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Tang J, Feng M, Wang D, Zhang L, Yang K. Recent advancement of sonogenetics: A promising noninvasive cellular manipulation by ultrasound. Genes Dis 2024; 11:101112. [PMID: 38947740 PMCID: PMC11214298 DOI: 10.1016/j.gendis.2023.101112] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2023] [Revised: 07/19/2023] [Accepted: 07/24/2023] [Indexed: 07/02/2024] Open
Abstract
Recent advancements in biomedical research have underscored the importance of noninvasive cellular manipulation techniques. Sonogenetics, a method that uses genetic engineering to produce ultrasound-sensitive proteins in target cells, is gaining prominence along with optogenetics, electrogenetics, and magnetogenetics. Upon stimulation with ultrasound, these proteins trigger a cascade of cellular activities and functions. Unlike traditional ultrasound modalities, sonogenetics offers enhanced spatial selectivity, improving precision and safety in disease treatment. This technology broadens the scope of non-surgical interventions across a wide range of clinical research and therapeutic applications, including neuromodulation, oncologic treatments, stem cell therapy, and beyond. Although current literature predominantly emphasizes ultrasonic neuromodulation, this review offers a comprehensive exploration of sonogenetics. We discuss ultrasound properties, the specific ultrasound-sensitive proteins employed in sonogenetics, and the technique's potential in managing conditions such as neurological disorders, cancer, and ophthalmic diseases, and in stem cell therapies. Our objective is to stimulate fresh perspectives for further research in this promising field.
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Affiliation(s)
- Jin Tang
- Pediatric Research Institute, Children's Hospital of Chongqing Medical University, National Clinical Research Center for Child Health and Disorders, Ministry of Education Key Laboratory of Child Development and Disorders, China International Science and Technology Cooperation Base of Child Development and Critical Disorders, Chongqing Engineering Research Center of Stem Cell Therapy, Chongqing 400014, China
- Department of Ultrasound, The First Affiliated Hospital of Chongqing Medical University, Chongqing 400016, China
| | - Mingxuan Feng
- Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei 430074, China
| | - Dong Wang
- Department of Ultrasound, The First Affiliated Hospital of Chongqing Medical University, Chongqing 400016, China
| | - Liang Zhang
- Department of Ultrasound, The First Affiliated Hospital of Chongqing Medical University, Chongqing 400016, China
| | - Ke Yang
- Pediatric Research Institute, Children's Hospital of Chongqing Medical University, National Clinical Research Center for Child Health and Disorders, Ministry of Education Key Laboratory of Child Development and Disorders, China International Science and Technology Cooperation Base of Child Development and Critical Disorders, Chongqing Engineering Research Center of Stem Cell Therapy, Chongqing 400014, China
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2
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Quan J, Yan H, Periyasami G, Li H. A Visible-Light Regulated ATP Transport in Retinal-Modified Pillar[6]arene Layer-by-Layer Self-Assembled Sub-Nanochannel. Chemistry 2024; 30:e202401045. [PMID: 38693094 DOI: 10.1002/chem.202401045] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2024] [Revised: 04/16/2024] [Accepted: 04/29/2024] [Indexed: 05/03/2024]
Abstract
Natural light-responsive rhodopsins play a critical role in visual conversion, signal transduction, energy transmission, etc., which has aroused extensive interest in the past decade. Inspired by these gorgeous works of living beings, scientists have constructed various biomimetic light-responsive nanochannels to mimic the behaviors of rhodopsins. However, it is still challenging to build stimuli-responsive sub-nanochannels only regulated by visible light as the rhodopsins are always at the sub-nanometer level and regulated by visible light. Pillar[6]arenes have an open cavity of 6.7 Å, which can selectively recognize small organic molecules. They can be connected to ions of ammonium or carboxylate groups on the rims. Therefore, we designed and synthesized the amino and carboxyl-derived side chains of pillar[6]arenes with opposite charges. The sub-nanochannels were constructed through the electrostatic interaction of layer-by-layer self-assembled amino and carboxyl-derived pillar[6]arenes. Then, the natural chromophore of the retinal with visible light-responsive performance was modified on the upper edge of the sub-nanochannel to realize the visible light switched on and off. Finally, we successfully constructed a visible light-responsive sub-nanochannel, providing a novel method for regulating the selective transport of energy-donating molecules of ATP.
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Affiliation(s)
- Jiaxin Quan
- Department of Chemistry and Environmental Engineering, Hanjiang Normal University, Shiyan, 442000, China
| | - Hewei Yan
- Key Laboratory of Jiangxi Province for Persistent Pollutants Control and Resources Recycle, Nanchang Hangkong University, Nanchang, 330063, P.R. China
| | - Govindasami Periyasami
- Department of Chemistry, College of Science, King Saud University, P.O.Box 2455, Riyadh, 11451, Saudi Arabia
| | - Haibing Li
- National Key Laboratory of Green Pesticide, College of Chemistry, Central China Normal University, Wuhan, 430079, P.R. China
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3
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Rathee P, Edelstein-Pardo N, Koren G, Beck R, Amir RJ. Cascade Mesophase Transitions of Multi-enzyme Responsive Polymeric Formulations. Biomacromolecules 2024; 25:3607-3619. [PMID: 38776179 PMCID: PMC11170936 DOI: 10.1021/acs.biomac.4c00221] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2024] [Revised: 05/07/2024] [Accepted: 05/07/2024] [Indexed: 05/24/2024]
Abstract
Studying how synthetic polymer assemblies respond to sequential enzymatic stimuli can uncover intricate interactions in biological systems. Using amidase- and esterase-responsive PEG-based diblock (DBA) and triblock amphiphiles (TBAs), we created two distinct formulations: amidase-responsive DBA with esterase-responsive TBA and vice versa. We studied their cascade responses to the two enzymes and the sequence of their introduction. These formulations underwent cascade mesophase transitions upon the addition of the DBA-degrading enzyme, transitioning from (i) coassembled micelles to (ii) triblock-based hydrogel, and ultimately to (iii) dissolved polymers when exposed to the TBA hydrolyzing enzyme. The specific pathway of the two mesophase transitions depended on the compositions of the formulations and the enzyme introduction sequence. The results highlight the potential for designing polymeric formulations with programmable multistep enzymatic responses, mimicking the complex behavior of biological macromolecules.
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Affiliation(s)
- Parul Rathee
- School
of Chemistry, Faculty of Exact Sciences, Tel-Aviv University, Tel-Aviv 6997801, Israel
- The
Center for Physics and Chemistry of Living Systems, Tel-Aviv University, Tel Aviv 6997801, Israel
- Center
for Nanoscience and Nanotechnology, Tel-Aviv
University, Tel Aviv 6997801, Israel
| | - Nicole Edelstein-Pardo
- School
of Chemistry, Faculty of Exact Sciences, Tel-Aviv University, Tel-Aviv 6997801, Israel
- The
Center for Physics and Chemistry of Living Systems, Tel-Aviv University, Tel Aviv 6997801, Israel
- Center
for Nanoscience and Nanotechnology, Tel-Aviv
University, Tel Aviv 6997801, Israel
| | - Gil Koren
- The
Center for Physics and Chemistry of Living Systems, Tel-Aviv University, Tel Aviv 6997801, Israel
- Center
for Nanoscience and Nanotechnology, Tel-Aviv
University, Tel Aviv 6997801, Israel
- School
of Physics and Astronomy, Faculty of Exact Sciences, Tel-Aviv University, Tel-Aviv 6997801, Israel
| | - Roy Beck
- The
Center for Physics and Chemistry of Living Systems, Tel-Aviv University, Tel Aviv 6997801, Israel
- Center
for Nanoscience and Nanotechnology, Tel-Aviv
University, Tel Aviv 6997801, Israel
- School
of Physics and Astronomy, Faculty of Exact Sciences, Tel-Aviv University, Tel-Aviv 6997801, Israel
| | - Roey J. Amir
- School
of Chemistry, Faculty of Exact Sciences, Tel-Aviv University, Tel-Aviv 6997801, Israel
- The
Center for Physics and Chemistry of Living Systems, Tel-Aviv University, Tel Aviv 6997801, Israel
- Center
for Nanoscience and Nanotechnology, Tel-Aviv
University, Tel Aviv 6997801, Israel
- ADAMA
Center for Novel Delivery Systems in Crop Protection, Tel-Aviv University, Tel Aviv 6997801, Israel
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4
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Ghazal SA, Tabbalat SW, Gándara F, Al-Ghourani A, Abusulieh SM, Abdellatief M, Sunoqrot S, Cordova KE. A Hydrogen-Bonded Organic Framework Equipped with a Molecular Nanovalve. ACS APPLIED MATERIALS & INTERFACES 2024; 16:16522-16531. [PMID: 38529914 DOI: 10.1021/acsami.4c01171] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/27/2024]
Abstract
The concept of a molecular nanovalve is applied to a synthesized biocompatible hydrogen-bonded organic framework (HOF), termed RSS-140, to load, trap, and subsequently release an antioxidant on command. Specifically, we exploit the pore windows of RSS-140 (i.e., β-CD cavities) to first load and trap the antioxidant, Trolox, within the internal pores of the HOF (Trolox⊂RSS-140) and, to prevent it from leaching, utilize supramolecular chemistry to complex azobenzene (Azo) with β-CD (Trolox⊂Azo@RSS-140). The molecular nanovalve is fully realized upon exposing Trolox⊂Azo@RSS-140 to UV light with a specific wavelength, which induces Azo isomerization, Azo decomplexation from β-CD, and subsequent release of Trolox from the pores of RSS-140. The biocompatibility and nontoxicity of Trolox⊂Azo@RSS-140, together with the absolute control over the nanovalve opening, were established to yield a system that safely and slowly releases Trolox for longer-lasting antioxidant efficacy. As the field of supramolecular chemistry is rich with similar systems and many such systems can be used as building blocks to construct HOFs or other extended framework materials, we envision the molecular nanovalve concept to be applied widely for controllably delivering molecular cargo for diverse applications.
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Affiliation(s)
- Sara A Ghazal
- Integrated Materials Systems Research Unit, Advanced Research Centre, Royal Scientific Society, Amman 11941, Jordan
| | - Sarah W Tabbalat
- Integrated Materials Systems Research Unit, Advanced Research Centre, Royal Scientific Society, Amman 11941, Jordan
| | - Felipe Gándara
- Materials Science Institute of Madrid, Consejo Superior de Investigaciones Cientificas, Madrid 28049, Spain
| | - Ala'a Al-Ghourani
- Integrated Materials Systems Research Unit, Advanced Research Centre, Royal Scientific Society, Amman 11941, Jordan
| | - Samah M Abusulieh
- Faculty of Pharmacy, Al-Zaytoonah University of Jordan, Amman 11733, Jordan
| | - Mahmoud Abdellatief
- Synchrotron-light for Experimental Science and Applications in the Middle East (SESAME), Allan 19252, Jordan
| | - Suhair Sunoqrot
- Faculty of Pharmacy, Al-Zaytoonah University of Jordan, Amman 11733, Jordan
| | - Kyle E Cordova
- Integrated Materials Systems Research Unit, Advanced Research Centre, Royal Scientific Society, Amman 11941, Jordan
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5
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Zhang M, Tang S, Wang X, Fang S, Li Y. Mechanosensitive channel MscL gating transitions coupling with constriction point shift. Protein Sci 2024; 33:e4965. [PMID: 38501596 PMCID: PMC10949393 DOI: 10.1002/pro.4965] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Revised: 02/23/2024] [Accepted: 03/04/2024] [Indexed: 03/20/2024]
Abstract
The mechanosensitive channel of large conductance (MscL) acts as an "emergency release valve" that protects bacterial cells from acute hypoosmotic stress, and it serves as a paradigm for studying the mechanism underlying the transduction of mechanical forces. MscL gating is proposed to initiate with an expansion without opening, followed by subsequent pore opening via a number of intermediate substates, and ends in a full opening. However, the details of gating process are still largely unknown. Using in vivo viability assay, single channel patch clamp recording, cysteine cross-linking, and tryptophan fluorescence quenching approach, we identified and characterized MscL mutants with different occupancies of constriction region in the pore domain. The results demonstrated the shifts of constriction point along the gating pathway towards cytoplasic side from residue G26, though G22, to L19 upon gating, indicating the closed-expanded transitions coupling of the expansion of tightly packed hydrophobic constriction region to conduct the initial ion permeation in response to the membrane tension. Furthermore, these transitions were regulated by the hydrophobic and lipidic interaction with the constricting "hot spots". Our data reveal a new resolution of the transitions from the closed to the opening substate of MscL, providing insights into the gating mechanisms of MscL.
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Affiliation(s)
- Mingfeng Zhang
- Department of Cell Biology, College of MedicineJiaxing UniversityJiaxingChina
- School of Life ScienceWestlake UniversityHangzhouChina
- School of Brain Science and Brain MedicineZhejiang University School of MedicineHangzhouChina
| | - Siyang Tang
- School of Brain Science and Brain MedicineZhejiang University School of MedicineHangzhouChina
| | - Xiaomin Wang
- Department of Cell Biology, College of MedicineJiaxing UniversityJiaxingChina
| | - Sanhua Fang
- Core FacilitiesZhejiang University School of MedicineHangzhouChina
| | - Yuezhou Li
- Department of Cell Biology, College of MedicineJiaxing UniversityJiaxingChina
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6
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Qutbuddin Y, Guinart A, Gavrilović S, Al Nahas K, Feringa BL, Schwille P. Light-Activated Synthetic Rotary Motors in Lipid Membranes Induce Shape Changes Through Membrane Expansion. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2024; 36:e2311176. [PMID: 38215457 DOI: 10.1002/adma.202311176] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Revised: 12/16/2023] [Indexed: 01/14/2024]
Abstract
Membranes are the key structures to separate and spatially organize cellular systems. Their rich dynamics and transformations during the cell cycle are orchestrated by specific membrane-targeted molecular machineries, many of which operate through energy dissipation. Likewise, man-made light-activated molecular rotary motors have previously shown drastic effects on cellular systems, but their physical roles on and within lipid membranes remain largely unexplored. Here, the impact of rotary motors on well-defined biological membranes is systematically investigated. Notably, dramatic mechanical transformations are observed in these systems upon motor irradiation, indicative of motor-induced membrane expansion. The influence of several factors on this phenomenon is systematically explored, such as motor concentration and membrane composition., Membrane fluidity is found to play a crucial role in motor-induced deformations, while only minor contributions from local heating and singlet oxygen generation are observed. Most remarkably, the membrane area expansion under the influence of the motors continues as long as irradiation is maintained, and the system stays out-of-equilibrium. Overall, this research contributes to a comprehensive understanding of molecular motors interacting with biological membranes, elucidating the multifaceted factors that govern membrane responses and shape transitions in the presence of these remarkable molecular machines, thereby supporting their future applications in chemical biology.
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Affiliation(s)
- Yusuf Qutbuddin
- Cellular and Molecular Biophysics, Max Planck Institute of Biochemistry, 82152, Martinsried, Germany
| | - Ainoa Guinart
- Stratingh Institute for Chemistry, University of Groningen, Groningen, 9747 AG, The Netherlands
| | - Svetozar Gavrilović
- Cellular and Molecular Biophysics, Max Planck Institute of Biochemistry, 82152, Martinsried, Germany
| | - Kareem Al Nahas
- Cellular and Molecular Biophysics, Max Planck Institute of Biochemistry, 82152, Martinsried, Germany
| | - Ben L Feringa
- Stratingh Institute for Chemistry, University of Groningen, Groningen, 9747 AG, The Netherlands
| | - Petra Schwille
- Cellular and Molecular Biophysics, Max Planck Institute of Biochemistry, 82152, Martinsried, Germany
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7
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Liu P, Kong XY, Jiang L, Wen L. Ion transport in nanofluidics under external fields. Chem Soc Rev 2024; 53:2972-3001. [PMID: 38345093 DOI: 10.1039/d3cs00367a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 03/19/2024]
Abstract
Nanofluidic channels with tailored ion transport dynamics are usually used as channels for ion transport, to enable high-performance ion regulation behaviors. The rational construction of nanofluidics and the introduction of external fields are of vital significance to the advancement and development of these ion transport properties. Focusing on the recent advances of nanofluidics, in this review, various dimensional nanomaterials and their derived homogeneous/heterogeneous nanofluidics are first briefly introduced. Then we discuss the basic principles and properties of ion transport in nanofluidics. As the major part of this review, we focus on recent progress in ion transport in nanofluidics regulated by external physical fields (electric field, light, heat, pressure, etc.) and chemical fields (pH, concentration gradient, chemical reaction, etc.), and reveal the advantages and ion regulation mechanisms of each type. Moreover, the representative applications of these nanofluidic channels in sensing, ionic devices, energy conversion, and other areas are summarized. Finally, the major challenges that need to be addressed in this research field and the future perspective of nanofluidics development and practical applications are briefly illustrated.
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Affiliation(s)
- Pei Liu
- Henan Institute of Advanced Technology, Zhengzhou University, Zhengzhou 450052, P. R. China
- College of Materials Science and Engineering, Zhengzhou University, Zhengzhou 450052, P. R. China
| | - Xiang-Yu Kong
- CAS Key Laboratory of Bio-inspired Materials and Interfacial Science, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China.
- School of Future Technology, University of Chinese Academy of Sciences, Beijing 100049, P. R. China
- School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui 230026, P. R. China
- Suzhou Institute for Advanced Research, University of Science and Technology of China, Suzhou, Jiangsu 215123, P. R. China
| | - Lei Jiang
- CAS Key Laboratory of Bio-inspired Materials and Interfacial Science, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China.
- School of Future Technology, University of Chinese Academy of Sciences, Beijing 100049, P. R. China
- School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui 230026, P. R. China
- Suzhou Institute for Advanced Research, University of Science and Technology of China, Suzhou, Jiangsu 215123, P. R. China
- Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, P. R. China
| | - Liping Wen
- CAS Key Laboratory of Bio-inspired Materials and Interfacial Science, Technical Institute of Physics and Chemistry, Chinese Academy of Sciences, Beijing 100190, P. R. China.
- School of Future Technology, University of Chinese Academy of Sciences, Beijing 100049, P. R. China
- School of Chemistry and Materials Science, University of Science and Technology of China, Hefei, Anhui 230026, P. R. China
- Suzhou Institute for Advanced Research, University of Science and Technology of China, Suzhou, Jiangsu 215123, P. R. China
- Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, P. R. China
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8
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Peng Z, Iwabuchi S, Izumi K, Takiguchi S, Yamaji M, Fujita S, Suzuki H, Kambara F, Fukasawa G, Cooney A, Di Michele L, Elani Y, Matsuura T, Kawano R. Lipid vesicle-based molecular robots. LAB ON A CHIP 2024; 24:996-1029. [PMID: 38239102 PMCID: PMC10898420 DOI: 10.1039/d3lc00860f] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/28/2024]
Abstract
A molecular robot, which is a system comprised of one or more molecular machines and computers, can execute sophisticated tasks in many fields that span from nanomedicine to green nanotechnology. The core parts of molecular robots are fairly consistent from system to system and always include (i) a body to encapsulate molecular machines, (ii) sensors to capture signals, (iii) computers to make decisions, and (iv) actuators to perform tasks. This review aims to provide an overview of approaches and considerations to develop molecular robots. We first introduce the basic technologies required for constructing the core parts of molecular robots, describe the recent progress towards achieving higher functionality, and subsequently discuss the current challenges and outlook. We also highlight the applications of molecular robots in sensing biomarkers, signal communications with living cells, and conversion of energy. Although molecular robots are still in their infancy, they will unquestionably initiate massive change in biomedical and environmental technology in the not too distant future.
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Affiliation(s)
- Zugui Peng
- Department of Biotechnology and Life Science, Tokyo University of Agriculture and Technology, 2-24-16 Naka-cho, Koganei-shi, Tokyo185-8588, Japan.
| | - Shoji Iwabuchi
- Department of Biotechnology and Life Science, Tokyo University of Agriculture and Technology, 2-24-16 Naka-cho, Koganei-shi, Tokyo185-8588, Japan.
| | - Kayano Izumi
- Department of Biotechnology and Life Science, Tokyo University of Agriculture and Technology, 2-24-16 Naka-cho, Koganei-shi, Tokyo185-8588, Japan.
| | - Sotaro Takiguchi
- Department of Biotechnology and Life Science, Tokyo University of Agriculture and Technology, 2-24-16 Naka-cho, Koganei-shi, Tokyo185-8588, Japan.
| | - Misa Yamaji
- Department of Biotechnology and Life Science, Tokyo University of Agriculture and Technology, 2-24-16 Naka-cho, Koganei-shi, Tokyo185-8588, Japan.
| | - Shoko Fujita
- Department of Biotechnology and Life Science, Tokyo University of Agriculture and Technology, 2-24-16 Naka-cho, Koganei-shi, Tokyo185-8588, Japan.
| | - Harune Suzuki
- Department of Biotechnology and Life Science, Tokyo University of Agriculture and Technology, 2-24-16 Naka-cho, Koganei-shi, Tokyo185-8588, Japan.
| | - Fumika Kambara
- Department of Biotechnology and Life Science, Tokyo University of Agriculture and Technology, 2-24-16 Naka-cho, Koganei-shi, Tokyo185-8588, Japan.
| | - Genki Fukasawa
- School of Life Science and Technology, Tokyo Institute of Technology, Ookayama 2-12-1, Meguro-Ku, Tokyo 152-8550, Japan
| | - Aileen Cooney
- Department of Chemistry, Molecular Sciences Research Hub, Imperial College London, London W12 0BZ, UK
| | - Lorenzo Di Michele
- Department of Chemical Engineering and Biotechnology, University of Cambridge, Cambridge CB3 0AS, UK
- Department of Chemistry, Molecular Sciences Research Hub, Imperial College London, London W12 0BZ, UK
- FabriCELL, Molecular Sciences Research Hub, Imperial College London, London W12 0BZ, UK
| | - Yuval Elani
- Department of Chemical Engineering, Imperial College London, South Kensington, London SW7 2AZ, UK
- FabriCELL, Molecular Sciences Research Hub, Imperial College London, London W12 0BZ, UK
| | - Tomoaki Matsuura
- Earth-Life Science Institute, Tokyo Institute of Technology, Ookayama 2-12-1, Meguro-Ku, Tokyo 152-8550, Japan
| | - Ryuji Kawano
- Department of Biotechnology and Life Science, Tokyo University of Agriculture and Technology, 2-24-16 Naka-cho, Koganei-shi, Tokyo185-8588, Japan.
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Sheng J, Perego J, Bracco S, Czepa W, Danowski W, Krause S, Sozzani P, Ciesielski A, Comotti A, Feringa BL. Construction of Multi-Stimuli Responsive Highly Porous Switchable Frameworks by In Situ Solid-State Generation of Spiropyran Switches. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2024; 36:e2305783. [PMID: 37643306 DOI: 10.1002/adma.202305783] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/15/2023] [Revised: 08/11/2023] [Indexed: 08/31/2023]
Abstract
Stimuli-responsive molecular systems support within permanently porous materials offer the opportunity to host dynamic functions in multifunctional smart materials. However, the construction of highly porous frameworks featuring external-stimuli responsiveness, for example by light excitation, is still in its infancy. Here a general strategy is presented to construct spiropyran-functionalized highly porous switchable aromatic frameworks by modular and high-precision anchoring of molecular hooks and an innovative in situ solid-state grafting approach. Three spiropyran-grafted frameworks bearing distinct functional groups exhibiting various stimuli-responsiveness are generated by two-step post-solid-state synthesis of a parent indole-based material. The quantitative transformation and preservation of high porosity are demonstrated by spectroscopic and gas adsorption techniques. For the first time, a highly efficient strategy is provided to construct multi-stimuli-responsive, yet structurally robust, spiropyran materials with high pore capacity which is proved essential for the reversible and quantitative isomerization in the bulk as demonstrated by solid-state NMR spectroscopy. The overall strategy allows to construct dynamic materials that undergoes reversible transformation of spiropyran to zwitterionic merocyanine, by chemical and physical stimulation, showing potential for pH active control, responsive gas uptake and release, contaminant removal, and water harvesting.
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Affiliation(s)
- Jinyu Sheng
- Stratingh Institute for Chemistry, University of Groningen, Groningen, the Netherlands. Nijenborgh 4, Groningen, AG, 9747, The Netherlands
| | - Jacopo Perego
- Department of Materials Science, University of Milano Bicocca, Milan, Italy. Via R. Cozzi 55, Milan, 20125, Italy
| | - Silvia Bracco
- Department of Materials Science, University of Milano Bicocca, Milan, Italy. Via R. Cozzi 55, Milan, 20125, Italy
| | - Włodzimierz Czepa
- Faculty of Chemistry, Adam Mickiewicz University, Uniwersytetu Poznańskiego 8, Poznań, 61614, Poland
- Center for Advanced Technologies, Adam Mickiewicz University, Uniwersytetu Poznańskiego 10, Poznań, 61614, Poland
| | - Wojciech Danowski
- Stratingh Institute for Chemistry, University of Groningen, Groningen, the Netherlands. Nijenborgh 4, Groningen, AG, 9747, The Netherlands
- Université de Strasbourg, CNRS, ISIS, 8 allée Gaspard Monge, Strasbourg, 67000, France
| | - Simon Krause
- Stratingh Institute for Chemistry, University of Groningen, Groningen, the Netherlands. Nijenborgh 4, Groningen, AG, 9747, The Netherlands
- Nanochemistry Department, Max Planck Institute for Solid State Research, Heisenbergstr. 1, 70569, Stuttgart, Germany
| | - Piero Sozzani
- Department of Materials Science, University of Milano Bicocca, Milan, Italy. Via R. Cozzi 55, Milan, 20125, Italy
| | - Artur Ciesielski
- Center for Advanced Technologies, Adam Mickiewicz University, Uniwersytetu Poznańskiego 10, Poznań, 61614, Poland
- Université de Strasbourg, CNRS, ISIS, 8 allée Gaspard Monge, Strasbourg, 67000, France
| | - Angiolina Comotti
- Department of Materials Science, University of Milano Bicocca, Milan, Italy. Via R. Cozzi 55, Milan, 20125, Italy
| | - Ben L Feringa
- Stratingh Institute for Chemistry, University of Groningen, Groningen, the Netherlands. Nijenborgh 4, Groningen, AG, 9747, The Netherlands
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10
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Ahmad M, Gartland SA, Langton MJ. Photo- and Redox-Regulated Transmembrane Ion Transporters. Angew Chem Int Ed Engl 2023; 62:e202308842. [PMID: 37478126 DOI: 10.1002/anie.202308842] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/23/2023] [Revised: 07/20/2023] [Accepted: 07/21/2023] [Indexed: 07/23/2023]
Abstract
Synthetic supramolecular ion transporters find applications as potential therapeutics and as tools for engineering functional membranes. Stimuli-responsive systems enable external control over transport, which is necessary for targeted activation. The Minireview provides an overview of current approaches to developing stimuli-responsive ion transport systems, including channels and mobile carriers, that can be controlled using photo or redox inputs.
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Affiliation(s)
- Manzoor Ahmad
- Department of Chemistry, University of Oxford, Chemistry Research Laboratory, Mansfield Road, Oxford, OX1 3TA, UK
| | - Shaun A Gartland
- Department of Chemistry, University of Oxford, Chemistry Research Laboratory, Mansfield Road, Oxford, OX1 3TA, UK
| | - Matthew J Langton
- Department of Chemistry, University of Oxford, Chemistry Research Laboratory, Mansfield Road, Oxford, OX1 3TA, UK
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11
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Sheng J, Pooler DRS, Feringa BL. Enlightening dynamic functions in molecular systems by intrinsically chiral light-driven molecular motors. Chem Soc Rev 2023; 52:5875-5891. [PMID: 37581608 PMCID: PMC10464662 DOI: 10.1039/d3cs00247k] [Citation(s) in RCA: 11] [Impact Index Per Article: 11.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/25/2023] [Indexed: 08/16/2023]
Abstract
Chirality is a fundamental property which plays a major role in chemistry, physics, biological systems and materials science. Chiroptical artificial molecular motors (AMMs) are a class of molecules which can convert light energy input into mechanical work, and they hold great potential in the transformation from simple molecules to dynamic systems and responsive materials. Taking distinct advantages of the intrinsic chirality in these structures and the unique opportunity to modulate the chirality on demand, chiral AMMs have been designed for the development of light-responsive dynamic processes including switchable asymmetric catalysis, chiral self-assembly, stereoselective recognition, transmission of chirality, control of spin selectivity and biosystems as well as integration of unidirectional motion with specific mechanical functions. This review focuses on the recently developed strategies for chirality-led applications by the class of intrinsically chiral AMMs. Finally, some limitations in current design and challenges associated with recent systems are discussed and perspectives towards promising candidates for responsive and smart molecular systems and future applications are presented.
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Affiliation(s)
- Jinyu Sheng
- Stratingh Institute for Chemistry, Zernike Institute for Advanced Materials, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
| | - Daisy R S Pooler
- Stratingh Institute for Chemistry, Zernike Institute for Advanced Materials, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
| | - Ben L Feringa
- Stratingh Institute for Chemistry, Zernike Institute for Advanced Materials, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
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12
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Guinart A, Korpidou M, Doellerer D, Pacella G, Stuart MCA, Dinu IA, Portale G, Palivan C, Feringa BL. Synthetic molecular motor activates drug delivery from polymersomes. Proc Natl Acad Sci U S A 2023; 120:e2301279120. [PMID: 37364098 PMCID: PMC10319042 DOI: 10.1073/pnas.2301279120] [Citation(s) in RCA: 6] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2023] [Accepted: 04/27/2023] [Indexed: 06/28/2023] Open
Abstract
The design of stimuli-responsive systems in nanomedicine arises from the challenges associated with the unsolved needs of current molecular drug delivery. Here, we present a delivery system with high spatiotemporal control and tunable release profiles. The design is based on the combination of an hydrophobic synthetic molecular rotary motor and a PDMS-b-PMOXA diblock copolymer to create a responsive self-assembled system. The successful incorporation and selective activation by low-power visible light (λ = 430 nm, 6.9 mW) allowed to trigger the delivery of a fluorescent dye with high efficiencies (up to 75%). Moreover, we proved the ability to turn on and off the responsive behavior on demand over sequential cycles. Low concentrations of photoresponsive units (down to 1 mol% of molecular motor) are shown to effectively promote release. Our system was also tested under relevant physiological conditions using a lung cancer cell line and the encapsulation of an Food and Drug Administration (FDA)-approved drug. Similar levels of cell viability are observed compared to the free given drug showing the potential of our platform to deliver functional drugs on request with high efficiency. This work provides an important step for the application of synthetic molecular machines in the next generation of smart delivery systems.
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Affiliation(s)
- Ainoa Guinart
- Faculty of Science and Engineering, Stratingh Institute for Chemistry, University of Groningen, 9747 AGGroningen, The Netherlands
| | - Maria Korpidou
- Department of Chemistry, University of Basel, BPR 1096, 4058Basel, Switzerland
| | - Daniel Doellerer
- Faculty of Science and Engineering, Stratingh Institute for Chemistry, University of Groningen, 9747 AGGroningen, The Netherlands
| | - Gianni Pacella
- Faculty of Science and Engineering, Zernike Institute for Advanced Materials, University of Groningen, 9747 AGGroningen, The Netherlands
| | - Marc C. A. Stuart
- Faculty of Science and Engineering, Stratingh Institute for Chemistry, University of Groningen, 9747 AGGroningen, The Netherlands
| | - Ionel Adrian Dinu
- Department of Chemistry, University of Basel, BPR 1096, 4058Basel, Switzerland
- National Centre of Competence in Research-Molecular Systems Engineering, BioPark Rosental 1095Basel, Switzerland
| | - Giuseppe Portale
- Faculty of Science and Engineering, Zernike Institute for Advanced Materials, University of Groningen, 9747 AGGroningen, The Netherlands
| | - Cornelia Palivan
- Department of Chemistry, University of Basel, BPR 1096, 4058Basel, Switzerland
- National Centre of Competence in Research-Molecular Systems Engineering, BioPark Rosental 1095Basel, Switzerland
- Swiss Nanoscience Institute, University of Basel, 4056Basel, Switzerland
| | - Ben L. Feringa
- Faculty of Science and Engineering, Stratingh Institute for Chemistry, University of Groningen, 9747 AGGroningen, The Netherlands
- Faculty of Science and Engineering, Zernike Institute for Advanced Materials, University of Groningen, 9747 AGGroningen, The Netherlands
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13
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Das G, Prakasam T, Alkhatib N, AbdulHalim RG, Chandra F, Sharma SK, Garai B, Varghese S, Addicoat MA, Ravaux F, Pasricha R, Jagannathan R, Saleh N, Kirmizialtin S, Olson MA, Trabolsi A. Light-driven self-assembly of spiropyran-functionalized covalent organic framework. Nat Commun 2023; 14:3765. [PMID: 37353549 PMCID: PMC10290075 DOI: 10.1038/s41467-023-39402-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2022] [Accepted: 06/13/2023] [Indexed: 06/25/2023] Open
Abstract
Controlling the number of molecular switches and their relative positioning within porous materials is critical to their functionality and properties. The proximity of many molecular switches to one another can hinder or completely suppress their response. Herein, a synthetic strategy involving mixed linkers is used to control the distribution of spiropyran-functionalized linkers in a covalent organic framework (COF). The COF contains a spiropyran in each pore which exhibits excellent reversible photoswitching behavior to its merocyanine form in the solid state in response to UV/Vis light. The spiro-COF possesses an urchin-shaped morphology and exhibits a morphological transition to 2D nanosheets and vesicles in solution upon UV light irradiation. The merocyanine-equipped COFs are extremely stable and possess a more ordered structure with enhanced photoluminescence. This approach to modulating structural isomerization in the solid state is used to develop inkless printing media, while the photomediated polarity change is used for water harvesting applications.
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Affiliation(s)
- Gobinda Das
- Chemistry Program, New York University Abu Dhabi (NYUAD), Saadiyat Island, Abu Dhabi, United Arab Emirates
| | - Thirumurugan Prakasam
- Chemistry Program, New York University Abu Dhabi (NYUAD), Saadiyat Island, Abu Dhabi, United Arab Emirates
| | - Nour Alkhatib
- Chemistry Program, New York University Abu Dhabi (NYUAD), Saadiyat Island, Abu Dhabi, United Arab Emirates
| | - Rasha G AbdulHalim
- Chemistry Program, New York University Abu Dhabi (NYUAD), Saadiyat Island, Abu Dhabi, United Arab Emirates
| | - Falguni Chandra
- Chemistry Department, College of Science, United Arab Emirates University, P.O. Box 15551, Al-Ain, United Arab Emirates
| | - Sudhir Kumar Sharma
- Engineering Division, New York University Abu Dhabi (NYUAD), Abu Dhabi, United Arab Emirates
| | - Bikash Garai
- Chemistry Program, New York University Abu Dhabi (NYUAD), Saadiyat Island, Abu Dhabi, United Arab Emirates
- NYUAD Water Research Center, New York University Abu Dhabi (NYUAD), Saadiyat Island, Abu Dhabi, United Arab Emirates
| | - Sabu Varghese
- CTP, New York University Abu Dhabi, 129188, Abu Dhabi, United Arab Emirates
| | - Matthew A Addicoat
- School of Science and Technology, Nottingham Trent University, Clifton Lane, NG11 8NS, Nottingham, UK
| | - Florent Ravaux
- Quantum research center, Technology Innovation Institute, P.O. Box 9639, Abu Dhabi, United Arab Emirates
| | - Renu Pasricha
- CTP, New York University Abu Dhabi, 129188, Abu Dhabi, United Arab Emirates
| | - Ramesh Jagannathan
- Engineering Division, New York University Abu Dhabi (NYUAD), Abu Dhabi, United Arab Emirates
| | - Na'il Saleh
- Chemistry Department, College of Science, United Arab Emirates University, P.O. Box 15551, Al-Ain, United Arab Emirates
- Zayed Center for Health Sciences, United Arab Emirates University, P.O. Box 15551, Al Ain, United Arab Emirates
| | - Serdal Kirmizialtin
- Chemistry Program, New York University Abu Dhabi (NYUAD), Saadiyat Island, Abu Dhabi, United Arab Emirates
- Center for Smart Engineering Materials, New York University Abu Dhabi (NYUAD), Abu Dhabi, United Arab Emirates
| | - Mark A Olson
- Department of Physical and Environmental Sciences, Texas A&M University Corpus Christi, 6300 Ocean Dr., Corpus Christi, TX, 78412, USA.
| | - Ali Trabolsi
- Chemistry Program, New York University Abu Dhabi (NYUAD), Saadiyat Island, Abu Dhabi, United Arab Emirates.
- NYUAD Water Research Center, New York University Abu Dhabi (NYUAD), Saadiyat Island, Abu Dhabi, United Arab Emirates.
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14
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Lane BJ, Pliotas C. Approaches for the modulation of mechanosensitive MscL channel pores. Front Chem 2023; 11:1162412. [PMID: 37021145 PMCID: PMC10069478 DOI: 10.3389/fchem.2023.1162412] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/09/2023] [Accepted: 03/03/2023] [Indexed: 03/17/2023] Open
Abstract
MscL was the first mechanosensitive ion channel identified in bacteria. The channel opens its large pore when the turgor pressure of the cytoplasm increases close to the lytic limit of the cellular membrane. Despite their ubiquity across organisms, their importance in biological processes, and the likelihood that they are one of the oldest mechanisms of sensory activation in cells, the exact molecular mechanism by which these channels sense changes in lateral tension is not fully understood. Modulation of the channel has been key to understanding important aspects of the structure and function of MscL, but a lack of molecular triggers of these channels hindered early developments in the field. Initial attempts to activate mechanosensitive channels and stabilize functionally relevant expanded or open states relied on mutations and associated post-translational modifications that were often cysteine reactive. These sulfhydryl reagents positioned at key residues have allowed the engineering of MscL channels for biotechnological purposes. Other studies have modulated MscL by altering membrane properties, such as lipid composition and physical properties. More recently, a variety of structurally distinct agonists have been shown bind to MscL directly, close to a transmembrane pocket that has been shown to have an important role in channel mechanical gating. These agonists have the potential to be developed further into antimicrobial therapies that target MscL, by considering the structural landscape and properties of these pockets.
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Affiliation(s)
- Benjamin J. Lane
- Astbury Centre for Structural Molecular Biology, School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, United Kingdom
| | - Christos Pliotas
- Astbury Centre for Structural Molecular Biology, School of Biomedical Sciences, Faculty of Biological Sciences, University of Leeds, Leeds, United Kingdom
- School of Biological Sciences, Faculty of Biology, Medicine and Health, Manchester Academic and Health Science Centre, The University of Manchester, Manchester, United Kingdom
- Manchester Institute of Biotechnology, The University of Manchester, Manchester, United Kingdom
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15
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Soromenho MRC, Afonso CAM, Esperança JMSS. Diarylethene-Based Ionic Liquids: Synthesis and Photo-Driven Solution Properties. Int J Mol Sci 2023; 24:3533. [PMID: 36834945 PMCID: PMC9960670 DOI: 10.3390/ijms24043533] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2022] [Revised: 02/03/2023] [Accepted: 02/06/2023] [Indexed: 02/12/2023] Open
Abstract
In this work, the design and synthesis of a series of photochromic gemini diarylethene-based ionic liquids (GDILs) with different cationic motifs is reported. Several synthetic pathways were optimized for the formation of cationic GDILs with chloride as the counterion. The different cationic motifs were achieved through the N-alkylation of the photochromic organic core unit with different tertiary amines, including different aromatic amines such as imidazole derivatives and pyridinium, and other non-aromatic amines. These novel salts present surprising water solubility with unexplored photochromic features that broaden their known applications. The covalent attachment of the different side groups dictates their water solubility and differences upon photocyclization. The physicochemical properties of GDILs in aqueous and in imidazolium-based ionic liquid (IL) solutions were investigated. Upon irradiation with ultraviolet (UV) light, we have observed changes in the physico-chemical properties of distinct solutions containing these GDILs, at very low concentrations. More specifically, in aqueous solution, the overall conductivity increased with the time of UV photoirradiation. In contrast, in IL solution, these photoinducible changes are dependent on the type of ionic liquid used. These compounds can improve non-ionic and ionic liquids' solutions since we can change their properties, such as conductivity, viscosity or ionicity, only by UV photoirradiation. The electronic and conformational changes associated with these innovative stimuli GDILs may open new opportunities for their use as photoswitchable materials.
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Affiliation(s)
- Mário R. C. Soromenho
- LAQV-REQUIMTE, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa, 2829-516 Caparica, Portugal
| | - Carlos A. M. Afonso
- Research Institute for Medicine (iMed.ULisboa), Faculty of Pharmacy, Universidade de Lisboa, 1649-003 Lisboa, Portugal
| | - José M. S. S. Esperança
- LAQV-REQUIMTE, Departamento de Química, Faculdade de Ciências e Tecnologia, Universidade NOVA de Lisboa, 2829-516 Caparica, Portugal
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16
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Offenbartl‐Stiegert D, Rottensteiner A, Dorey A, Howorka S. A Light-Triggered Synthetic Nanopore for Controlling Molecular Transport Across Biological Membranes. Angew Chem Int Ed Engl 2022; 61:e202210886. [PMID: 36318092 PMCID: PMC10098474 DOI: 10.1002/anie.202210886] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/25/2022] [Indexed: 11/06/2022]
Abstract
Controlling biological molecular processes with light is of interest in biological research and biomedicine, as light allows precise and selective activation in a non-invasive and non-toxic manner. A molecular process benefitting from light control is the transport of cargo across biological membranes, which is conventionally achieved by membrane-puncturing barrel-shaped nanopores. Yet, there is also considerable gain in constructing more complex gated pores. Here, we pioneer a synthetic light-gated nanostructure which regulates transport across membranes via a controllable lid. The light-triggered nanopore is self-assembled from six pore-forming DNA strands and a lid strand carrying light-switchable azobenzene molecules. Exposure to light opens the pore to allow small-molecule transport across membranes. Our light-triggered pore advances biomimetic chemistry and DNA nanotechnology and may be used in biotechnology, biosensing, targeted drug release, or synthetic cells.
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Affiliation(s)
- Daniel Offenbartl‐Stiegert
- Department of ChemistryInstitute for Structural and Molecular BiologyUniversity College LondonWC1H0AJLondonUK
| | - Alexia Rottensteiner
- Department of ChemistryInstitute for Structural and Molecular BiologyUniversity College LondonWC1H0AJLondonUK
| | - Adam Dorey
- Department of ChemistryInstitute for Structural and Molecular BiologyUniversity College LondonWC1H0AJLondonUK
| | - Stefan Howorka
- Department of ChemistryInstitute for Structural and Molecular BiologyUniversity College LondonWC1H0AJLondonUK
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17
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Yamaguchi T, Ogawa M. Photoinduced movement: how photoirradiation induced the movements of matter. SCIENCE AND TECHNOLOGY OF ADVANCED MATERIALS 2022; 23:796-844. [PMID: 36465797 PMCID: PMC9718566 DOI: 10.1080/14686996.2022.2142955] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/06/2022] [Revised: 10/26/2022] [Accepted: 10/27/2022] [Indexed: 06/17/2023]
Abstract
Pioneered by the success on active transport of ions across membranes in 1980 using the regulation of the binding properties of crown ethers with covalently linked photoisomerizable units, extensive studies on the movements by using varied interactions between moving objects and environments have been reported. Photoinduced movements of various objects ranging from molecules, polymers to microscopic particles were discussed from the aspects of the driving for the movements, materials design to achieve the movements and systems design to see and to utilize the movements are summarized in this review.
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Affiliation(s)
- Tetsuo Yamaguchi
- Department of Energy and Materials Engineering, Dongguk University-Seoul, Seoul, South Korea
| | - Makoto Ogawa
- School of Energy Science and Engineering, Vidyasirimedhi Institute of Science and Technology (VISTEC), Rayong, Thailand
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18
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Mao X, Liu M, Li Q, Fan C, Zuo X. DNA-Based Molecular Machines. JACS AU 2022; 2:2381-2399. [PMID: 36465542 PMCID: PMC9709946 DOI: 10.1021/jacsau.2c00292] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2022] [Revised: 07/02/2022] [Accepted: 07/08/2022] [Indexed: 05/17/2023]
Abstract
Artificial molecular machines have found widespread applications ranging from fundamental studies to biomedicine. More recent advances in exploiting unique physical and chemical properties of DNA have led to the development of DNA-based artificial molecular machines. The unprecedented programmability of DNA provides a powerful means to design complex and sophisticated DNA-based molecular machines that can exert mechanical force or motion to realize complex tasks in a controllable, modular fashion. This Perspective highlights the potential and strategies to construct artificial molecular machines using double-stranded DNA, functional nucleic acids, and DNA frameworks, which enable improved control over reaction pathways and motion behaviors. We also outline the challenges and opportunities of using DNA-based molecular machines for biophysics, biosensing, and biocomputing.
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Affiliation(s)
- Xiuhai Mao
- Institute of Molecular Medicine, Shanghai Key Laboratory for Nucleic Acid Chemistry and Nanomedicine, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200127, China
| | - Mengmeng Liu
- Shanghai Key Laboratory of Green Chemistry and Chemical Processes, School of Chemistry and Molecular Engineering, East China Normal University, 500 Dongchuan Road, Shanghai 200127, China
| | - Qian Li
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules and National Center for Translational Medicine, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Chunhai Fan
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules and National Center for Translational Medicine, Shanghai Jiao Tong University, Shanghai 200240, China
| | - Xiaolei Zuo
- Institute of Molecular Medicine, Shanghai Key Laboratory for Nucleic Acid Chemistry and Nanomedicine, Renji Hospital, School of Medicine, Shanghai Jiao Tong University, Shanghai 200127, China
- School of Chemistry and Chemical Engineering, Frontiers Science Center for Transformative Molecules and National Center for Translational Medicine, Shanghai Jiao Tong University, Shanghai 200240, China
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19
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Li Y, Maffeo C, Joshi H, Aksimentiev A, Ménard B, Schulman R. Leakless end-to-end transport of small molecules through micron-length DNA nanochannels. SCIENCE ADVANCES 2022; 8:eabq4834. [PMID: 36070388 PMCID: PMC9451144 DOI: 10.1126/sciadv.abq4834] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Accepted: 07/21/2022] [Indexed: 06/15/2023]
Abstract
Designed and engineered protein and DNA nanopores can be used to sense and characterize single molecules and control transmembrane transport of molecular species. However, designed biomolecular pores are less than 100 nm in length and are used primarily for transport across lipid membranes. Nanochannels that span longer distances could be used as conduits for molecules between nonadjacent compartments or cells. Here, we design micrometer-long, 7-nm-diameter DNA nanochannels that small molecules can traverse according to the laws of continuum diffusion. Binding DNA origami caps to channel ends eliminates transport and demonstrates that molecules diffuse from one channel end to the other rather than permeating through channel walls. These micrometer-length nanochannels can also grow, form interconnects, and interface with living cells. This work thus shows how to construct multifunctional, dynamic agents that control molecular transport, opening ways of studying intercellular signaling and modulating molecular transport between synthetic and living cells.
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Affiliation(s)
- Yi Li
- Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, MD 21218, USA
| | - Christopher Maffeo
- Department of Physics, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA
| | - Himanshu Joshi
- Department of Physics, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA
| | - Aleksei Aksimentiev
- Department of Physics, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA
- Beckman Institute for Advanced Science and Technology, University of Illinois Urbana-Champaign, Urbana, IL 61801, USA
| | - Brice Ménard
- Department of Physics and Astronomy, Johns Hopkins University, Baltimore, MD 21218, USA
| | - Rebecca Schulman
- Department of Chemical and Biomolecular Engineering, Johns Hopkins University, Baltimore, MD 21218, USA
- Department of Computer Science, Johns Hopkins University, Baltimore, MD 21218, USA
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20
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Volarić J, Thallmair S, Feringa BL, Szymanski W. Photoswitchable, Water‐soluble Bis‐azobenzene Cross‐linkers with Enhanced Properties for Biological Applications. CHEMPHOTOCHEM 2022. [DOI: 10.1002/cptc.202200170] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/05/2022]
Affiliation(s)
- Jana Volarić
- University of Groningen: Rijksuniversiteit Groningen Stratingh Institute for Chemistry NETHERLANDS
| | - Sebastian Thallmair
- Frankfurt Institute for Advanced Studies Frankfurt Institute for Advanced Studies GERMANY
| | - Ben L. Feringa
- University of Groningen: Rijksuniversiteit Groningen Stratingh Institute for Chemistry NETHERLANDS
| | - Wiktor Szymanski
- University Medical Center Groningen Department of Radiology Hanzeplein 1 9747AG Groningen NETHERLANDS
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21
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Kathan M, Crespi S, Troncossi A, Stindt CN, Toyoda R, Feringa BL. The Influence of Strain on the Rotation of an Artificial Molecular Motor. Angew Chem Int Ed Engl 2022; 61:e202205801. [PMID: 35718745 PMCID: PMC9544085 DOI: 10.1002/anie.202205801] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2022] [Indexed: 11/13/2022]
Abstract
In artificial small‐molecule machines, molecular motors can be used to perform work on coupled systems by applying a mechanical load—such as strain—that allows for energy transduction. Here, we report how ring strain influences the rotation of a rotary molecular motor. Bridging the two halves of the motor with alkyl tethers of varying sizes yields macrocycles that constrain the motor's movement. Increasing the ring size by two methylene increments increases the mobility of the motor stepwise and allows for fine‐tuning of strain in the system. Small macrocycles (8–14 methylene units) only undergo a photochemical E/Z isomerization. Larger macrocycles (16–22 methylene units) can perform a full rotational cycle, but thermal helix inversion is strongly dependent on the ring size. This study provides systematic and quantitative insight into the behavior of molecular motors under a mechanical load, paving the way for the development of complex coupled nanomachinery.
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Affiliation(s)
- Michael Kathan
- Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen (The Netherlands
- Present address: Department of Chemistry Humboldt-Universität zu Berlin Brook-Taylor-Str. 2 12489 Berlin Germany
| | - Stefano Crespi
- Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen (The Netherlands
- Present address: Department of Chemistry—Ångström Laboratory Uppsala University Box 523 751 20 Uppsala Sweden
| | - Axel Troncossi
- Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen (The Netherlands
| | - Charlotte N. Stindt
- Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen (The Netherlands
| | - Ryojun Toyoda
- Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen (The Netherlands
- Present address: Department of Chemistry Graduate School of Science Tohoku University 6-3 Aramaki-Aza-Aoba, Aobaku Sendai 980-8578 Japan
| | - Ben L. Feringa
- Stratingh Institute for Chemistry University of Groningen Nijenborgh 4 9747 AG Groningen (The Netherlands
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22
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Yuan Z, Gottsacker C, He X, Waterkotte T, Park YC. Repetitive drug delivery using Light-Activated liposomes for potential antimicrobial therapies. Adv Drug Deliv Rev 2022; 187:114395. [DOI: 10.1016/j.addr.2022.114395] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2022] [Revised: 05/15/2022] [Accepted: 06/08/2022] [Indexed: 12/22/2022]
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23
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Raffo A, Gagliardi L, Fugacci U, Sagresti L, Grandinetti S, Brancato G, Biasotti S, Rocchia W. Chanalyzer: A Computational Geometry Approach for the Analysis of Protein Channel Shape and Dynamics. Front Mol Biosci 2022; 9:933924. [PMID: 35959458 PMCID: PMC9358003 DOI: 10.3389/fmolb.2022.933924] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2022] [Accepted: 06/13/2022] [Indexed: 11/18/2022] Open
Abstract
Morphological analysis of protein channels is a key step for a thorough understanding of their biological function and mechanism. In this respect, molecular dynamics (MD) is a very powerful tool, enabling the description of relevant biological events at the atomic level, which might elude experimental observations, and pointing to the molecular determinants thereof. In this work, we present a computational geometry-based approach for the characterization of the shape and dynamics of biological ion channels or pores to be used in combination with MD trajectories. This technique relies on the earliest works of Edelsbrunner and on the NanoShaper software, which makes use of the alpha shape theory to build the solvent-excluded surface of a molecular system in an aqueous solution. In this framework, a channel can be simply defined as a cavity with two entrances on the opposite sides of a molecule. Morphological characterization, which includes identification of the main axis, the corresponding local radius, and the detailed description of the global shape of the cavity, is integrated with a physico-chemical description of the surface facing the pore lumen. Remarkably, the possible existence or temporary appearance of fenestrations from the channel interior towards the outer lipid matrix is also accounted for. As a test case, we applied the present approach to the analysis of an engineered protein channel, the mechanosensitive channel of large conductance.
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Affiliation(s)
- Andrea Raffo
- Istituto di Matematica Applicata e Tecnologie Informatiche “E. Magenes”, Consiglio Nazionale delle Ricerche, Genova, Italy
| | - Luca Gagliardi
- CONCEPT Lab, Istituto Italiano di Tecnologia, Genova, Italy
| | - Ulderico Fugacci
- Istituto di Matematica Applicata e Tecnologie Informatiche “E. Magenes”, Consiglio Nazionale delle Ricerche, Genova, Italy
- *Correspondence: Ulderico Fugacci, ; Silvia Biasotti, ; Walter Rocchia,
| | - Luca Sagresti
- Scuola Normale Superiore, Pisa, Italy
- Istituto Nazionale di Fisica Nucleare (INFN), Pisa, Italy
- Consorzio Interuniversitario per lo sviluppo dei Sistemi a Grande Interfase (CSGI), Sesto Fiorentino, Italy
| | - Simone Grandinetti
- Scuola Normale Superiore, Pisa, Italy
- Dipartimento di Ingegneria Civile ed Industriale, Università di Pisa, Pisa, Italy
| | - Giuseppe Brancato
- Scuola Normale Superiore, Pisa, Italy
- Istituto Nazionale di Fisica Nucleare (INFN), Pisa, Italy
- Consorzio Interuniversitario per lo sviluppo dei Sistemi a Grande Interfase (CSGI), Sesto Fiorentino, Italy
| | - Silvia Biasotti
- Istituto di Matematica Applicata e Tecnologie Informatiche “E. Magenes”, Consiglio Nazionale delle Ricerche, Genova, Italy
- *Correspondence: Ulderico Fugacci, ; Silvia Biasotti, ; Walter Rocchia,
| | - Walter Rocchia
- Istituto di Matematica Applicata e Tecnologie Informatiche “E. Magenes”, Consiglio Nazionale delle Ricerche, Genova, Italy
- CONCEPT Lab, Istituto Italiano di Tecnologia, Genova, Italy
- *Correspondence: Ulderico Fugacci, ; Silvia Biasotti, ; Walter Rocchia,
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24
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Kathan M, Crespi S, Troncossi A, Stindt CN, Toyoda R, Feringa BL. The Influence of Strain on the Rotation of an Artificial Molecular Motor. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202205801] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022]
Affiliation(s)
- Michael Kathan
- Humboldt-Universitat zu Berlin Department of Chemistry Brook-Taylor-Str. 2 12489 Berlin GERMANY
| | - Stefano Crespi
- Uppsala Universitet Department of Chemistry Ångström LaboratoryBox 523 751 20 Uppsala SWEDEN
| | - Axel Troncossi
- University of Groningen: Rijksuniversiteit Groningen Stratingh Institute for Chemistry NETHERLANDS
| | - Charlotte N. Stindt
- University of Groningen: Rijksuniversiteit Groningen Stratingh Institute for Chemistry NETHERLANDS
| | - Ryojun Toyoda
- Tohoku University: Tohoku Daigaku Department of Chemistry JAPAN
| | - Ben L Feringa
- University of Groningen Stratingh Institute for Chemistry, Faculty of Science and Engineering Nijenborgh 4 9747 AG Groningen NETHERLANDS
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25
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Bavi O, Zhou Z, Bavi N, Mehdi Vaez Allaei S, Cox CD, Martinac B. Asymmetric effects of amphipathic molecules on mechanosensitive channels. Sci Rep 2022; 12:9976. [PMID: 35705645 PMCID: PMC9200802 DOI: 10.1038/s41598-022-14446-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2022] [Accepted: 06/06/2022] [Indexed: 12/30/2022] Open
Abstract
Mechanosensitive (MS) ion channels are primary transducers of mechanical force into electrical and/or chemical intracellular signals. Many diverse MS channel families have been shown to respond to membrane forces. As a result of this intimate relationship with the membrane and proximal lipids, amphipathic compounds exert significant effects on the gating of MS channels. Here, we performed all-atom molecular dynamics (MD) simulations and employed patch-clamp recording to investigate the effect of two amphipaths, Fluorouracil (5-FU) a chemotherapy agent, and the anaesthetic trifluoroethanol (TFE) on structurally distinct mechanosensitive channels. We show that these amphipaths have a profound effect on the bilayer order parameter as well as transbilayer pressure profile. We used bacterial mechanosensitive channels (MscL/MscS) and a eukaryotic mechanosensitive channel (TREK-1) as force-from-lipids reporters and showed that these amphipaths have differential effects on these channels depending on the amphipaths' size and shape as well as which leaflet of the bilayer they incorporate into. 5-FU is more asymmetric in shape and size than TFE and does not penetrate as deep within the bilayer as TFE. Thereby, 5-FU has a more profound effect on the bilayer and channel activity than TFE at much lower concentrations. We postulate that asymmetric effects of amphipathic molecules on mechanosensitive membrane proteins through the bilayer represents a general regulatory mechanism for these proteins.
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Affiliation(s)
- Omid Bavi
- grid.444860.a0000 0004 0600 0546Department of Mechanical and Aerospace Engineering, Shiraz University of Technology, Shiraz, Iran
| | - Zijing Zhou
- grid.1057.30000 0000 9472 3971Molecular Cardiology and Biophysics Division, Victor Chang Cardiac Research Institute, Darlinghurst, NSW 2010 Australia
| | - Navid Bavi
- grid.170205.10000 0004 1936 7822Department of Biochemistry and Molecular Biology, The University of Chicago, Chicago, IL USA
| | - S. Mehdi Vaez Allaei
- grid.46072.370000 0004 0612 7950Department of Physics, University of Tehran, 1439955961 Tehran, Iran
| | - Charles D. Cox
- grid.1057.30000 0000 9472 3971Molecular Cardiology and Biophysics Division, Victor Chang Cardiac Research Institute, Darlinghurst, NSW 2010 Australia ,grid.1005.40000 0004 4902 0432Faculty of Medicine, St Vincent’s Clinical School, University of New South Wales, Darlinghurst, NSW 2010 Australia
| | - B. Martinac
- grid.1057.30000 0000 9472 3971Molecular Cardiology and Biophysics Division, Victor Chang Cardiac Research Institute, Darlinghurst, NSW 2010 Australia ,grid.1005.40000 0004 4902 0432Faculty of Medicine, St Vincent’s Clinical School, University of New South Wales, Darlinghurst, NSW 2010 Australia
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26
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Yang L, Zhang F, Chen C, Liu Z, Liu L, Li H. An Ultraviolet/Visible Light Regulated Protein Transport Gate Constructed by Pillar[6]arene-based Host-Guest System. Chem Asian J 2022; 17:e202200455. [PMID: 35532204 DOI: 10.1002/asia.202200455] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/29/2022] [Revised: 05/06/2022] [Indexed: 11/08/2022]
Abstract
Protein transport is an interesting and intrinsic life feature that is highly relevant to physiology and disease in living beings. Herein, inspired by nature, based on the supramolecular host-guest interaction, we have introduced the classical azobenzene light switches and L-phenylalanine derived pillar[6]arene (L-Phe-P6) into the artificial nanochannel to construct light-responsive nanochannels that could regulate protein transport effectively under the control of ultraviolet (UV) and visible (Vis) light. The light-controlled distribution of L-Phe-P6 in the channel led to the difference in surface charges in the nanochannel, which eventually brought the difference in protein transport. This research may not only provide a convenient theoretical model for biological research, but also a flexible light-responsive protein transport model, which will play a crucial role in light-controlled release of protein drugs and so on.
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Affiliation(s)
- Lei Yang
- Central China Normal University, College of Chmistry, CHINA
| | - Fan Zhang
- Hubei University, College of Chemistry and Chemical Engineering, CHINA
| | - Chunxiu Chen
- Central China Normal University, College of Chemistry, CHINA
| | - Zhisheng Liu
- Central China Normal University, College of Chemistry, CHINA
| | - Lu Liu
- Central China Normal University, College of Chemistry, CHINA
| | - Haibing Li
- Central China Normal University, Key Laboratory of Pesticide & Chemical Biology CCNU , Ministry of Education;, 152#, luoyu road, 430079, Wuhan, CHINA
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27
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Li CY, Rehm FBH, Yap K, Zdenek CN, Harding MD, Fry BG, Durek T, Craik DJ, de Veer SJ. Cystine Knot Peptides with Tuneable Activity and Mechanism. Angew Chem Int Ed Engl 2022; 61:e202200951. [PMID: 35224831 PMCID: PMC9539897 DOI: 10.1002/anie.202200951] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2022] [Indexed: 11/17/2022]
Abstract
Knottins are topologically complex peptides that are stabilised by a cystine knot and have exceptionally diverse functions, including protease inhibition. However, approaches for tuning their activity in situ are limited. Here, we demonstrate separate approaches for tuning the activity of knottin protease inhibitors using light or streptavidin. We show that the inhibitory activity and selectivity of an engineered knottin can be controlled with light by activating a second mode of action that switches the inhibitor ON against new targets. Guided by a knottin library screen, we also identify a position in the inhibitor's binding loop that permits insertion of a biotin tag without impairing activity. Using streptavidin, biotinylated knottins with nanomolar affinity can be switched OFF in activity assays, and the anticoagulant activity of a factor XIIa inhibitor can be rapidly switched OFF in human plasma. Our findings expand the scope of engineered knottins for precisely controlling protein function.
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Affiliation(s)
- Choi Yi Li
- Institute for Molecular Bioscience, Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Fabian B H Rehm
- Institute for Molecular Bioscience, Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Kuok Yap
- Institute for Molecular Bioscience, Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Christina N Zdenek
- Venom Evolution Lab, School of Biological Sciences, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Maxim D Harding
- Institute for Molecular Bioscience, Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Bryan G Fry
- Venom Evolution Lab, School of Biological Sciences, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Thomas Durek
- Institute for Molecular Bioscience, Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, The University of Queensland, Brisbane, QLD 4072, Australia
| | - David J Craik
- Institute for Molecular Bioscience, Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, The University of Queensland, Brisbane, QLD 4072, Australia
| | - Simon J de Veer
- Institute for Molecular Bioscience, Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science, The University of Queensland, Brisbane, QLD 4072, Australia
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28
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Das R, Lindström T, Sharma PR, Chi K, Hsiao BS. Nanocellulose for Sustainable Water Purification. Chem Rev 2022; 122:8936-9031. [PMID: 35330990 DOI: 10.1021/acs.chemrev.1c00683] [Citation(s) in RCA: 56] [Impact Index Per Article: 28.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Abstract
Nanocelluloses (NC) are nature-based sustainable biomaterials, which not only possess cellulosic properties but also have the important hallmarks of nanomaterials, such as large surface area, versatile reactive sites or functionalities, and scaffolding stability to host inorganic nanoparticles. This class of nanomaterials offers new opportunities for a broad spectrum of applications for clean water production that were once thought impractical. This Review covers substantial discussions based on evaluative judgments of the recent literature and technical advancements in the fields of coagulation/flocculation, adsorption, photocatalysis, and membrane filtration for water decontamination through proper understanding of fundamental knowledge of NC, such as purity, crystallinity, surface chemistry and charge, suspension rheology, morphology, mechanical properties, and film stability. To supplement these, discussions on low-cost and scalable NC extraction, new characterizations including solution small-angle X-ray scattering evaluation, and structure-property relationships of NC are also reviewed. Identifying knowledge gaps and drawing perspectives could generate guidance to overcome uncertainties associated with the adaptation of NC-enabled water purification technologies. Furthermore, the topics of simultaneous removal of multipollutants disposal and proper handling of post/spent NC are discussed. We believe NC-enabled remediation nanomaterials can be integrated into a broad range of water treatments, greatly improving the cost-effectiveness and sustainability of water purification.
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Affiliation(s)
- Rasel Das
- Department of Chemistry, Stony Brook University, Stony Brook, New York 11794-3400, United States
| | - Tom Lindström
- Department of Chemistry, Stony Brook University, Stony Brook, New York 11794-3400, United States.,KTH Royal Institute of Technology, Stockholm 100 44, Sweden
| | - Priyanka R Sharma
- Department of Chemistry, Stony Brook University, Stony Brook, New York 11794-3400, United States
| | - Kai Chi
- Department of Chemistry, Stony Brook University, Stony Brook, New York 11794-3400, United States
| | - Benjamin S Hsiao
- Department of Chemistry, Stony Brook University, Stony Brook, New York 11794-3400, United States
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29
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Li CY, Rehm FBH, Yap K, Zdenek CN, Harding MD, Fry BG, Durek T, Craik DJ, Veer SJ. Cystine Knot Peptides with Tuneable Activity and Mechanism. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202200951] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Affiliation(s)
- Choi Yi Li
- Institute for Molecular Bioscience Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science The University of Queensland Brisbane QLD 4072 Australia
| | - Fabian B. H. Rehm
- Institute for Molecular Bioscience Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science The University of Queensland Brisbane QLD 4072 Australia
| | - Kuok Yap
- Institute for Molecular Bioscience Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science The University of Queensland Brisbane QLD 4072 Australia
| | - Christina N. Zdenek
- Venom Evolution Lab School of Biological Sciences The University of Queensland Brisbane QLD 4072 Australia
| | - Maxim D. Harding
- Institute for Molecular Bioscience Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science The University of Queensland Brisbane QLD 4072 Australia
| | - Bryan G. Fry
- Venom Evolution Lab School of Biological Sciences The University of Queensland Brisbane QLD 4072 Australia
| | - Thomas Durek
- Institute for Molecular Bioscience Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science The University of Queensland Brisbane QLD 4072 Australia
| | - David J. Craik
- Institute for Molecular Bioscience Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science The University of Queensland Brisbane QLD 4072 Australia
| | - Simon J. Veer
- Institute for Molecular Bioscience Australian Research Council Centre of Excellence for Innovations in Peptide and Protein Science The University of Queensland Brisbane QLD 4072 Australia
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30
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Smith JM, Chowdhry R, Booth MJ. Controlling Synthetic Cell-Cell Communication. Front Mol Biosci 2022; 8:809945. [PMID: 35071327 PMCID: PMC8766733 DOI: 10.3389/fmolb.2021.809945] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/05/2021] [Accepted: 12/13/2021] [Indexed: 11/28/2022] Open
Abstract
Synthetic cells, which mimic cellular function within a minimal compartment, are finding wide application, for instance in studying cellular communication and as delivery devices to living cells. However, to fully realise the potential of synthetic cells, control of their function is vital. An array of tools has already been developed to control the communication of synthetic cells to neighbouring synthetic cells or living cells. These tools use either chemical inputs, such as small molecules, or physical inputs, such as light. Here, we examine these current methods of controlling synthetic cell communication and consider alternative mechanisms for future use.
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Affiliation(s)
| | | | - Michael J. Booth
- Chemistry Research Laboratory, University of Oxford, Oxford, United Kingdom
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31
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Bickerton LE, Langton MJ. Controlling transmembrane ion transport via photo-regulated carrier mobility. Chem Sci 2022; 13:9531-9536. [PMID: 36091898 PMCID: PMC9400602 DOI: 10.1039/d2sc03322d] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/14/2022] [Accepted: 07/07/2022] [Indexed: 11/21/2022] Open
Abstract
Photo-gated anion transport is achieved by modulating the mobility of mobile carriers within a lipid bilayer membrane, using a photo-cleavable membrane anchor. This enables in situ, off–on activation of transport in vesicles.
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Affiliation(s)
- Laura E. Bickerton
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford 12 Mansfield Road, Oxford, OX1 3TA, UK
| | - Matthew J. Langton
- Chemistry Research Laboratory, Department of Chemistry, University of Oxford 12 Mansfield Road, Oxford, OX1 3TA, UK
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32
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Guardiani C, Cecconi F, Chiodo L, Cottone G, Malgaretti P, Maragliano L, Barabash ML, Camisasca G, Ceccarelli M, Corry B, Roth R, Giacomello A, Roux B. Computational methods and theory for ion channel research. ADVANCES IN PHYSICS: X 2022; 7:2080587. [PMID: 35874965 PMCID: PMC9302924 DOI: 10.1080/23746149.2022.2080587] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/28/2022] [Accepted: 05/15/2022] [Indexed: 06/15/2023] Open
Abstract
Ion channels are fundamental biological devices that act as gates in order to ensure selective ion transport across cellular membranes; their operation constitutes the molecular mechanism through which basic biological functions, such as nerve signal transmission and muscle contraction, are carried out. Here, we review recent results in the field of computational research on ion channels, covering theoretical advances, state-of-the-art simulation approaches, and frontline modeling techniques. We also report on few selected applications of continuum and atomistic methods to characterize the mechanisms of permeation, selectivity, and gating in biological and model channels.
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Affiliation(s)
- C. Guardiani
- Dipartimento di Ingegneria Meccanica e Aerospaziale, Sapienza Università di Roma, Rome, Italy
| | - F. Cecconi
- CNR - Istituto dei Sistemi Complessi, Rome, Italy and Istituto Nazionale di Fisica Nucleare, INFN, Roma1 section. 00185, Roma, Italy
| | - L. Chiodo
- Department of Engineering, Campus Bio-Medico University, Rome, Italy
| | - G. Cottone
- Department of Physics and Chemistry-Emilio Segrè, University of Palermo, Palermo, Italy
| | - P. Malgaretti
- Helmholtz Institute Erlangen-Nürnberg for Renewable Energy (IEK-11), Forschungszentrum Jülich, Erlangen, Germany
| | - L. Maragliano
- Department of Life and Environmental Sciences, Polytechnic University of Marche, Ancona, Italy, and Center for Synaptic Neuroscience and Technology, Istituto Italiano di Tecnologia, Genova, Italy
| | - M. L. Barabash
- Department of Materials Science and Nanoengineering, Rice University, Houston, TX 77005, USA
| | - G. Camisasca
- Dipartimento di Ingegneria Meccanica e Aerospaziale, Sapienza Università di Roma, Rome, Italy
- Dipartimento di Fisica, Università Roma Tre, Rome, Italy
| | - M. Ceccarelli
- Department of Physics and CNR-IOM, University of Cagliari, Monserrato 09042-IT, Italy
| | - B. Corry
- Research School of Biology, The Australian National University, Canberra, ACT 2600, Australia
| | - R. Roth
- Institut Für Theoretische Physik, Eberhard Karls Universität Tübingen, Tübingen, Germany
| | - A. Giacomello
- Dipartimento di Ingegneria Meccanica e Aerospaziale, Sapienza Università di Roma, Rome, Italy
| | - B. Roux
- Department of Biochemistry & Molecular Biology, University of Chicago, Chicago IL, USA
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33
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Sharma B, Moghimianavval H, Hwang SW, Liu AP. Synthetic Cell as a Platform for Understanding Membrane-Membrane Interactions. MEMBRANES 2021; 11:912. [PMID: 34940413 PMCID: PMC8706075 DOI: 10.3390/membranes11120912] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/20/2021] [Revised: 11/10/2021] [Accepted: 11/16/2021] [Indexed: 01/27/2023]
Abstract
In the pursuit of understanding life, model membranes made of phospholipids were envisaged decades ago as a platform for the bottom-up study of biological processes. Micron-sized lipid vesicles have gained great acceptance as their bilayer membrane resembles the natural cell membrane. Important biological events involving membranes, such as membrane protein insertion, membrane fusion, and intercellular communication, will be highlighted in this review with recent research updates. We will first review different lipid bilayer platforms used for incorporation of integral membrane proteins and challenges associated with their functional reconstitution. We next discuss different methods for reconstitution of membrane fusion and compare their fusion efficiency. Lastly, we will highlight the importance and challenges of intercellular communication between synthetic cells and synthetic cells-to-natural cells. We will summarize the review by highlighting the challenges and opportunities associated with studying membrane-membrane interactions and possible future research directions.
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Affiliation(s)
- Bineet Sharma
- Department of Mechanical Engineering, University of Michigan, Ann Arbor, MI 48109, USA; (B.S.); (H.M.)
| | - Hossein Moghimianavval
- Department of Mechanical Engineering, University of Michigan, Ann Arbor, MI 48109, USA; (B.S.); (H.M.)
| | - Sung-Won Hwang
- Department of Chemical Engineering, University of Michigan, Ann Arbor, MI 48109, USA;
| | - Allen P. Liu
- Department of Mechanical Engineering, University of Michigan, Ann Arbor, MI 48109, USA; (B.S.); (H.M.)
- Department of Biomedical Engineering, University of Michigan, Ann Arbor, MI 48109, USA
- Cellular and Molecular Biology Program, University of Michigan, Ann Arbor, MI 48105, USA
- Department of Biophysics, University of Michigan, Ann Arbor, MI 48105, USA
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34
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Volarić J, Szymanski W, Simeth NA, Feringa BL. Molecular photoswitches in aqueous environments. Chem Soc Rev 2021; 50:12377-12449. [PMID: 34590636 PMCID: PMC8591629 DOI: 10.1039/d0cs00547a] [Citation(s) in RCA: 132] [Impact Index Per Article: 44.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2021] [Indexed: 12/17/2022]
Abstract
Molecular photoswitches enable dynamic control of processes with high spatiotemporal precision, using light as external stimulus, and hence are ideal tools for different research areas spanning from chemical biology to smart materials. Photoswitches are typically organic molecules that feature extended aromatic systems to make them responsive to (visible) light. However, this renders them inherently lipophilic, while water-solubility is of crucial importance to apply photoswitchable organic molecules in biological systems, like in the rapidly emerging field of photopharmacology. Several strategies for solubilizing organic molecules in water are known, but there are not yet clear rules for applying them to photoswitchable molecules. Importantly, rendering photoswitches water-soluble has a serious impact on both their photophysical and biological properties, which must be taken into consideration when designing new systems. Altogether, these aspects pose considerable challenges for successfully applying molecular photoswitches in aqueous systems, and in particular in biologically relevant media. In this review, we focus on fully water-soluble photoswitches, such as those used in biological environments, in both in vitro and in vivo studies. We discuss the design principles and prospects for water-soluble photoswitches to inspire and enable their future applications.
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Affiliation(s)
- Jana Volarić
- Centre for Systems Chemistry, Stratingh Institute for Chemistry, Faculty for Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
| | - Wiktor Szymanski
- Centre for Systems Chemistry, Stratingh Institute for Chemistry, Faculty for Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
- Department of Radiology, Medical Imaging Center, University of Groningen, University Medical Centre Groningen, Hanzeplein 1, 9713 GZ Groningen, The Netherlands
| | - Nadja A Simeth
- Centre for Systems Chemistry, Stratingh Institute for Chemistry, Faculty for Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
- Institute for Organic and Biomolecular Chemistry, University of Göttingen, Tammannstr. 2, 37077 Göttingen, Germany
| | - Ben L Feringa
- Centre for Systems Chemistry, Stratingh Institute for Chemistry, Faculty for Science and Engineering, University of Groningen, Nijenborgh 4, 9747 AG Groningen, The Netherlands.
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35
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Pfeffermann J, Eicher B, Boytsov D, Hannesschlaeger C, Galimzyanov TR, Glasnov TN, Pabst G, Akimov SA, Pohl P. Photoswitching of model ion channels in lipid bilayers. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2021; 224:112320. [PMID: 34600201 DOI: 10.1016/j.jphotobiol.2021.112320] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/15/2021] [Revised: 08/27/2021] [Accepted: 09/20/2021] [Indexed: 11/19/2022]
Abstract
Membrane proteins can be regulated by alterations in material properties intrinsic to the hosting lipid bilayer. Here, we investigated whether the reversible photoisomerization of bilayer-embedded diacylglycerols (OptoDArG) with two azobenzene-containing acyl chains may trigger such regulatory events. We observed an augmented open probability of the mechanosensitive model channel gramicidin A (gA) upon photoisomerizing OptoDArG's acyl chains from trans to cis: integral planar bilayer conductance brought forth by hundreds of simultaneously conducting gA dimers increased by typically >50% - in good agreement with the observed increase in single-channel lifetime. Further, (i) increments in the electrical capacitance of planar lipid bilayers and protrusion length of aspirated giant unilamellar vesicles into suction pipettes, as well as (ii) changes of small-angle X-ray scattering of multilamellar vesicles indicated that spontaneous curvature, hydrophobic thickness, and bending elasticity decreased upon switching from trans- to cis-OptoDArG. Our bilayer elasticity model for gA supports the causal relationship between changes in gA activity and bilayer material properties upon photoisomerization. Thus, we conclude that photolipids are deployable for converting bilayers of potentially diverse origins into light-gated actuators for mechanosensitive proteins.
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Affiliation(s)
- Juergen Pfeffermann
- Institute of Biophysics, Johannes Kepler University Linz, Gruberstraße 40, Linz 4020, Austria
| | - Barbara Eicher
- University of Graz, Institute of Molecular Biosciences, Biophysics Division, NAWI Graz, Graz, Austria; BioTechMed Graz, Austria
| | - Danila Boytsov
- Institute of Biophysics, Johannes Kepler University Linz, Gruberstraße 40, Linz 4020, Austria
| | | | - Timur R Galimzyanov
- A.N. Frumkin Institute of Physical Chemistry and Electrochemistry, Russian Academy of Sciences, 31/5 Leninskiy prospekt, Moscow 119071, Russia
| | - Toma N Glasnov
- University of Graz, Institute of Chemistry, NAWI Graz, Graz, Austria
| | - Georg Pabst
- University of Graz, Institute of Molecular Biosciences, Biophysics Division, NAWI Graz, Graz, Austria; BioTechMed Graz, Austria
| | - Sergey A Akimov
- A.N. Frumkin Institute of Physical Chemistry and Electrochemistry, Russian Academy of Sciences, 31/5 Leninskiy prospekt, Moscow 119071, Russia
| | - Peter Pohl
- Institute of Biophysics, Johannes Kepler University Linz, Gruberstraße 40, Linz 4020, Austria.
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36
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Cai J, Ma W, Hao C, Sun M, Guo J, Xu L, Xu C, Kuang H. Artificial light-triggered smart nanochannels relying on optoionic effects. Chem 2021. [DOI: 10.1016/j.chempr.2021.04.008] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/28/2022]
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37
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Chang CM, Chen HT, Chuang SH, Tsai HC, Hung WS, Lai JY. Mechanisms of one-dimensional and two-dimensional synergistic thermal responses on graphene oxide-modified PNIPAm framework membranes for control of molecular separation. Sep Purif Technol 2021. [DOI: 10.1016/j.seppur.2021.118568] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
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38
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Wang C, Wang S, Yang H, Xiang Y, Wang X, Bao C, Zhu L, Tian H, Qu D. A Light‐Operated Molecular Cable Car for Gated Ion Transport. Angew Chem Int Ed Engl 2021. [DOI: 10.1002/ange.202102838] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Chenxi Wang
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering Feringa Nobel Prize Scientist Joint Research Center Frontiers Science Center for Materiobiology and Dynamic Chemistry Institute of Fine Chemicals School of Chemistry and Molecular Engineering East China University of Science and Technology Shanghai 200237 China
| | - Shunkang Wang
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering Feringa Nobel Prize Scientist Joint Research Center Frontiers Science Center for Materiobiology and Dynamic Chemistry Institute of Fine Chemicals School of Chemistry and Molecular Engineering East China University of Science and Technology Shanghai 200237 China
| | - Huiting Yang
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering Feringa Nobel Prize Scientist Joint Research Center Frontiers Science Center for Materiobiology and Dynamic Chemistry Institute of Fine Chemicals School of Chemistry and Molecular Engineering East China University of Science and Technology Shanghai 200237 China
| | - Yanxin Xiang
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering Feringa Nobel Prize Scientist Joint Research Center Frontiers Science Center for Materiobiology and Dynamic Chemistry Institute of Fine Chemicals School of Chemistry and Molecular Engineering East China University of Science and Technology Shanghai 200237 China
| | - Xuebin Wang
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering Feringa Nobel Prize Scientist Joint Research Center Frontiers Science Center for Materiobiology and Dynamic Chemistry Institute of Fine Chemicals School of Chemistry and Molecular Engineering East China University of Science and Technology Shanghai 200237 China
| | - Chunyan Bao
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering Feringa Nobel Prize Scientist Joint Research Center Frontiers Science Center for Materiobiology and Dynamic Chemistry Institute of Fine Chemicals School of Chemistry and Molecular Engineering East China University of Science and Technology Shanghai 200237 China
| | - Linyong Zhu
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering Feringa Nobel Prize Scientist Joint Research Center Frontiers Science Center for Materiobiology and Dynamic Chemistry Institute of Fine Chemicals School of Chemistry and Molecular Engineering East China University of Science and Technology Shanghai 200237 China
| | - He Tian
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering Feringa Nobel Prize Scientist Joint Research Center Frontiers Science Center for Materiobiology and Dynamic Chemistry Institute of Fine Chemicals School of Chemistry and Molecular Engineering East China University of Science and Technology Shanghai 200237 China
| | - Da‐Hui Qu
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering Feringa Nobel Prize Scientist Joint Research Center Frontiers Science Center for Materiobiology and Dynamic Chemistry Institute of Fine Chemicals School of Chemistry and Molecular Engineering East China University of Science and Technology Shanghai 200237 China
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39
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Wang C, Wang S, Yang H, Xiang Y, Wang X, Bao C, Zhu L, Tian H, Qu DH. A Light-Operated Molecular Cable Car for Gated Ion Transport. Angew Chem Int Ed Engl 2021; 60:14836-14840. [PMID: 33843130 DOI: 10.1002/anie.202102838] [Citation(s) in RCA: 49] [Impact Index Per Article: 16.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/25/2021] [Revised: 03/30/2021] [Indexed: 12/22/2022]
Abstract
Inspired by the nontrivial and controlled movements of molecular machines, we report an azobenzene-based molecular shuttle PR2, which can perform light-gated ion transport across lipid membranes. The amphiphilicity and membrane-spanning molecular length enable PR2 to insert into the bilayer membrane and efficiently transport K+ (EC50 =4.1 μm) through the thermally driven stochastic shuttle motion of the crown ether ring along the axle. The significant difference in shuttling rate between trans-PR2 and cis-PR2 induced by molecular isomerization enables a light-gated ion transport, i.e., ON/OFF in situ regulation of transport activity and single-channel current. This work represents an example of using a photoswitchable molecular machine to realize gated ion transport, which demonstrates the value of molecular machines functioning in biomembranes.
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Affiliation(s)
- Chenxi Wang
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Frontiers Science Center for Materiobiology and Dynamic Chemistry, Institute of Fine Chemicals, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, China
| | - Shunkang Wang
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Frontiers Science Center for Materiobiology and Dynamic Chemistry, Institute of Fine Chemicals, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, China
| | - Huiting Yang
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Frontiers Science Center for Materiobiology and Dynamic Chemistry, Institute of Fine Chemicals, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, China
| | - Yanxin Xiang
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Frontiers Science Center for Materiobiology and Dynamic Chemistry, Institute of Fine Chemicals, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, China
| | - Xuebin Wang
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Frontiers Science Center for Materiobiology and Dynamic Chemistry, Institute of Fine Chemicals, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, China
| | - Chunyan Bao
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Frontiers Science Center for Materiobiology and Dynamic Chemistry, Institute of Fine Chemicals, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, China
| | - Linyong Zhu
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Frontiers Science Center for Materiobiology and Dynamic Chemistry, Institute of Fine Chemicals, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, China
| | - He Tian
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Frontiers Science Center for Materiobiology and Dynamic Chemistry, Institute of Fine Chemicals, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, China
| | - Da-Hui Qu
- Key Laboratory for Advanced Materials and Joint International Research Laboratory of Precision Chemistry and Molecular Engineering, Feringa Nobel Prize Scientist Joint Research Center, Frontiers Science Center for Materiobiology and Dynamic Chemistry, Institute of Fine Chemicals, School of Chemistry and Molecular Engineering, East China University of Science and Technology, Shanghai, 200237, China
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40
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Yao J, Wu W, Xiao C, Su D, Zhong Z, Mori T, Yang C. Overtemperature-protection intelligent molecular chiroptical photoswitches. Nat Commun 2021; 12:2600. [PMID: 33972556 PMCID: PMC8110520 DOI: 10.1038/s41467-021-22880-z] [Citation(s) in RCA: 38] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/08/2021] [Accepted: 04/01/2021] [Indexed: 12/20/2022] Open
Abstract
Stimuli-responsive intelligent molecular machines/devices are of current research interest due to their potential application in minimized devices. Constructing molecular machines/devices capable of accomplishing complex missions is challenging, demanding coalescence of various functions into one molecule. Here we report the construction of intelligent molecular chiroptical photoswitches based on azobenzene-fused bicyclic pillar[n]arene derivatives, which we defined as molecular universal joints (MUJs). The Z/E photoisomerization of the azobenzene moiety of MUJs induces rolling in/out conformational switching of the azobenzene-bearing side-ring and consequently leads to planar chirality switching of MUJs. Meanwhile, temperature variation was demonstrated to also cause conformational/chiroptical inversion due to the significant entropy change during the ring-flipping. As a result, photo-induced chiroptical switching could be prohibited when the temperature exceeded an upper limit, demonstrating an intelligent molecular photoswitch having over-temperature protection function, which is in stark contrast to the low-temperature-gating effect commonly encountered. Realizing overtemperature protection with a molecular device is challenging. Here, the authors demonstrate an overtemperature protection function by integrating thermo- and photoresponsive functions into a pillar[6]arene based pseudocatanene.
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Affiliation(s)
- Jiabin Yao
- Key Laboratory of Green Chemistry & Technology of Ministry of Education, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu, China
| | - Wanhua Wu
- Key Laboratory of Green Chemistry & Technology of Ministry of Education, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu, China.
| | - Chao Xiao
- Key Laboratory of Green Chemistry & Technology of Ministry of Education, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu, China
| | - Dan Su
- Key Laboratory of Green Chemistry & Technology of Ministry of Education, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu, China
| | - Zhihui Zhong
- Key Laboratory of Green Chemistry & Technology of Ministry of Education, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu, China
| | - Tadashi Mori
- Department of Applied Chemistry, Osaka University, Suita, Japan
| | - Cheng Yang
- Key Laboratory of Green Chemistry & Technology of Ministry of Education, College of Chemistry, State Key Laboratory of Biotherapy, West China Medical Center, and Healthy Food Evaluation Research Center, Sichuan University, Chengdu, China.
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41
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Hossain MS, Bandyopadhyay S. Metal Ion Mediated Instant Z → E Isomerization of Azobenzene Macrocycles in the Absence of Light. J Org Chem 2021; 86:6314-6321. [PMID: 33858140 DOI: 10.1021/acs.joc.1c00105] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
The classical photoswitch azobenzenes reversibly interconvert between the E- and the Z-isomers with light. Here, we report a pair of new macrocyclic azobenzenes characterized thoroughly by spectroscopic methods and single crystal X-ray diffraction structures, and one of the compounds displays a quantitative conversion of the E- to the Z-form. These compounds, besides their normal photoswitching behavior, display an unusual instant switching of the Z-form to the E-isomer in the presence of Cu2+ ions in the dark under 273 K. The Cu2+ complex can stay in the Z-form under constant UV radiation. However, it reverts to the E-form as soon as the exposure to the UV is ceased. The same phenomenon is also observed with Ag+ ions albeit it is a bit slower. This unusual instant switching of the azobenzene systems with metal ions prompted the detailed studies to unravel the reason behind this behavior.
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Affiliation(s)
- Munshi Sahid Hossain
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur, Nadia, West Bengal 741246, India
| | - Subhajit Bandyopadhyay
- Department of Chemical Sciences, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur, Nadia, West Bengal 741246, India
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42
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Yang L, Catalano C, Xu Y, Qiu W, Zhang D, McDermott A, Guo Y, Blount P. A native cell membrane nanoparticles system allows for high-quality functional proteoliposome reconstitution. BBA ADVANCES 2021; 1. [PMID: 34296205 PMCID: PMC8294337 DOI: 10.1016/j.bbadva.2021.100011] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/07/2022] Open
Abstract
Proteoliposomes mimic the cell membrane environment allowing for structural and functional membrane protein analyses as well as antigen presenting and drug delivery devices. To make proteoliposomes, purified functional membrane proteins are required. Detergents have traditionally been used for the first step in this process However, they can irreversibly denature or render membrane proteins unstable, and the necessary removal of detergents after reconstitution can decrease proteoliposome yields. The recently developed native cell membrane nanoparticles (NCMN) system has provided a variety of detergent-free alternatives for membrane protein preparation for structural biology research. Here we attempt to employ the MCMN system for the functional reconstitution of channels into proteoliposomes. NCMN polymers NCMNP1–1 and NCMNP7–1, members of a NCMN polymer library that have been successful in extraction and affinity purification of a number of intrinsic membrane proteins, were selected for the purification and subsequent reconstitution of three bacterial channels: KcsA and the mechanosensitive channels of large and small conductance (MscL and MscS). We found that channels in NCMN particles, which appeared to be remarkably stable when stored at 4 °C, can be reconstituted into bilayers by simply incubating with lipids. We show that the resulting proteoliposomes can be patched for electrophysiological studies or used for the generation of liposome-based nanodevices. In sum, the findings demonstrate that the NCMN system is a simple and robust membrane protein extraction and reconstitution approach for making high-quality functional proteoliposomes that could significantly impact membrane protein research and the development of nanodevices.
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Affiliation(s)
- Limin Yang
- Department of Physiology, University of Texas Southwestern Medical Center, Dallas, TX 75390-9040, United States
| | - Claudio Catalano
- Department of Medicinal Chemistry, Virginia Commonwealth University, Richmond, VA 23298-0540, United States.,Institute for Structural Biology, Drug Discovery and Development, Virginia Commonwealth University, Richmond, VA 23298-0133, United States
| | - Yunyao Xu
- Department of Chemistry, Columbia University, New York, NY 10027, United States
| | - Weihua Qiu
- Department of Medicinal Chemistry, Virginia Commonwealth University, Richmond, VA 23298-0540, United States.,Institute for Structural Biology, Drug Discovery and Development, Virginia Commonwealth University, Richmond, VA 23298-0133, United States
| | - Dongyu Zhang
- Department of Chemistry, Columbia University, New York, NY 10027, United States
| | - Ann McDermott
- Department of Chemistry, Columbia University, New York, NY 10027, United States
| | - Youzhong Guo
- Department of Medicinal Chemistry, Virginia Commonwealth University, Richmond, VA 23298-0540, United States.,Institute for Structural Biology, Drug Discovery and Development, Virginia Commonwealth University, Richmond, VA 23298-0133, United States
| | - Paul Blount
- Department of Physiology, University of Texas Southwestern Medical Center, Dallas, TX 75390-9040, United States
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43
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Zhang X, Zhang Y, Tang S, Ma S, Shen Y, Chen Y, Tong Q, Li Y, Yang J. Hydrophobic Gate of Mechanosensitive Channel of Large Conductance in Lipid Bilayers Revealed by Solid-State NMR Spectroscopy. J Phys Chem B 2021; 125:2477-2490. [DOI: 10.1021/acs.jpcb.0c07487] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/07/2023]
Affiliation(s)
- Xuning Zhang
- Key Laboratory of Molecular Biophysics of Ministry of Education, College of Life Science and Technology and the Collaborative Innovation Center for Brain Science, Huazhong University of Science and Technology, Wuhan 430074, China
- National Center for Magnetic Resonance in Wuhan, Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, P. R. China
| | - Yan Zhang
- National Center for Magnetic Resonance in Wuhan, Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, P. R. China
- University of Chinese Academy of Sciences, Beijing 100049, P. R. China
| | - Siyang Tang
- Children’s Hospital and Department of Biophysics, NHC and CAMS Key Laboratory of Medical Neurobiology, Zhejiang University School of Medicine, Hangzhou, Zhejiang 310058, China
| | - Shaojie Ma
- Key Laboratory of Molecular Biophysics of Ministry of Education, College of Life Science and Technology and the Collaborative Innovation Center for Brain Science, Huazhong University of Science and Technology, Wuhan 430074, China
- National Center for Magnetic Resonance in Wuhan, Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, P. R. China
| | - Yang Shen
- Laboratory of Chemical Physics, National Institute of Diabetes and Digestive and Kidney Diseases, National Institutes of Health, Bethesda, Maryland 20892-0520, United States
| | - Yanke Chen
- Key Laboratory of Molecular Biophysics of Ministry of Education, College of Life Science and Technology and the Collaborative Innovation Center for Brain Science, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Qiong Tong
- Key Laboratory of Molecular Biophysics of Ministry of Education, College of Life Science and Technology and the Collaborative Innovation Center for Brain Science, Huazhong University of Science and Technology, Wuhan 430074, China
| | - Yuezhou Li
- Children’s Hospital and Department of Biophysics, NHC and CAMS Key Laboratory of Medical Neurobiology, Zhejiang University School of Medicine, Hangzhou, Zhejiang 310058, China
| | - Jun Yang
- Key Laboratory of Molecular Biophysics of Ministry of Education, College of Life Science and Technology and the Collaborative Innovation Center for Brain Science, Huazhong University of Science and Technology, Wuhan 430074, China
- National Center for Magnetic Resonance in Wuhan, Key Laboratory of Magnetic Resonance in Biological Systems, State Key Laboratory of Magnetic Resonance and Atomic and Molecular Physics, Wuhan Institute of Physics and Mathematics, Innovation Academy for Precision Measurement Science and Technology, Chinese Academy of Sciences, Wuhan 430071, P. R. China
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44
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Ghani M, Heiskanen A, Kajtez J, Rezaei B, Larsen NB, Thomsen P, Kristensen A, Žukauskas A, Alm M, Emnéus J. On-Demand Reversible UV-Triggered Interpenetrating Polymer Network-Based Drug Delivery System Using the Spiropyran-Merocyanine Hydrophobicity Switch. ACS APPLIED MATERIALS & INTERFACES 2021; 13:3591-3604. [PMID: 33438397 DOI: 10.1021/acsami.0c19081] [Citation(s) in RCA: 25] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/12/2023]
Abstract
A reversible switchable on-demand UV-triggered drug delivery system (DDS) based on interpenetrating polymer networks (IPNs) with silicone as the host polymer and spiropyran (SP)-functionalized guest polymer is designed and demonstrated. The photo-responsive IPNs provide a new triggered drug delivery concept as they exploit the change in intermolecular interactions (work of adhesion) among the drug, matrix, and solvent when the incorporated hydrophobic SP moieties transform into the hydrophilic merocyanine form upon light irradiation without degradation and disruption of the DDS. The change in how the copolymer composition (hydrophilicity and content) and the lipophilicity of the drug (log P) affect the release profile was investigated. A thermodynamic model, based on Hansen solubility parameters, was developed to design and optimize the polymer composition of the IPNs to obtain the most efficient light-triggered drug release and suppression of the premature release. The developed IPNs showed excellent result for dopamine, l-dopa, and prednisone with around 90-95% light-triggered release. The model was applied to study the release behavior of drugs with different log P and to estimate if the light-induced hydrophobic-to-hydrophilic switch can overcome the work of adhesion between polymers and drugs and hence the desorption and release of the drugs. To the best of our knowledge, this is the first time that work of adhesion is used for this aim. Comparing the result obtained from the model and experiment shows that the model is useful for evaluating and estimating the release behavior of specific drugs merocyanine, IPN, DDS, and spiropyran.
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Affiliation(s)
- Mozhdeh Ghani
- Biomodics ApS, Fjeldhammervej 15, 2610 Rødovre, Denmark
- DTU Bioengineering, Building 423, 2800 Kgs. Lyngby, Denmark
| | - Arto Heiskanen
- DTU Bioengineering, Building 423, 2800 Kgs. Lyngby, Denmark
| | - Janko Kajtez
- DTU Bioengineering, Building 423, 2800 Kgs. Lyngby, Denmark
| | - Babak Rezaei
- DTU Nanolab, Building 345, 2800 Kgs. Lyngby, Denmark
| | | | - Peter Thomsen
- Biomodics ApS, Fjeldhammervej 15, 2610 Rødovre, Denmark
| | | | | | - Martin Alm
- Biomodics ApS, Fjeldhammervej 15, 2610 Rødovre, Denmark
| | - Jenny Emnéus
- DTU Bioengineering, Building 423, 2800 Kgs. Lyngby, Denmark
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45
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Lanphere C, Arnott PM, Jones SF, Korlova K, Howorka S. A Biomimetic DNA-Based Membrane Gate for Protein-Controlled Transport of Cytotoxic Drugs. ANGEWANDTE CHEMIE (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2021; 133:1931-1936. [PMID: 38504763 PMCID: PMC10947198 DOI: 10.1002/ange.202011583] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/26/2020] [Indexed: 12/15/2022]
Abstract
Chemistry is ideally placed to replicate biomolecular structures with tuneable building materials. Of particular interest are molecular nanopores, which transport cargo across membranes, as in DNA sequencing. Advanced nanopores control transport in response to triggers, but this cannot be easily replicated with biogenic proteins. Here we use DNA nanotechnology to build a synthetic molecular gate that opens in response to a specific protein. The gate self-assembles from six DNA strands to form a bilayer-spanning pore, and a lid strand comprising a protein-binding DNA aptamer to block the channel entrance. Addition of the trigger protein, thrombin, selectively opens the gate and enables a 330-fold increase inw the transport rate of small-molecule cargo. The molecular gate incorporates in delivery vesicles to controllably release enclosed cytotoxic drugs and kill eukaryotic cells. The generically designed gate may be applied in biomedicine, biosensing or for building synthetic cells.
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Affiliation(s)
- Conor Lanphere
- Department of ChemistryInstitute of Structural and Molecular BiologyUniversity College LondonLondonWC1H 0AJUK
| | - Patrick M. Arnott
- Department of Biochemical EngineeringUniversity College LondonLondonWC1E 7JEUK
| | - Sioned Fôn Jones
- Department of ChemistryInstitute of Structural and Molecular BiologyUniversity College LondonLondonWC1H 0AJUK
- Department of ChemistryKing's College LondonLondonSE1 1DBUK
| | - Katarina Korlova
- Department of ChemistryInstitute of Structural and Molecular BiologyUniversity College LondonLondonWC1H 0AJUK
| | - Stefan Howorka
- Department of ChemistryInstitute of Structural and Molecular BiologyUniversity College LondonLondonWC1H 0AJUK
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46
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Cole JM, Gosztola DJ, Sylvester SO. Low-energy optical switching of SO 2 linkage isomerisation in single crystals of a ruthenium-based coordination complex. RSC Adv 2021; 11:13183-13192. [PMID: 35423860 PMCID: PMC8697492 DOI: 10.1039/d1ra01696b] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2021] [Accepted: 03/26/2021] [Indexed: 01/13/2023] Open
Abstract
Single crystals that behave as optical switches are desirable for a wide range of applications, from optical sensors to read–write memory media. A series of ruthenium-based complexes that exhibit optical switching in their single-crystal form via SO2 linkage photoisomerisation are of prospective interest for these technologies. This study explores the optical switching behaviour in one such complex, trans-[Ru(SO2)(NH3)4(H2O)]tosylate2 (1), in terms of its dark and photoinduced crystal structure, as well as its light and thermal decay characteristics, which are deduced by photocrystallography, single-crystal optical absorption spectroscopy and microscopy. Photocrystallography results reveal that a photoisomerisation level of 21.5(5)% is achievable in 1. Biphasic photochromic crystals of 1 were generated by applying green and then red light to switch on and off the η2-(OS)O photoisomer in different regions of a crystal. Heat is a known alternative to its thermal decay, whereby a method is demonstrated that employs optical absorption spectra to determine its activation energy of 30 kJ mol−1. This low-energy barrier to optical switching agrees well with computational studies on 1, as well as being comparable to activation energies in ruthenium-based nitrosyl linkage photoisomers that also display solid-state optical switching. Single crystals that behave as optical switches are desirable for a wide range of applications, from optical sensors to read–write memory media.![]()
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Affiliation(s)
- Jacqueline M. Cole
- Cavendish Laboratory
- Department of Physics
- University of Cambridge
- Cambridge
- UK
| | | | - Sven O. Sylvester
- Cavendish Laboratory
- Department of Physics
- University of Cambridge
- Cambridge
- UK
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47
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Li G, Pan Z, Jia Z, Wang J, Wang J, Zhang N, Pan M, Yuan J. An effective approach for fabricating high-strength polyurethane hydrogels with reversible photochromic performance as a photoswitch. NEW J CHEM 2021. [DOI: 10.1039/d1nj00429h] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Abstract
Reversible high-strength photochromic polyurethane hydrogel which can realize information storage was successfully prepared by a polyaddition reaction.
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Affiliation(s)
- Guangyao Li
- Institute of Polymer Science and Engineering
- School of Chemical Engineering and Technology
- Hebei University of Technology
- Tianjin
- P. R. China
| | - Zhicheng Pan
- Institute of Polymer Science and Engineering
- School of Chemical Engineering and Technology
- Hebei University of Technology
- Tianjin
- P. R. China
| | - Zhanyu Jia
- Institute of Polymer Science and Engineering
- School of Chemical Engineering and Technology
- Hebei University of Technology
- Tianjin
- P. R. China
| | - Juan Wang
- Institute of Polymer Science and Engineering
- School of Chemical Engineering and Technology
- Hebei University of Technology
- Tianjin
- P. R. China
| | - Jianlong Wang
- Institute of Polymer Science and Engineering
- School of Chemical Engineering and Technology
- Hebei University of Technology
- Tianjin
- P. R. China
| | - Ning Zhang
- Institute of Polymer Science and Engineering
- School of Chemical Engineering and Technology
- Hebei University of Technology
- Tianjin
- P. R. China
| | - Mingwang Pan
- Institute of Polymer Science and Engineering
- School of Chemical Engineering and Technology
- Hebei University of Technology
- Tianjin
- P. R. China
| | - Jinfeng Yuan
- Institute of Polymer Science and Engineering
- School of Chemical Engineering and Technology
- Hebei University of Technology
- Tianjin
- P. R. China
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48
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Wang Y, Gu Y, Yang Y, Sun K, Li H. Glutathione transmembrane transmission gated by light-switches. J Photochem Photobiol A Chem 2021. [DOI: 10.1016/j.jphotochem.2020.112954] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]
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49
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Lanphere C, Arnott PM, Jones SF, Korlova K, Howorka S. A Biomimetic DNA-Based Membrane Gate for Protein-Controlled Transport of Cytotoxic Drugs. Angew Chem Int Ed Engl 2020; 60:1903-1908. [PMID: 33231913 PMCID: PMC7894144 DOI: 10.1002/anie.202011583] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2020] [Indexed: 11/23/2022]
Abstract
Chemistry is ideally placed to replicate biomolecular structures with tuneable building materials. Of particular interest are molecular nanopores, which transport cargo across membranes, as in DNA sequencing. Advanced nanopores control transport in response to triggers, but this cannot be easily replicated with biogenic proteins. Here we use DNA nanotechnology to build a synthetic molecular gate that opens in response to a specific protein. The gate self‐assembles from six DNA strands to form a bilayer‐spanning pore, and a lid strand comprising a protein‐binding DNA aptamer to block the channel entrance. Addition of the trigger protein, thrombin, selectively opens the gate and enables a 330‐fold increase inw the transport rate of small‐molecule cargo. The molecular gate incorporates in delivery vesicles to controllably release enclosed cytotoxic drugs and kill eukaryotic cells. The generically designed gate may be applied in biomedicine, biosensing or for building synthetic cells.
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Affiliation(s)
- Conor Lanphere
- Department of Chemistry, Institute of Structural and Molecular Biology, University College London, London, WC1H 0AJ, UK
| | - Patrick M Arnott
- Department of Biochemical Engineering, University College London, London, WC1E 7JE, UK
| | - Sioned Fôn Jones
- Department of Chemistry, Institute of Structural and Molecular Biology, University College London, London, WC1H 0AJ, UK.,Department of Chemistry, King's College London, London, SE1 1DB, UK
| | - Katarina Korlova
- Department of Chemistry, Institute of Structural and Molecular Biology, University College London, London, WC1H 0AJ, UK
| | - Stefan Howorka
- Department of Chemistry, Institute of Structural and Molecular Biology, University College London, London, WC1H 0AJ, UK
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Engineering of stimuli-responsive lipid-bilayer membranes using supramolecular systems. Nat Rev Chem 2020; 5:46-61. [PMID: 37118103 DOI: 10.1038/s41570-020-00233-6] [Citation(s) in RCA: 60] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/13/2020] [Indexed: 12/13/2022]
Abstract
The membrane proteins found in nature control many important cellular functions, including signal transduction and transmembrane ion transport, and these, in turn, are regulated by external stimuli, such as small molecules, membrane potential and light. Membrane proteins also find technological applications in fields ranging from optogenetics to synthetic biology. Synthetic supramolecular analogues have emerged as a complementary method to engineer functional membranes. This Review describes stimuli-responsive supramolecular systems developed for the control of ion transport, signal transduction and catalysis in lipid-bilayer-membrane systems. Recent advances towards achieving spatio-temporal control over activity in artificial and living cells are highlighted. Current challenges, the scope, limitations and future potential to exploit supramolecular systems for engineering stimuli-responsive lipid-bilayer membranes are discussed.
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