1
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Bressac M, Laurenceau-Cornec EC, Kennedy F, Santoro AE, Paul NL, Briggs N, Carvalho F, Boyd PW. Decoding drivers of carbon flux attenuation in the oceanic biological pump. Nature 2024; 633:587-593. [PMID: 39261723 PMCID: PMC11410664 DOI: 10.1038/s41586-024-07850-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/20/2022] [Accepted: 07/18/2024] [Indexed: 09/13/2024]
Abstract
The biological pump supplies carbon to the oceans' interior, driving long-term carbon sequestration and providing energy for deep-sea ecosystems1,2. Its efficiency is set by transformations of newly formed particles in the euphotic zone, followed by vertical flux attenuation via mesopelagic processes3. Depth attenuation of the particulate organic carbon (POC) flux is modulated by multiple processes involving zooplankton and/or microbes4,5. Nevertheless, it continues to be mainly parameterized using an empirically derived relationship, the 'Martin curve'6. The derived power-law exponent is the standard metric used to compare flux attenuation patterns across oceanic provinces7,8. Here we present in situ experimental findings from C-RESPIRE9, a dual particle interceptor and incubator deployed at multiple mesopelagic depths, measuring microbially mediated POC flux attenuation. We find that across six contrasting oceanic regimes, representing a 30-fold range in POC flux, degradation by particle-attached microbes comprised 7-29 per cent of flux attenuation, implying a more influential role for zooplankton in flux attenuation. Microbial remineralization, normalized to POC flux, ranged by 20-fold across sites and depths, with the lowest rates at high POC fluxes. Vertical trends, of up to threefold changes, were linked to strong temperature gradients at low-latitude sites. In contrast, temperature played a lesser role at mid- and high-latitude sites, where vertical trends may be set jointly by particle biochemistry, fragmentation and microbial ecophysiology. This deconstruction of the Martin curve reveals the underpinning mechanisms that drive microbially mediated POC flux attenuation across oceanic provinces.
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Affiliation(s)
- M Bressac
- Sorbonne Université, CNRS, Laboratoire d'Océanographie de Villefranche, Villefranche-sur-Mer, France.
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia.
| | - E C Laurenceau-Cornec
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia
- Univ. Brest, IUEM, CNRS, LEMAR, IRD, Ifremer, Plouzané, France
| | - F Kennedy
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia
| | - A E Santoro
- Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, CA, USA
| | - N L Paul
- Department of Ecology, Evolution and Marine Biology, University of California, Santa Barbara, CA, USA
| | - N Briggs
- National Oceanography Centre, European Way, Southampton, UK
| | - F Carvalho
- National Oceanography Centre, European Way, Southampton, UK
| | - P W Boyd
- Institute for Marine and Antarctic Studies, University of Tasmania, Hobart, Tasmania, Australia
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2
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Swain A, Woodhouse A, Fagan WF, Fraass AJ, Lowery CM. Biogeographic response of marine plankton to Cenozoic environmental changes. Nature 2024; 629:616-623. [PMID: 38632405 DOI: 10.1038/s41586-024-07337-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/02/2023] [Accepted: 03/20/2024] [Indexed: 04/19/2024]
Abstract
In palaeontological studies, groups with consistent ecological and morphological traits across a clade's history (functional groups)1 afford different perspectives on biodiversity dynamics than do species and genera2,3, which are evolutionarily ephemeral. Here we analyse Triton, a global dataset of Cenozoic macroperforate planktonic foraminiferal occurrences4, to contextualize changes in latitudinal equitability gradients1, functional diversity, palaeolatitudinal specialization and community equitability. We identify: global morphological communities becoming less specialized preceding the richness increase after the Cretaceous-Palaeogene extinction; ecological specialization during the Early Eocene Climatic Optimum, suggesting inhibitive equatorial temperatures during the peak of the Cenozoic hothouse; increased specialization due to circulation changes across the Eocene-Oligocene transition, preceding the loss of morphological diversity; changes in morphological specialization and richness about 19 million years ago, coeval with pelagic shark extinctions5; delayed onset of changing functional group richness and specialization between hemispheres during the mid-Miocene plankton diversification. The detailed nature of the Triton dataset permits a unique spatiotemporal view of Cenozoic pelagic macroevolution, in which global biogeographic responses of functional communities and richness are decoupled during Cenozoic climate events. The global response of functional groups to similar abiotic selection pressures may depend on the background climatic state (greenhouse or icehouse) to which a group is adapted.
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Affiliation(s)
- Anshuman Swain
- Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA.
- Museum of Comparative Zoology, Harvard University, Cambridge, MA, USA.
- Department of Paleobiology, National Museum of Natural History, Washington, DC, USA.
- Department of Biology, University of Maryland, College Park, MD, USA.
| | - Adam Woodhouse
- University of Texas Institute for Geophysics, University of Texas at Austin, Austin, TX, USA
- School of Earth Sciences, University of Bristol, Bristol, UK
| | - William F Fagan
- Department of Biology, University of Maryland, College Park, MD, USA
| | - Andrew J Fraass
- School of Earth and Ocean Sciences, University of Victoria, Victoria, British Columbia, Canada
| | - Christopher M Lowery
- University of Texas Institute for Geophysics, University of Texas at Austin, Austin, TX, USA
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3
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Weber MD, Richards TM, Sutton TT, Carter JE, Eytan RI. Deep-pelagic fishes: Demographic instability in a stable environment. Ecol Evol 2024; 14:e11267. [PMID: 38638366 PMCID: PMC11024635 DOI: 10.1002/ece3.11267] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2023] [Revised: 03/10/2024] [Accepted: 04/01/2024] [Indexed: 04/20/2024] Open
Abstract
Demographic histories are frequently a product of the environment, as populations expand or contract in response to major environmental changes, often driven by changes in climate. Meso- and bathy-pelagic fishes inhabit some of the most temporally and spatially stable habitats on the planet. The stability of the deep-pelagic could make deep-pelagic fishes resistant to the demographic instability commonly reported in fish species inhabiting other marine habitats, however the demographic histories of deep-pelagic fishes are unknown. We reconstructed the historical demography of 11 species of deep-pelagic fishes using mitochondrial and nuclear DNA sequence data. We uncovered widespread evidence of population expansions in our study species, a counterintuitive result based on the nature of deep-pelagic ecosystems. Frequency-based methods detected potential demographic changes in nine species of fishes, while extended Bayesian skyline plots identified population expansions in four species. These results suggest that despite the relatively stable nature of the deep-pelagic environment, the fishes that reside here have likely been impacted by past changes in climate. Further investigation is necessary to better understand how deep-pelagic fishes, by far Earth's most abundant vertebrates, will respond to future climatic changes.
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Affiliation(s)
- Max D. Weber
- Texas A&M University at GalvestonGalvestonTexasUSA
| | | | | | | | - Ron I. Eytan
- Texas A&M University at GalvestonGalvestonTexasUSA
- Department of Biological SciencesLouisiana State UniversityBaton RougeLouisianaUSA
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4
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Sutherland WJ, Bennett C, Brotherton PNM, Butchart SHM, Butterworth HM, Clarke SJ, Esmail N, Fleishman E, Gaston KJ, Herbert-Read JE, Hughes AC, James J, Kaartokallio H, Le Roux X, Lickorish FA, Newport S, Palardy JE, Pearce-Higgins JW, Peck LS, Pettorelli N, Primack RB, Primack WE, Schloss IR, Spalding MD, Ten Brink D, Tew E, Timoshyna A, Tubbs N, Watson JEM, Wentworth J, Wilson JD, Thornton A. A horizon scan of global biological conservation issues for 2024. Trends Ecol Evol 2024; 39:89-100. [PMID: 38114339 DOI: 10.1016/j.tree.2023.11.001] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/06/2023] [Revised: 10/30/2023] [Accepted: 11/07/2023] [Indexed: 12/21/2023]
Abstract
We present the results of our 15th horizon scan of novel issues that could influence biological conservation in the future. From an initial list of 96 issues, our international panel of scientists and practitioners identified 15 that we consider important for societies worldwide to track and potentially respond to. Issues are novel within conservation or represent a substantial positive or negative step-change with global or regional extents. For example, new sources of hydrogen fuel and changes in deep-sea currents may have profound impacts on marine and terrestrial ecosystems. Technological advances that may be positive include benchtop DNA printers and the industrialisation of approaches that can create high-protein food from air, potentially reducing the pressure on land for food production.
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Affiliation(s)
- William J Sutherland
- Conservation Science Group, Department of Zoology, Cambridge University, The David Attenborough Building, Pembroke Street, Cambridge CB2 3QZ, UK.
| | - Craig Bennett
- Royal Society of Wildlife Trusts, The Kiln, Waterside, Mather Road, Newark, Nottinghamshire NG24 1WT, UK
| | | | - Stuart H M Butchart
- Conservation Science Group, Department of Zoology, Cambridge University, The David Attenborough Building, Pembroke Street, Cambridge CB2 3QZ, UK; Birdlife International, The David Attenborough Building, Pembroke Street, Cambridge CB2 3QZ, UK
| | - Holly M Butterworth
- Natural Resources Wales, Cambria House, 29 Newport Road, Cardiff CF24 0TP, UK
| | | | - Nafeesa Esmail
- Wilder Institute, 1300 Zoo Road NE, Calgary, AB T2E 7V6, Canada
| | - Erica Fleishman
- College of Earth, Ocean, and Atmospheric Sciences, Oregon State University, Corvallis, OR 97331, USA
| | - Kevin J Gaston
- Environment and Sustainability Institute, University of Exeter, Penryn, Cornwall TR10 9FE, UK
| | | | - Alice C Hughes
- School of Biological Sciences, University of Hong Kong, Hong Kong Special Administrative Region of China, China
| | - Jennifer James
- The Environment Agency, Horizon House, Deanery Road, Bristol BS1 5TL, UK
| | | | - Xavier Le Roux
- Microbial Ecology Centre, Université Lyon 1, INRAE, CNRS, UMR 1418, 69622 Villeurbanne, France
| | - Fiona A Lickorish
- UK Research and Consultancy Services (RCS) Ltd, Valletts Cottage, Westhope, Hereford HR4 8BU, UK
| | - Sarah Newport
- UK Research and Innovation, Natural Environment Research Council, Polaris House, North Star Avenue, Swindon SN2 1EU, UK
| | - James E Palardy
- The Pew Charitable Trusts, 901 East Street NW, Washington, DC 20004, USA
| | - James W Pearce-Higgins
- Conservation Science Group, Department of Zoology, Cambridge University, The David Attenborough Building, Pembroke Street, Cambridge CB2 3QZ, UK; British Trust for Ornithology, The Nunnery, Thetford, Norfolk IP24 2PU, UK
| | - Lloyd S Peck
- British Antarctic Survey, Natural Environment Research Council, High Cross, Madingley Road, Cambridge CB3 0ET, UK
| | - Nathalie Pettorelli
- Institute of Zoology, Zoological Society of London, Regent's Park, London NW1 4RY, UK
| | | | | | - Irene R Schloss
- Instituto Antártico Argentino, Buenos Aires, Argentina; Centro Austral de Investigaciones Científicas (CADIC-CONICET), Ushuaia, Argentina; Universidad Nacional de Tierra del Fuego, Ushuaia, Argentina
| | - Mark D Spalding
- Conservation Science Group, Department of Zoology, Cambridge University, The David Attenborough Building, Pembroke Street, Cambridge CB2 3QZ, UK; The Nature Conservancy, Department of Physical, Earth, and Environmental Sciences, University of Siena, Pian dei Mantellini, Siena 53100, Italy
| | - Dirk Ten Brink
- Wetlands International, 6700 AL Wageningen, The Netherlands
| | - Eleanor Tew
- Conservation Science Group, Department of Zoology, Cambridge University, The David Attenborough Building, Pembroke Street, Cambridge CB2 3QZ, UK; Forestry England, 620 Bristol Business Park, Coldharbour Lane, Bristol BS16 1EJ, UK
| | - Anastasiya Timoshyna
- TRAFFIC, The David Attenborough Building, Pembroke Street, Cambridge CB2 3QZ, UK
| | - Nicolas Tubbs
- WWF-Belgium, Boulevard Emile Jacqmainlaan 90, 1000 Brussels, Belgium
| | - James E M Watson
- School of The Environment, University of Queensland, St Lucia, QLD 4072, Australia
| | - Jonathan Wentworth
- Parliamentary Office of Science and Technology, 14 Tothill Street, Westminster, London SW1H 9NB, UK
| | - Jeremy D Wilson
- RSPB Centre for Conservation Science, 2 Lochside View, Edinburgh EH12 9DH, UK
| | - Ann Thornton
- Conservation Science Group, Department of Zoology, Cambridge University, The David Attenborough Building, Pembroke Street, Cambridge CB2 3QZ, UK
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5
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Jiang HB, Hutchins DA, Ma W, Zhang RF, Wells M, Jiao N, Wang Y, Chai F. Natural ocean iron fertilization and climate variability over geological periods. GLOBAL CHANGE BIOLOGY 2023; 29:6856-6866. [PMID: 37855153 DOI: 10.1111/gcb.16990] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Revised: 09/20/2023] [Accepted: 09/27/2023] [Indexed: 10/20/2023]
Abstract
Marine primary producers are largely dependent on and shape the Earth's climate, although their relationship with climate varies over space and time. The growth of phytoplankton and associated marine primary productivity in most of the modern global ocean is limited by the supply of nutrients, including the micronutrient iron. The addition of iron via episodic and frequent events drives the biological carbon pump and promotes the sequestration of atmospheric carbon dioxide (CO2 ) into the ocean. However, the dependence between iron and marine primary producers adaptively changes over different geological periods due to the variation in global climate and environment. In this review, we examined the role and importance of iron in modulating marine primary production during some specific geological periods, that is, the Great Oxidation Event (GOE) during the Huronian glaciation, the Snowball Earth Event during the Cryogenian, the glacial-interglacial cycles during the Pleistocene, and the period from the last glacial maximum to the late Holocene. Only the change trend of iron bioavailability and climate in the glacial-interglacial cycles is consistent with the Iron Hypothesis. During the GOE and the Snowball Earth periods, although the bioavailability of iron in the ocean and the climate changed dramatically, the changing trend of many factors contradicted the Iron Hypothesis. By detangling the relationship among marine primary productivity, iron availability and oceanic environments in different geological periods, this review can offer some new insights for evaluating the impact of ocean iron fertilization on removing CO2 from the atmosphere and regulating the climate.
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Affiliation(s)
- Hai-Bo Jiang
- Key Laboratory of Marine Biotechnology of Zhejiang Province, School of Marine Sciences, Ningbo University, Ningbo, Zhejiang, China
- State Key Laboratory of Satellite Ocean Environment Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, Zhejiang, China
- Southern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Zhuhai, Guangdong, China
| | - David A Hutchins
- Department of Biological Sciences, University of Southern California, Los Angeles, California, USA
| | - Wentao Ma
- State Key Laboratory of Satellite Ocean Environment Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, Zhejiang, China
| | - Rui-Feng Zhang
- School of Oceanography, Shanghai Jiaotong University, Shanghai, Shanghai, China
| | - Mark Wells
- State Key Laboratory of Satellite Ocean Environment Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, Zhejiang, China
- School of Marine Sciences, University of Maine, Orono, Maine, USA
| | - Nianzhi Jiao
- State Key Laboratory of Marine Environmental Sciences, Xiamen University, Xiamen, Fujian, China
| | - Yuntao Wang
- State Key Laboratory of Satellite Ocean Environment Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, Zhejiang, China
| | - Fei Chai
- State Key Laboratory of Satellite Ocean Environment Dynamics, Second Institute of Oceanography, Ministry of Natural Resources, Hangzhou, Zhejiang, China
- State Key Laboratory of Marine Environmental Sciences, Xiamen University, Xiamen, Fujian, China
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6
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Stenvers VI, Hauss H, Bayer T, Havermans C, Hentschel U, Schmittmann L, Sweetman AK, Hoving HJT. Experimental mining plumes and ocean warming trigger stress in a deep pelagic jellyfish. Nat Commun 2023; 14:7352. [PMID: 37990021 PMCID: PMC10663454 DOI: 10.1038/s41467-023-43023-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/06/2023] [Accepted: 10/30/2023] [Indexed: 11/23/2023] Open
Abstract
The deep pelagic ocean is increasingly subjected to human-induced environmental change. While pelagic animals provide important ecosystem functions including climate regulation, species-specific responses to stressors remain poorly documented. Here, we investigate the effects of simulated ocean warming and sediment plumes on the cosmopolitan deep-sea jellyfish Periphylla periphylla, combining insights gained from physiology, gene expression and changes in associated microbiota. Metabolic demand was elevated following a 4 °C rise in temperature, promoting genes related to innate immunity but suppressing aerobic respiration. Suspended sediment plumes provoked the most acute and energetically costly response through the production of excess mucus (at ≥17 mg L-1), while inducing genes related to aerobic respiration and wound repair (at ≥167 mg L-1). Microbial symbionts appeared to be unaffected by both stressors, with mucus production maintaining microbial community composition. If these responses are representative for other gelatinous fauna, an abundant component of pelagic ecosystems, the effects of planned exploitation of seafloor resources may impair deep pelagic biodiversity and ecosystem functioning.
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Affiliation(s)
- Vanessa I Stenvers
- GEOMAR, Helmholtz Centre for Ocean Research Kiel, Wischhofstraße 1-3, 24148, Kiel, Germany.
- Department of Invertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, DC, P.O. Box 37012, USA.
| | - Helena Hauss
- GEOMAR, Helmholtz Centre for Ocean Research Kiel, Wischhofstraße 1-3, 24148, Kiel, Germany
- Norwegian Research Centre AS (NORCE), Stavanger, Norway
| | - Till Bayer
- GEOMAR, Helmholtz Centre for Ocean Research Kiel, Wischhofstraße 1-3, 24148, Kiel, Germany
| | - Charlotte Havermans
- HYIG ARJEL, Functional Ecology, Alfred Wegner Institute Helmholtz Centre for Polar and Marine Research, Am Handelshafen 12, 27570, Bremerhaven, Germany
| | - Ute Hentschel
- GEOMAR, Helmholtz Centre for Ocean Research Kiel, Wischhofstraße 1-3, 24148, Kiel, Germany
| | - Lara Schmittmann
- GEOMAR, Helmholtz Centre for Ocean Research Kiel, Wischhofstraße 1-3, 24148, Kiel, Germany
| | - Andrew K Sweetman
- Seafloor Ecology and Biogeochemistry Research Group, Scottish Association for Marine Science (SAMS), Oban, Scotland, UK
| | - Henk-Jan T Hoving
- GEOMAR, Helmholtz Centre for Ocean Research Kiel, Wischhofstraße 1-3, 24148, Kiel, Germany
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7
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Wiese F, Schlüter N, Zirkel J, Herrle JO, Friedrich O. A 104-Ma record of deep-sea Atelostomata (Holasterioda, Spatangoida, irregular echinoids) - a story of persistence, food availability and a big bang. PLoS One 2023; 18:e0288046. [PMID: 37556403 PMCID: PMC10411753 DOI: 10.1371/journal.pone.0288046] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/09/2022] [Accepted: 06/19/2023] [Indexed: 08/11/2023] Open
Abstract
Deep-sea macrobenthic body fossils are scarce due to the lack of deep-sea sedimentary archives in onshore settings. Therefore, hypothesized migrations of shallow shelf taxa into the deep-sea after phases of mass extinction (onshore-offshore pattern in the literature) due to anoxic events is not constrained by the fossil record. To resolve this conundrum, we investigated 1,475 deep-sea sediment samples from the Atlantic, Pacific and Southern oceans (water depth ranging from 200 to 4,700 m), providing 41,460 spine fragments of the crown group Atelostomata (Holasteroida, Spatangoida). We show that the scarce fossil record of deep-sea echinoids is in fact a methodological artefact because it is limited by the almost exclusive use of onshore fossil archives. Our data advocate for a continuous record of deep-sea Atelostomata back to at least 104 Ma (late early Cretaceous), and literature records suggest even an older age (115 Ma). A gradual increase of different spine tip morphologies from the Albian to the Maastrichtian is observed. A subsequent, abrupt reduction in spine size and the loss of morphological inventory in the lowermost Paleogene is interpreted to be an expression of the "Lilliput Effect", related to nourishment depletion on the sea floor in the course of the Cretaceous-Paleogene (K-Pg) Boundary Event. The recovery from this event lasted at least 5 Ma, and post-K-Pg Boundary Event assemblages progress-without any further morphological breaks-towards the assemblages observed in modern deep-sea environments. Because atelostomate spine morphology is often species-specific, the variations in spine tip morphology trough time would indicate species changes taking place in the deep-sea. This observation is, therefore, interpreted to result from in-situ evolution in the deep-sea and not from onshore-offshore migrations. The calculation of the "atelostomate spine accumulation rate" (ASAR) reveals low values in pre-Campanian times, possibly related to high remineralization rates of organic matter in the water column in the course of the mid-Cretaceous Thermal Maximum and its aftermath. A Maastrichtian cooling pulse marks the irreversible onset of fluctuating but generally higher atelostomate biomass that continues throughout the Cenozoic.
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Affiliation(s)
- Frank Wiese
- Department of Geobiology, Geoscience Centre, Georg-August-Universität Göttingen, Göttingen, Germany
- Institut für Geowissenschaften, Ruprecht-Karls-Universität Heidelberg, Heidelberg, Germany
| | - Nils Schlüter
- Museum für Naturkunde, Leibniz Institute for Evolution and Biodiversity Science, Humboldt-Universität zu Berlin, Berlin, Germany
| | - Jessica Zirkel
- Institute of Geosciences, Goethe-University Frankfurt, Frankfurt, Germany
| | - Jens O. Herrle
- Institute of Geosciences, Goethe-University Frankfurt, Frankfurt, Germany
| | - Oliver Friedrich
- Institut für Geowissenschaften, Ruprecht-Karls-Universität Heidelberg, Heidelberg, Germany
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8
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Hess AV, Auderset A, Rosenthal Y, Miller KG, Zhou X, Sigman DM, Martínez-García A. A well-oxygenated eastern tropical Pacific during the warm Miocene. Nature 2023; 619:521-525. [PMID: 37380780 DOI: 10.1038/s41586-023-06104-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/04/2022] [Accepted: 04/20/2023] [Indexed: 06/30/2023]
Abstract
The oxygen content of the oceans is susceptible to climate change and has declined in recent decades1, with the largest effect in oxygen-deficient zones (ODZs)2, that is, mid-depth ocean regions with oxygen concentrations <5 μmol kg-1 (ref. 3). Earth-system-model simulations of climate warming predict that ODZs will expand until at least 2100. The response on timescales of hundreds to thousands of years, however, remains uncertain3-5. Here we investigate changes in the response of ocean oxygenation during the warmer-than-present Miocene Climatic Optimum (MCO; 17.0-14.8 million years ago (Ma)). Our planktic foraminifera I/Ca and δ15N data, palaeoceanographic proxies sensitive to ODZ extent and intensity, indicate that dissolved-oxygen concentrations in the eastern tropical Pacific (ETP) exceeded 100 µmol kg-1 during the MCO. Paired Mg/Ca-derived temperature data suggest that an ODZ developed in response to an increased west-to-east temperature gradient and shoaling of the ETP thermocline. Our records align with model simulations of data from recent decades to centuries6,7, suggesting that weaker equatorial Pacific trade winds during warm periods may lead to decreased upwelling in the ETP, causing equatorial productivity and subsurface oxygen demand to be less concentrated in the east. These findings shed light on how warm-climate states such as during the MCO may affect ocean oxygenation. If the MCO is considered as a possible analogue for future warming, our findings seem to support models suggesting that the recent deoxygenation trend and expansion of the ETP ODZ may eventually reverse3,4.
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Affiliation(s)
- Anya V Hess
- Department of Earth and Planetary Sciences, Rutgers, The State University of New Jersey, Piscataway, NJ, USA.
| | - Alexandra Auderset
- Climate Geochemistry Department, Max Planck Institute for Chemistry, Mainz, Germany
- Department of Geosciences, Princeton University, Princeton, NJ, USA
| | - Yair Rosenthal
- Department of Earth and Planetary Sciences, Rutgers, The State University of New Jersey, Piscataway, NJ, USA
- Department of Marine and Coastal Sciences, Rutgers, The State University of New Jersey, New Brunswick, NJ, USA
| | - Kenneth G Miller
- Department of Earth and Planetary Sciences, Rutgers, The State University of New Jersey, Piscataway, NJ, USA
| | - Xiaoli Zhou
- State Key Laboratory of Marine Geology, Tongji University, Shanghai, China
| | - Daniel M Sigman
- Department of Geosciences, Princeton University, Princeton, NJ, USA
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9
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Cribb AT, van de Velde SJ, Berelson WM, Bottjer DJ, Corsetti FA. Ediacaran-Cambrian bioturbation did not extensively oxygenate sediments in shallow marine ecosystems. GEOBIOLOGY 2023; 21:435-453. [PMID: 36815223 DOI: 10.1111/gbi.12550] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/28/2022] [Revised: 01/03/2023] [Accepted: 01/27/2023] [Indexed: 06/13/2023]
Abstract
The radiation of bioturbation during the Ediacaran-Cambrian transition has long been hypothesized to have oxygenated sediments, triggering an expansion of the habitable benthic zone and promoting increased infaunal tiering in early Paleozoic benthic communities. However, the effects of bioturbation on sediment oxygen are underexplored with respect to the importance of biomixing and bioirrigation, two bioturbation processes which can have opposite effects on sediment redox chemistry. We categorized trace fossils from the Ediacaran and Terreneuvian as biomixing or bioirrigation fossils and integrated sedimentological proxies for bioturbation intensity with biogeochemical modeling to simulate oxygen penetration depths through the Ediacaran-Cambrian transition. Ultimately, we find that despite dramatic increases in ichnodiversity in the Terreneuvian, biomixing remains the dominant bioturbation behavior, and in contrast to traditional assumptions, Ediacaran-Cambrian bioturbation was unlikely to have resulted in extensive oxygenation of shallow marine sediments globally.
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Affiliation(s)
- Alison T Cribb
- Department of Earth Sciences, University of Southern California, Los Angeles, California, USA
| | - Sebastiaan J van de Velde
- Department of Geosciences, Environment and Society, Universté Libre de Bruxelles, Brussels, Belgium
- Operational Directorate Natural Environment, Royal Belgian Institute of Natural Sciences, Brussels, Belgium
| | - William M Berelson
- Department of Earth Sciences, University of Southern California, Los Angeles, California, USA
| | - David J Bottjer
- Department of Earth Sciences, University of Southern California, Los Angeles, California, USA
| | - Frank A Corsetti
- Department of Earth Sciences, University of Southern California, Los Angeles, California, USA
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10
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Bauer KW, McKenzie NR, Bottini C, Erba E, Crowe SA. Carbon pump dynamics and limited organic carbon burial during OAE1a. GEOBIOLOGY 2023; 21:341-354. [PMID: 36567458 DOI: 10.1111/gbi.12538] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/29/2022] [Revised: 11/08/2022] [Accepted: 12/03/2022] [Indexed: 06/17/2023]
Abstract
Oceanic Anoxic Events (OAEs) are conspicuous intervals in the geologic record that are associated with the deposition of organic carbon (OC)-rich marine sediment, linked to extreme biogeochemical perturbations, and characterized by widespread ocean deoxygenation. Mechanistic links between the marine biological carbon pump (BCP), redox conditions, and organic carbon burial during OAEs, however, remain poorly constrained. In this work we reconstructed the BCP in the western Tethys Ocean across OAE1a (~120 Mya) using sediment geochemistry and OC mass accumulation rates (OCAcc ). We find that OCAcc were between 0.006 and 3.3 gC m-2 yr-1 , with a mean value of 0.79 ± 0.78 SD gC m-2 yr-1 -these rates are low and comparable to oligotrophic regions in the modern oceans. This challenges longstanding assumptions that oceanic anoxic events are intervals of strongly elevated organic carbon burial. Numerical modelling of the BCP, furthermore, reveals that such low OC fluxes are only possible with either or both low to moderate OC export fluxes from ocean surface waters, with rates similar to oligotrophic (nutrient-poor, <30 gC m-2 yr-1 ) and mesotrophic (moderate-nutrients, ~50-100 gC m-2 yr-1 ) regions in the modern ocean, and stronger than modern vertical OC attenuation. The low OC fluxes thus reflect a relatively weak BCP. Low to moderate productivity is further supported by palaeoecological and geochemical evidence and was likely maintained through nutrient limitation that developed in response to the burial and sequestration of phosphorus in association with iron minerals under ferruginous (anoxic iron-rich) ocean conditions. Without persistently high productivity, ocean deoxygenation during OAE1a was more likely driven by other physicochemical and biological factors including ocean warming, changes in marine primary producer community composition, and fundamental shifts in the efficiency of the BCP with associated effects and feedbacks.
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Affiliation(s)
- Kohen W Bauer
- Department of Earth Science, University of Hong Kong, Hong Kong, Hong Kong SAR
- Ocean Networks Canada, University of Victoria Queenswood Campus, Victoria, British Columbia, Canada
| | - N Ryan McKenzie
- Department of Earth Science, University of Hong Kong, Hong Kong, Hong Kong SAR
| | - Cinzia Bottini
- Department of Earth Sciences, University of Milan, Milan, Italy
| | - Elisabetta Erba
- Department of Earth Sciences, University of Milan, Milan, Italy
| | - Sean A Crowe
- Department of Earth Science, University of Hong Kong, Hong Kong, Hong Kong SAR
- Department of EOAS, University of British Columbia, Vancouver, British Columbia, Canada
- Department of M&I, University of British Columbia, Vancouver, British Columbia, Canada
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11
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Crichton KA, Wilson JD, Ridgwell A, Boscolo-Galazzo F, John EH, Wade BS, Pearson PN. What the geological past can tell us about the future of the ocean's twilight zone. Nat Commun 2023; 14:2376. [PMID: 37105972 PMCID: PMC10140295 DOI: 10.1038/s41467-023-37781-6] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/18/2021] [Accepted: 03/30/2023] [Indexed: 04/29/2023] Open
Abstract
Paleontological reconstructions of plankton community structure during warm periods of the Cenozoic (last 66 million years) reveal that deep-dwelling 'twilight zone' (200-1000 m) plankton were less abundant and diverse, and lived much closer to the surface, than in colder, more recent climates. We suggest that this is a consequence of temperature's role in controlling the rate that sinking organic matter is broken down and metabolized by bacteria, a process that occurs faster at warmer temperatures. In a warmer ocean, a smaller fraction of organic matter reaches the ocean interior, affecting food supply and dissolved oxygen availability at depth. Using an Earth system model that has been evaluated against paleo observations, we illustrate how anthropogenic warming may impact future carbon cycling and twilight zone ecology. Our findings suggest that significant changes are already underway, and without strong emissions mitigation, widespread ecological disruption in the twilight zone is likely by 2100, with effects spanning millennia thereafter.
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Affiliation(s)
- Katherine A Crichton
- School of Earth and Environmental Science, Cardiff University, Cardiff, UK.
- Now at Department of Geography, University of Exeter, Exeter, UK.
| | - Jamie D Wilson
- School of Earth Sciences, University of Bristol, Bristol, UK
- Department of Earth, Ocean and Ecological Sciences, University of Liverpool, Liverpool, UK
| | - Andy Ridgwell
- Department of Earth and Planetary Sciences, University of California, Riverside, CA, USA
| | - Flavia Boscolo-Galazzo
- School of Earth and Environmental Science, Cardiff University, Cardiff, UK
- Now at MARUM, University of Bremen, Bremen, Germany
| | - Eleanor H John
- School of Earth and Environmental Science, Cardiff University, Cardiff, UK
| | - Bridget S Wade
- Department of Earth Sciences, University College London, London, UK
| | - Paul N Pearson
- School of Earth and Environmental Science, Cardiff University, Cardiff, UK
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12
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Fenton IS, Aze T, Farnsworth A, Valdes P, Saupe EE. Origination of the modern-style diversity gradient 15 million years ago. Nature 2023; 614:708-712. [PMID: 36792825 DOI: 10.1038/s41586-023-05712-6] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/04/2022] [Accepted: 01/06/2023] [Indexed: 02/17/2023]
Abstract
The latitudinal diversity gradient (LDG) is a prevalent feature of modern ecosystems across diverse clades1-4. Recognized for well over a century, the causal mechanisms for LDGs remain disputed, in part because numerous putative drivers simultaneously covary with latitude1,3,5. The past provides the opportunity to disentangle LDG mechanisms because the relationships among biodiversity, latitude and possible causal factors have varied over time6-9. Here we quantify the emergence of the LDG in planktonic foraminifera at high spatiotemporal resolution over the past 40 million years, finding that a modern-style gradient arose only 15 million years ago. Spatial and temporal models suggest that LDGs for planktonic foraminifera may be controlled by the physical structure of the water column. Steepening of the latitudinal temperature gradient over 15 million years ago, associated with an increased vertical temperature gradient at low latitudes, may have enhanced niche partitioning and provided more opportunities for speciation at low latitudes. Supporting this hypothesis, we find that higher rates of low-latitude speciation steepened the diversity gradient, consistent with spatiotemporal patterns of depth partitioning by planktonic foraminifera. Extirpation of species from high latitudes also strengthened the LDG, but this effect tended to be weaker than speciation. Our results provide a step change in understanding the evolution of marine LDGs over long timescales.
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Affiliation(s)
- Isabel S Fenton
- Department of Earth Sciences, University of Oxford, Oxford, UK
| | - Tracy Aze
- School of Earth and Environment, University of Leeds, Leeds, UK
| | - Alexander Farnsworth
- School of Geographical Sciences, University of Bristol, Bristol, UK.,State Key Laboratory of Tibetan Plateau Earth System, Environment and Resources, Institute of Tibetan Plateau Research, Chinese Academy of Sciences, Beijing, China
| | - Paul Valdes
- School of Geographical Sciences, University of Bristol, Bristol, UK
| | - Erin E Saupe
- Department of Earth Sciences, University of Oxford, Oxford, UK.
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13
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Woodhouse A, Swain A, Fagan WF, Fraass AJ, Lowery CM. Late Cenozoic cooling restructured global marine plankton communities. Nature 2023; 614:713-718. [PMID: 36792824 DOI: 10.1038/s41586-023-05694-5] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2022] [Accepted: 01/03/2023] [Indexed: 02/17/2023]
Abstract
The geographic ranges of marine organisms, including planktonic foraminifera1, diatoms, dinoflagellates2, copepods3 and fish4, are shifting polewards owing to anthropogenic climate change5. However, the extent to which species will move and whether these poleward range shifts represent precursor signals that lead to extinction is unclear6. Understanding the development of marine biodiversity patterns over geological time and the factors that influence them are key to contextualizing these current trends. The fossil record of the macroperforate planktonic foraminifera provides a rich and phylogenetically resolved dataset that provides unique opportunities for understanding marine biogeography dynamics and how species distributions have responded to ancient climate changes. Here we apply a bipartite network approach to quantify group diversity, latitudinal specialization and latitudinal equitability for planktonic foraminifera over the past eight million years using Triton, a recently developed high-resolution global dataset of planktonic foraminiferal occurrences7. The results depict a global, clade-wide shift towards the Equator in ecological and morphological community equitability over the past eight million years in response to temperature changes during the late Cenozoic bipolar ice sheet formation. Collectively, the Triton data indicate the presence of a latitudinal equitability gradient among planktonic foraminiferal functional groups which is coupled to the latitudinal biodiversity gradient only through the geologically recent past (the past two million years). Before this time, latitudinal equitability gradients indicate that higher latitudes promoted community equitability across ecological and morphological groups. Observed range shifts among marine planktonic microorganisms1,2,8 in the recent and geological past suggest substantial poleward expansion of marine communities even under the most conservative future global warming scenarios.
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Affiliation(s)
- Adam Woodhouse
- University of Texas Institute for Geophysics, University of Texas at Austin, Austin, TX, USA.
| | - Anshuman Swain
- Department of Biology, University of Maryland, College Park, MD, USA.,Department of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA, USA.,Museum of Comparative Zoology, Harvard University, Cambridge, MA, USA.,Department of Paleobiology, National Museum of Natural History, Washington, DC, USA
| | - William F Fagan
- Department of Biology, University of Maryland, College Park, MD, USA
| | - Andrew J Fraass
- School of Earth and Ocean Sciences, University of Victoria, Victoria, British Columbia, Canada.,Invertebrate Paleontology, The Academy of Natural Sciences of Drexel University, Philadelphia, PA, USA.,School of Earth Science, University of Bristol, Bristol, UK
| | - Christopher M Lowery
- University of Texas Institute for Geophysics, University of Texas at Austin, Austin, TX, USA
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14
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Li Z, Zhang YG, Torres M, Mills BJW. Neogene burial of organic carbon in the global ocean. Nature 2023; 613:90-95. [PMID: 36600067 DOI: 10.1038/s41586-022-05413-6] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/14/2022] [Accepted: 10/05/2022] [Indexed: 01/05/2023]
Abstract
Organic carbon buried in marine sediment serves as a net sink for atmospheric carbon dioxide and a source of oxygen1,2. The rate of organic carbon burial through geologic history is conventionally established by using the mass balance between inorganic and organic carbon, each with distinct carbon isotopic values (δ13C)3,4. This method is complicated by large uncertainties, however, and has not been tested with organic carbon accumulation data5,6. Here we report a 'bottom-up' approach for calculating the rate of organic carbon burial that is independent from mass balance calculations. We use data from 81 globally distributed sites to establish the history of organic carbon burial during the Neogene (roughly 23-3 Ma). Our results show larger spatiotemporal variability of organic carbon burial than previously estimated7-9. Globally, the burial rate is high towards the early Miocene and Pliocene and lowest during the mid-Miocene, with the latter period characterized by the lowest ratio of organic-to-carbonate burial rates. This is in contrast to earlier work that interpreted enriched carbonate 13C values of the mid-Miocene as massive organic carbon burial (that is, the Monterey Hypothesis)10,11. Suppressed organic carbon burial during the warm mid-Miocene is probably related to temperature-dependent bacterial degradation of organic matter12,13, suggesting that the organic carbon cycle acted as positive feedback of past global warming.
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Affiliation(s)
- Ziye Li
- College of Marine Geosciences, Key Laboratory of Submarine Geosciences and Prospecting Techniques, Ocean University of China, Qingdao, China.,Department of Oceanography, Texas A&M University, College Station, TX, USA.,MARUM-Center for Marine Environmental Sciences, University of Bremen, Bremen, Germany
| | - Yi Ge Zhang
- Department of Oceanography, Texas A&M University, College Station, TX, USA.
| | - Mark Torres
- Department of Earth, Environmental, and Planetary Sciences, Rice University, Houston, TX, USA
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15
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Alternating regimes of shallow and deep-sea diversification explain a species-richness paradox in marine fishes. Proc Natl Acad Sci U S A 2022; 119:e2123544119. [PMID: 36252009 PMCID: PMC9618140 DOI: 10.1073/pnas.2123544119] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022] Open
Abstract
The deep sea contains a surprising diversity of life, including iconic fish groups such as anglerfishes and lanternfishes. Still, >65% of marine teleost fish species are restricted to the photic zone <200 m, which comprises less than 10% of the ocean's total volume. From a macroevolutionary perspective, this paradox may be explained by three hypotheses: 1) shallow water lineages have had more time to diversify than deep-sea lineages, 2) shallow water lineages have faster rates of speciation than deep-sea lineages, or 3) shallow-to-deep sea transition rates limit deep-sea richness. Here we use phylogenetic comparative methods to test among these three non-mutually exclusive hypotheses. While we found support for all hypotheses, the disparity in species richness is better described as the uneven outcome of alternating phases that favored shallow or deep diversification over the past 200 million y. Shallow marine teleosts became incredibly diverse 100 million y ago during a period of warm temperatures and high sea level, suggesting the importance of reefs and epicontinental settings. Conversely, deep-sea colonization and speciation was favored during brief episodes when cooling temperatures increased the efficiency of the ocean's carbon pump. Finally, time-variable ecological filters limited shallow-to-deep colonization for much of teleost history, which helped maintain higher shallow richness. A pelagic lifestyle and large jaws were associated with early deep-sea colonists, while a demersal lifestyle and a tapered body plan were typical of later colonists. Therefore, we also suggest that some hallmark characteristics of deep-sea fishes evolved prior to colonizing the deep sea.
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16
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Sperling EA, Boag TH, Duncan MI, Endriga CR, Marquez JA, Mills DB, Monarrez PM, Sclafani JA, Stockey RG, Payne JL. Breathless through Time: Oxygen and Animals across Earth's History. THE BIOLOGICAL BULLETIN 2022; 243:184-206. [PMID: 36548971 DOI: 10.1086/721754] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/17/2023]
Abstract
AbstractOxygen levels in the atmosphere and ocean have changed dramatically over Earth history, with major impacts on marine life. Because the early part of Earth's history lacked both atmospheric oxygen and animals, a persistent co-evolutionary narrative has developed linking oxygen change with changes in animal diversity. Although it was long believed that oxygen rose to essentially modern levels around the Cambrian period, a more muted increase is now believed likely. Thus, if oxygen increase facilitated the Cambrian explosion, it did so by crossing critical ecological thresholds at low O2. Atmospheric oxygen likely remained at low or moderate levels through the early Paleozoic era, and this likely contributed to high metazoan extinction rates until oxygen finally rose to modern levels in the later Paleozoic. After this point, ocean deoxygenation (and marine mass extinctions) is increasingly linked to large igneous province eruptions-massive volcanic carbon inputs to the Earth system that caused global warming, ocean acidification, and oxygen loss. Although the timescales of these ancient events limit their utility as exact analogs for modern anthropogenic global change, the clear message from the geologic record is that large and rapid CO2 injections into the Earth system consistently cause the same deadly trio of stressors that are observed today. The next frontier in understanding the impact of oxygen changes (or, more broadly, temperature-dependent hypoxia) in deep time requires approaches from ecophysiology that will help conservation biologists better calibrate the response of the biosphere at large taxonomic, spatial, and temporal scales.
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17
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Abstract
Archaeal membrane lipids are widely used for paleotemperature reconstructions, yet these molecular fossils also bear rich information about ecology and evolution of marine ammonia-oxidizing archaea (AOA). Here we identified thermal and nonthermal behaviors of archaeal glycerol dialkyl glycerol tetraethers (GDGTs) by comparing the GDGT-based temperature index (TEX86) to the ratio of GDGTs with two and three cyclopentane rings (GDGT-2/GDGT-3). Thermal-dependent biosynthesis should increase TEX86 and decrease GDGT-2/GDGT-3 when the ambient temperature increases. This presumed temperature-dependent (PTD) trend is observed in GDGTs derived from cultures of thermophilic and mesophilic AOA. The distribution of GDGTs in suspended particulate matter (SPM) and sediments collected from above the pycnocline-shallow water samples-also follows the PTD trend. These similar GDGT distributions between AOA cultures and shallow water environmental samples reflect shallow ecotypes of marine AOA. While there are currently no cultures of deep AOA clades, GDGTs derived from deep water SPM and marine sediment samples exhibit nonthermal behavior deviating from the PTD trend. The presence of deep AOA increases the GDGT-2/GDGT-3 ratio and distorts the temperature-controlled correlation between GDGT-2/GDGT-3 and TEX86. We then used Gaussian mixture models to statistically characterize these diagnostic patterns of modern AOA ecology from paleo-GDGT records to infer the evolution of marine AOA from the Mid-Mesozoic to the present. Long-term GDGT-2/GDGT-3 trends suggest a suppression of today's deep water marine AOA during the Mesozoic-early Cenozoic greenhouse climates. Our analysis provides invaluable insights into the evolutionary timeline and the expansion of AOA niches associated with major oceanographic and climate changes.
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18
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Nguyen TTH, Zakem EJ, Ebrahimi A, Schwartzman J, Caglar T, Amarnath K, Alcolombri U, Peaudecerf FJ, Hwa T, Stocker R, Cordero OX, Levine NM. Microbes contribute to setting the ocean carbon flux by altering the fate of sinking particulates. Nat Commun 2022; 13:1657. [PMID: 35351873 PMCID: PMC8964765 DOI: 10.1038/s41467-022-29297-2] [Citation(s) in RCA: 21] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2021] [Accepted: 03/02/2022] [Indexed: 11/25/2022] Open
Abstract
Sinking particulate organic carbon out of the surface ocean sequesters carbon on decadal to millennial timescales. Predicting the particulate carbon flux is therefore critical for understanding both global carbon cycling and the future climate. Microbes play a crucial role in particulate organic carbon degradation, but the impact of depth-dependent microbial dynamics on ocean-scale particulate carbon fluxes is poorly understood. Here we scale-up essential features of particle-associated microbial dynamics to understand the large-scale vertical carbon flux in the ocean. Our model provides mechanistic insight into the microbial contribution to the particulate organic carbon flux profile. We show that the enhanced transfer of carbon to depth can result from populations struggling to establish colonies on sinking particles due to diffusive nutrient loss, cell detachment, and mortality. These dynamics are controlled by the interaction between multiple biotic and abiotic factors. Accurately capturing particle-microbe interactions is essential for predicting variability in large-scale carbon cycling. Micro-scale microbial community dynamics can substantially alter the fate of sinking particulates in the ocean thus playing a key role in setting the vertical flux of particulate carbon in the ocean.
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19
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Fang Y, Jiang J, Hou X, Guo J, Li X, Zhao D, Xie X. Plant protein-coding gene families: Their origin and evolution. FRONTIERS IN PLANT SCIENCE 2022; 13:995746. [PMID: 36160967 PMCID: PMC9490259 DOI: 10.3389/fpls.2022.995746] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/16/2022] [Accepted: 08/15/2022] [Indexed: 05/13/2023]
Abstract
Steady advances in genome sequencing methods have provided valuable insights into the evolutionary processes of several gene families in plants. At the core of plant biodiversity is an extensive genetic diversity with functional divergence and expansion of genes across gene families, representing unique phenomena. The evolution of gene families underpins the evolutionary history and development of plants and is the subject of this review. We discuss the implications of the molecular evolution of gene families in plants, as well as the potential contributions, challenges, and strategies associated with investigating phenotypic alterations to explain the origin of plants and their tolerance to environmental stresses.
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Affiliation(s)
- Yuanpeng Fang
- Key Laboratory of Agricultural Microbiology, College of Agriculture, Guizhou University, Guiyang, China
| | - Junmei Jiang
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Guiyang, China
| | - Xiaolong Hou
- Key Laboratory of Agricultural Microbiology, College of Agriculture, Guizhou University, Guiyang, China
| | - Jiyuan Guo
- Department of Resources and Environment, Moutai Institute, Zunyi, China
| | - Xiangyang Li
- State Key Laboratory Breeding Base of Green Pesticide and Agricultural Bioengineering, Key Laboratory of Green Pesticide and Agricultural Bioengineering, Ministry of Education, Guizhou University, Guiyang, China
| | - Degang Zhao
- Key Laboratory of Mountain Plant Resources Protection and Germplasm Innovation, Ministry of Education, College of Life Sciences, Institute of Agricultural Bioengineering, Guizhou University, Guiyang, China
- Guizhou Conservation Technology Application Engineering Research Center, Guizhou Institute of Prataculture/Guizhou Institute of Biotechnology/Guizhou Academy of Agricultural Sciences, Guiyang, China
- *Correspondence: Degang Zhao,
| | - Xin Xie
- Key Laboratory of Agricultural Microbiology, College of Agriculture, Guizhou University, Guiyang, China
- Guizhou Conservation Technology Application Engineering Research Center, Guizhou Institute of Prataculture/Guizhou Institute of Biotechnology/Guizhou Academy of Agricultural Sciences, Guiyang, China
- Xin Xie,
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20
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Climate Change-Greenhouse Gas Emissions Analysis and Forecast in Romania. SUSTAINABILITY 2021. [DOI: 10.3390/su132112186] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
Greenhouse gases (GHG), such as carbon dioxide, methane, nitrous oxide, and other gases, are considered to be the main cause of global climate change, and this problem has received significant global attention. Carbon dioxide has been considered the most significant gas contributing to global climate change. Our paper presents an analysis of the greenhouse gas emissions in Romania along with a forecast for the years to come. For the study, data from the National Institute of Statistics and Eurostat were gathered and used for the analysis in order to present the results. To obtain the results, the data gathered were analyzed using forecasting methods that can be of help in solving some uncertainties that surround the future. The greenhouse gas (GHG) emissions trends in Romania were analyzed both for linear and exponential function methods. The obtained results showed that the linear function analysis of total GHG emissions in Romania had a forecast accuracy higher than the exponential function method. From the analytical methods used we can draw the conclusion that the emissions are on a descending scale and choosing a proper method is important in analyzing data.
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21
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Woodhouse A, Jackson SL, Jamieson RA, Newton RJ, Sexton PF, Aze T. Adaptive ecological niche migration does not negate extinction susceptibility. Sci Rep 2021; 11:15411. [PMID: 34326356 PMCID: PMC8322071 DOI: 10.1038/s41598-021-94140-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2021] [Accepted: 06/29/2021] [Indexed: 11/25/2022] Open
Abstract
Extinction rates in the modern world are currently at their highest in 66 million years and are likely to increase with projections of future climate change. Our knowledge of modern-day extinction risk is largely limited to decadal-centennial terrestrial records, while data from the marine realm is typically applied to high-order (> 1 million year) timescales. At present, it is unclear whether fossil organisms with common ancestry and ecological niche exhibit consistent indicators of ecological stress prior to extinction. The marine microfossil record, specifically that of the planktonic foraminifera, allows for high-resolution analyses of large numbers of fossil individuals with incredibly well-established ecological and phylogenetic history. Here, analysis of the isochronous extinction of two members of the planktonic foraminiferal genus Dentoglobigerina shows disruptive selection differentially compounded by permanent ecological niche migration, "pre-extinction gigantism", and photosymbiont bleaching prior to extinction. Despite shared ecological and phylogenetic affinity, and timing of extinction, the marked discrepancies observed within the pre-extinction phenotypic responses are species-specific. These behaviours may provide insights into the nature of evolution and extinction in the open ocean and can potentially assist in the recognition and understanding of marine extinction risk in response to global climate change.
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Affiliation(s)
- A Woodhouse
- School of Earth and Environment, University of Leeds, Leeds, LS2 9JT, UK.
| | - S L Jackson
- School of Earth and Environment, University of Leeds, Leeds, LS2 9JT, UK
| | - R A Jamieson
- School of Earth and Environment, University of Leeds, Leeds, LS2 9JT, UK
| | - R J Newton
- School of Earth and Environment, University of Leeds, Leeds, LS2 9JT, UK
| | - P F Sexton
- School of Environment, Earth and Ecosystem Sciences, Open University, Walton Hall, Kents Hill, Milton Keynes, MK7 6AA, UK
| | - T Aze
- School of Earth and Environment, University of Leeds, Leeds, LS2 9JT, UK
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22
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Bopp L. "Birth" of the modern ocean twilight zone. Science 2021; 371:1099-1100. [PMID: 33707251 DOI: 10.1126/science.abg5994] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Affiliation(s)
- Laurent Bopp
- Laboratoire de Météorologie Dynamique/Institut Pierre Simon Laplace, CNRS, Ecole Normale Superieure/PSL University, Sorbonne Université, Ecole Polytechnique, Paris, France.
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