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Zahid S, Schulfer AF, Di Stilio VS. A eudicot MIXTA family ancestor likely functioned in both conical cells and trichomes. FRONTIERS IN PLANT SCIENCE 2023; 14:1288961. [PMID: 38173925 PMCID: PMC10764028 DOI: 10.3389/fpls.2023.1288961] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/05/2023] [Accepted: 11/27/2023] [Indexed: 01/05/2024]
Abstract
The MIXTA family of MYB transcription factors modulate the development of diverse epidermal features in land plants. This study investigates the evolutionary history and function of the MIXTA gene family in the early-diverging eudicot model lineage Thalictrum (Ranunculaceae), with R2R3 SBG9-A MYB transcription factors representative of the pre-core eudicot duplication and thus hereby referred to as "paleoMIXTA" (PMX). Cloning and phylogenetic analysis of Thalictrum paleoMIXTA (ThPMX) orthologs across 23 species reveal a genus-wide duplication coincident with a whole-genome duplication. Expression analysis by qPCR confirmed that the highest expression is found in carpels, while newly revealing high expression in leaves and nuanced differences between paralogs in representative polyploid species. The single-copy ortholog from the diploid species T. thalictroides (TthPMX, previously TtMYBML2), which has petaloid sepals with conical-papillate cells and trichomes on leaves, was functionally characterized by virus-induced gene silencing (VIGS), and its role in leaves was also assessed from heterologous overexpression in tobacco. Another ortholog from a species with conical-papillate cells on stamen filaments, TclPMX, was also targeted for silencing. Overexpression assays in tobacco provide further evidence that the paleoMIXTA lineage has the potential for leaf trichome function in a core eudicot. Transcriptome analysis by RNA-Seq on leaves of VIGS-treated plants suggests that TthPMX modulates leaf trichome development and morphogenesis through microtubule-associated mechanisms and that this may be a conserved pathway for eudicots. These experiments provide evidence for a combined role for paleoMIXTA orthologs in (leaf) trichomes and (floral) conical-papillate cells that, together with data from other systems, makes the functional reconstruction of a eudicot ancestor most likely as also having a combined function.
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Mou DF, Kundu P, Pingault L, Puri H, Shinde S, Louis J. Monocot crop-aphid interactions: plant resilience and aphid adaptation. CURRENT OPINION IN INSECT SCIENCE 2023; 57:101038. [PMID: 37105496 DOI: 10.1016/j.cois.2023.101038] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/14/2023] [Revised: 04/15/2023] [Accepted: 04/17/2023] [Indexed: 05/24/2023]
Abstract
Globally, aphids cause immense economic damage to several crop plants. In addition, aphids vector several plant viral diseases that accelerate crop yield losses. While feeding, aphids release saliva that contains effectors, which modulate plant defense responses. Although there are many studies that describe the mechanisms that contribute to dicot plant-aphid interactions, our understanding of monocot crop defense mechanisms against aphids is limited. In this review, we focus on the interactions between monocot crops and aphids and report the recently characterized aphid effectors and their functions in aphid adaptation to plant immunity. Recent studies on plant defense against aphids in monocot-resistant and -tolerant crop lines have exploited various 'omic' approaches to understand the roles of early signaling molecules, phytohormones, and secondary metabolites in plant response to aphid herbivory. Unraveling key regulatory mechanisms underlying monocot crop resistance to aphids will lead to deeper understanding of sap-feeding insect management strategies for increased food security and sustainable agriculture.
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Affiliation(s)
- De-Fen Mou
- Department of Entomology, University of Nebraska-Lincoln, Lincoln, NE 68583, USA
| | - Pritha Kundu
- Department of Entomology, University of Nebraska-Lincoln, Lincoln, NE 68583, USA
| | - Lise Pingault
- Department of Entomology, University of Nebraska-Lincoln, Lincoln, NE 68583, USA
| | - Heena Puri
- Department of Entomology, University of Nebraska-Lincoln, Lincoln, NE 68583, USA
| | - Sanket Shinde
- Department of Entomology, University of Nebraska-Lincoln, Lincoln, NE 68583, USA
| | - Joe Louis
- Department of Entomology, University of Nebraska-Lincoln, Lincoln, NE 68583, USA; Department of Biochemistry, University of Nebraska-Lincoln, Lincoln, NE 68583, USA.
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3
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Kou X, Bai S, Luo Y, Yu J, Guo H, Wang C, Zhang H, Chen C, Liu X, Ji W. Construction of a Modified Clip Cage and Its Effects on the Life-History Parameters of Sitobion avenae (Fabricius) and Defense Responses of Triticum aestivum. INSECTS 2022; 13:777. [PMID: 36135478 PMCID: PMC9503654 DOI: 10.3390/insects13090777] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/22/2022] [Revised: 08/19/2022] [Accepted: 08/24/2022] [Indexed: 06/16/2023]
Abstract
Clip cages are commonly used to confine aphids or other small insects to a single leaf when conducting plant-small insect interaction studies; however, clip cages are usually heavy or do not efficiently transmit light, which has an impact on leaf physiology, limiting their application. Here, simple, lightweight, and transparent modified clip cages were constructed using punched clear plastic cups, cut transparent polyvinyl chloride sheets, nylon organdy mesh, and bent duck-bill clips. These cages can be clipped directly onto dicot leaves or attached to monocot leaves with bamboo skewers and elastic bands. The weight, production time, and aphid escape rates of the modified clip cages were 3.895 ± 0.004 g, less than 3 min, and 2.154 ± 0.323%, respectively. The effects of the modified clip cage on the growth, development, and reproduction of the English grain aphid (Sitobion avenae Fabricius) in comparison with the whole cage were studied. The biochemical responses of wheat (Triticum aestivum) to the cages were also investigated. No significant differences were observed in the life table parameters, nymph mortality, and adult fecundity in S. avenae confined to clip cages and whole cages, but the clip cages were more time efficient than whole cages when conducting life table studies. Moreover, the hydrogen peroxide accumulation, callose deposition, and cell necrosis in wheat leaves covered by empty clip cages and empty whole cages were similar, and significantly lower than treatments where the aphids were inside the clip cage. The results demonstrate that the modified clip cages had negligible effects on the plant and aphid physiology, suggesting that they are effective for studying plant-small insect interactions.
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Affiliation(s)
- Xudan Kou
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Agronomy, Northwest A&F University, Yangling 712100, China
| | - Shichao Bai
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Agronomy, Northwest A&F University, Yangling 712100, China
| | - Yufeng Luo
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Agronomy, Northwest A&F University, Yangling 712100, China
| | - Jiuyang Yu
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Agronomy, Northwest A&F University, Yangling 712100, China
| | - Huan Guo
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Agronomy, Northwest A&F University, Yangling 712100, China
| | - Chao Wang
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Agronomy, Northwest A&F University, Yangling 712100, China
| | - Hong Zhang
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Agronomy, Northwest A&F University, Yangling 712100, China
- Shaanxi Research Station of Crop Gene Resources and Germplasm Enhancement, Ministry of Agriculture, Yangling 712100, China
| | - Chunhuan Chen
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Agronomy, Northwest A&F University, Yangling 712100, China
- Shaanxi Research Station of Crop Gene Resources and Germplasm Enhancement, Ministry of Agriculture, Yangling 712100, China
| | - Xinlun Liu
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Agronomy, Northwest A&F University, Yangling 712100, China
- Shaanxi Research Station of Crop Gene Resources and Germplasm Enhancement, Ministry of Agriculture, Yangling 712100, China
| | - Wanquan Ji
- State Key Laboratory of Crop Stress Biology for Arid Areas and College of Agronomy, Northwest A&F University, Yangling 712100, China
- Shaanxi Research Station of Crop Gene Resources and Germplasm Enhancement, Ministry of Agriculture, Yangling 712100, China
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Leybourne DJ, Valentine TA, Binnie K, Taylor A, Karley AJ, Bos JIB. Drought stress increases the expression of barley defence genes with negative consequences for infesting cereal aphids. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:2238-2250. [PMID: 35090009 DOI: 10.1093/jxb/erac010] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/14/2021] [Accepted: 01/26/2022] [Indexed: 06/14/2023]
Abstract
Crops are exposed to myriad abiotic and biotic stressors with negative consequences. Two stressors that are expected to increase under climate change are drought and infestation with herbivorous insects, including important aphid species. Expanding our understanding of the impact drought has on the plant-aphid relationship will become increasingly important under future climate scenarios. Here we use a previously characterized plant-aphid system comprising a susceptible variety of barley, a wild relative of barley with partial aphid resistance, and the bird cherry-oat aphid to examine the drought-plant-aphid relationship. We show that drought has a negative effect on plant physiology and aphid fitness, and provide evidence to suggest that plant resistance influences aphid responses to drought stress. Furthermore, we show that the expression of thionin genes, plant defensive compounds that contribute to aphid resistance, increase in susceptible plants exposed to drought stress but remain at constant levels in the partially resistant plant, suggesting that they play an important role in determining the success of aphid populations. This study highlights the role of plant defensive processes in mediating the interactions between the environment, plants, and herbivorous insects.
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Affiliation(s)
- Daniel J Leybourne
- Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee DD2 5DA, UK
- Cell and Molecular Sciences, the James Hutton Institute, Invergowrie, Dundee DD2 5DA, UK
- Ecological Sciences, the James Hutton Institute, Invergowrie, Dundee DD2 5DA, UK
| | - Tracy A Valentine
- Ecological Sciences, the James Hutton Institute, Invergowrie, Dundee DD2 5DA, UK
| | - Kirsty Binnie
- Ecological Sciences, the James Hutton Institute, Invergowrie, Dundee DD2 5DA, UK
| | - Anna Taylor
- Ecological Sciences, the James Hutton Institute, Invergowrie, Dundee DD2 5DA, UK
| | - Alison J Karley
- Ecological Sciences, the James Hutton Institute, Invergowrie, Dundee DD2 5DA, UK
| | - Jorunn I B Bos
- Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee DD2 5DA, UK
- Cell and Molecular Sciences, the James Hutton Institute, Invergowrie, Dundee DD2 5DA, UK
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Host Acceptance and Plant Resistance: A Comparative Behavioral Study of Myzus persicae and Acyrthosiphon pisum. INSECTS 2021; 12:insects12110975. [PMID: 34821776 PMCID: PMC8622697 DOI: 10.3390/insects12110975] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/31/2021] [Revised: 10/24/2021] [Accepted: 10/26/2021] [Indexed: 11/24/2022]
Abstract
Simple Summary Aphids are one of the most destructive insect pests worldwide. The green peach aphid (Myzus persicae) feeds on a broad range of plants, whereas the pea aphid (Acyrthosiphon pisum) only feeds on legumes. In this study, these two aphid species were used to investigate host acceptance and plant resistance to aphid feeding. Experiments on host plant preference and aphid performance (with regard to survival, development, and fecundity) confirmed that rape (Brassica rapa) is a suitable host and that faba bean (Vicia faba) is a poor host for the green peach aphid; for the pea aphid, faba bean is a suitable host, whereas rape is a nonhost. The probing and feeding behavior of these two aphid species on rape and faba bean was examined, and the results demonstrated the feeding preferences of these two aphid species. The green peach aphid had difficulty ingesting the phloem sap of faba bean. For the nonhost, the pea aphid spent relatively little time on mesophyll probing and did not achieve phloem sap ingestion. Furthermore, the effects of the probing and feeding behavior of specialist and generalist aphids on the spread of plant diseases caused by viruses were discussed. Abstract Aphids are prominent phloem-feeding insect pests. Myzus persicae and Acyrthosiphon pisum are generalist and specialist species, respectively. In this study, these two aphid species were used to investigate host acceptance and plant resistance to aphid feeding. M.persicae survived and reproduced on rape (Brassica rapa), but few individuals (9%) survived on faba bean (Vicia faba). A.pisum survived and reproduced on faba bean, but no A.pisum survived on rape. The probing and feeding behavior of M. persicae and A. pisum on rape and faba bean was examined using an electrical penetration graph (EPG) technique. The results demonstrated the feeding preferences of these two aphid species. The EPG results suggest that the resistance of faba bean to M. persicae and that of rape to A. pisum are likely residing in the phloem and mesophyll tissues, respectively. Due to the distinct probing and feeding behaviors, specialist and generalist aphids would have different impacts on the epidemiology of plant viral diseases. The findings can be applied to the management of viral diseases transmitted by specialist or generalist aphids in crop production.
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Enders L, Begcy K. Unconventional routes to developing insect-resistant crops. MOLECULAR PLANT 2021; 14:1439-1453. [PMID: 34217871 DOI: 10.1016/j.molp.2021.06.029] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/01/2021] [Revised: 05/26/2021] [Accepted: 06/29/2021] [Indexed: 06/13/2023]
Abstract
Concerns over widespread use of insecticides and heightened insect pest virulence under climate change continue to fuel the need for environmentally safe and sustainable control strategies. However, to develop such strategies, a better understanding of the molecular basis of plant-pest interactions is still needed. Despite decades of research investigating plant-insect interactions, few examples exist where underlying molecular mechanisms are well characterized, and even rarer are cases where this knowledge has been successfully applied to manage harmful agricultural pests. Consequently, the field appears to be static, urgently needing shifts in approaches to identify novel mechanisms by which insects colonize plants and plants avoid insect pressure. In this perspective, we outline necessary steps for advancing holistic methodologies that capture complex plant-insect molecular interactions. We highlight novel and underexploited approaches in plant-insect interaction research as essential routes to translate knowledge of underlying molecular mechanisms into durable pest control strategies, including embracing microbial partnerships, identifying what makes a plant an unsuitable host, capitalizing on tolerance of insect damage, and learning from cases where crop domestication and agronomic practices enhance pest virulence.
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Affiliation(s)
- Laramy Enders
- Purdue University, Department of Entomology, West Lafayette, IN 47907, USA.
| | - Kevin Begcy
- University of Florida, Environmental Horticulture Department, Gainesville, FL 32611, USA.
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7
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Escudero-Martinez C, Leybourne DJ, Bos JIB. Plant resistance in different cell layers affects aphid probing and feeding behaviour during non-host and poor-host interactions. BULLETIN OF ENTOMOLOGICAL RESEARCH 2021; 111:31-38. [PMID: 32539886 DOI: 10.1017/s0007485320000231] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
Aphids are phloem-feeding insects that cause economic losses to crops globally. Whilst aphid interactions with susceptible plants and partially resistant genotypes have been well characterized, the interactions between aphids and non-host species are not well understood. Unravelling these non-host interactions can identify the mechanisms which contribute to plant resistance. Using contrasting aphid-host plant systems, including the broad host range pest Myzus persicae (host: Arabidopsis; poor-host: barley) and the cereal pest Rhopalosiphum padi (host: barley; non-host: Arabidopsis), we conducted a range of physiological experiments and compared aphid settling and probing behaviour on a host plant vs either a non-host or poor-host. In choice experiments, we observed that around 10% of aphids selected a non-host or poor-host plant species after 24 h. Using the Electrical Penetration Graph technique, we showed that feeding and probing behaviours differ during non-host and poor-host interactions when compared with a host interaction. In the Arabidopsis non-host interaction with the cereal pest R. padi aphids were unable to reach and feed on the phloem, with resistance likely residing in the mesophyll cell layer. In the barley poor-host interaction with M. persicae, resistance is likely phloem-based as phloem ingestion was reduced compared with the host interaction. Overall, our data suggest that plant resistance to aphids in non-host and poor-host interactions with these aphid species likely resides in different plant cell layers. Future work will take into account specific cell layers where resistances are based to dissect the underlying mechanisms and gain a better understanding of how we may improve crop resistance to aphids.
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Affiliation(s)
- Carmen Escudero-Martinez
- Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, Dundee, DD2 5DA, UK
- Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee, Scotland
| | - Daniel J Leybourne
- Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, Dundee, DD2 5DA, UK
- Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee, Scotland
| | - Jorunn I B Bos
- Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, Dundee, DD2 5DA, UK
- Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee, Scotland
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8
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Jacques S, Sperschneider J, Garg G, Thatcher LF, Gao LL, Kamphuis LG, Singh KB. A functional genomics approach to dissect spotted alfalfa aphid resistance in Medicago truncatula. Sci Rep 2020; 10:22159. [PMID: 33335168 PMCID: PMC7746763 DOI: 10.1038/s41598-020-78904-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2020] [Accepted: 12/01/2020] [Indexed: 12/03/2022] Open
Abstract
Aphids are virus-spreading insect pests affecting crops worldwide and their fast population build-up and insecticide resistance make them problematic to control. Here, we aim to understand the molecular basis of spotted alfalfa aphid (SAA) or Therioaphis trifolii f. maculata resistance in Medicago truncatula, a model organism for legume species. We compared susceptible and resistant near isogenic Medicago lines upon SAA feeding via transcriptome sequencing. Expression of genes involved in defense and stress responses, protein kinase activity and DNA binding were enriched in the resistant line. Potentially underlying some of these changes in gene expression was the finding that members of the MYB, NAC, AP2 domain and ERF transcription factor gene families were differentially expressed in the resistant versus susceptible lines. A TILLING population created in the resistant cultivar was screened using exome capture sequencing and served as a reverse genetics tool to functionally characterise genes involved in the aphid resistance response. This screening revealed three transcription factors (a NAC, AP2 domain and ERF) as important regulators in the defence response, as a premature stop-codon in the resistant background led to a delay in aphid mortality and enhanced plant susceptibility. This combined functional genomics approach will facilitate the future development of pest resistant crops by uncovering candidate target genes that can convey enhanced aphid resistance.
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Affiliation(s)
- Silke Jacques
- CSIRO Agriculture and Food, Floreat, WA, 6014, Australia.,Centre for Crop and Disease Management, Curtin University, Bentley, WA, 6102, Australia
| | - Jana Sperschneider
- Biological Data Science Institute, The Australian National University, Canberra, ACT, 2600, Australia
| | - Gagan Garg
- CSIRO Agriculture and Food, Floreat, WA, 6014, Australia
| | | | - Ling-Ling Gao
- CSIRO Agriculture and Food, Floreat, WA, 6014, Australia
| | - Lars G Kamphuis
- CSIRO Agriculture and Food, Floreat, WA, 6014, Australia.,Centre for Crop and Disease Management, Curtin University, Bentley, WA, 6102, Australia.,The UWA Institute of Agriculture, University of Western Australia, Crawley, WA, 6009, Australia
| | - Karam B Singh
- CSIRO Agriculture and Food, Floreat, WA, 6014, Australia. .,Centre for Crop and Disease Management, Curtin University, Bentley, WA, 6102, Australia. .,The UWA Institute of Agriculture, University of Western Australia, Crawley, WA, 6009, Australia.
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9
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Pingault L, Palmer NA, Koch KG, Heng-Moss T, Bradshaw JD, Seravalli J, Twigg P, Louis J, Sarath G. Differential Defense Responses of Upland and Lowland Switchgrass Cultivars to a Cereal Aphid Pest. Int J Mol Sci 2020; 21:ijms21217966. [PMID: 33120946 PMCID: PMC7672581 DOI: 10.3390/ijms21217966] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2020] [Revised: 10/22/2020] [Accepted: 10/24/2020] [Indexed: 02/01/2023] Open
Abstract
Yellow sugarcane aphid (YSA) (Sipha flava, Forbes) is a damaging pest on many grasses. Switchgrass (Panicum virgatum L.), a perennial C4 grass, has been selected as a bioenergy feedstock because of its perceived resilience to abiotic and biotic stresses. Aphid infestation on switchgrass has the potential to reduce the yields and biomass quantity. Here, the global defense response of switchgrass cultivars Summer and Kanlow to YSA feeding was analyzed by RNA-seq and metabolite analysis at 5, 10, and 15 days after infestation. Genes upregulated by infestation were more common in both cultivars compared to downregulated genes. In total, a higher number of differentially expressed genes (DEGs) were found in the YSA susceptible cultivar (Summer), and fewer DEGs were observed in the YSA resistant cultivar (Kanlow). Interestingly, no downregulated genes were found in common between each time point or between the two switchgrass cultivars. Gene co-expression analysis revealed upregulated genes in Kanlow were associated with functions such as flavonoid, oxidation-response to chemical, or wax composition. Downregulated genes for the cultivar Summer were found in co-expression modules with gene functions related to plant defense mechanisms or cell wall composition. Global analysis of defense networks of the two cultivars uncovered differential mechanisms associated with resistance or susceptibility of switchgrass in response to YSA infestation. Several gene co-expression modules and transcription factors correlated with these differential defense responses. Overall, the YSA-resistant Kanlow plants have an enhanced defense even under aphid uninfested conditions.
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Affiliation(s)
- Lise Pingault
- Department of Entomology, University of Nebraska-Lincoln, Lincoln, NE 68583, USA; (L.P.); (K.G.K.); (T.H.-M.); (J.D.B.)
| | - Nathan A. Palmer
- Wheat, Sorghum, and Forage Research Unit, USDA-ARS, Lincoln, NE 68583, USA;
| | - Kyle G. Koch
- Department of Entomology, University of Nebraska-Lincoln, Lincoln, NE 68583, USA; (L.P.); (K.G.K.); (T.H.-M.); (J.D.B.)
| | - Tiffany Heng-Moss
- Department of Entomology, University of Nebraska-Lincoln, Lincoln, NE 68583, USA; (L.P.); (K.G.K.); (T.H.-M.); (J.D.B.)
| | - Jeffrey D. Bradshaw
- Department of Entomology, University of Nebraska-Lincoln, Lincoln, NE 68583, USA; (L.P.); (K.G.K.); (T.H.-M.); (J.D.B.)
| | - Javier Seravalli
- Redox Biology Center, Department of Biochemistry, University of Nebraska-Lincoln, Lincoln, NE 68588, USA;
| | - Paul Twigg
- Biology Department, University of Nebraska-Kearney, Kearney, NE 68849, USA;
| | - Joe Louis
- Department of Entomology, University of Nebraska-Lincoln, Lincoln, NE 68583, USA; (L.P.); (K.G.K.); (T.H.-M.); (J.D.B.)
- Department of Biochemistry, University of Nebraska-Lincoln, Lincoln, NE 68583, USA
- Correspondence: (J.L.); (G.S.); Tel.: +1-402-472-8098 (J.L.); +1-402-472-4204 (G.S.)
| | - Gautam Sarath
- Department of Entomology, University of Nebraska-Lincoln, Lincoln, NE 68583, USA; (L.P.); (K.G.K.); (T.H.-M.); (J.D.B.)
- Wheat, Sorghum, and Forage Research Unit, USDA-ARS, Lincoln, NE 68583, USA;
- Correspondence: (J.L.); (G.S.); Tel.: +1-402-472-8098 (J.L.); +1-402-472-4204 (G.S.)
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10
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Silva-Sanzana C, Estevez JM, Blanco-Herrera F. Influence of cell wall polymers and their modifying enzymes during plant-aphid interactions. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:3854-3864. [PMID: 31828324 PMCID: PMC7316967 DOI: 10.1093/jxb/erz550] [Citation(s) in RCA: 21] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2019] [Accepted: 12/11/2019] [Indexed: 05/05/2023]
Abstract
Aphids are a major issue for commercial crops. These pests drain phloem nutrients and transmit ~50% of the known insect-borne viral diseases. During aphid feeding, trophic structures called stylets advance toward the phloem intercellularly, disrupting cell wall polymers. It is thought that cell wall-modifying enzymes (CWMEs) present in aphid saliva facilitate stylet penetration through this intercellular polymer network. Additionally, different studies have demonstrated that host settling preference, feeding behavior, and colony performance of aphids are influenced by modulating the CWME expression levels in host plants. CWMEs have been described as critical defensive elements for plants, but also as a key virulence factor for plant pathogens. However, whether CWMEs are elements of the plant defense mechanisms or the aphid infestation process remains unclear. Therefore, in order to better consider the function of CWMEs and cell wall-derived damage-associated molecular patterns (DAMPs) during plant-aphid interactions, the present review integrates different hypotheses, perspectives, and experimental evidence in the field of plant-aphid interactions and discusses similarities to other well-characterized models such as the fungi-plant pathosystems from the host and the attacker perspectives.
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Affiliation(s)
- Christian Silva-Sanzana
- Centro de Biotecnología Vegetal, Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago, Chile
| | - José M Estevez
- Centro de Biotecnología Vegetal, Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago, Chile
- Fundación Instituto Leloir and IIBBA-CONICET, Buenos Aires, Argentina
| | - Francisca Blanco-Herrera
- Centro de Biotecnología Vegetal, Facultad de Ciencias de la Vida, Universidad Andres Bello, Santiago, Chile
- Millennium Institute for Integrative Biology (IBio), Santiago, Chile
- Center of Applied Ecology and Sustainability (CAPES),Chile
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11
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Escudero-Martinez C, Rodriguez PA, Liu S, Santos PA, Stephens J, Bos JIB. An aphid effector promotes barley susceptibility through suppression of defence gene expression. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:2796-2807. [PMID: 31989174 PMCID: PMC7210766 DOI: 10.1093/jxb/eraa043] [Citation(s) in RCA: 20] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/08/2019] [Accepted: 01/27/2020] [Indexed: 05/21/2023]
Abstract
Aphids secrete diverse repertoires of effectors into their hosts to promote the infestation process. While 'omics' approaches facilitated the identification and comparison of effector repertoires from a number of aphid species, the functional characterization of these proteins has been limited to dicot (model) plants. The bird cherry-oat aphid Rhopalosiphum padi is a pest of cereal crops, including barley. Here, we extend efforts to characterize aphid effectors with regard to their role in promoting susceptibility to the R. padi-barley interaction. We selected three R. padi effectors based on sequence similarity to previously characterized Myzus persicae effectors and assessed their subcellular localization, expression, and role in promoting plant susceptibility. Expression of R. padi effectors RpC002 and Rp1 in transgenic barley lines enhanced plant susceptibility to R. padi but not M. persicae, for which barley is a poor host. Characterization of Rp1 transgenic barley lines revealed reduced gene expression of plant hormone signalling genes relevant to plant-aphid interactions, indicating that this effector enhances susceptibility by suppressing plant defences in barley. Our data suggest that some aphid effectors specifically function when expressed in host species, and feature activities that benefit their corresponding aphid species.
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Affiliation(s)
- Carmen Escudero-Martinez
- Cell and Molecular Sciences, The James Hutton Institute, Dundee, UK
- Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee, UK
| | - Patricia A Rodriguez
- Cell and Molecular Sciences, The James Hutton Institute, Dundee, UK
- Helmholtz Zentrum München, Institute of Network Biology (INET), Munich, Germany
| | - Shan Liu
- Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee, UK
| | - Pablo A Santos
- Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee, UK
| | | | - Jorunn I B Bos
- Cell and Molecular Sciences, The James Hutton Institute, Dundee, UK
- Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee, UK
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12
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Sun M, Voorrips RE, van Kaauwen M, Visser RGF, Vosman B. The ability to manipulate ROS metabolism in pepper may affect aphid virulence. HORTICULTURE RESEARCH 2020; 7:6. [PMID: 31908809 PMCID: PMC6938493 DOI: 10.1038/s41438-019-0231-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2019] [Revised: 11/13/2019] [Accepted: 12/04/2019] [Indexed: 05/14/2023]
Abstract
Myzus persicae has severe economic impact on pepper (Capsicum) cultivation. Previously, we identified two populations of M. persicae, NL and SW, that were avirulent and virulent, respectively on C. baccatum accession PB2013071. The transcriptomics approach used in the current study, which is the first study to explore the pepper-aphid interaction at the whole genome gene expression level, revealed genes whose expression is differentially regulated in pepper accession PB2013071 upon infestation with these M. persicae populations. The NL population induced ROS production genes, while the SW population induced ROS scavenging genes and repressed ROS production genes. We also found that the SW population can induce the removal of ROS which accumulated in response to preinfestion with the NL population, and that preinfestation with the SW population significantly improved the performance of the NL population. This paper supports the hypothesis that M. persicae can overcome the resistance in accession PB2013071 probably because of its ability to manipulate plant defense response especially the ROS metabolism and such ability may benefit avirulent conspecific aphids.
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Affiliation(s)
- Mengjing Sun
- Plant Breeding, Wageningen University & Research, P.O. Box 386, 6700 AJ Wageningen, Netherlands
| | - Roeland E. Voorrips
- Plant Breeding, Wageningen University & Research, P.O. Box 386, 6700 AJ Wageningen, Netherlands
| | - Martijn van Kaauwen
- Plant Breeding, Wageningen University & Research, P.O. Box 386, 6700 AJ Wageningen, Netherlands
| | - Richard G. F. Visser
- Plant Breeding, Wageningen University & Research, P.O. Box 386, 6700 AJ Wageningen, Netherlands
| | - Ben Vosman
- Plant Breeding, Wageningen University & Research, P.O. Box 386, 6700 AJ Wageningen, Netherlands
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13
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Kamphuis LG, Klingler JP, Jacques S, Gao LL, Edwards OR, Singh KB. Additive and epistatic interactions between AKR and AIN loci conferring bluegreen aphid resistance and hypersensitivity in Medicago truncatula. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:4887-4902. [PMID: 31087095 PMCID: PMC6760273 DOI: 10.1093/jxb/erz222] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/10/2018] [Accepted: 05/02/2019] [Indexed: 06/09/2023]
Abstract
Aphids, including the bluegreen aphid (BGA; Acyrthosiphon kondoi), are important pests in agriculture. Two BGA resistance genes have been identified in the model legume Medicago truncatula, namely AKR (Acyrthosiphon kondoi resistance) and AIN (Acyrthosiphon induced necrosis). In this study, progeny derived from a cross between a resistant accession named Jester and a highly susceptible accession named A20 were used to study the interaction between the AKR and AIN loci with respect to BGA performance and plant response to BGA infestation. These studies demonstrated that AKR and AIN have additive effects on the BGA resistance phenotype. However, AKR exerts dominant suppression epistasis on AIN-controlled macroscopic necrotic lesions. Nevertheless, both AKR and AIN condition production of H2O2 at the BGA feeding site. Electrical penetration graph analysis demonstrated that AKR prevents phloem sap ingestion, irrespective of the presence of AIN. Similarly, the jasmonic acid defense signaling pathway is recruited by AKR, irrespective of AIN. This research identifies an enhancement of aphid resistance through gene stacking, and insights into the interaction of distinct resistance genes against insect pests.
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Affiliation(s)
- Lars G Kamphuis
- CSIRO Agriculture and Food, Floreat, Australia
- UWA Institute of Agriculture, Crawley, Australia
- Curtin University, Centre for Crop and Disease Management, Bentley, Australia
| | | | - Silke Jacques
- CSIRO Agriculture and Food, Floreat, Australia
- Curtin University, Centre for Crop and Disease Management, Bentley, Australia
| | | | | | - Karam B Singh
- CSIRO Agriculture and Food, Floreat, Australia
- UWA Institute of Agriculture, Crawley, Australia
- Curtin University, Centre for Crop and Disease Management, Bentley, Australia
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14
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Leybourne DJ, Valentine TA, Robertson JAH, Pérez-Fernández E, Main AM, Karley AJ, Bos JIB. Defence gene expression and phloem quality contribute to mesophyll and phloem resistance to aphids in wild barley. JOURNAL OF EXPERIMENTAL BOTANY 2019; 70:4011-4026. [PMID: 31173098 DOI: 10.1093/jxb/erz163] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/20/2018] [Accepted: 03/26/2019] [Indexed: 05/26/2023]
Abstract
Aphids, including the bird cherry-oat aphid (Rhopalosiphum padi), are significant agricultural pests. The wild relative of barley, Hordeum spontaneum 5 (Hsp5), has been described to be partially resistant to R. padi, with this resistance proposed to involve higher thionin and lipoxygenase gene expression. However, the specificity of this resistance to aphids and its underlying mechanistic processes are unknown. In this study, we assessed the specificity of Hsp5 resistance to aphids and analysed differences in aphid probing and feeding behaviour on Hsp5 and a susceptible barley cultivar (Concerto). We found that partial resistance in Hsp5 to R. padi extends to two other aphid pests of grasses. Using the electrical penetration graph technique, we show that partial resistance is mediated by phloem- and mesophyll-based resistance factors that limit aphid phloem ingestion. To gain insight into plant traits responsible for partial resistance, we compared non-glandular trichome density, defence gene expression, and phloem composition of Hsp5 with those of the susceptible barley cultivar Concerto. We show that Hsp5 partial resistance involves elevated basal expression of thionin and phytohormone signalling genes, and a reduction in phloem quality. This study highlights plant traits that may contribute to broad-spectrum partial resistance to aphids in barley.
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Affiliation(s)
- Daniel J Leybourne
- Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee, UK
- Cell and Molecular Sciences, the James Hutton Institute, Invergowrie, Dundee, UK
- Ecological Sciences, the James Hutton Institute, Invergowrie, Dundee, UK
| | - Tracy A Valentine
- Ecological Sciences, the James Hutton Institute, Invergowrie, Dundee, UK
| | - Jean A H Robertson
- Environmental and Biochemical Sciences, the James Hutton Institute, Cragiebuckler, Aberdeen, UK
| | | | - Angela M Main
- Environmental and Biochemical Sciences, the James Hutton Institute, Cragiebuckler, Aberdeen, UK
| | - Alison J Karley
- Ecological Sciences, the James Hutton Institute, Invergowrie, Dundee, UK
| | - Jorunn I B Bos
- Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee, UK
- Cell and Molecular Sciences, the James Hutton Institute, Invergowrie, Dundee, UK
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15
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Zhu C, Shi F, Chen Y, Wang M, Zhao Y, Geng G. Transcriptome Analysis of Chinese Chestnut ( Castanea mollissima Blume) in Response to Dryocosmus kuriphilus Yasumatsu Infestation. Int J Mol Sci 2019; 20:ijms20040855. [PMID: 30781446 PMCID: PMC6412832 DOI: 10.3390/ijms20040855] [Citation(s) in RCA: 12] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/14/2019] [Revised: 02/01/2019] [Accepted: 02/10/2019] [Indexed: 12/28/2022] Open
Abstract
Chinese chestnut (Castanea mollissima Blume) can be infested by Dryocosmus kuriphilus Yasumatsu, resulting in gall formation and yield losses. Research on the control of gall wasps using genomics approaches is rarely reported. We used RNA-seq to investigate the dynamic changes in the genes of a chestnut species (C. mollissima B.) during four gall-formation stages caused by D. kuriphilus. A total of 21,306 genes were annotated by BLAST in databases. Transcriptome comparison between different gall-formation stages revealed many genes that were differentially expressed compared to the control. Among these, 2410, 7373, 6294, and 9412 genes were differentially expressed in four gall-formation stages: initiation stage (A), early growth stage (B), late growth stage (C), and maturation stage (D), respectively. Annotation analysis indicated that many metabolic processes (e.g., phenylpropanoid biosynthesis, secondary metabolism, plant⁻pathogen interaction) were affected. Interesting genes encoding putative components of signal transduction, stress response, and transcription factors were also differentially regulated. These genes might play important roles in response to D. kuriphilus gall formation. These new data on the mechanism by which D. kuriphilus infests chestnuts could help improve chestnut resistance.
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Affiliation(s)
- Cancan Zhu
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing 210014, China.
| | - Fenghou Shi
- College of Forestry, Nanjing Forestry University, Nanjing 210037, China.
| | - Yu Chen
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing 210014, China.
| | - Min Wang
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing 210014, China.
| | - Yuqiang Zhao
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing 210014, China.
| | - Guomin Geng
- Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing 210014, China.
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16
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Huang X, Liu D, Zhang R, Shi X. Transcriptional Responses in Defense-Related Genes of Sitobion avenae (Hemiptera: Aphididae) Feeding on Wheat and Barley. JOURNAL OF ECONOMIC ENTOMOLOGY 2019; 112:382-395. [PMID: 30339225 DOI: 10.1093/jee/toy329] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/27/2018] [Indexed: 06/08/2023]
Abstract
Many aphids can adapt on plants of differential resistance levels, but molecular interactions underlying host plant utilization and shift of aphids are still not well understood. Here, we sequenced the transcriptome and compared global gene expression profiles of Sitobion avenae (Fabricius) feeding on wheat (i.e., the susceptible plant) and barley (i.e., the resistant plant). In total, 65,200 high-quality unigenes were identified from the merged transcriptomes, and 861 of them were differentially expressed. Relative to their expression on barley, all differentially expressed P450 (cytochrome 450 monooxygenase) genes (e.g., SavCYP6A13, SavCYP4C1, and SavCYP4G15) in S. avenae on wheat were upregulated, suggesting the significance of P450s in xenobiotic metabolism for this aphid on wheat. For S. avenae on barley, some genes encoding for ATP-binding cassette (ABC) transporters (e.g., ABCG1, ABCG4, ABCB7, and ABCA5) and UDP-glucuronosyltransferases (UGTs; e.g., UGT2B1 and UGT2C1) showed a dramatic increase in expression, suggesting that ABC transporters and UGTs could be critical for detoxification metabolism in S. avenae on barley. In addition, the expression for nearly all differentially expressed proteases was upregulated for S. avenae on barley, reflecting xenobiotic challenges facing S. avenae on resistant barley. Thus, various detoxification and other defense-related genes (e.g., proteases and oxidases) showed highly inducible transcript regulation, suggesting great adaptive potential for S. avenae on different plants. All the abovementioned genes will be prime candidates for further studies of molecular interactions underlying host plant use and specialization in this aphid. Our results provide insights into aphids' defenses against variable phytochemicals, and the molecular basis underlying aphid-plant interactions as well.
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Affiliation(s)
- Xianliang Huang
- State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, Shaanxi, China
- College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, China
| | - Deguang Liu
- State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, Shaanxi, China
- College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, China
| | - Rongfang Zhang
- State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, Shaanxi, China
- College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, China
| | - Xiaoqin Shi
- State Key Laboratory of Crop Stress Biology for Arid Areas, Northwest A&F University, Yangling, Shaanxi, China
- College of Plant Protection, Northwest A&F University, Yangling, Shaanxi, China
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17
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Åhman I, Kim SY, Zhu LH. Plant Genes Benefitting Aphids-Potential for Exploitation in Resistance Breeding. FRONTIERS IN PLANT SCIENCE 2019; 10:1452. [PMID: 31798609 PMCID: PMC6874142 DOI: 10.3389/fpls.2019.01452] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2019] [Accepted: 10/18/2019] [Indexed: 05/17/2023]
Abstract
Aphids are phloem sap-feeding insects common as pests in various crops. Here we review 62 omics studies of aphid/plant interactions to search for indications of how aphids may manipulate the plants to make them more suitable as hosts, i.e. more susceptible. Our aim is to try to reveal host plant susceptibility (S) genes, knowledge which can be exploited for making a plant more resistant to its pest by using new plant breeding techniques to knock out or down such S genes. S genes may be of two types, those that are involved in reducing functional plant defense and those involved in further increasing plant factors that are positive to the aphid, such as facilitated access to food or improved nutritional quality. Approximately 40% of the omics studies we have reviewed indicate how aphids may modify their host to their advantage. To exploit knowledge obtained so far, we suggest knocking out/down candidate aphid S genes using CRISPR/Cas9 or RNAi techniques in crops to evaluate if this will be sufficient to keep the aphid pest at economically viable levels without severe pleiotropic effects. As a complement, we also propose functional studies of recessively inherited resistance previously discovered in some aphid-crop combinations, to potentially identify new types of S genes that later could be knocked out or down also in other crops to improve their resistance to aphids.
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18
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Boonpa K, Tantong S, Weerawanich K, Panpetch P, Pringsulaka O, Roytrakul S, Sirikantaramas S. In Silico Analyses of Rice Thionin Genes and the Antimicrobial Activity of OsTHION15 Against Phytopathogens. PHYTOPATHOLOGY 2019; 109:27-35. [PMID: 30028233 DOI: 10.1094/phyto-06-17-0217-r] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
Thionins are a family of antimicrobial peptides. We performed in silico expression analyses of the 44 rice (Oryza sativa) thionins (OsTHIONs). Modulated expression levels of OsTHIONs under different treatments suggest their involvement in many processes, including biotic, abiotic, and nutritional stress responses, and in hormone signaling. OsTHION15 (LOC_Os06g32600) was selected for further characterization based on several in silico analyses. OsTHION15 in O. sativa subsp. indica 'KDML 105' was expressed in all of the tissues and organs examined, including germinating seed, leaves, and roots of seedlings and mature plants, and inflorescences. To investigate the antimicrobial activity of OsTHION15, we produced a recombinant peptide in Escherichia coli Rosetta-gami (DE3). The recombinant OsTHION15 exhibited inhibitory activities toward rice-pathogenic bacteria such as Xanthomonas oryzae pv. oryzae and Pectobacterium carotovorum pv. atroseptica, with minimum inhibitory concentrations of 112.6 and 14.1 µg ml-1, respectively. A significant hyphal growth inhibition was also observed toward Fusarium oxysporum f. sp. cubense and Helminthosporium oryzae. In addition, we demonstrated the in planta antibacterial activity of this peptide in Nicotiana benthamiana against X. campestris pv. glycines. These activities suggest the possible application of OsTHION15 in plant disease control.
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Affiliation(s)
- Krissana Boonpa
- First author: Biotechnology Program, and second, third, fourth, and seventh authors: Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand; fifth author: Department of Microbiology, Faculty of Science, Srinakharinwirot University, Bangkok 10110, Thailand; sixth author: Genome Technology Research Unit, National Center for Genetic Engineering and Biotechnology, Klong Luang, Pathumthani, 12120, Thailand; and seventh author: Natural Product Biotechnology Research Unit, Chulalongkorn University
| | - Suparuk Tantong
- First author: Biotechnology Program, and second, third, fourth, and seventh authors: Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand; fifth author: Department of Microbiology, Faculty of Science, Srinakharinwirot University, Bangkok 10110, Thailand; sixth author: Genome Technology Research Unit, National Center for Genetic Engineering and Biotechnology, Klong Luang, Pathumthani, 12120, Thailand; and seventh author: Natural Product Biotechnology Research Unit, Chulalongkorn University
| | - Kamonwan Weerawanich
- First author: Biotechnology Program, and second, third, fourth, and seventh authors: Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand; fifth author: Department of Microbiology, Faculty of Science, Srinakharinwirot University, Bangkok 10110, Thailand; sixth author: Genome Technology Research Unit, National Center for Genetic Engineering and Biotechnology, Klong Luang, Pathumthani, 12120, Thailand; and seventh author: Natural Product Biotechnology Research Unit, Chulalongkorn University
| | - Pawinee Panpetch
- First author: Biotechnology Program, and second, third, fourth, and seventh authors: Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand; fifth author: Department of Microbiology, Faculty of Science, Srinakharinwirot University, Bangkok 10110, Thailand; sixth author: Genome Technology Research Unit, National Center for Genetic Engineering and Biotechnology, Klong Luang, Pathumthani, 12120, Thailand; and seventh author: Natural Product Biotechnology Research Unit, Chulalongkorn University
| | - Onanong Pringsulaka
- First author: Biotechnology Program, and second, third, fourth, and seventh authors: Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand; fifth author: Department of Microbiology, Faculty of Science, Srinakharinwirot University, Bangkok 10110, Thailand; sixth author: Genome Technology Research Unit, National Center for Genetic Engineering and Biotechnology, Klong Luang, Pathumthani, 12120, Thailand; and seventh author: Natural Product Biotechnology Research Unit, Chulalongkorn University
| | - Sittiruk Roytrakul
- First author: Biotechnology Program, and second, third, fourth, and seventh authors: Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand; fifth author: Department of Microbiology, Faculty of Science, Srinakharinwirot University, Bangkok 10110, Thailand; sixth author: Genome Technology Research Unit, National Center for Genetic Engineering and Biotechnology, Klong Luang, Pathumthani, 12120, Thailand; and seventh author: Natural Product Biotechnology Research Unit, Chulalongkorn University
| | - Supaart Sirikantaramas
- First author: Biotechnology Program, and second, third, fourth, and seventh authors: Department of Biochemistry, Faculty of Science, Chulalongkorn University, Bangkok 10330, Thailand; fifth author: Department of Microbiology, Faculty of Science, Srinakharinwirot University, Bangkok 10110, Thailand; sixth author: Genome Technology Research Unit, National Center for Genetic Engineering and Biotechnology, Klong Luang, Pathumthani, 12120, Thailand; and seventh author: Natural Product Biotechnology Research Unit, Chulalongkorn University
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19
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Thorpe P, Escudero-Martinez CM, Cock PJA, Eves-van den Akker S, Bos JIB. Shared Transcriptional Control and Disparate Gain and Loss of Aphid Parasitism Genes. Genome Biol Evol 2018; 10:2716-2733. [PMID: 30165560 PMCID: PMC6186164 DOI: 10.1093/gbe/evy183] [Citation(s) in RCA: 36] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/23/2018] [Indexed: 12/27/2022] Open
Abstract
Aphids are a diverse group of taxa that contain agronomically important species, which vary in their host range and ability to infest crop plants. The genome evolution underlying agriculturally important aphid traits is not well understood. We generated draft genome assemblies for two aphid species: Myzus cerasi (black cherry aphid) and the cereal specialist Rhopalosiphum padi. Using a de novo gene prediction pipeline on both these, and three additional aphid genome assemblies (Acyrthosiphon pisum, Diuraphis noxia, and Myzus persicae), we show that aphid genomes consistently encode similar gene numbers. We compare gene content, gene duplication, synteny, and putative effector repertoires between these five species to understand the genome evolution of globally important plant parasites. Aphid genomes show signs of relatively distant gene duplication, and substantial, relatively recent, gene birth. Putative effector repertoires, originating from duplicated and other loci, have an unusual genomic organization and evolutionary history. We identify a highly conserved effector pair that is tightly physically linked in the genomes of all aphid species tested. In R. padi, this effector pair is tightly transcriptionally linked and shares an unknown transcriptional control mechanism with a subset of ∼50 other putative effectors and secretory proteins. This study extends our current knowledge on the evolution of aphid genomes and reveals evidence for an as-of-yet unknown shared control mechanism, which underlies effector expression, and ultimately plant parasitism.
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Affiliation(s)
- Peter Thorpe
- Cell and Molecular Sciences, The James Hutton Institute, Dundee, United Kingdom
- Dundee Effector Consortium, The James Hutton Institute, Dundee, United Kingdom
| | - Carmen M Escudero-Martinez
- Cell and Molecular Sciences, The James Hutton Institute, Dundee, United Kingdom
- Dundee Effector Consortium, The James Hutton Institute, Dundee, United Kingdom
| | - Peter J A Cock
- Dundee Effector Consortium, The James Hutton Institute, Dundee, United Kingdom
- Information and Computational Sciences, The James Hutton Institute, Dundee, United Kingdom
| | - Sebastian Eves-van den Akker
- Department of Plant Sciences, University of Cambridge, Cambridge, United Kingdom
- Corresponding authors: E-mails: ;
| | - Jorunn I B Bos
- Cell and Molecular Sciences, The James Hutton Institute, Dundee, United Kingdom
- Dundee Effector Consortium, The James Hutton Institute, Dundee, United Kingdom
- Division of Plant Sciences, School of Life Sciences, University of Dundee, Dundee, United Kingdom
- Corresponding authors: E-mails: ;
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20
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Odintsova TI, Slezina MP, Istomina EA. Plant thionins: structure, biological functions and potential use in biotechnology. Vavilovskii Zhurnal Genet Selektsii 2018. [DOI: 10.18699/vj18.409] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/19/2022] Open
Abstract
Antimicrobial peptides (AMPs) are important components of defense system in both plants and animals. They represent an ancient mechanism of innate immunity providing rapid first line of defense against pathogens. Plant AMPs are classified into several families: thionins, defensins, nonspecific lipid-transfer proteins, hevein- and knottin-type peptides, hairpinins and macrocyclic peptides (cyclotides). The review focuses on the thionin family. Thionins comprise a plant-specific AMP family that consists of short (~5 kDA) cysteine-rich peptides containing 6 or 8 cysteine residues with antimicrobial and toxic properties. Based on similarity in amino acid sequences and the arrangement of disulphide bonds, five structural classes of thionins are discriminated. The three-dimensional structures of a number of thionins were determined. The amphipathic thionin molecule resembles the Greek letter Г, in which the long arm is formed by two antiparallel α-helices, while the short one, by two parallel β-strands. The residues responsible for the antimicrobial activity of thionins were identified. Thionins are synthesized as precursor proteins consisting of a signal peptide, the mature peptide region and the C-terminal prodomain. Thionins protect plants from pathogenic bacteria and fungi acting directly on the membranes of microorganisms at micromolar concentrations, although their precise mode of action remains unclear. In addition to plant pathogens, thionins inhibit growth of a number of human pathogens and opportunistic microorganisms, such as Candida spp., Saccharomyces cerevisiae, Fusarium solani, Staphylococcus aureus and Escherichia coli. Thionins are toxic to different types of cells including mammalian cancer cell lines. Transgenic plants expressing thionin genes display enhanced resistance to pathogens. A wide range of biological activities makes thionins promising candidates for practical application in agriculture and medicine.
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21
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Santamaria ME, Diaz I, Martinez M. Dehydration Stress Contributes to the Enhancement of Plant Defense Response and Mite Performance on Barley. FRONTIERS IN PLANT SCIENCE 2018; 9:458. [PMID: 29681917 PMCID: PMC5898276 DOI: 10.3389/fpls.2018.00458] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2018] [Accepted: 03/22/2018] [Indexed: 05/26/2023]
Abstract
Under natural conditions, plants suffer different stresses simultaneously or in a sequential way. At present, the combined effect of biotic and abiotic stressors is one of the most important threats to crop production. Understanding how plants deal with the panoply of potential stresses affecting them is crucial to develop biotechnological tools to protect plants. As well as for drought stress, the economic importance of the spider mite on agriculture is expected to increase due to climate change. Barley is a host of the polyphagous spider mite Tetranychus urticae and drought produces important yield losses. To obtain insights on the combined effect of drought and mite stresses on the defensive response of this cereal, we have analyzed the transcriptomic responses of barley plants subjected to dehydration (water-deficit) treatment, spider mite attack, or to the combined dehydration-spider mite stress. The expression patterns of mite-induced responsive genes included many jasmonic acid responsive genes and were quickly induced. In contrast, genes related to dehydration tolerance were later up-regulated. Besides, a higher up-regulation of mite-induced defenses was showed by the combined dehydration and mite treatment than by the individual mite stress. On the other hand, the performance of the mite in dehydration stressed and well-watered plants was tested. Despite the stronger defensive response in plants that suffer dehydration and mite stresses, the spider mite demonstrates a better performance under dehydration condition than in well-watered plants. These results highlight the complexity of the regulatory events leading to the response to a combination of stresses and emphasize the difficulties to predict their consequences on crop production.
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Affiliation(s)
- M. E. Santamaria
- Centro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Universidad Politécnica de Madrid, Madrid, Spain
- Departamento de Biotecnología-Biología Vegetal, Escuela Técnica Superior de Ingeniería Agronómica, Alimentaria y de Biosistemas, Universidad Politécnica de Madrid, Madrid, Spain
| | - Isabel Diaz
- Centro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Universidad Politécnica de Madrid, Madrid, Spain
- Departamento de Biotecnología-Biología Vegetal, Escuela Técnica Superior de Ingeniería Agronómica, Alimentaria y de Biosistemas, Universidad Politécnica de Madrid, Madrid, Spain
| | - Manuel Martinez
- Centro de Biotecnología y Genómica de Plantas, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria, Universidad Politécnica de Madrid, Madrid, Spain
- Departamento de Biotecnología-Biología Vegetal, Escuela Técnica Superior de Ingeniería Agronómica, Alimentaria y de Biosistemas, Universidad Politécnica de Madrid, Madrid, Spain
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