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For: Svenning MM, Hestnes AG, Wartiainen I, Stein LY, Klotz MG, Kalyuzhnaya MG, Spang A, Bringel F, Vuilleumier S, Lajus A, Médigue C, Bruce DC, Cheng JF, Goodwin L, Ivanova N, Han J, Han CS, Hauser L, Held B, Land ML, Lapidus A, Lucas S, Nolan M, Pitluck S, Woyke T. Genome sequence of the Arctic methanotroph Methylobacter tundripaludum SV96. J Bacteriol 2011;193:6418-9. [PMID: 21725021 DOI: 10.1128/JB.05380-11] [Citation(s) in RCA: 46] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]  Open
Number Cited by Other Article(s)
1
Wutkowska M, Daebeler A. Draft genomes of three aerobic methanotrophs from a temperate eutrophic fishpond. Microbiol Resour Announc 2024;13:e0015224. [PMID: 38526089 PMCID: PMC11008168 DOI: 10.1128/mra.00152-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/19/2024] [Accepted: 03/15/2024] [Indexed: 03/26/2024]  Open
2
Patil SK, Islam T, Tveit A, Hodson A, Øvreås L. Targeting methanotrophs and isolation of a novel psychrophilic Methylobacter species from a terrestrial Arctic alkaline methane seep in Lagoon Pingo, Central Spitsbergen (78° N). Antonie Van Leeuwenhoek 2024;117:60. [PMID: 38517574 PMCID: PMC10959801 DOI: 10.1007/s10482-024-01953-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2023] [Accepted: 02/19/2024] [Indexed: 03/24/2024]
3
Tucci FJ, Rosenzweig AC. Direct Methane Oxidation by Copper- and Iron-Dependent Methane Monooxygenases. Chem Rev 2024;124:1288-1320. [PMID: 38305159 PMCID: PMC10923174 DOI: 10.1021/acs.chemrev.3c00727] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/03/2024]
4
Goraj W, Pytlak A, Grządziel J, Gałązka A, Stępniewska Z, Szafranek-Nakonieczna A. Dynamics of Methane-Consuming Biomes from Wieliczka Formation: Environmental and Enrichment Studies. BIOLOGY 2023;12:1420. [PMID: 37998019 PMCID: PMC10669130 DOI: 10.3390/biology12111420] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2023] [Revised: 11/02/2023] [Accepted: 11/07/2023] [Indexed: 11/25/2023]
5
Liu Y, Zhang B, Zhang Y, Shen Y, Cheng C, Yuan W, Guo P. Organic Matter Decomposition in River Ecosystems: Microbial Interactions Influenced by Total Nitrogen and Temperature in River Water. MICROBIAL ECOLOGY 2023;85:1236-1252. [PMID: 35501499 DOI: 10.1007/s00248-022-02013-9] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/01/2021] [Accepted: 04/11/2022] [Indexed: 05/10/2023]
6
Cre/lox-Mediated CRISPRi Library Reveals Core Genome of a Type I Methanotroph Methylotuvimicrobium buryatense 5GB1C. Appl Environ Microbiol 2023;89:e0188322. [PMID: 36622175 PMCID: PMC9888281 DOI: 10.1128/aem.01883-22] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]  Open
7
Yao X, Wang J, Hu B. How methanotrophs respond to pH: A review of ecophysiology. Front Microbiol 2023;13:1034164. [PMID: 36687570 PMCID: PMC9853399 DOI: 10.3389/fmicb.2022.1034164] [Citation(s) in RCA: 7] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/01/2022] [Accepted: 12/09/2022] [Indexed: 01/08/2023]  Open
8
Yun J, Crombie AT, Ul Haque MF, Cai Y, Zheng X, Wang J, Jia Z, Murrell JC, Wang Y, Du W. Revealing the community and metabolic potential of active methanotrophs by targeted metagenomics in the Zoige wetland of the Tibetan Plateau. Environ Microbiol 2021;23:6520-6535. [PMID: 34390603 DOI: 10.1111/1462-2920.15697] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/23/2021] [Revised: 07/27/2021] [Accepted: 07/27/2021] [Indexed: 01/21/2023]
9
Koo CW, Rosenzweig AC. Biochemistry of aerobic biological methane oxidation. Chem Soc Rev 2021;50:3424-3436. [PMID: 33491685 PMCID: PMC7965334 DOI: 10.1039/d0cs01291b] [Citation(s) in RCA: 58] [Impact Index Per Article: 19.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
10
Schmitz RA, Peeters SH, Versantvoort W, Picone N, Pol A, Jetten MSM, Op den Camp HJM. Verrucomicrobial methanotrophs: ecophysiology of metabolically versatile acidophiles. FEMS Microbiol Rev 2021;45:6125968. [PMID: 33524112 PMCID: PMC8498564 DOI: 10.1093/femsre/fuab007] [Citation(s) in RCA: 44] [Impact Index Per Article: 14.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/16/2020] [Accepted: 01/15/2021] [Indexed: 12/26/2022]  Open
11
Poghosyan L, Koch H, Frank J, van Kessel MAHJ, Cremers G, van Alen T, Jetten MSM, Op den Camp HJM, Lücker S. Metagenomic profiling of ammonia- and methane-oxidizing microorganisms in two sequential rapid sand filters. WATER RESEARCH 2020;185:116288. [PMID: 32810745 DOI: 10.1016/j.watres.2020.116288] [Citation(s) in RCA: 33] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/20/2020] [Revised: 07/17/2020] [Accepted: 08/09/2020] [Indexed: 05/22/2023]
12
Islam MM, Le T, Daggumati SR, Saha R. Investigation of microbial community interactions between Lake Washington methanotrophs using -------genome-scale metabolic modeling. PeerJ 2020;8:e9464. [PMID: 32655999 PMCID: PMC7333651 DOI: 10.7717/peerj.9464] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2020] [Accepted: 06/10/2020] [Indexed: 11/21/2022]  Open
13
van Grinsven S, Sinninghe Damsté JS, Harrison J, Villanueva L. Impact of Electron Acceptor Availability on Methane-Influenced Microorganisms in an Enrichment Culture Obtained From a Stratified Lake. Front Microbiol 2020;11:715. [PMID: 32477281 PMCID: PMC7240106 DOI: 10.3389/fmicb.2020.00715] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2019] [Accepted: 03/27/2020] [Indexed: 12/26/2022]  Open
14
van Grinsven S, Sinninghe Damsté JS, Abdala Asbun A, Engelmann JC, Harrison J, Villanueva L. Methane oxidation in anoxic lake water stimulated by nitrate and sulfate addition. Environ Microbiol 2020;22:766-782. [PMID: 31814267 PMCID: PMC7027835 DOI: 10.1111/1462-2920.14886] [Citation(s) in RCA: 29] [Impact Index Per Article: 7.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2019] [Revised: 11/21/2019] [Accepted: 12/04/2019] [Indexed: 11/30/2022]
15
López JC, Porca E, Collins G, Clifford E, Quijano G, Muñoz R. Ammonium influences kinetics and structure of methanotrophic consortia. WASTE MANAGEMENT (NEW YORK, N.Y.) 2019;89:345-353. [PMID: 31079748 DOI: 10.1016/j.wasman.2019.04.028] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/11/2018] [Revised: 04/02/2019] [Accepted: 04/12/2019] [Indexed: 06/09/2023]
16
Rahalkar MC, Khatri K, Pandit PS, Dhakephalkar PK. A putative novel Methylobacter member (KRF1) from the globally important Methylobacter clade 2: cultivation and salient draft genome features. Antonie van Leeuwenhoek 2019;112:1399-1408. [PMID: 30968234 DOI: 10.1007/s10482-019-01262-y] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2019] [Accepted: 04/02/2019] [Indexed: 11/28/2022]
17
Esparza M, Jedlicki E, González C, Dopson M, Holmes DS. Effect of CO2 Concentration on Uptake and Assimilation of Inorganic Carbon in the Extreme Acidophile Acidithiobacillus ferrooxidans. Front Microbiol 2019;10:603. [PMID: 31019493 PMCID: PMC6458275 DOI: 10.3389/fmicb.2019.00603] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/02/2018] [Accepted: 03/11/2019] [Indexed: 02/01/2023]  Open
18
Smith GJ, Angle JC, Solden LM, Borton MA, Morin TH, Daly RA, Johnston MD, Stefanik KC, Wolfe R, Gil B, Wrighton KC. Members of the Genus Methylobacter Are Inferred To Account for the Majority of Aerobic Methane Oxidation in Oxic Soils from a Freshwater Wetland. mBio 2018;9:e00815-18. [PMID: 30401770 PMCID: PMC6222125 DOI: 10.1128/mbio.00815-18] [Citation(s) in RCA: 37] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2018] [Accepted: 10/01/2018] [Indexed: 11/20/2022]  Open
19
Matheus Carnevali PB, Herbold CW, Hand KP, Priscu JC, Murray AE. Distinct Microbial Assemblage Structure and Archaeal Diversity in Sediments of Arctic Thermokarst Lakes Differing in Methane Sources. Front Microbiol 2018;9:1192. [PMID: 29930542 PMCID: PMC6000721 DOI: 10.3389/fmicb.2018.01192] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2017] [Accepted: 05/16/2018] [Indexed: 12/04/2022]  Open
20
Mateos-Rivera A, Islam T, Marshall IPG, Schreiber L, Øvreås L. High-quality draft genome of the methanotroph Methylovulum psychrotolerans Str. HV10-M2 isolated from plant material at a high-altitude environment. Stand Genomic Sci 2018;13:10. [PMID: 29686747 PMCID: PMC5898042 DOI: 10.1186/s40793-018-0314-2] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2017] [Accepted: 04/04/2018] [Indexed: 11/10/2022]  Open
21
Martinez-Cruz K, Leewis MC, Herriott IC, Sepulveda-Jauregui A, Anthony KW, Thalasso F, Leigh MB. Anaerobic oxidation of methane by aerobic methanotrophs in sub-Arctic lake sediments. THE SCIENCE OF THE TOTAL ENVIRONMENT 2017;607-608:23-31. [PMID: 28686892 DOI: 10.1016/j.scitotenv.2017.06.187] [Citation(s) in RCA: 66] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2017] [Revised: 06/20/2017] [Accepted: 06/22/2017] [Indexed: 05/25/2023]
22
Quorum Sensing in a Methane-Oxidizing Bacterium. J Bacteriol 2017;199:JB.00773-16. [PMID: 27994019 DOI: 10.1128/jb.00773-16] [Citation(s) in RCA: 24] [Impact Index Per Article: 3.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2016] [Accepted: 12/15/2016] [Indexed: 12/12/2022]  Open
23
Zhu J, Wang Q, Yuan M, Tan GYA, Sun F, Wang C, Wu W, Lee PH. Microbiology and potential applications of aerobic methane oxidation coupled to denitrification (AME-D) process: A review. WATER RESEARCH 2016;90:203-215. [PMID: 26734780 DOI: 10.1016/j.watres.2015.12.020] [Citation(s) in RCA: 84] [Impact Index Per Article: 10.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/25/2015] [Revised: 12/10/2015] [Accepted: 12/12/2015] [Indexed: 06/05/2023]
24
Knief C. Diversity and Habitat Preferences of Cultivated and Uncultivated Aerobic Methanotrophic Bacteria Evaluated Based on pmoA as Molecular Marker. Front Microbiol 2015;6:1346. [PMID: 26696968 PMCID: PMC4678205 DOI: 10.3389/fmicb.2015.01346] [Citation(s) in RCA: 259] [Impact Index Per Article: 28.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2015] [Accepted: 11/16/2015] [Indexed: 01/06/2023]  Open
25
Kits KD, Campbell DJ, Rosana AR, Stein LY. Diverse electron sources support denitrification under hypoxia in the obligate methanotroph Methylomicrobium album strain BG8. Front Microbiol 2015;6:1072. [PMID: 26500622 PMCID: PMC4594100 DOI: 10.3389/fmicb.2015.01072] [Citation(s) in RCA: 72] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/13/2015] [Accepted: 09/18/2015] [Indexed: 11/30/2022]  Open
26
Methylotrophs in natural habitats: current insights through metagenomics. Appl Microbiol Biotechnol 2015;99:5763-79. [PMID: 26051673 DOI: 10.1007/s00253-015-6713-z] [Citation(s) in RCA: 71] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2015] [Revised: 05/15/2015] [Accepted: 05/19/2015] [Indexed: 01/10/2023]
27
Tveit AT, Urich T, Frenzel P, Svenning MM. Metabolic and trophic interactions modulate methane production by Arctic peat microbiota in response to warming. Proc Natl Acad Sci U S A 2015;112:E2507-16. [PMID: 25918393 PMCID: PMC4434766 DOI: 10.1073/pnas.1420797112] [Citation(s) in RCA: 101] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]  Open
28
Methane-fed microbial microcosms show differential community dynamics and pinpoint taxa involved in communal response. ISME JOURNAL 2014;9:1119-29. [PMID: 25333464 DOI: 10.1038/ismej.2014.203] [Citation(s) in RCA: 78] [Impact Index Per Article: 7.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2014] [Revised: 09/11/2014] [Accepted: 09/22/2014] [Indexed: 11/08/2022]
29
Quaiser A, Bodi X, Dufresne A, Naquin D, Francez AJ, Dheilly A, Coudouel S, Pedrot M, Vandenkoornhuyse P. Unraveling the stratification of an iron-oxidizing microbial mat by metatranscriptomics. PLoS One 2014;9:e102561. [PMID: 25033299 PMCID: PMC4102501 DOI: 10.1371/journal.pone.0102561] [Citation(s) in RCA: 27] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2014] [Accepted: 06/19/2014] [Indexed: 02/02/2023]  Open
30
Metatranscriptomic analysis of arctic peat soil microbiota. Appl Environ Microbiol 2014;80:5761-72. [PMID: 25015892 DOI: 10.1128/aem.01030-14] [Citation(s) in RCA: 84] [Impact Index Per Article: 8.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
31
Johnson KA, Ve T, Larsen Ø, Pedersen RB, Lillehaug JR, Jensen HB, Helland R, Karlsen OA. CorA is a copper repressible surface-associated copper(I)-binding protein produced in Methylomicrobium album BG8. PLoS One 2014;9:e87750. [PMID: 24498370 PMCID: PMC3912023 DOI: 10.1371/journal.pone.0087750] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/10/2013] [Accepted: 12/30/2013] [Indexed: 11/18/2022]  Open
32
刘 建. The Application of High-Throughput Sequencing Technologies in the Research of Wetland Microbiology. INTERNATIONAL JOURNAL OF ECOLOGY 2014. [DOI: 10.12677/ije.2014.34009] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
33
Urich T, Lanzén A, Stokke R, Pedersen RB, Bayer C, Thorseth IH, Schleper C, Steen IH, Øvreas L. Microbial community structure and functioning in marine sediments associated with diffuse hydrothermal venting assessed by integrated meta-omics. Environ Microbiol 2013;16:2699-710. [DOI: 10.1111/1462-2920.12283] [Citation(s) in RCA: 67] [Impact Index Per Article: 6.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/29/2013] [Revised: 08/23/2013] [Accepted: 09/09/2013] [Indexed: 11/27/2022]
34
Dam B, Dam S, Blom J, Liesack W. Genome analysis coupled with physiological studies reveals a diverse nitrogen metabolism in Methylocystis sp. strain SC2. PLoS One 2013;8:e74767. [PMID: 24130670 PMCID: PMC3794950 DOI: 10.1371/journal.pone.0074767] [Citation(s) in RCA: 42] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2013] [Accepted: 07/28/2013] [Indexed: 01/31/2023]  Open
35
Dumont MG, Pommerenke B, Casper P. Using stable isotope probing to obtain a targeted metatranscriptome of aerobic methanotrophs in lake sediment. ENVIRONMENTAL MICROBIOLOGY REPORTS 2013;5:757-764. [PMID: 24115627 DOI: 10.1111/1758-2229.12078] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/02/2013] [Revised: 04/23/2013] [Accepted: 06/19/2013] [Indexed: 06/02/2023]
36
Rivers AR, Sharma S, Tringe SG, Martin J, Joye SB, Moran MA. Transcriptional response of bathypelagic marine bacterioplankton to the Deepwater Horizon oil spill. ISME JOURNAL 2013;7:2315-29. [PMID: 23902988 DOI: 10.1038/ismej.2013.129] [Citation(s) in RCA: 87] [Impact Index Per Article: 7.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2013] [Revised: 06/29/2013] [Accepted: 07/01/2013] [Indexed: 02/01/2023]
37
Li M, Jain S, Baker BJ, Taylor C, Dick GJ. Novel hydrocarbon monooxygenase genes in the metatranscriptome of a natural deep-sea hydrocarbon plume. Environ Microbiol 2013;16:60-71. [PMID: 23826624 DOI: 10.1111/1462-2920.12182] [Citation(s) in RCA: 53] [Impact Index Per Article: 4.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2012] [Revised: 05/10/2013] [Accepted: 06/03/2013] [Indexed: 12/30/2022]
38
Khmelenina VN, Beck DAC, Munk C, Davenport K, Daligault H, Erkkila T, Goodwin L, Gu W, Lo CC, Scholz M, Teshima H, Xu Y, Chain P, Bringel F, Vuilleumier S, DiSpirito A, Dunfield P, Jetten MSM, Klotz MG, Knief C, Murrell JC, Op den Camp HJM, Sakai Y, Semrau J, Svenning M, Stein LY, Trotsenko YA, Kalyuzhnaya MG. Draft Genome Sequence of Methylomicrobium buryatense Strain 5G, a Haloalkaline-Tolerant Methanotrophic Bacterium. GENOME ANNOUNCEMENTS 2013;1:e00053-13. [PMID: 23814105 PMCID: PMC3695433 DOI: 10.1128/genomea.00053-13] [Citation(s) in RCA: 34] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Received: 01/23/2013] [Accepted: 05/08/2013] [Indexed: 11/20/2022]
39
Ho A, Kerckhof FM, Luke C, Reim A, Krause S, Boon N, Bodelier PLE. Conceptualizing functional traits and ecological characteristics of methane-oxidizing bacteria as life strategies. ENVIRONMENTAL MICROBIOLOGY REPORTS 2013;5:335-45. [PMID: 23754714 DOI: 10.1111/j.1758-2229.2012.00370.x] [Citation(s) in RCA: 131] [Impact Index Per Article: 11.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2012] [Revised: 07/06/2012] [Accepted: 07/15/2012] [Indexed: 05/11/2023]
40
Genome Sequence of the Obligate Gammaproteobacterial Methanotroph Methylomicrobium album Strain BG8. GENOME ANNOUNCEMENTS 2013;1:e0017013. [PMID: 23580712 PMCID: PMC3624686 DOI: 10.1128/genomea.00170-13] [Citation(s) in RCA: 19] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Subscribe] [Scholar Register] [Indexed: 11/23/2022]
41
Beck DAC, Kalyuzhnaya MG, Malfatti S, Tringe SG, Glavina Del Rio T, Ivanova N, Lidstrom ME, Chistoserdova L. A metagenomic insight into freshwater methane-utilizing communities and evidence for cooperation between the Methylococcaceae and the Methylophilaceae. PeerJ 2013;1:e23. [PMID: 23638358 PMCID: PMC3628875 DOI: 10.7717/peerj.23] [Citation(s) in RCA: 89] [Impact Index Per Article: 8.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2012] [Accepted: 01/09/2013] [Indexed: 11/20/2022]  Open
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Culpepper MA, Rosenzweig AC. Architecture and active site of particulate methane monooxygenase. Crit Rev Biochem Mol Biol 2012;47:483-92. [PMID: 22725967 PMCID: PMC3474877 DOI: 10.3109/10409238.2012.697865] [Citation(s) in RCA: 115] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/13/2022]
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Organic carbon transformations in high-Arctic peat soils: key functions and microorganisms. ISME JOURNAL 2012;7:299-311. [PMID: 22955232 PMCID: PMC3554415 DOI: 10.1038/ismej.2012.99] [Citation(s) in RCA: 156] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
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Complete sequence analysis of two methanotroph-specific repABC-containing plasmids from Methylocystis sp. strain SC2. Appl Environ Microbiol 2012;78:4373-9. [PMID: 22504811 DOI: 10.1128/aem.00628-12] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
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Vuilleumier S, Khmelenina VN, Bringel F, Reshetnikov AS, Lajus A, Mangenot S, Rouy Z, Op den Camp HJM, Jetten MSM, Dispirito AA, Dunfield P, Klotz MG, Semrau JD, Stein LY, Barbe V, Médigue C, Trotsenko YA, Kalyuzhnaya MG. Genome sequence of the haloalkaliphilic methanotrophic bacterium Methylomicrobium alcaliphilum 20Z. J Bacteriol 2012;194:551-2. [PMID: 22207753 PMCID: PMC3256673 DOI: 10.1128/jb.06392-11] [Citation(s) in RCA: 48] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2011] [Accepted: 10/21/2011] [Indexed: 11/20/2022]  Open
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Nelson OW, Garrity GM. Genome sequences published outside of Standards in Genomic Sciences, October – November 2011. Stand Genomic Sci 2011. [DOI: 10.4056/sigs.2404675] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]  Open
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