1
|
Zhang W, Yang S, Feng Y, Liang B, Li C, Li Q, Zeng Z, Ji X, Liu J, Wang Y. The tonoplast-localized OsTIP2;1 is involved in aluminum detoxification in rice. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2024; 215:109063. [PMID: 39208475 DOI: 10.1016/j.plaphy.2024.109063] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/13/2024] [Revised: 08/12/2024] [Accepted: 08/20/2024] [Indexed: 09/04/2024]
Abstract
Aluminum (Al) stress is a significant issue in acidic soils, severely affecting crop growth and yield. Rice is notably resilient to Al toxicity, yet the internal tolerance mechanisms remain inadequately addressed. Here, we examined the role of OsTIP2;1, a tonoplast-bound intrinsic protein (TIP), in rice's internal Al detoxification. Our findings reveal that OsTIP2;1 expression was quickly and explicitly activated by Al ions in roots but not in shoots. The OsTIP2;1-GFP protein localizes to the tonoplast in plant and yeast cells. Non-functional ostip2;1 rice mutants were more vulnerable to Al toxicity. In the roots, the ostip2;1 mutants exhibited considerably lower levels of Al in the cell sap, primarily the vacuolar contents, than in the wild-type plant. Moreover, the ostip2;1 mutants showed reduced Al accumulation in the roots but increased translocation to the shoots. Heterologous expression of tonoplast-localized OsTIP2;1 in yeast led to enhanced Al tolerance, suggesting that OsTIP2;1 facilitates Al sequestration to the vacuole. These findings indicate that OsTIP2;1 mediates internal detoxification by transporting Al into the vacuole in the root and restricting its transport to above-ground tissues, thus contributing to Al resistance in rice.
Collapse
Affiliation(s)
- Weiyin Zhang
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, Guangdong, China; School of Life Sciences, Guangzhou University, Guangzhou, Guangdong, China
| | - Shaohua Yang
- Institute of Biotechnology, Fujian Academy of Agricultural Sciences, Fuzhou, Fujian, China
| | - Yimeng Feng
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, Guangdong, China
| | - Bixia Liang
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, Guangdong, China
| | - Chune Li
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, Guangdong, China
| | - Qian Li
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, Guangdong, China
| | - Zhenshun Zeng
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, Guangdong, China
| | - Xiyue Ji
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, Guangdong, China
| | - Jiping Liu
- Robert W. Holley Center, US Department of Agriculture, Agricultural Research Service, Cornell University, Ithaca, NY, USA; Plant Breeding and Genetics Section, School of Integrative Plant Sciences, Cornell University, Ithaca, NY, USA.
| | - Yuqi Wang
- School of Environmental Science and Engineering, Guangzhou University, Guangzhou, Guangdong, China; Robert W. Holley Center, US Department of Agriculture, Agricultural Research Service, Cornell University, Ithaca, NY, USA.
| |
Collapse
|
2
|
Shen Y, Li L, Du P, Xing X, Gu Z, Yu Z, Tao Y, Jiang H. Appropriate Drought Training Induces Optimal Drought Tolerance by Inducing Stepwise H 2O 2 Homeostasis in Soybean. PLANTS (BASEL, SWITZERLAND) 2024; 13:1202. [PMID: 38732418 PMCID: PMC11085929 DOI: 10.3390/plants13091202] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2024] [Revised: 04/13/2024] [Accepted: 04/19/2024] [Indexed: 05/13/2024]
Abstract
Soybean is considered one of the most drought-sensitive crops, and ROS homeostasis can regulate drought tolerance in these plants. Understanding the mechanism of H2O2 homeostasis and its regulatory effect on drought stress is important for improving drought tolerance in soybean. We used different concentrations of polyethylene glycol (PEG) solutions to simulate the progression from weak drought stress (0.2%, 0.5%, and 1% PEG) to strong drought stress (5% PEG). We investigated the responses of the soybean plant phenotype, ROS level, injury severity, antioxidant system, etc., to different weak drought stresses and subsequent strong drought stresses. The results show that drought-treated plants accumulated H2O2 for signaling and exhibited drought tolerance under the following stronger drought stress, among which the 0.5% PEG treatment had the greatest effect. Under the optimal treatment, there was qualitatively describable H2O2 homeostasis, characterized by a consistent increasing amplitude in H2O2 content compared with CK. The H2O2 signal formed under the optimum treatment induced the capacity of the antioxidant system to remove excess H2O2 to form a primary H2O2 homeostasis. The primary H2O2 homeostasis further induced senior H2O2 homeostasis under the following strong drought and maximized the improvement of drought tolerance. These findings might suggest that gradual drought training could result in stepwise H2O2 homeostasis to continuously improve drought tolerance.
Collapse
Affiliation(s)
- Yuqian Shen
- Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture and Rural Affairs, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agriculture University, Nanjing 210095, China; (Y.S.); (L.L.); (P.D.); (Z.G.); (Z.Y.); (Y.T.)
| | - Lei Li
- Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture and Rural Affairs, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agriculture University, Nanjing 210095, China; (Y.S.); (L.L.); (P.D.); (Z.G.); (Z.Y.); (Y.T.)
| | - Peng Du
- Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture and Rural Affairs, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agriculture University, Nanjing 210095, China; (Y.S.); (L.L.); (P.D.); (Z.G.); (Z.Y.); (Y.T.)
| | - Xinghua Xing
- Xuzhou Institute of Agricultural Sciences of Xu-Huai Region of Jiangsu, Xuzhou 221131, China
| | - Zhiwei Gu
- Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture and Rural Affairs, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agriculture University, Nanjing 210095, China; (Y.S.); (L.L.); (P.D.); (Z.G.); (Z.Y.); (Y.T.)
| | - Zhiming Yu
- Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture and Rural Affairs, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agriculture University, Nanjing 210095, China; (Y.S.); (L.L.); (P.D.); (Z.G.); (Z.Y.); (Y.T.)
| | - Yujia Tao
- Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture and Rural Affairs, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agriculture University, Nanjing 210095, China; (Y.S.); (L.L.); (P.D.); (Z.G.); (Z.Y.); (Y.T.)
| | - Haidong Jiang
- Key Laboratory of Crop Physiology and Ecology in Southern China, Ministry of Agriculture and Rural Affairs, Jiangsu Collaborative Innovation Center for Modern Crop Production, Nanjing Agriculture University, Nanjing 210095, China; (Y.S.); (L.L.); (P.D.); (Z.G.); (Z.Y.); (Y.T.)
| |
Collapse
|
3
|
Aksoy E, Yavuz C, Yagiz AK, Unel NM, Baloğlu MC. Genome-wide characterization and expression analysis of GATA transcription factors under combination of light wavelengths and drought stress in potato. PLANT DIRECT 2024; 8:e569. [PMID: 38659972 PMCID: PMC11042883 DOI: 10.1002/pld3.569] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/17/2023] [Revised: 01/25/2024] [Accepted: 01/31/2024] [Indexed: 04/26/2024]
Abstract
GATA is one of the prominent transcription factor families conserved among many organisms in eukaryotes and has different biological roles in many pathways, particularly in light regulation in plants. Although GATA transcription factors (TFs) have been identified in different crop species, their roles in abiotic stress tolerance have not been studied in potato. In this study, we identified 32 GATA TFs in potato (Solanum tuberosum) by in silico analyses, and expression levels of selected six genes were investigated in drought-tolerant (Sante) and sensitive (Agria) cultivars under light, drought, and combined (light + drought) stress conditions. According to the phylogenetic results, StGATA TFs were divided into four main groups (I, II, III, and IV) and different sub-groups in I and II (eight and five, respectively). StGATA genes were uniformly localized to each chromosome with a conserved exon/intron structure. The presence of cis-elements within the StGATA family further supported the possible involvement in abiotic stress tolerance and light response, tissue-specific expression, and hormonal regulation. Additional PPI investigations showed that these networks, especially for Groups I, II, and IV, play a significant role in response to light and drought stress. Six StGATAs were chosen from these groups for expressional profiling, and their expression in both Sante and Agria was mainly downregulated under purple and red lights, drought, and combined stress (blue + drought and purple + drought). The interactomes of selected StGATAs, StGATA3, StGATA24, and StGATA29 were analyzed, and the accessions with GATA motifs were checked for expression. The results showed that the target proteins, cyclin-P3-1, SPX domain-containing protein 1, mitochondrial calcium uniporter protein 2, mitogen-activated protein kinase kinase kinase YODA, and splicing factor 3 B subunit 4-like, mainly play a role in phytochrome-mediated stomatal patterning, development, and activity. Understanding the interactions between drought stress and the light response mechanisms in potato plants is essential. It will eventually be possible to enhance potato resilience to climate change by manipulating the TFs that play a role in these pathways.
Collapse
Affiliation(s)
- Emre Aksoy
- Faculty of Arts and Sciences, Department of BiologyMiddle East Technical UniversityAnkaraTürkiye
| | - Caner Yavuz
- Faculty of Agricultural Sciences and Technologies, Department of Agricultural Genetic EngineeringNiğde Ömer Halisdemir UniversityNiğdeTürkiye
| | - Ayten Kübra Yagiz
- Faculty of Agricultural Sciences and Technologies, Department of Agricultural Genetic EngineeringNiğde Ömer Halisdemir UniversityNiğdeTürkiye
| | - Necdet Mehmet Unel
- Plantomics Research Laboratory, Department of Genetics and Bioengineering, Faculty of Engineering and ArchitectureKastamonu UniversityKastamonuTürkiye
- Research and Application CenterKastamonu UniversityKastamonuTürkiye
| | - Mehmet Cengiz Baloğlu
- Plantomics Research Laboratory, Department of Genetics and Bioengineering, Faculty of Engineering and ArchitectureKastamonu UniversityKastamonuTürkiye
- Sabancı University Nanotechnology Research and Application Center (SUNUM)Sabancı UniversityTuzlaTürkiye
| |
Collapse
|
4
|
Li J, Xu Y, Yin K, Wang R, Guo X, Wang J, Zheng L. Exploring the influence mechanism of dissolved organic matter on the bioavailability and thyroid hormone disrupting effect of zinc: A case study of effluents from galvanizing plants. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2022; 241:113747. [PMID: 35709670 DOI: 10.1016/j.ecoenv.2022.113747] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/23/2022] [Revised: 06/01/2022] [Accepted: 06/03/2022] [Indexed: 06/15/2023]
Abstract
The effect of dissolved organic matter (DOM) on metal bioavailability and toxicity is a complex process. Effluents from galvanizing plants containing large amounts of DOM and Zn were selected to investigate the potential influence and mechanism of DOM on Zn bioavailability and its role in inducing thyroid hormone disrupting effects. Thyroid hormone disrupting effects were evaluated using a recombinant thyroid hormone receptor β gene yeast assay. The results suggest that Zn could be the main metal contributor to the toxic effects. Then, Zn-binding characteristics with different fluorescent components of DOM were analyzed using three-dimensional excitation emission matrix fluorescence spectroscopy (3DEEM) and revealed that Zn was more susceptible to interactions with fulvic-like materials. Furthermore, DOM altered the cellular biouptake and compartmentalization processes of Zn by downregulating Zn transmembrane transport-related genes (ZRT1, ZRT2 and ZAP1) and upregulating detoxification-related genes (COT1 and ZRC1), thus altering thyroid toxicity. These results provide comprehensive insights into the influence and mechanism of DOM on bioavailability and thyroid toxicity of Zn and suggest that the influence is associated with complex physical, chemical and biological processes, indicating that more refined medium constraints along with subtle biological reactions should be considered when predicting the bioavailability and toxicity of Zn in environmental water samples.
Collapse
Affiliation(s)
- Jian Li
- Engineering Research Center of Groundwater Pollution Control and Remediation, Ministry of Education, College of Water Sciences, Beijing Normal University, Beijing 100875, China
| | - Ying Xu
- Engineering Research Center of Groundwater Pollution Control and Remediation, Ministry of Education, College of Water Sciences, Beijing Normal University, Beijing 100875, China
| | - Kun Yin
- China National Environmental Monitoring Centre, Beijing 100012, China
| | - Rongfang Wang
- Engineering Research Center of Groundwater Pollution Control and Remediation, Ministry of Education, College of Water Sciences, Beijing Normal University, Beijing 100875, China
| | - Xueru Guo
- Engineering Research Center of Groundwater Pollution Control and Remediation, Ministry of Education, College of Water Sciences, Beijing Normal University, Beijing 100875, China
| | - Jinsheng Wang
- Engineering Research Center of Groundwater Pollution Control and Remediation, Ministry of Education, College of Water Sciences, Beijing Normal University, Beijing 100875, China; Advanced Institute of Natural Sciences, Beijing Normal University at Zhuhai, Zhuhai 519087, China.
| | - Lei Zheng
- Engineering Research Center of Groundwater Pollution Control and Remediation, Ministry of Education, College of Water Sciences, Beijing Normal University, Beijing 100875, China.
| |
Collapse
|
5
|
Krishnappa G, Rathan ND, Sehgal D, Ahlawat AK, Singh SK, Singh SK, Shukla RB, Jaiswal JP, Solanki IS, Singh GP, Singh AM. Identification of Novel Genomic Regions for Biofortification Traits Using an SNP Marker-Enriched Linkage Map in Wheat ( Triticum aestivum L.). Front Nutr 2021; 8:669444. [PMID: 34211996 PMCID: PMC8239140 DOI: 10.3389/fnut.2021.669444] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/18/2021] [Accepted: 05/19/2021] [Indexed: 01/23/2023] Open
Abstract
Micronutrient and protein malnutrition is recognized among the major global health issues. Genetic biofortification is a cost-effective and sustainable strategy to tackle malnutrition. Genomic regions governing grain iron concentration (GFeC), grain zinc concentration (GZnC), grain protein content (GPC), and thousand kernel weight (TKW) were investigated in a set of 163 recombinant inbred lines (RILs) derived from a cross between cultivated wheat variety WH542 and a synthetic derivative (Triticum dicoccon PI94624/Aegilops tauschii [409]//BCN). The RIL population was genotyped using 100 simple-sequence repeat (SSR) and 736 single nucleotide polymorphism (SNP) markers and phenotyped in six environments. The constructed genetic map had a total genetic length of 7,057 cM. A total of 21 novel quantitative trait loci (QTL) were identified in 13 chromosomes representing all three genomes of wheat. The trait-wise highest number of QTL was identified for GPC (10 QTL), followed by GZnC (six QTL), GFeC (three QTL), and TKW (two QTL). Four novel stable QTL (QGFe.iari-7D.1, QGFe.iari-7D.2, QGPC.iari-7D.2, and QTkw.iari-7D) were identified in two or more environments. Two novel pleiotropic genomic regions falling between Xgwm350-AX-94958668 and Xwmc550-Xgwm350 in chromosome 7D harboring co-localized QTL governing two or more traits were also identified. The identified novel QTL, particularly stable and co-localized QTL, will be validated to estimate their effects on different genetic backgrounds for subsequent use in marker-assisted selection (MAS). Best QTL combinations were identified by the estimation of additive effects of the stable QTL for GFeC, GZnC, and GPC. A total of 11 RILs (eight for GZnC and three for GPC) having favorable QTL combinations identified in this study can be used as potential donors to develop bread wheat varieties with enhanced micronutrients and protein.
Collapse
Affiliation(s)
- Gopalareddy Krishnappa
- Division of Genetics, Indian Council of Agricultural Research-Indian Agricultural Research Institute, New Delhi, India.,Division of Crop Improvement, Indian Council of Agricultural Research-Indian Institute of Wheat and Barley Research, Karnal, India
| | | | - Deepmala Sehgal
- International Maize and Wheat Improvement Center, Texcoco, Mexico
| | - Arvind Kumar Ahlawat
- Division of Genetics, Indian Council of Agricultural Research-Indian Agricultural Research Institute, New Delhi, India
| | - Santosh Kumar Singh
- Division of Genetics, Indian Council of Agricultural Research-Indian Agricultural Research Institute, New Delhi, India
| | - Sumit Kumar Singh
- Division of Genetics, Indian Council of Agricultural Research-Indian Agricultural Research Institute, New Delhi, India
| | - Ram Bihari Shukla
- Division of Genetics, Indian Council of Agricultural Research-Indian Agricultural Research Institute, New Delhi, India
| | - Jai Prakash Jaiswal
- Department of Genetics and Plant Breeding, Govind Ballabh Pant University of Agriculture and Technology, Pantnagar, India
| | - Ishwar Singh Solanki
- Indian Council of Agricultural Research-Indian Agricultural Research Institute, Regional Station, Samastipur, India
| | - Gyanendra Pratap Singh
- Division of Genetics, Indian Council of Agricultural Research-Indian Agricultural Research Institute, New Delhi, India
| | - Anju Mahendru Singh
- Division of Genetics, Indian Council of Agricultural Research-Indian Agricultural Research Institute, New Delhi, India
| |
Collapse
|
6
|
Yang Y, Li L, Qu LJ. Plant Mediator complex and its critical functions in transcription regulation. JOURNAL OF INTEGRATIVE PLANT BIOLOGY 2016; 58:106-18. [PMID: 26172375 DOI: 10.1111/jipb.12377] [Citation(s) in RCA: 47] [Impact Index Per Article: 5.9] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/05/2015] [Accepted: 07/07/2015] [Indexed: 05/08/2023]
Abstract
The Mediator complex is an important component of the eukaryotic transcriptional machinery. As an essential link between transcription factors and RNA polymerase II, the Mediator complex transduces diverse signals to genes involved in different pathways. The plant Mediator complex was recently purified and comprises conserved and specific subunits. It functions in concert with transcription factors to modulate various responses. In this review, we summarize the recent advances in understanding the plant Mediator complex and its diverse roles in plant growth, development, defense, non-coding RNA production, response to abiotic stresses, flowering, genomic stability and metabolic homeostasis. In addition, the transcription factors interacting with the Mediator complex are also highlighted.
Collapse
Affiliation(s)
- Yan Yang
- State Key Laboratory of Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences, College of Life Sciences, Peking University, Beijing 100871, China
| | - Ling Li
- State Key Laboratory of Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences, College of Life Sciences, Peking University, Beijing 100871, China
| | - Li-Jia Qu
- State Key Laboratory of Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences, College of Life Sciences, Peking University, Beijing 100871, China
- The National Plant Gene Research Center (Beijing), Beijing 100101, China
| |
Collapse
|