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Moustafa MAM, Mohamed WMA, Lau AC, Chatanga E, Qiu Y, Hayashi N, Naguib D, Sato K, Takano A, Mastuno K, Nonaka N, Taylor D, Kawabata H, Nakao R. Novel symbionts and potential human pathogens excavated from argasid tick microbiomes that are shaped by dual or single symbiosis. Comput Struct Biotechnol J 2022; 20:1979-1992. [PMID: 35521555 PMCID: PMC9062450 DOI: 10.1016/j.csbj.2022.04.020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2022] [Revised: 04/15/2022] [Accepted: 04/15/2022] [Indexed: 11/27/2022] Open
Abstract
Research on vector-associated microbiomes has been expanding due to increasing emergence of vector-borne pathogens and awareness of the importance of symbionts in the vector physiology. However, little is known about microbiomes of argasid (or soft-bodied) ticks due to limited access to specimens. We collected four argasid species (Argas japonicus, Carios vespertilionis, Ornithodoros capensis, and Ornithodoros sawaii) from the nests or burrows of their vertebrate hosts. One laboratory-reared argasid species (Ornithodoros moubata) was also included. Attempts were then made to isolate and characterize potential symbionts/pathogens using arthropod cell lines. Microbial community structure was distinct for each tick species. Coxiella was detected as the predominant symbiont in four tick species where dual symbiosis between Coxiella and Rickettsia or Coxiella and Francisella was observed in C. vespertilionis and O. moubata, respectively. Of note, A. japonicus lacked Coxiella and instead had Occidentia massiliensis and Thiotrichales as alternative symbionts. Our study found strong correlation between tick species and life stage. We successfully isolated Oc. massiliensis and characterized potential pathogens of genera Ehrlichia and Borrelia. The results suggest that there is no consistent trend of microbiomes in relation to tick life stage that fit all tick species and that the final interpretation should be related to the balance between environmental bacterial exposure and endosymbiont ecology. Nevertheless, our findings provide insights on the ecology of tick microbiomes and basis for future investigations on the capacity of argasid ticks to carry novel pathogens with public health importance.
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Huang HHH, Power RI, Mathews KO, Ma GC, Bosward KL, Šlapeta J. Cat fleas ( Ctenocephalides felis clade 'Sydney') are dominant fleas on dogs and cats in New South Wales, Australia: Presence of flea-borne Rickettsia felis, Bartonella spp. but absence of Coxiella burnetii DNA. CURRENT RESEARCH IN PARASITOLOGY & VECTOR-BORNE DISEASES 2022; 1:100045. [PMID: 35284882 PMCID: PMC8906117 DOI: 10.1016/j.crpvbd.2021.100045] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/05/2021] [Revised: 07/23/2021] [Accepted: 07/25/2021] [Indexed: 01/04/2023]
Abstract
The cat flea (Ctenocephalides felis) is the most common flea species parasitising both domestic cats and dogs globally. Fleas are known vectors of zoonotic pathogens such as vector-borne Rickettsia spp. and Bartonella spp. and could theoretically transmit Coxiella burnetii, the causative agent of Q fever. A total of 107 fleas were collected from 21 cats and 14 dogs in veterinary clinics, a feline rescue organisation and a grooming salon in New South Wales, Australia, to undergo PCR detection of Bartonella spp., Rickettsia spp. and C. burnetii DNA. Morphological identification confirmed that the cat flea (C. felis) is the most common flea in New South Wales, Australia, with only a single stick fast flea, Echidnophaga gallinacea recorded. The examined fleas (n = 35) at the cox1 locus revealed five closely related C. felis haplotypes (inter-haplotype distance < 0.5%). Multiplex TaqMan qPCR targeting the gltA (Rickettsia spp.) and ssrA (Bartonella spp.) genes was positive in 22.9% (95% CI: 11.8–39.3%) and 11.4% (95% CI: 3.9–26.6%) of samples, respectively. None of the DNA isolated from fleas was positive on TaqMan qPCRs targeting the C. burnetii IS1111, Com1 and htpAB genes. Co-infection of C. felis with Bartonella henselae and Bartonella clarridgeiae was demonstrated using gltA and ssrA Illumina next-generation amplicon sequencing. These findings reinforce the importance of flea control on domestic dogs and cats to effectively control the transmission of Rickettsia felis and Bartonella spp. The flea, however, is unlikely to be a vector of C. burnetii between companion animals and humans. The cat flea (Ctenocephalides felis) is the flea species on cats and dogs in New South Wales Australia. Absence of Coxiella burnetii DNA in flea extract, but presence of Rickettsia felis. Detection of Bartonella DNA using gltA and ssrA Illumina next-generation amplicon sequencing.
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Potential Role of Birds in the Epidemiology of Coxiella burnetii, Coxiella-like Agents and Hepatozoon spp. Pathogens 2022; 11:pathogens11030298. [PMID: 35335622 PMCID: PMC8954922 DOI: 10.3390/pathogens11030298] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2021] [Revised: 02/04/2022] [Accepted: 02/24/2022] [Indexed: 02/04/2023] Open
Abstract
Birds may be involved in the epidemiology of infectious and/or parasitic diseases which affect mammals, including humans. Q fever, caused by Coxiella burnetii, is an important zoonosis causing economic losses mainly due to pathologies induced in ruminants. Even though birds are known to be potential reservoirs of C. burnetii, their role in the epidemiological cycle of the pathogen is not completely verified. In recent years, new bacteria identified as Coxiella-like agents, have been detected in birds affected by different pathologies; the potential role of these bacteria as pathogens for mammals is not currently known. Hepatozoon spp. are haemoprotozoa, causing arthropod borne affections within several vertebrate classes. The infection of vertebrate host develops after ingestion of the arthropod final hosts containing oocysts; different tissues and blood cells are then colonized by other parasite stages, such as merozoites and gamonts. In avian hosts, there are several recognized Hepatozoon species; however, their life cycle and pathogenicity have not been fully elucidated. Referring to a carrier role by avian species and their ticks in the epidemiology of canine hepatozoonosis, the only clinically relevant affection caused by this parasite genus, they would act as carriers of infected ticks and, when Hepatozoon americanum is involved, as paratenic hosts, as well.
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Gomard Y, Flores O, Vittecoq M, Blanchon T, Toty C, Duron O, Mavingui P, Tortosa P, McCoy KD. Changes in Bacterial Diversity, Composition and Interactions During the Development of the Seabird Tick Ornithodoros maritimus (Argasidae). MICROBIAL ECOLOGY 2021; 81:770-783. [PMID: 33025063 DOI: 10.1007/s00248-020-01611-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/29/2019] [Accepted: 09/22/2020] [Indexed: 06/11/2023]
Abstract
Characterising within-host microbial interactions is essential to understand the drivers that shape these interactions and their consequences for host ecology and evolution. Here, we examined the bacterial microbiota hosted by the seabird soft tick Ornithodoros maritimus (Argasidae) in order to uncover bacterial interactions within ticks and how these interactions change over tick development. Bacterial communities were characterised through next-generation sequencing of the V3-V4 hypervariable region of the bacterial 16S ribosomal RNA gene. Bacterial co-occurrence and co-exclusion were determined by analysing networks generated from the metagenomic data obtained at each life stage. Overall, the microbiota of O. maritimus was dominated by four bacterial genera, namely Coxiella, Rickettsia, Brevibacterium and Arsenophonus, representing almost 60% of the reads. Bacterial diversity increased over tick development, and adult male ticks showed higher diversity than did adult female ticks. Bacterial networks showed that co-occurrence was more frequent than co-exclusion and highlighted substantial shifts across tick life stages; interaction networks changed from one stage to the next with a steady increase in the number of interactions through development. Although many bacterial interactions appeared unstable across life stages, some were maintained throughout development and were found in both sexes, such as Coxiella and Arsenophonus. Our data support the existence of a few stable interactions in O. maritimus ticks, on top of which bacterial taxa accumulate from hosts and/or the environment during development. We propose that stable associations delineate core microbial interactions, which are likely to be responsible for key biological functions.
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Affiliation(s)
- Yann Gomard
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), INSERM 1187, CNRS 9192, IRD 249, Plateforme Technologique CYROI, Sainte-Clotilde, La Réunion, France.
| | - Olivier Flores
- Université de La Réunion, UMR PVBMT (Peuplements Végétaux et Bioagresseurs en Milieu Tropical), CIRAD, Saint-Pierre, La Réunion, France
| | - Marion Vittecoq
- Tour de Valat, Research Institute for the Conservation of Mediterranean Wetlands, Arles, France
| | - Thomas Blanchon
- Tour de Valat, Research Institute for the Conservation of Mediterranean Wetlands, Arles, France
| | - Céline Toty
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), INSERM 1187, CNRS 9192, IRD 249, Plateforme Technologique CYROI, Sainte-Clotilde, La Réunion, France
- MIVEGEC, University of Montpellier CNRS IRD, Centre IRD, Montpellier, France
| | - Olivier Duron
- MIVEGEC, University of Montpellier CNRS IRD, Centre IRD, Montpellier, France
- Centre for Research on the Ecology and Evolution of Diseases (CREES), Montpellier, France
| | - Patrick Mavingui
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), INSERM 1187, CNRS 9192, IRD 249, Plateforme Technologique CYROI, Sainte-Clotilde, La Réunion, France
| | - Pablo Tortosa
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), INSERM 1187, CNRS 9192, IRD 249, Plateforme Technologique CYROI, Sainte-Clotilde, La Réunion, France
| | - Karen D McCoy
- MIVEGEC, University of Montpellier CNRS IRD, Centre IRD, Montpellier, France
- Centre for Research on the Ecology and Evolution of Diseases (CREES), Montpellier, France
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Coimbra-Dores MJ, Jaarsma RI, Carmo AO, Maia-Silva M, Fonville M, da Costa DFF, Brandão RML, Azevedo F, Casero M, Oliveira AC, Afonso SMDS, Sprong H, Rosa F, Dias D. Mitochondrial sequences of Rhipicephalus and Coxiella endosymbiont reveal evidence of lineages co-cladogenesis. FEMS Microbiol Ecol 2020; 96:5824628. [PMID: 32329790 DOI: 10.1093/femsec/fiaa072] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2019] [Accepted: 04/21/2020] [Indexed: 11/13/2022] Open
Abstract
Rhipicephalus ticks are competent vectors of several pathogens, such as Spotted Fever Group Rickettsiae (SFGR) and many Babesia species. Within this genus, different R. sanguineus s.l. lineages show an unequal vector competence and resistance regarding some pathogenic strains. Current literature supports that tick endosymbionts may play an essential role in the transmission ability of a vector. Indeed, the microbial community of Rhipicephalus seems to be dominated by Coxiella-like endosymbionts (CLE). Still, their co-evolutionary associations with the complicated phylogeny of Rhipicephalus lineages and their transmissible pathogens remain unclear. We performed a phylogenetic congruence analysis to address whether divergent R. sanguineus s.l. lineages had a different symbiont composition. For that, we applied a PCR based approach to screen part of the microbial community present in 279 Rhipicephalus ticks from the Iberian Peninsula and Africa. Our analyses detected several qPCR-positive signals for both SFGR and Babesia species, of which we suggest R. sanguineus-tropical lineage as a natural vector of Babesia vogeli and R. sanguineus-temperate lineage of SFGR. The acquisition of 190 CLE sequences allowed to evaluate co-phylogenetic associations between the tick and the symbiont. With this data, we observed a strong but incomplete co-cladogenesis between CLE strains and their Rhipicephalus tick lineages hosts.
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Affiliation(s)
- Maria João Coimbra-Dores
- Centre for Environmental and Marine Studies (CESAM), Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal
| | - Ryanne Isolde Jaarsma
- Centre for Infectious Disease Control (CIb), National Institute for Public Health and the Environment (RIVM), 3720 BA Bilthoven, The Netherlands
| | - Anderson Oliveira Carmo
- Centre for Environmental and Marine Studies (CESAM), Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal
| | - Mariana Maia-Silva
- Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal
| | - Manoj Fonville
- Centre for Infectious Disease Control (CIb), National Institute for Public Health and the Environment (RIVM), 3720 BA Bilthoven, The Netherlands
| | | | - Ricardo Manuel Lemos Brandão
- Wild Animal Ecology, Rehabilitation and Surveillance Center (CERVAS), Serra da Estrela Natural Park, 6290-909 Gouveia, Portugal
| | - Fábia Azevedo
- Wildlife Rehabilitation and Investigation Center (RIAS), Ria Formosa Natural Park, 8700-225 Olhão, Portugal
| | - María Casero
- Wildlife Rehabilitation and Investigation Center (RIAS), Ria Formosa Natural Park, 8700-225 Olhão, Portugal
| | - Ana Cristina Oliveira
- Casa dos Animais Veterinary Clinic, Travessa Quinta da Rosa Linda, Morro Bento, Luanda, Angola
| | | | - Hein Sprong
- Centre for Infectious Disease Control (CIb), National Institute for Public Health and the Environment (RIVM), 3720 BA Bilthoven, The Netherlands
| | - Fernanda Rosa
- Instituto Superior de Agronomia (ISA), Universidade de Lisboa, Tapada da Ajuda, 1349-017 Lisboa, Portugal.,Centre for Environmental and Marine Studies (CESAM), Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal
| | - Deodália Dias
- Centre for Environmental and Marine Studies (CESAM), Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, 1749-016 Lisboa, Portugal
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Segura JA, Isaza JP, Botero LE, Alzate JF, Gutiérrez LA. Assessment of bacterial diversity of Rhipicephalus microplus ticks from two livestock agroecosystems in Antioquia, Colombia. PLoS One 2020; 15:e0234005. [PMID: 32609768 PMCID: PMC7329104 DOI: 10.1371/journal.pone.0234005] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2019] [Accepted: 05/15/2020] [Indexed: 12/16/2022] Open
Abstract
Rhipicephalus microplus is recognized as a tick species highly prevalent in cattle, with a wide pantropical distribution that seems to continue spreading geographically. However, its role as a biological vector has been scarcely studied in the livestock context. In this study, a 16S rRNA next-generation sequencing analysis was used to determine bacterial diversity in salivary glands and gut of R. microplus from two contrasting livestock agroecosystems in Antioquia, Colombia. Both the culture-independent approach (CI) and the culture-dependent (CD) approach were complementarily adopted in this study. A total of 341 unique OTUs were assigned, the richness showed to be higher in the Northern than in the Middle Magdalena region, and a high diversity was found at the phylum and genus levels in the samples obtained. With the CI approach, Proteobacteria, Bacteroidetes, Firmicutes, and Actinobacteria were the most common phylum of bacteria regardless of the organ, or geographic origin of the specimens analyzed. While the relative abundance of bacteria at a phylum level with the CD approach varied between analyzed samples, the data obtained suggest that a high diversity of species of bacteria occurs in R. microplus from both livestock agroecosystems. Bacterial genera such as Anaplasma, Coxiella, and Ehrlichia, recognized for their implications in tick-borne diseases, were also detected, together with endosymbionts such as Lysinibacillus, previously reported as a potential tool for biological control. This information is useful to deepen the knowledge about microbial diversity regarding the relations between endosymbionts and pathogens and could facilitate the future development of epidemiological surveillance in livestock systems.
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Affiliation(s)
- Juan A. Segura
- Grupo Biología de Sistemas, Escuela de Ciencias de la Salud, Facultad de Medicina, Universidad Pontificia Bolivariana, Medellín, Antioquia, Colombia
| | - Juan P. Isaza
- Grupo Biología de Sistemas, Escuela de Ciencias de la Salud, Facultad de Medicina, Universidad Pontificia Bolivariana, Medellín, Antioquia, Colombia
| | - Luz E. Botero
- Grupo Biología de Sistemas, Escuela de Ciencias de la Salud, Facultad de Medicina, Universidad Pontificia Bolivariana, Medellín, Antioquia, Colombia
| | - Juan F. Alzate
- Departamento de Microbiología y Parasitología, Facultad de Medicina, Centro Nacional de Secuenciación Genómica - CNSG, Sede de Investigación Universitaria - SIU, Universidad de Antioquia, Medellín, Antioquia, Colombia
| | - Lina A. Gutiérrez
- Grupo Biología de Sistemas, Escuela de Ciencias de la Salud, Facultad de Medicina, Universidad Pontificia Bolivariana, Medellín, Antioquia, Colombia
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Phillips RA, Kraev I, Lange S. Protein Deimination and Extracellular Vesicle Profiles in Antarctic Seabirds. BIOLOGY 2020; 9:E15. [PMID: 31936359 PMCID: PMC7168935 DOI: 10.3390/biology9010015] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/26/2019] [Revised: 12/19/2019] [Accepted: 01/07/2020] [Indexed: 02/06/2023]
Abstract
Pelagic seabirds are amongst the most threatened of all avian groups. They face a range of immunological challenges which seem destined to increase due to environmental changes in their breeding and foraging habitats, affecting prey resources and exposure to pollution and pathogens. Therefore, the identification of biomarkers for the assessment of their health status is of considerable importance. Peptidylarginine deiminases (PADs) post-translationally convert arginine into citrulline in target proteins in an irreversible manner. PAD-mediated deimination can cause structural and functional changes in target proteins, allowing for protein moonlighting in physiological and pathophysiological processes. PADs furthermore contribute to the release of extracellular vesicles (EVs), which play important roles in cellular communication. In the present study, post-translationally deiminated protein and EV profiles of plasma were assessed in eight seabird species from the Antarctic, representing two avian orders: Procellariiformes (albatrosses and petrels) and Charadriiformes (waders, auks, gulls and skuas). We report some differences between the species assessed, with the narrowest EV profiles of 50-200 nm in the northern giant petrel Macronectes halli, and the highest abundance of larger 250-500 nm EVs in the brown skua Stercorarius antarcticus. The seabird EVs were positive for phylogenetically conserved EV markers and showed characteristic EV morphology. Post-translational deimination was identified in a range of key plasma proteins critical for immune response and metabolic pathways in three of the bird species under study; the wandering albatross Diomedea exulans, south polar skua Stercorarius maccormicki and northern giant petrel. Some differences in Gene Ontology (GO) biological and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathways for deiminated proteins were observed between these three species. This indicates that target proteins for deimination may differ, potentially contributing to a range of physiological functions relating to metabolism and immune response, as well as to key defence mechanisms. PAD protein homologues were identified in the seabird plasma by Western blotting via cross-reaction with human PAD antibodies, at an expected 75 kDa size. This is the first study to profile EVs and to identify deiminated proteins as putative novel plasma biomarkers in Antarctic seabirds. These biomarkers may be further refined to become useful indicators of physiological and immunological status in seabirds-many of which are globally threatened.
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Affiliation(s)
- Richard A. Phillips
- British Antarctic Survey, Natural Environment Research Council, Cambridge CB3 0ET, UK;
| | - Igor Kraev
- Electron Microscopy Suite, Faculty of Science, Technology, Engineering and Mathematics, Open University, Milton Keynes MK7 6AA, UK;
| | - Sigrun Lange
- Tissue Architecture and Regeneration Research Group, School of Life Sciences, University of Westminster, London W1W 6UW, UK
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Khan JS, Provencher JF, Forbes MR, Mallory ML, Lebarbenchon C, McCoy KD. Parasites of seabirds: A survey of effects and ecological implications. ADVANCES IN MARINE BIOLOGY 2019; 82:1-50. [PMID: 31229148 PMCID: PMC7172769 DOI: 10.1016/bs.amb.2019.02.001] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/01/2023]
Abstract
Parasites are ubiquitous in the environment, and can cause negative effects in their host species. Importantly, seabirds can be long-lived and cross multiple continents within a single annual cycle, thus their exposure to parasites may be greater than other taxa. With changing climatic conditions expected to influence parasite distribution and abundance, understanding current level of infection, transmission pathways and population-level impacts are integral aspects for predicting ecosystem changes, and how climate change will affect seabird species. In particular, a range of micro- and macro-parasites can affect seabird species, including ticks, mites, helminths, viruses and bacteria in gulls, terns, skimmers, skuas, auks and selected phalaropes (Charadriiformes), tropicbirds (Phaethontiformes), penguins (Sphenisciformes), tubenoses (Procellariiformes), cormorants, frigatebirds, boobies, gannets (Suliformes), and pelicans (Pelecaniformes) and marine seaducks and loons (Anseriformes and Gaviiformes). We found that the seabird orders of Charadriiformes and Procellariiformes were most represented in the parasite-seabird literature. While negative effects were reported in seabirds associated with all the parasite groups, most effects have been studied in adults with less information known about how parasites may affect chicks and fledglings. We found studies most often reported on negative effects in seabird hosts during the breeding season, although this is also the time when most seabird research occurs. Many studies report that external factors such as condition of the host, pollution, and environmental conditions can influence the effects of parasites, thus cumulative effects likely play a large role in how parasites influence seabirds at both the individual and population level. With an increased understanding of parasite-host dynamics it is clear that major environmental changes, often those associated with human activities, can directly or indirectly affect the distribution, abundance, or virulence of parasites and pathogens.
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Affiliation(s)
- Junaid S Khan
- Canadian Wildlife Service, Environment and Climate Change Canada, Gatineau, QC, Canada
| | - Jennifer F Provencher
- Canadian Wildlife Service, Environment and Climate Change Canada, Gatineau, QC, Canada.
| | - Mark R Forbes
- Department of Biology, Carleton University, Ottawa, ON, Canada
| | - Mark L Mallory
- Department of Biology, Acadia University, Wolfville, NS, Canada
| | - Camille Lebarbenchon
- Université de La Réunion, UMR Processus Infectieux en Milieu Insulaire Tropical, INSERM 1187, CNRS 9192, IRD 249, GIP CYROI, Saint Denis, La Réunion, France
| | - Karen D McCoy
- MIVEGEC, UMR 5290 CNRS-IRD-University of Montpellier, Centre IRD, Montpellier, France
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9
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Jaeger A, Lebarbenchon C, Bourret V, Bastien M, Lagadec E, Thiebot JB, Boulinier T, Delord K, Barbraud C, Marteau C, Dellagi K, Tortosa P, Weimerskirch H. Avian cholera outbreaks threaten seabird species on Amsterdam Island. PLoS One 2018; 13:e0197291. [PMID: 29847561 PMCID: PMC5976148 DOI: 10.1371/journal.pone.0197291] [Citation(s) in RCA: 31] [Impact Index Per Article: 5.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/07/2017] [Accepted: 04/29/2018] [Indexed: 11/19/2022] Open
Abstract
Infectious diseases may be particularly critical for the conservation of endangered species. A striking example is the recurrent outbreaks that have been occurring in seabirds on Amsterdam Island for the past 30 years, threatening populations of three Endangered seabird species and of the endemic, Critically Endangered Amsterdam albatross Diomedea amsterdamensis. The bacteria Pasteurella multocida (avian cholera causative agent), and to a lesser extent Erysipelothrix rhusiopathiae (erysipelas causative agent), were both suspected to be responsible for these epidemics. Despite this critical situation, demographic trends were not available for these threatened populations, and the occurrence and characterization of potential causative agents of epizootics remain poorly known. The aims of the current study were to (i) provide an update of population trends for four threatened seabird species monitored on Amsterdam Island, (ii) assess the occurrence of P. multocida, and E. rhusiopathiae in live birds from five species, (iii) search for other infectious agents in these samples and, (iv) isolate and genotype the causative agent(s) of epizooties from dead birds. Our study shows that the demographic situation has worsened substantially in three seabird species during the past decade, with extremely low reproductive success and declining populations for Indian yellow-nosed albatrosses Thalassarche carteri, sooty albatrosses Phoebetria fusca, and northern rockhopper penguins Eudyptes moseleyi. Pasteurella multocida or E. rhusiopathiae were detected by PCR in live birds of all five investigated species, while results were negative for eight additional infectious agents. A single strain of P. multocida was repeatedly cultured from dead birds, while no E. rhusiopathiae could be isolated. These results highlight the significance of P. multocida in this particular eco-epidemiological system as the main agent responsible for epizootics. The study stresses the urgent need to implement mitigation measures to alter the course of avian cholera outbreaks threatening the persistence of seabird populations on Amsterdam Island.
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Affiliation(s)
- Audrey Jaeger
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), CNRS 9192, INSERM 1187, IRD 249, GIP CYROI, Saint Denis, La Réunion, France
- Université de la Réunion, UMR ENTROPIE, UR, IRD, CNRS, Saint Denis, La Réunion, France
- Centre de Recherche et de Veille sur les maladies émergentes dans l’Océan Indien, GIP CYROI, Sainte Clotilde, La Réunion, France
| | - Camille Lebarbenchon
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), CNRS 9192, INSERM 1187, IRD 249, GIP CYROI, Saint Denis, La Réunion, France
- Centre de Recherche et de Veille sur les maladies émergentes dans l’Océan Indien, GIP CYROI, Sainte Clotilde, La Réunion, France
| | - Vincent Bourret
- Centre d’Ecologie Fonctionnelle et Evolutive, CNRS-Université Montpellier UMR 5175, Montpellier, France
| | - Matthieu Bastien
- Centre de Recherche et de Veille sur les maladies émergentes dans l’Océan Indien, GIP CYROI, Sainte Clotilde, La Réunion, France
- Réserve Naturelle Nationale des Terres Australes Françaises, Terres Australes et Antarctiques Françaises, rue Gabriel Dejean, Saint Pierre, La Réunion, France
| | - Erwan Lagadec
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), CNRS 9192, INSERM 1187, IRD 249, GIP CYROI, Saint Denis, La Réunion, France
- Centre de Recherche et de Veille sur les maladies émergentes dans l’Océan Indien, GIP CYROI, Sainte Clotilde, La Réunion, France
- Réserve Naturelle Nationale des Terres Australes Françaises, Terres Australes et Antarctiques Françaises, rue Gabriel Dejean, Saint Pierre, La Réunion, France
| | - Jean-Baptiste Thiebot
- Réserve Naturelle Nationale des Terres Australes Françaises, Terres Australes et Antarctiques Françaises, rue Gabriel Dejean, Saint Pierre, La Réunion, France
- Centre d’Etudes Biologiques de Chizé, UMR 7372CNRS – Université de La Rochelle, Villiers en Bois, France
| | - Thierry Boulinier
- Centre d’Ecologie Fonctionnelle et Evolutive, CNRS-Université Montpellier UMR 5175, Montpellier, France
| | - Karine Delord
- Centre d’Etudes Biologiques de Chizé, UMR 7372CNRS – Université de La Rochelle, Villiers en Bois, France
| | - Christophe Barbraud
- Centre d’Etudes Biologiques de Chizé, UMR 7372CNRS – Université de La Rochelle, Villiers en Bois, France
| | - Cédric Marteau
- Réserve Naturelle Nationale des Terres Australes Françaises, Terres Australes et Antarctiques Françaises, rue Gabriel Dejean, Saint Pierre, La Réunion, France
| | - Koussay Dellagi
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), CNRS 9192, INSERM 1187, IRD 249, GIP CYROI, Saint Denis, La Réunion, France
- Centre de Recherche et de Veille sur les maladies émergentes dans l’Océan Indien, GIP CYROI, Sainte Clotilde, La Réunion, France
| | - Pablo Tortosa
- Université de La Réunion, UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), CNRS 9192, INSERM 1187, IRD 249, GIP CYROI, Saint Denis, La Réunion, France
- Centre de Recherche et de Veille sur les maladies émergentes dans l’Océan Indien, GIP CYROI, Sainte Clotilde, La Réunion, France
| | - Henri Weimerskirch
- Centre d’Etudes Biologiques de Chizé, UMR 7372CNRS – Université de La Rochelle, Villiers en Bois, France
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Inventory and update on argasid ticks and associated pathogens in Algeria. New Microbes New Infect 2018; 23:110-114. [PMID: 29692914 PMCID: PMC5913355 DOI: 10.1016/j.nmni.2018.02.009] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2018] [Revised: 02/10/2018] [Accepted: 02/14/2018] [Indexed: 11/03/2022] Open
Abstract
Argasid ticks include vectors of relapsing fevers caused by Borrelia spp. in humans, and they can transmit arboviruses and other bacterial pathogens. Knowledge about soft ticks (Ixodida: Argasidae) in Algeria is incomplete, and distribution data need to be updated. Here we report a series of entomologic investigations that we conducted in five different areas in Algeria between 2012 and 2015. Ticks were identified by entomologic keys and molecular tools (16S rRNA gene). Six distinct species belonging to two genera were identified, including Ornithodoros capensis s.s., Ornithodoros rupestris, Ornithodoros occidentalis, Ornithodoros erraticus, Ornithodoros sonrai and Argas persicus. The present study highlights the distribution of soft ticks, the establishment of an update inventory with nine species and associated pathogens detected in argasid ticks in Algeria.
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11
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Wanelik KM, Burthe SJ, Harris MP, Nunn MA, Godfray HCJ, Sheldon BC, McLean AR, Wanless S. Investigating the effects of age-related spatial structuring on the transmission of a tick-borne virus in a colonially breeding host. Ecol Evol 2017; 7:10930-10940. [PMID: 29299270 PMCID: PMC5743484 DOI: 10.1002/ece3.3612] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2017] [Revised: 09/20/2017] [Accepted: 10/16/2017] [Indexed: 11/11/2022] Open
Abstract
Higher pathogen and parasite transmission is considered a universal cost of colonial breeding due to the physical proximity of colony members. However, this has rarely been tested in natural colonies, which are structured entities, whose members interact with a subset of individuals and differ in their infection histories. We use a population of common guillemots, Uria aalge, infected by a tick-borne virus, Great Island virus, to explore how age-related spatial structuring can influence the infection costs borne by different members of a breeding colony. Previous work has shown that the per-susceptible risk of infection (force of infection) is different for prebreeding (immature) and breeding (adult) guillemots which occupy different areas of the colony. We developed a mathematical model which showed that this difference in infection risk can only be maintained if mixing between these age groups is low. To estimate mixing between age groups, we recorded the movements of 63 individually recognizable, prebreeding guillemots in four different parts of a major colony in the North Sea during the breeding season. Prebreeding guillemots infrequently entered breeding areas (in only 26% of watches), though with marked differences in frequency of entry among individuals and more entries toward the end of the breeding season. Once entered, the proportion of time spent in breeding areas by prebreeding guillemots also varied between different parts of the colony. Our data and model predictions indicate low levels of age-group mixing, limiting exposure of breeding guillemots to infection. However, they also suggest that prebreeding guillemots have the potential to play an important role in driving infection dynamics. This highlights the sensitivity of breeding colonies to changes in the behavior of their members-a subject of particular importance in the context of global environmental change.
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Affiliation(s)
- Klara M. Wanelik
- Department of ZoologyUniversity of OxfordOxfordUK
- Centre for Ecology & HydrologyWallingfordUK
- Institute of Integrative BiologyUniversity of LiverpoolLiverpoolUK
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12
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Mori M, Mertens K, Cutler SJ, Santos AS. Critical Aspects for Detection of Coxiella burnetii. Vector Borne Zoonotic Dis 2017; 17:33-41. [PMID: 28055578 DOI: 10.1089/vbz.2016.1958] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022] Open
Abstract
Coxiella burnetii is a globally distributed zoonotic γ-proteobacterium with an obligatory intracellular lifestyle. It is the causative agent of Q fever in humans and of coxiellosis among ruminants, although the agent is also detected in ticks, birds, and various other mammalian species. Requirements for intracellular multiplication together with the necessity for biosafety level 3 facilities restrict the cultivation of C. burnetii to specialized laboratories. Development of a novel medium formulation enabling axenic growth of C. burnetii has facilitated fundamental genetic studies. This review provides critical insights into direct diagnostic methods currently available for C. burnetii. It encompasses molecular detection methods, isolation, and propagation of the bacteria and its genetic characterization. Differentiation of C. burnetii from Coxiella-like organisms is an essential diagnostic prerequisite, particularly when handling and analyzing ticks.
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Affiliation(s)
- Marcella Mori
- 1 Bacterial Zoonoses of Livestock, Operational Directorate Bacterial Diseases, Veterinary and Agrochemical Research Centre, CODA-CERVA , Brussels, Belgium .,2 Belgian Reference Centre for Coxiella burnetii and Bartonella , Brussels, Belgium
| | - Katja Mertens
- 3 Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Institute for Bacterial Infections and Zoonoses , Jena, Germany
| | | | - Ana Sofia Santos
- 5 Centre for Vector and Infectious Diseases Research, National Institute of Health Doutor Ricardo Jorge , Águas de Moura, Portugal
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13
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Wang X, Du H, Xu Y. Source tracking of prokaryotic communities in fermented grain of Chinese strong-flavor liquor. Int J Food Microbiol 2017; 244:27-35. [DOI: 10.1016/j.ijfoodmicro.2016.12.018] [Citation(s) in RCA: 91] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2016] [Revised: 12/22/2016] [Accepted: 12/26/2016] [Indexed: 10/20/2022]
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14
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Tessier C, Parama Atiana L, Lagadec E, Le Minter G, Denis M, Cardinale E. Wild fauna as a carrier of Salmonella in Reunion Island: Impact on pig farms. Acta Trop 2016; 158:6-12. [PMID: 26829358 DOI: 10.1016/j.actatropica.2016.01.027] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2015] [Revised: 01/24/2016] [Accepted: 01/26/2016] [Indexed: 12/19/2022]
Abstract
Salmonellosis is an economic burden to the livestock industry in Reunion Island. In this study, we wanted to improve our understanding of Salmonella epidemiology by studying the wild fauna of Reunion Island. We assessed Salmonella diversity in small non-flying mammals, birds and cockroaches in order to evaluate their potential role in the epidemiology of Salmonella. A total of 268 samples were collected from cockroaches, small mammals and birds. The bacteriological analyses revealed that 11.7% of non-flying mammals and 25% of cockroaches tested were Salmonella infected; two wild bird species were also detected positive. The 128 Salmonella isolates were distributed in fifteen serotypes and the most predominant were S. 4,[5],12:i:- (21.9% of positive samples) followed by S. Enteritidis (15.6%), S. Typhimurium (15.6%), S. Infantis (12.5%) and S. Weltevreden (12.5%). A total of 27 XbaI profiles were identified using pulsed-field gel electrophoresis. Comparison of these Salmonella strains with our collection of Salmonella isolated from pigs and pig farm environments at the same period revealed 14 strains in common between wild fauna and pigs, especially for cockroaches. Our results suggest that wild fauna of Reunion Island could be infected by strains of Salmonella also isolated from pigs or pig environment. They may play a role in both persistence and spreading of Salmonella and therefore, could be a source of infection in pig farms. Pest control against cockroaches could be a helpful tool in the reduction of Salmonella infection of pigs, limiting contacts between wild fauna and both pigs and pig environment. Special attention should be paid to S. 4,[5],12:i:- since it was predominant in Reunion Island's wild fauna and pigs and was the third most frequently reported serotype in human salmonellosis in Europe.
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McCoy KD, Dietrich M, Jaeger A, Wilkinson DA, Bastien M, Lagadec E, Boulinier T, Pascalis H, Tortosa P, Le Corre M, Dellagi K, Lebarbenchon C. The role of seabirds of the Iles Eparses as reservoirs and disseminators of parasites and pathogens. ACTA OECOLOGICA (MONTROUGE, FRANCE) 2016; 72:98-109. [PMID: 32288503 PMCID: PMC7128210 DOI: 10.1016/j.actao.2015.12.013] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/09/2015] [Revised: 12/30/2015] [Accepted: 12/30/2015] [Indexed: 11/30/2022]
Abstract
The role of birds as reservoirs and disseminators of parasites and pathogens has received much attention over the past several years due to their high vagility. Seabirds are particularly interesting hosts in this respect. In addition to incredible long-distance movements during migration, foraging and prospecting, these birds are long-lived, site faithful and breed in dense aggregations in specific colony locations. These different characteristics can favor both the local maintenance and large-scale dissemination of parasites and pathogens. The Iles Eparses provide breeding and feeding grounds for more than 3 million breeding pairs of seabirds including at least 13 species. Breeding colonies on these islands are relatively undisturbed by human activities and represent natural metapopulations in which seabird population dynamics, movement and dispersal can be studied in relation to that of circulating parasites and pathogens. In this review, we summarize previous knowledge and recently-acquired data on the parasites and pathogens found in association with seabirds of the Iles Eparses. These studies have revealed the presence of a rich diversity of infectious agents (viruses, bacteria and parasites) carried by the birds and/or their local ectoparasites (ticks and louse flies). Many of these agents are widespread and found in other ecosystems confirming a role for seabirds in their large scale dissemination and maintenance. The heterogeneous distribution of parasites and infectious agents among islands and seabird species suggests that relatively independent metacommunities of interacting species may exist within the western Indian Ocean. In this context, we discuss how the patterns and determinants of seabird movements may alter parasite and pathogen circulation. We conclude by outlining key aspects for future research given the baseline data now available and current concerns in eco-epidemiology and biodiversity conservation.
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Affiliation(s)
- Karen D. McCoy
- MIVEGEC (Maladies Infectieuses et Vecteurs: Evolution, Génétique, Ecologie, Contrôle) UMR 5290 CNRS-IRD-Université de Montpellier, Centre IRD, 34393 Montpellier, France
| | - Muriel Dietrich
- CRVOI (Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien), 97490 Sainte Clotilde, Reunion Island, France
| | - Audrey Jaeger
- CRVOI (Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien), 97490 Sainte Clotilde, Reunion Island, France
- UMR ENTROPIE, Université de la Réunion-IRD-CNRS, CS92003, 97744 Saint Denis, Reunion Island, France
| | - David A. Wilkinson
- CRVOI (Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien), 97490 Sainte Clotilde, Reunion Island, France
- UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), Université de La Réunion, INSERM 1187, CNRS 9192, IRD 249, 97490 Sainte Clotilde, Reunion Island, France
| | - Matthieu Bastien
- CRVOI (Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien), 97490 Sainte Clotilde, Reunion Island, France
- UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), Université de La Réunion, INSERM 1187, CNRS 9192, IRD 249, 97490 Sainte Clotilde, Reunion Island, France
| | - Erwan Lagadec
- CRVOI (Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien), 97490 Sainte Clotilde, Reunion Island, France
- UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), Université de La Réunion, INSERM 1187, CNRS 9192, IRD 249, 97490 Sainte Clotilde, Reunion Island, France
| | - Thierry Boulinier
- Centre d'Ecologie Fonctionnelle et Evolutive, CNRS-Université de Montpellier UMR 5175, 34293 Montpellier, France
| | - Hervé Pascalis
- CRVOI (Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien), 97490 Sainte Clotilde, Reunion Island, France
- UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), Université de La Réunion, INSERM 1187, CNRS 9192, IRD 249, 97490 Sainte Clotilde, Reunion Island, France
| | - Pablo Tortosa
- CRVOI (Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien), 97490 Sainte Clotilde, Reunion Island, France
- UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), Université de La Réunion, INSERM 1187, CNRS 9192, IRD 249, 97490 Sainte Clotilde, Reunion Island, France
| | - Matthieu Le Corre
- UMR ENTROPIE, Université de la Réunion-IRD-CNRS, CS92003, 97744 Saint Denis, Reunion Island, France
| | - Koussay Dellagi
- CRVOI (Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien), 97490 Sainte Clotilde, Reunion Island, France
- UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), Université de La Réunion, INSERM 1187, CNRS 9192, IRD 249, 97490 Sainte Clotilde, Reunion Island, France
| | - Camille Lebarbenchon
- CRVOI (Centre de Recherche et de Veille sur les maladies émergentes dans l'Océan Indien), 97490 Sainte Clotilde, Reunion Island, France
- UMR PIMIT (Processus Infectieux en Milieu Insulaire Tropical), Université de La Réunion, INSERM 1187, CNRS 9192, IRD 249, 97490 Sainte Clotilde, Reunion Island, France
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16
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The Bacteriome of Bat Flies (Nycteribiidae) from the Malagasy Region: a Community Shaped by Host Ecology, Bacterial Transmission Mode, and Host-Vector Specificity. Appl Environ Microbiol 2016; 82:1778-88. [PMID: 26746715 DOI: 10.1128/aem.03505-15] [Citation(s) in RCA: 51] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/29/2015] [Accepted: 12/23/2015] [Indexed: 12/31/2022] Open
Abstract
The Nycteribiidae are obligate blood-sucking Diptera (Hippoboscoidea) flies that parasitize bats. Depending on species, these wingless flies exhibit either high specialism or generalism toward their hosts, which may in turn have important consequences in terms of their associated microbial community structure. Bats have been hypothesized to be reservoirs of numerous infectious agents, some of which have recently emerged in human populations. Thus, bat flies may be important in the epidemiology and transmission of some of these bat-borne infectious diseases, acting either directly as arthropod vectors or indirectly by shaping pathogen communities among bat populations. In addition, bat flies commonly have associations with heritable bacterial endosymbionts that inhabit insect cells and depend on maternal transmission through egg cytoplasm to ensure their transmission. Some of these heritable bacteria are likely obligate mutualists required to support bat fly development, but others are facultative symbionts with unknown effects. Here, we present bacterial community profiles that were obtained from seven bat fly species, representing five genera, parasitizing bats from the Malagasy region. The observed bacterial diversity includes Rickettsia, Wolbachia, and several Arsenophonus-like organisms, as well as other members of the Enterobacteriales and a widespread association of Bartonella bacteria from bat flies of all five genera. Using the well-described host specificity of these flies and data on community structure from selected bacterial taxa with either vertical or horizontal transmission, we show that host/vector specificity and transmission mode are important drivers of bacterial community structure.
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17
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Vaumourin E, Vourc'h G, Gasqui P, Vayssier-Taussat M. The importance of multiparasitism: examining the consequences of co-infections for human and animal health. Parasit Vectors 2015; 8:545. [PMID: 26482351 PMCID: PMC4617890 DOI: 10.1186/s13071-015-1167-9] [Citation(s) in RCA: 111] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2015] [Accepted: 10/14/2015] [Indexed: 11/23/2022] Open
Abstract
Most parasites co-occur with other parasites, although the importance of such multiparasitism has only recently been recognised. Co-infections may result when hosts are independently infected by different parasites at the same time or when interactions among parasite species facilitate co-occurrence. Such interactions can have important repercussions on human or animal health because they can alter host susceptibility, infection duration, transmission risks, and clinical symptoms. These interactions may be synergistic or antagonistic and thus produce diverse effects in infected humans and animals. Interactions among parasites strongly influence parasite dynamics and therefore play a major role in structuring parasite populations (both within and among hosts) as well as host populations. However, several methodological challenges remain when it comes to detecting parasite interactions. The goal of this review is to summarise current knowledge on the causes and consequences of multiparasitism and to discuss the different methods and tools that researchers have developed to study the factors that lead to multiparasitism. It also identifies new research directions to pursue.
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Affiliation(s)
- Elise Vaumourin
- UR346 Animal Epidemiology Research Unit, INRA, Saint Genès Champanelle, France. .,USC BIPAR, INRA-ANSES-ENVA, Maisons-Alfort, France.
| | - Gwenaël Vourc'h
- UR346 Animal Epidemiology Research Unit, INRA, Saint Genès Champanelle, France.
| | - Patrick Gasqui
- UR346 Animal Epidemiology Research Unit, INRA, Saint Genès Champanelle, France.
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18
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Al-Deeb MA, Frangoulidis D, Walter MC, Kömpf D, Fischer SF, Petney T, Muzaffar SB. Coxiella-like endosymbiont in argasid ticks (Ornithodoros muesebecki) from a Socotra Cormorant colony in Umm Al Quwain, United Arab Emirates. Ticks Tick Borne Dis 2015; 7:166-171. [PMID: 26515059 DOI: 10.1016/j.ttbdis.2015.10.012] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/02/2015] [Revised: 09/27/2015] [Accepted: 10/15/2015] [Indexed: 02/07/2023]
Abstract
Coxiella burnetii is a pathogen causing Q fever in domestic animals and humans. Seabirds have been implicated as possible reservoirs of this bacterium in the Arabian Gulf and in the Western Indian Ocean. Recently, Coxiella species closely related to C. burnetii was detected from ticks collected from oil rigs used as roosting areas by Socotra Cormorants (Phalacrocorax nigrogularis) in the western Arabian Gulf. We collected ticks from the largest breeding colony of Socotra Cormorants in the United Arab Emirates on the eastern extreme of the species' breeding range to determine the prevalence of C. burnetii and evaluate its role as a wild reservoir. All ticks were identified as Ornithodoros muesebecki and genomic DNA was extracted from larval and nymph/adult tick pools. Multiplex PCR tests were performed targeting three C. burnetii specific genes. C. burnetii was not detected although a Coxiella-like endosymbiont was identified that was closely related to Coxiella symbionts from Ornithodoros capensis ticks. Because domestic and wild ungulates are the primary source of C. burnetii, we suggest that the presence of free-ranging, native and non-native ungulates in some off-shore islands in the Arabian Gulf could disseminate C. burnetii to seabirds. More comprehensive studies on seabird colonies are needed to better understand the diversity and prevalence of Coxiella symbionts and to establish if C. burnetii is endemic on some of these islands.
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Affiliation(s)
- Mohammad A Al-Deeb
- Department of Biology, United Arab Emirates University, PO Box 15551, Al Ain, United Arab Emirates
| | | | - Mathias C Walter
- Bundeswehr Institute of Microbiology, Neuherbergstr. 11, 80937 Munich, Germany
| | - Daniela Kömpf
- Q fever Consulting Laboratory, Baden-Württemberg State Health Office, Nordbahnhofstraße 135, 70191 Stuttgart, Germany
| | - Silke F Fischer
- Q fever Consulting Laboratory, Baden-Württemberg State Health Office, Nordbahnhofstraße 135, 70191 Stuttgart, Germany
| | - Trevor Petney
- Department of Ecology and Parasitology, Karlsruhe Institute of Technology, Kornblumenstrasse 13, 76131 Karlsruhe, Germany
| | - Sabir Bin Muzaffar
- Department of Biology, United Arab Emirates University, PO Box 15551, Al Ain, United Arab Emirates.
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Duron O, Sidi-Boumedine K, Rousset E, Moutailler S, Jourdain E. The Importance of Ticks in Q Fever Transmission: What Has (and Has Not) Been Demonstrated? Trends Parasitol 2015; 31:536-552. [PMID: 26458781 DOI: 10.1016/j.pt.2015.06.014] [Citation(s) in RCA: 121] [Impact Index Per Article: 13.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2015] [Revised: 06/22/2015] [Accepted: 06/24/2015] [Indexed: 10/22/2022]
Abstract
Q fever is a widespread zoonotic disease caused by Coxiella burnetii, a ubiquitous intracellular bacterium infecting humans and a variety of animals. Transmission is primarily but not exclusively airborne, and ticks are usually thought to act as vectors. We argue that, although ticks may readily transmit C. burnetii in experimental systems, they only occasionally transmit the pathogen in the field. Furthermore, we underscore that many Coxiella-like bacteria are widespread in ticks and may have been misidentified as C. burnetii. Our recommendation is to improve the methods currently used to detect and characterize C. burnetii, and we propose that further knowledge of Coxiella-like bacteria will yield new insights into Q fever evolutionary ecology and C. burnetii virulence factors.
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Affiliation(s)
- Olivier Duron
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (CNRS) Unité Mixte de Recherche UMR 5290, Université Montpellier 1 - Université Montpellier 2 - Institut pour la Recherche et le Développement, Unité de Recherche UR 224, Montpellier, France
| | - Karim Sidi-Boumedine
- Anses, Sophia-Antipolis Laboratory, Animal Q fever Unit, Sophia-Antipolis, France
| | - Elodie Rousset
- Anses, Sophia-Antipolis Laboratory, Animal Q fever Unit, Sophia-Antipolis, France
| | - Sara Moutailler
- UMR Biologie Moléculaire et Immunologie Parasitaires et Fongiques (BIPAR), Laboratoire Santé Animale, ANSES, Institut National de la Recherche Agronomique (INRA), Ecole Nationale Vétérinaire d'Alfort (ENVA), Maisons-Alfort, France
| | - Elsa Jourdain
- Unité d'Epidémiologie Animale, UR 0346 INRA, Saint Genès Champanelle, France.
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Muñoz-Leal S, González-Acuña D. The tick Ixodes uriae (Acari: Ixodidae): Hosts, geographical distribution, and vector roles. Ticks Tick Borne Dis 2015; 6:843-68. [PMID: 26249749 DOI: 10.1016/j.ttbdis.2015.07.014] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/07/2014] [Revised: 06/30/2015] [Accepted: 07/21/2015] [Indexed: 11/30/2022]
Abstract
The seabird tick Ixodes uriae White 1852, has the most extensive geographical distribution of all tick species, including Afrotropical, Australasian, Nearctic, Neotropical and Palearctic Zoogeographic Regions. Additionally, this tick species parasitizes a wide range of seabirds and constitutes a host for several viral and bacterial agents. Considering the current biological knowledge about this tick species, in this article we list localities, hosts, tick-borne microorganisms and viruses transmitted by I. uriae described in the literature and include new geographical records.
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Affiliation(s)
- Sebastián Muñoz-Leal
- Departamento de Medicina Veterinária Preventiva e Saúde Animal, Faculdade de Medicina Veterinária e Zootecnia, Universidade de São Paulo, Av. Prof. Orlando Marques de Paiva, 87, Cidade Universitária, São Paulo, SP 05508-270, Brasil; Departamento de Ciencias Pecuarias, Facultad de Ciencias Veterinarias, Universidad de Concepción, Av. Vicente Méndez 595, CP 3780000, Chillán (Biobío), Chile.
| | - Daniel González-Acuña
- Departamento de Ciencias Pecuarias, Facultad de Ciencias Veterinarias, Universidad de Concepción, Av. Vicente Méndez 595, CP 3780000, Chillán (Biobío), Chile.
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Serological evidence for the circulation of flaviviruses in seabird populations of the western Indian Ocean. Epidemiol Infect 2015; 144:652-60. [PMID: 26194365 DOI: 10.1017/s0950268815001661] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022] Open
Abstract
Birds play a central role in the epidemiology of several flaviviruses of concern for public and veterinary health. Seabirds represent the most abundant and widespread avifauna in the western Indian Ocean and may play an important role as host reservoirs and spreaders of arthropod-borne pathogens such as flaviviruses. We report the results of a serological investigation based on blood samples collected from nine seabird species from seven islands in the Indian Ocean. Using a commercial competitive enzyme-linked immunosorbent assay directed against the prototypic West Nile flavivirus, antibodies against flaviviruses were detected in the serum of 47 of the 855 seabirds tested. They were detected in bird samples from three islands and from four bird species. Seroneutralization tests on adults and chicks suggested that great frigatebirds (Fregata minor) from Europa were infected by West Nile virus during their non-breeding period, and that Usutu virus probably circulated within bird colonies on Tromelin and on Juan de Nova. Real-time polymerase chain reactions performed on bird blood samples did not yield positive results precluding the genetic characterization of flavivirus using RNA sequencing. Our findings stress the need to further investigate flavivirus infections in arthropod vectors present in seabird colonies.
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22
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Gottlieb Y, Lalzar I, Klasson L. Distinctive Genome Reduction Rates Revealed by Genomic Analyses of Two Coxiella-Like Endosymbionts in Ticks. Genome Biol Evol 2015; 7:1779-96. [PMID: 26025560 PMCID: PMC4494066 DOI: 10.1093/gbe/evv108] [Citation(s) in RCA: 105] [Impact Index Per Article: 11.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022] Open
Abstract
Genome reduction is a hallmark of symbiotic genomes, and the rate and patterns of gene loss associated with this process have been investigated in several different symbiotic systems. However, in long-term host-associated coevolving symbiont clades, the genome size differences between strains are normally quite small and hence patterns of large-scale genome reduction can only be inferred from distant relatives. Here we present the complete genome of a Coxiella-like symbiont from Rhipicephalus turanicus ticks (CRt), and compare it with other genomes from the genus Coxiella in order to investigate the process of genome reduction in a genus consisting of intracellular host-associated bacteria with variable genome sizes. The 1.7-Mb CRt genome is larger than the genomes of most obligate mutualists but has a very low protein-coding content (48.5%) and an extremely high number of identifiable pseudogenes, indicating that it is currently undergoing genome reduction. Analysis of encoded functions suggests that CRt is an obligate tick mutualist, as indicated by the possible provisioning of the tick with biotin (B7), riboflavin (B2) and other cofactors, and by the loss of most genes involved in host cell interactions, such as secretion systems. Comparative analyses between CRt and the 2.5 times smaller genome of Coxiella from the lone star tick Amblyomma americanum (CLEAA) show that many of the same gene functions are lost and suggest that the large size difference might be due to a higher rate of genome evolution in CLEAA generated by the loss of the mismatch repair genes mutSL. Finally, sequence polymorphisms in the CRt population sampled from field collected ticks reveal up to one distinct strain variant per tick, and analyses of mutational patterns within the population suggest that selection might be acting on synonymous sites. The CRt genome is an extreme example of a symbiont genome caught in the act of genome reduction, and the comparison between CLEAA and CRt indicates that losses of particular genes early on in this process can potentially greatly influence the speed of this process.
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Affiliation(s)
- Yuval Gottlieb
- Koret School of Veterinary Medicine, The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel
| | - Itai Lalzar
- Koret School of Veterinary Medicine, The Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, Rehovot, Israel
| | - Lisa Klasson
- Molecular Evolution, Department of Cell and Molecular Biology, Uppsala University, Sweden
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Duron O, Noël V, McCoy KD, Bonazzi M, Sidi-Boumedine K, Morel O, Vavre F, Zenner L, Jourdain E, Durand P, Arnathau C, Renaud F, Trape JF, Biguezoton AS, Cremaschi J, Dietrich M, Léger E, Appelgren A, Dupraz M, Gómez-Díaz E, Diatta G, Dayo GK, Adakal H, Zoungrana S, Vial L, Chevillon C. The Recent Evolution of a Maternally-Inherited Endosymbiont of Ticks Led to the Emergence of the Q Fever Pathogen, Coxiella burnetii. PLoS Pathog 2015; 11:e1004892. [PMID: 25978383 PMCID: PMC4433120 DOI: 10.1371/journal.ppat.1004892] [Citation(s) in RCA: 187] [Impact Index Per Article: 20.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2015] [Accepted: 04/17/2015] [Indexed: 12/16/2022] Open
Abstract
Q fever is a highly infectious disease with a worldwide distribution. Its causative agent, the intracellular bacterium Coxiella burnetii, infects a variety of vertebrate species, including humans. Its evolutionary origin remains almost entirely unknown and uncertainty persists regarding the identity and lifestyle of its ancestors. A few tick species were recently found to harbor maternally-inherited Coxiella-like organisms engaged in symbiotic interactions, but their relationships to the Q fever pathogen remain unclear. Here, we extensively sampled ticks, identifying new and atypical Coxiella strains from 40 of 58 examined species, and used this data to infer the evolutionary processes leading to the emergence of C. burnetii. Phylogenetic analyses of multi-locus typing and whole-genome sequencing data revealed that Coxiella-like organisms represent an ancient and monophyletic group allied to ticks. Remarkably, all known C. burnetii strains originate within this group and are the descendants of a Coxiella-like progenitor hosted by ticks. Using both colony-reared and field-collected gravid females, we further establish the presence of highly efficient maternal transmission of these Coxiella-like organisms in four examined tick species, a pattern coherent with an endosymbiotic lifestyle. Our laboratory culture assays also showed that these Coxiella-like organisms were not amenable to culture in the vertebrate cell environment, suggesting different metabolic requirements compared to C. burnetii. Altogether, this corpus of data demonstrates that C. burnetii recently evolved from an inherited symbiont of ticks which succeeded in infecting vertebrate cells, likely by the acquisition of novel virulence factors. How virulent infectious diseases emerge from non-pathogenic organisms is a challenging question. Here, we address this evolutionary issue in the case of Q fever. Its causative agent, the intracellular bacterium Coxiella burnetii, is extremely infectious to humans and a variety of animals. However, uncertainty persists regarding its evolutionary origin, including the identity and lifestyle of its ancestors. In this article, we show that C. burnetii arose from a rare evolutionary transformation of a maternally-inherited endosymbiont of ticks into a specialized and virulent pathogen of vertebrates. While arthropod symbionts are typically transmitted maternally and thought not to be infectious to vertebrates, we establish here that one Coxiella symbiont has evolved the necessary adaptations to exploit the vertebrate cell, leading to the emergence of Q fever.
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Affiliation(s)
- Olivier Duron
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (UMR5290)—Université de Montpellier—Institut pour la Recherche et le Développement (UR 224), Montpellier, France
- * E-mail:
| | - Valérie Noël
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (UMR5290)—Université de Montpellier—Institut pour la Recherche et le Développement (UR 224), Montpellier, France
| | - Karen D. McCoy
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (UMR5290)—Université de Montpellier—Institut pour la Recherche et le Développement (UR 224), Montpellier, France
| | - Matteo Bonazzi
- Centre d’études d’agents Pathogènes et Biotechnologies pour la Santé (CPBS), Centre National de la Recherche Scientifique (UMR5236)—Université de Montpellier, Montpellier, France
| | - Karim Sidi-Boumedine
- National Reference Laboratory on Q Fever, French Agency for Food, Environmental and Occupational Health Safety (ANSES), Sophia-Antipolis, France
| | - Olivier Morel
- Laboratoire de Biométrie et Biologie Évolutive (LBBE), Centre National de la Recherche Scientifique (UMR5558)—Université Claude Bernard Lyon 1, Villeurbanne, France
| | - Fabrice Vavre
- Laboratoire de Biométrie et Biologie Évolutive (LBBE), Centre National de la Recherche Scientifique (UMR5558)—Université Claude Bernard Lyon 1, Villeurbanne, France
| | - Lionel Zenner
- Laboratoire de Biométrie et Biologie Évolutive (LBBE), Centre National de la Recherche Scientifique (UMR5558)—Université Claude Bernard Lyon 1, Villeurbanne, France
| | - Elsa Jourdain
- Unité d'Epidémiologie Animale, Institut National de le Recherche Agronomique (UR346), Saint Genès Champanelle, France
| | - Patrick Durand
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (UMR5290)—Université de Montpellier—Institut pour la Recherche et le Développement (UR 224), Montpellier, France
| | - Céline Arnathau
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (UMR5290)—Université de Montpellier—Institut pour la Recherche et le Développement (UR 224), Montpellier, France
| | - François Renaud
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (UMR5290)—Université de Montpellier—Institut pour la Recherche et le Développement (UR 224), Montpellier, France
| | - Jean-François Trape
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (UMR5290)—Université de Montpellier—Institut pour la Recherche et le Développement (UR 224), Montpellier, France
| | - Abel S. Biguezoton
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (UMR5290)—Université de Montpellier—Institut pour la Recherche et le Développement (UR 224), Montpellier, France
- Unité de Recherche sur les Bases Biologiques de la lutte intégrée (URBIO), Centre International de Recherche-Développement sur l'Elevage en zone Subhumide (CIRDES), Bobo-Dioulasso, Burkina Faso
| | - Julie Cremaschi
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (UMR5290)—Université de Montpellier—Institut pour la Recherche et le Développement (UR 224), Montpellier, France
| | - Muriel Dietrich
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (UMR5290)—Université de Montpellier—Institut pour la Recherche et le Développement (UR 224), Montpellier, France
| | - Elsa Léger
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (UMR5290)—Université de Montpellier—Institut pour la Recherche et le Développement (UR 224), Montpellier, France
| | - Anaïs Appelgren
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (UMR5290)—Université de Montpellier—Institut pour la Recherche et le Développement (UR 224), Montpellier, France
| | - Marlène Dupraz
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (UMR5290)—Université de Montpellier—Institut pour la Recherche et le Développement (UR 224), Montpellier, France
| | - Elena Gómez-Díaz
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (UMR5290)—Université de Montpellier—Institut pour la Recherche et le Développement (UR 224), Montpellier, France
- Biology Department, O. Wayne Rollins Research Center, Emory University, Atlanta, Georgia, United States of America
| | - Georges Diatta
- Unité de Recherche sur les Maladies Infectieuses et Tropicales Emergentes (URMITE), Centre National de la Recherche Scientifique (UMR6236)—Aix Marseille Université, Dakar, Sénégal
| | - Guiguigbaza-Kossigan Dayo
- Unité de Recherche sur les Bases Biologiques de la lutte intégrée (URBIO), Centre International de Recherche-Développement sur l'Elevage en zone Subhumide (CIRDES), Bobo-Dioulasso, Burkina Faso
| | - Hassane Adakal
- Unité de Recherche sur les Bases Biologiques de la lutte intégrée (URBIO), Centre International de Recherche-Développement sur l'Elevage en zone Subhumide (CIRDES), Bobo-Dioulasso, Burkina Faso
- Département des Sciences et Techniques de l’Elevage (DSTE/FASE), Université Dan Dicko Dan Koulodo, Maradi, Niger
| | - Sébastien Zoungrana
- Unité de Recherche sur les Bases Biologiques de la lutte intégrée (URBIO), Centre International de Recherche-Développement sur l'Elevage en zone Subhumide (CIRDES), Bobo-Dioulasso, Burkina Faso
| | - Laurence Vial
- Centre de Coopération Internationale en Recherche Agronomique pour le Développement (CIRAD), Prades-le-Lez, France
| | - Christine Chevillon
- Laboratoire MIVEGEC (Maladies Infectieuses et Vecteurs: Ecologie, Génétique, Evolution et Contrôle), Centre National de la Recherche Scientifique (UMR5290)—Université de Montpellier—Institut pour la Recherche et le Développement (UR 224), Montpellier, France
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Paparini A, McInnes LM, Di Placido D, Mackereth G, Tompkins DM, Clough R, Ryan UM, Irwin PJ. Piroplasms of New Zealand seabirds. Parasitol Res 2014; 113:4407-14. [PMID: 25204728 DOI: 10.1007/s00436-014-4118-z] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/05/2014] [Accepted: 08/27/2014] [Indexed: 12/16/2022]
Abstract
Blood and ectoparasitic ticks were collected from migratory seabirds in New Zealand, including Australasian gannets (n = 13) from two sites and red-billed gulls (n = 9) and white-fronted terns (n = 2) from a third location. Blood smears were screened for parasite presence by microscopy, while DNA from blood samples was subjected to PCR for the presence of tick-transmitted protozoan haemoparasites belonging to the order Piroplasmida. Parasites were identified by comparing small subunit ribosomal RNA (18S rDNA) gene sequences to related sequences on GenBank. Analyses indicated that nine birds were infected with unknown variants of a Babesia poelea-like parasite (recorded as genotypes I and II), while four harboured a piroplasm that was genetically similar to Babesia kiwiensis. There was no parasite stratification by bird species; both the gannets and gulls were positive for all three parasites, while the terns were positive for the B. kiwiensis-like and the B. poelea-like (genotype I) parasites. The B. kiwiensis-like parasite found in the birds was also found in two species of ticks: Carios capensis and Ixodes eudyptidis. This represents the first report of Babesia-positive ticks parasitising seabirds in New Zealand. The lack of host specificity and evidence of wide ranging distributions of the three piroplasm genotypes suggests there is a high degree of haemoparasite transmission occurring naturally between New Zealand seabird populations and species.
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Affiliation(s)
- Andrea Paparini
- Vector and Waterborne Pathogen Research Group, School of Veterinary & Life Sciences, Murdoch University, 90 South Street, Murdoch, WA, 6150, Australia
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25
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Duron O, Jourdain E, McCoy KD. Diversity and global distribution of the Coxiella intracellular bacterium in seabird ticks. Ticks Tick Borne Dis 2014; 5:557-63. [DOI: 10.1016/j.ttbdis.2014.04.003] [Citation(s) in RCA: 62] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2014] [Revised: 04/04/2014] [Accepted: 04/07/2014] [Indexed: 01/27/2023]
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