our knowledge, to demonstrate that the non-trophic activity of an omnivorous ungulate can reverse a trophic cascade.

Trophic flexibility and the persistence of understory birds in intensively logged rainforest

Effects of logging on species composition in tropical rainforests are well known but may fail to reveal key changes in species interactions. We used nitrogen stable-isotope analysis of 73 species of understory birds to quantify trophic responses to repeated intensive logging of rainforest in northern Borneo and to test 4 hypotheses: logging has significant effects on trophic positions and trophic-niche widths of species, and the persistence of species in degraded forest is related to their trophic positions and trophic-niche widths in primary forest. Species fed from higher up the food chain and had narrower trophic-niche widths in degraded forest. Species with narrow trophic-niche widths in primary forest were less likely to persist after logging, a result that indicates a higher vulnerability of dietary specialists to local extinction following habitat disturbance. Persistence of species in degraded forest was not related to a species' trophic position. These results indicate changes in trophic organization that were not apparent from changes in species composition and highlight the importance of focusing on trophic flexibility over the prevailing emphasis on membership of static feeding guilds. Our results thus support the notion that alterations to trophic organization and interactions within tropical forests may be a pervasive and functionally important hidden effect of forest degradation.

Impacts of intensive logging on the trophic organisation of ant communities in a biodiversity hotspot

Trophic organisation defines the flow of energy through ecosystems and is a key component of community structure. Widespread and intensifying anthropogenic disturbance threatens to disrupt trophic organisation by altering species composition and relative abundances and by driving shifts in the trophic ecology of species that persist in disturbed ecosystems. We examined how intensive disturbance caused by selective logging affects trophic organisation in the biodiversity hotspot of Sabah, Borneo. Using stable nitrogen isotopes, we quantified the positions in the food web of 159 leaf-litter ant species in unlogged and logged rainforest and tested four predictions: (i) there is a negative relationship between the trophic position of a species in unlogged forest and its change in abundance following logging, (ii) the trophic positions of species are altered by logging, (iii) disturbance alters the frequency distribution of trophic positions within the ant assemblage, and (iv) disturbance reduces food chain length. We found that ant abundance was 30% lower in logged forest than in unlogged forest but changes in abundance of individual species were not related to trophic position, providing no support for prediction (i). However, trophic positions of individual species were significantly higher in logged forest, supporting prediction (ii). Consequently, the frequency distribution of trophic positions differed significantly between unlogged and logged forest, supporting prediction (iii), and food chains were 0.2 trophic levels longer in logged forest, the opposite of prediction (iv). Our results demonstrate that disturbance can alter trophic organisation even without trophically-biased changes in community composition. Nonetheless, the absence of any reduction in food chain length in logged forest suggests that species-rich arthropod food webs do not experience trophic downgrading or a related collapse in trophic organisation despite the disturbance caused by logging. These food webs appear able to bend without breaking in the face of some forms of anthropogenic disturbance.

Bat response to differing fire severity in mixed-conifer forest California, USA

Wildlife response to natural disturbances such as fire is of conservation concern to managers, policy makers, and scientists, yet information is scant beyond a few well-studied groups (e.g., birds, small mammals). We examined the effects of wildfire severity on bats, a taxon of high conservation concern, at both the stand (<1 ha) and landscape scale in response to the 2002 McNally fire in the Sierra Nevada region of California, USA. One year after fire, we conducted surveys of echolocation activity at 14 survey locations, stratified in riparian and upland habitat, in mixed-conifer forest habitats spanning three levels of burn severity: unburned, moderate, and high. Bat activity in burned areas was either equivalent or higher than in unburned stands for all six phonic groups measured, with four groups having significantly greater activity in at least one burn severity level. Evidence of differentiation between fire severities was observed with some Myotis species having higher levels of activity in stands of high-severity burn. Larger-bodied bats, typically adapted to more open habitat, showed no response to fire. We found differential use of riparian and upland habitats among the phonic groups, yet no interaction of habitat type by fire severity was found. Extent of high-severity fire damage in the landscape had no effect on activity of bats in unburned sites suggesting no landscape effect of fire on foraging site selection and emphasizing stand-scale conditions driving bat activity. Results from this fire in mixed-conifer forests of California suggest that bats are resilient to landscape-scale fire and that some species are preferentially selecting burned areas for foraging, perhaps facilitated by reduced clutter and increased post-fire availability of prey and roosts.

Local and landscape factors determining occurrence of phyllostomid bats in tropical secondary forests

Neotropical forests are being increasingly replaced by a mosaic of patches of different successional stages, agricultural fields and pasture lands. Consequently, the identification of factors shaping the performance of taxa in anthropogenic landscapes is gaining importance, especially for taxa playing critical roles in ecosystem functioning. As phyllostomid bats provide important ecological services through seed dispersal, pollination and control of animal populations, in this study we assessed the relationships between phyllostomid occurrence and the variation in local and landscape level habitat attributes caused by disturbance. We mist-netted phyllostomids in 12 sites representing 4 successional stages of a tropical dry forest (initial, early, intermediate and late). We also quantitatively characterized the habitat attributes at the local (vegetation structure complexity) and the landscape level (forest cover, area and diversity of patches). Two focal scales were considered for landscape characterization: 500 and 1000 m. During 142 sampling nights, we captured 606 individuals representing 15 species and 4 broad guilds. Variation in phyllostomid assemblages, ensembles and populations was associated with variation in local and landscape habitat attributes, and this association was scale-dependent. Specifically, we found a marked guild-specific response, where the abundance of nectarivores tended to be negatively associated with the mean area of dry forest patches, while the abundance of frugivores was positively associated with the percentage of riparian forest. These results are explained by the prevalence of chiropterophilic species in the dry forest and of chiropterochorous species in the riparian forest. Our results indicate that different vegetation classes, as well as a multi-spatial scale approach must be considered for evaluating bat response to variation in landscape attributes. Moreover, for the long-term conservation of phyllostomids in anthropogenic landscapes, we must realize that the management of the habitat at the landscape level is as important as the conservation of particular forest fragments.

Reduced-impact logging and biodiversity conservation: a case study from Borneo

A key driver of rain forest degradation is rampant commercial logging. Reduced-impact logging (RIL) techniques dramatically reduce residual damage to vegetation and soils, and they enhance the long-term economic viability of timber operations when compared to conventionally managed logging enterprises. Consequently, the application of RIL is increasing across the tropics, yet our knowledge of the potential for RIL also to reduce the negative impacts of logging on biodiversity is minimal. We compare the impacts of RIL on birds, leaf-litter ants, and dung beetles during a second logging rotation in Sabah, Borneo, with the impacts of conventional logging (CL) as well as with primary (unlogged) forest. Our study took place 1-8 years after the cessation of logging. The species richness and composition of RIL vs. CL forests were very similar for each taxonomic group. Both RIL and CL differed significantly from unlogged forests in terms of bird and ant species composition (although both retained a large number of the species found in unlogged forests), whereas the composition of dung beetle communities did not differ significantly among forest types. Our results show little difference in biodiversity between RIL and CL over the short-term. However, biodiversity benefits from RIL may accrue over longer time periods after the cessation of logging. We highlight a severe lack of studies investigating this possibility. Moreover, if RIL increases the economic value of selectively logged forests (e.g., via REDD+, a United Nations program: Reducing Emissions from Deforestation and Forest Degradation in Developing Countries), it could help prevent them from being converted to agricultural plantations, which results in a tremendous loss of biodiversity.

Impacts of roads, hunting, and habitat alteration on nocturnal mammals in African rainforests

Nocturnal mammals are poorly studied in Central Africa, a region experiencing dramatic increases in logging, roads, and hunting activity. In the rainforests of southern Gabon, we used spotlighting surveys to estimate abundances of nocturnal mammal species and guilds at varying distances from forest roads and between hunted and unhunted treatments (comparing a 130-km(2) oil concession that was nearly free of hunting, with nearby areas outside the concession that had moderate hunting pressure). At each of 12 study sites that were evenly divided between hunted and unhunted areas, we established standardized 1-km transects along road verges and at 50, 300, and 600 m from the road. We then repeatedly surveyed mammals at each site during 2006. Hunting had few apparent effects on this assemblage. Nevertheless, the species richness and often the abundance of nocturnal primates, smaller ungulates, and carnivores were significantly depressed within approximately 30 m of roads. Scansorial rodents increased in abundance in hunted forests, possibly in response to habitat changes caused by logging or nearby swidden farming. In multiple-regression models many species and guilds were significantly influenced by forest-canopy and understory cover, both of which are altered by logging and by certain abiotic variables. In general, nocturnal species, many of which are arboreal or relatively small in size (<10 kg), were less strongly influenced by hunting and more strongly affected by human-induced changes in forest structure than were larger mammal species in our study area.