Quantifying the Ocean's Biological Pump and Its Carbon Cycle Impacts on Global Scales

Temperature and nutrients drive distinct successions between diatoms and dinoflagellates over the past 40 years: Implications for climate warming and eutrophication

Diatoms and dinoflagellates are two typical functional groups of phytoplankton, playing important roles in ecosystem processes and biogeochemical cycles. Changes in diatoms and dinoflagellates are thought to be one of the possible mechanisms for the increase in harmful algal blooms (HABs), due to changing hydrological conditions associated with climate change and human activities. However, little is known about their ability to adapt to changing ocean environments, thus making it difficult to know whether and how they are adapting. By analyzing a 44-year monitoring dataset in the central Bohai Sea during 1978-2021, we found that the abundance ratio of diatoms to dinoflagellates showed a decreasing trend seasonally and ecologically, indicating that the phytoplankton community underwent distinct successional processes from diatom dominance to diatom-dinoflagellate co-dominance. These processes exhibited varying responses to temperature, nutrient concentrations and ratios, and their interactions, of which temperature primarily drove the seasonal succession whereas nutrients were responsible for the ecological succession. Specifically, diatoms showed a preference for lower temperatures and higher DIP concentrations, and were able to tolerate lower DIN at lower temperatures. In contrast, dinoflagellates tended to prevail at conditions of warming and high N/P ratios. These different traits of diatoms and dinoflagellates reflected the fact that warming as a result of rising temperature and eutrophication as a consequence of nutrient input would favor dinoflagellates over diatoms. Moreover, the increasing dominance of dinoflagellates indicated that dinoflagellate blooms were likely to become more frequent and intense in the central Bohai Sea.

The effects of bathymetry on the long-term carbon cycle and CCD

The shape of the ocean floor (bathymetry) and the overlaying sediments provide the largest carbon sink throughout Earth's history, supporting ~one to two orders of magnitude more carbon storage than the oceans and atmosphere combined. While accumulation and erosion of these sediments are bathymetry dependent (e.g., due to pressure, temperature, salinity, ion concentration, and available productivity), no systemic study has quantified how global and basin scale bathymetry, controlled by the evolution of tectonics and mantle convection, affects the long-term carbon cycle. We reconstruct bathymetry spanning the last 80 Myr to describe steady-state changes in ocean chemistry within the Earth system model LOSCAR. We find that both bathymetry reconstructions and representative synthetic tests show that ocean alkalinity, calcite saturation state, and the carbonate compensation depth (CCD) are strongly dependent on changes in shallow bathymetry (ocean floor ≤600 m) and on the distribution of the deep marine regions (>1,000 m). Limiting Cenozoic evolution to bathymetry alone leads to predicted CCD variations spanning 500 m, 33 to 50% of the total observed variations in the paleoproxy records. Our results suggest that neglecting bathymetric changes leads to significant misattribution to uncertain carbon cycle parameters (e.g., atmospheric CO2 and water column temperature) and processes (e.g., biological pump efficiency and silicate-carbonate riverine flux). To illustrate this point, we use our updated bathymetry for an Early Paleogene C cycle case study. We obtain carbonate riverine flux estimates that suggest a reversal of the weathering trend with respect to present-day, contrasting with previous studies, but consistent with proxy records and tectonic reconstructions.

RotoBOD─Quantifying Oxygen Consumption by Suspended Particles and Organisms

Sinking or floating is the natural state of planktonic organisms and particles in the ocean. Simulating these conditions is critical when making measurements, such as respirometry, because they allow the natural exchange of substrates and products between sinking particles and water flowing around them and prevent organisms that are accustomed to motion from changing their metabolism. We developed a rotating incubator, the RotoBOD (named after its capability to rotate and determine biological oxygen demand, BOD), that uniquely enables automated oxygen measurements in small volumes while keeping the samples in their natural state of suspension. This allows highly sensitive rate measurements of oxygen utilization and subsequent characterization of single particles or small planktonic organisms, such as copepods, jellyfish, or protists. As this approach is nondestructive, it can be combined with several further measurements during and after the incubation, such as stable isotope additions and molecular analyses. This makes the instrument useful for ecologists, biogeochemists, and potentially other user groups such as aquaculture facilities. Here, we present the technical background of our newly developed apparatus and provide examples of how it can be utilized to determine oxygen production and consumption in small organisms and particles.

Anomalous trends in global ocean carbon concentrations following the 2022 eruptions of Hunga Tonga-Hunga Ha'apai

We report on observed trend anomalies in climate-relevant global ocean biogeochemical properties, as derived from satellite ocean color measurements, that show a substantial decline in phytoplankton carbon concentrations following eruptions of the submarine volcano Hunga Tonga-Hunga Ha'apai in January 2022. The anomalies are seen in remotely-sensed ocean color data sets from multiple satellite missions, but not in situ observations, thus suggesting that the observed anomalies are a result of ocean color retrieval errors rather than indicators of a major shift in phytoplankton carbon concentrations. The enhanced concentration of aerosols in the stratosphere following the eruptions results in a violation of some fundamental assumptions in the processing algorithms used to obtain marine biogeochemical properties from satellite radiometric observations, and it is demonstrated through radiative transfer simulations that this is the likely cause of the anomalous trends. We note that any future stratospheric aerosol disturbances, either natural or geoengineered, may lead to similar artifacts in satellite ocean color and other remote-sensing measurements of the marine environment, thus confounding our ability to track the impact of such events on ocean ecosystems.

3D intrusions transport active surface microbial assemblages to the dark ocean

Subtropical oceans contribute significantly to global primary production, but the fate of the picophytoplankton that dominate in these low-nutrient regions is poorly understood. Working in the subtropical Mediterranean, we demonstrate that subduction of water at ocean fronts generates 3D intrusions with uncharacteristically high carbon, chlorophyll, and oxygen that extend below the sunlit photic zone into the dark ocean. These contain fresh picophytoplankton assemblages that resemble the photic-zone regions where the water originated. Intrusions propagate depth-dependent seasonal variations in microbial assemblages into the ocean interior. Strikingly, the intrusions included dominant biomass contributions from nonphotosynthetic bacteria and enrichment of enigmatic heterotrophic bacterial lineages. Thus, the intrusions not only deliver material that differs in composition and nutritional character from sinking detrital particles, but also drive shifts in bacterial community composition, organic matter processing, and interactions between surface and deep communities. Modeling efforts paired with global observations demonstrate that subduction can flux similar magnitudes of particulate organic carbon as sinking export, but is not accounted for in current export estimates and carbon cycle models. Intrusions formed by subduction are a particularly important mechanism for enhancing connectivity between surface and upper mesopelagic ecosystems in stratified subtropical ocean environments that are expanding due to the warming climate.

Unveiling the evolution of phytoplankton communities: Decades-long insights into the southern Yellow Sea, China (1959-2023)

We obtained historical and observational data on phytoplankton communities from 1959 to 2023 to explore the responses of the phytoplankton community structure to long-term environmental changes in the southern Yellow Sea (SYS), China. The results revealed a decrease in the proportions of diatom cell abundance within the phytoplankton community by 8 %, accompanied by a corresponding increase in that of dinoflagellates. Dominant phytoplankton species were mainly chain-forming diatoms before 2000, and large dinoflagellate species from the genera Tripos and Noctiluca increased their dominance after 2000. Warm-water phytoplankton species have increased in dominance over the study period. Correlation analysis revealed that the ocean warming and alterations in nutrient structure (N/P and Si/N ratios) were mostly responsible for the long-term evolution trend, and these changes may result in an increase in dinoflagellate harmful algal blooms, reduced efficiency of the biological carbon pump, and heightened hypoxia in the future, which should draw our attention.

Phytoplankton optical fingerprint libraries for development of phytoplankton ocean color satellite products

Phytoplankton respond to physical and hydrographic forcing on time and space scales up to and including those relevant to climate change. Quantifying changes in phytoplankton communities over these scales is essential for predicting ocean food resources, occurrences of harmful algal blooms, and carbon and other elemental cycles, among other predictions. However, one of the best tools for quantifying phytoplankton communities across relevant time and space scales, ocean color sensors, is constrained by its own spectral capabilities and availability of adequately vetted and relevant optical models. To address this later shortcoming, greater than fifty strains of phytoplankton, from a range of taxonomic lineages, geographic locations, and time in culture, alone and in mixtures, were grown to exponential and/or stationary phase for determination of hyperspectral UV-VIS absorption coefficients, multi-angle and multi-spectral backscatter coefficients, volume scattering functions, particle size distributions, pigment content, and fluorescence. The aim of this publication is to share these measurements to expedite their utilization in the development of new optical models for the next generation of ocean color satellites.

Modeling the Vertical Flux of Organic Carbon in the Global Ocean

The oceans play a fundamental role in the global carbon cycle, providing a sink for atmospheric carbon. Key to this role is the vertical transport of organic carbon from the surface to the deep ocean. This transport is a product of a diverse range of physical and biogeochemical processes that determine the formation and fate of this material, and in particular how much carbon is sequestered in the deep ocean. Models can be used to both diagnose biogeochemical processes and predict how the various processes will change in the future. Global biogeochemical models use simplified representations of food webs and processes but are converging on values for the export of organic carbon from the surface ocean. Other models concentrate on understanding specific processes and can be used to develop parameterizations for global models. Model development is continuing by adding representations and parameterizations of higher trophic levels and mesopelagic processes, and these are expected to improve model performance.

The Four-Dimensional Carbon Cycle of the Southern Ocean

The Southern Ocean plays a fundamental role in the global carbon cycle, dominating the oceanic uptake of heat and carbon added by anthropogenic activities and modulating atmospheric carbon concentrations in past, present, and future climates. However, the remote and extreme conditions found there make the Southern Ocean perpetually one of the most difficult places on the planet to observe and to model, resulting in significant and persistent uncertainties in our knowledge of the oceanic carbon cycle there. The flow of carbon in the Southern Ocean is traditionally understood using a zonal mean framework, in which the meridional overturning circulation drives the latitudinal variability observed in both air-sea flux and interior ocean carbon concentration. However, recent advances, based largely on expanded observation and modeling capabilities in the region, reveal the importance of processes acting at smaller scales, including basin-scale zonal asymmetries in mixed-layer depth, mesoscale eddies, and high-frequency atmospheric variability. Assessing the current state of knowledge and remaining gaps emphasizes the need to move beyond the zonal mean picture and embrace a four-dimensional understanding of the carbon cycle in the Southern Ocean.

Combined Use of Short-Lived Radionuclides (234Th and 210Po) as Tracers of Sinking Particles in the Ocean

Radionuclides can provide key information on the temporal dimension of environmental processes, given their well-known rates of radioactive decay and production. Naturally occurring radionuclides, such as 234Th and 210Po, have been used as powerful particle tracers in the marine environment to study particle cycling and vertical export. Since their application to quantify the magnitude of particulate organic carbon (POC) export in the 1990s, 234Th and, to a lesser extent, 210Po have been widely used to characterize the magnitude of the biological carbon pump (BCP). Combining both radionuclides, with their different half-lives, biogeochemical behaviors, and input sources to the ocean, can help to better constrain POC export and capture BCP dynamics that would be missed by a single tracer. Here, we review the studies that have simultaneously used 234Th and 210Po as tracers of POC export, emphasizing what can be learned from their joint application, and provide recommendations and future directions.

Substantial kelp detritus exported beyond the continental shelf by dense shelf water transport

Kelp forests may contribute substantially to ocean carbon sequestration, mainly through transporting kelp carbon away from the coast and into the deep sea. However, it is not clear if and how kelp detritus is transported across the continental shelf. Dense shelf water transport (DSWT) is associated with offshore flows along the seabed and provides an effective mechanism for cross-shelf transport. In this study, we determine how effective DSWT is in exporting kelp detritus beyond the continental shelf edge, by considering the transport of simulated sinking kelp detritus from a region of Australia's Great Southern Reef. We show that DSWT is the main mechanism that transports simulated kelp detritus past the continental shelf edge, and that export is negligible when DSWT does not occur. We find that 51% per year of simulated kelp detritus is transported past the continental shelf edge, or 17-29% when accounting for decomposition while in transit across the shelf. This is substantially more than initial global estimates. Because DSWT occurs in many mid-latitude locations around the world, where kelp forests are also most productive, export of kelp carbon from the coast could be considerably larger than initially expected.

Role of Syndiniales parasites in depth-specific networks and carbon flux in the oligotrophic ocean

Microbial associations that result in phytoplankton mortality are important for carbon transport in the ocean. This includes parasitism, which in microbial food webs is dominated by the marine alveolate group, Syndiniales. Parasites are expected to contribute to carbon recycling via host lysis; however, knowledge on host dynamics and correlation to carbon export remain unclear and limit the inclusion of parasitism in biogeochemical models. We analyzed a 4-year 18S rRNA gene metabarcoding dataset (2016-19), performing network analysis for 12 discrete depths (1-1000 m) to determine Syndiniales-host associations in the seasonally oligotrophic Sargasso Sea. Analogous water column and sediment trap data were included to define environmental drivers of Syndiniales and their correlation with particulate carbon flux (150 m). Syndiniales accounted for 48-74% of network edges, most often associated with Dinophyceae and Arthropoda (mainly copepods) at the surface and Rhizaria (Polycystinea, Acantharea, and RAD-B) in the aphotic zone. Syndiniales were the only eukaryote group to be significantly (and negatively) correlated with particulate carbon flux, indicating their contribution to flux attenuation via remineralization. Examination of Syndiniales amplicons revealed a range of depth patterns, including specific ecological niches and vertical connection among a subset (19%) of the community, the latter implying sinking of parasites (infected hosts or spores) on particles. Our findings elevate the critical role of Syndiniales in marine microbial systems and reveal their potential use as biomarkers for carbon export.

Biological carbon pump estimate based on multidecadal hydrographic data

The transfer of photosynthetically produced organic carbon from surface to mesopelagic waters draws carbon dioxide from the atmosphere1. However, current observation-based estimates disagree on the strength of this biological carbon pump (BCP)2. Earth system models (ESMs) also exhibit a large spread of BCP estimates, indicating limited representations of the known carbon export pathways3. Here we use several decades of hydrographic observations to produce a top-down estimate of the strength of the BCP with an inverse biogeochemical model that implicitly accounts for all known export pathways. Our estimate of total organic carbon (TOC) export at 73.4 m (model euphotic zone depth) is 15.00 ± 1.12 Pg C year-1, with only two-thirds reaching 100 m depth owing to rapid remineralization of organic matter in the upper water column. Partitioned by sequestration time below the euphotic zone, τ, the globally integrated organic carbon production rate with τ > 3 months is 11.09 ± 1.02 Pg C year-1, dropping to 8.25 ± 0.30 Pg C year-1 for τ > 1 year, with 81% contributed by the non-advective-diffusive vertical flux owing to sinking particles and vertically migrating zooplankton. Nevertheless, export of organic carbon by mixing and other fluid transport of dissolved matter and suspended particles remains regionally important for meeting the respiratory carbon demand. Furthermore, the temperature dependence of the sequestration efficiency inferred from our inversion suggests that future global warming may intensify the recycling of organic matter in the upper ocean, potentially weakening the BCP.

Carbon sequestration and climate change mitigation using macroalgae: a state of knowledge review

The conservation, restoration, and improved management of terrestrial forests significantly contributes to mitigate climate change and its impacts, as well as providing numerous co-benefits. The pressing need to reduce emissions and increase carbon removal from the atmosphere is now also leading to the development of natural climate solutions in the ocean. Interest in the carbon sequestration potential of underwater macroalgal forests is growing rapidly among policy, conservation, and corporate sectors. Yet, our understanding of whether carbon sequestration from macroalgal forests can lead to tangible climate change mitigation remains severely limited, hampering their inclusion in international policy or carbon finance frameworks. Here, we examine the results of over 180 publications to synthesise evidence regarding macroalgal forest carbon sequestration potential. We show that research efforts on macroalgae carbon sequestration are heavily skewed towards particulate organic carbon (POC) pathways (77% of data publications), and that carbon fixation is the most studied flux (55%). Fluxes leading directly to carbon sequestration (e.g. carbon export or burial in marine sediments) remain poorly resolved, likely hindering regional or country-level assessments of carbon sequestration potential, which are only available from 17 of the 150 countries where macroalgal forests occur. To solve this issue, we present a framework to categorize coastlines according to their carbon sequestration potential. Finally, we review the multiple avenues through which this sequestration can translate into climate change mitigation capacity, which largely depends on whether management interventions can increase carbon removal above a natural baseline or avoid further carbon emissions. We find that conservation, restoration and afforestation interventions on macroalgal forests can potentially lead to carbon removal in the order of 10's of Tg C globally. Although this is lower than current estimates of natural sequestration value of all macroalgal habitats (61-268 Tg C year-1 ), it suggests that macroalgal forests could add to the total mitigation potential of coastal blue carbon ecosystems, and offer valuable mitigation opportunities in polar and temperate areas where blue carbon mitigation is currently low. Operationalizing that potential will necessitate the development of models that reliably estimate the proportion of production sequestered, improvements in macroalgae carbon fingerprinting techniques, and a rethinking of carbon accounting methodologies. The ocean provides major opportunities to mitigate and adapt to climate change, and the largest coastal vegetated habitat on Earth should not be ignored simply because it does not fit into existing frameworks.

Chasing iron bioavailability in the Southern Ocean: Insights from Phaeocystis antarctica and iron speciation

Dissolved iron (dFe) availability limits the uptake of atmospheric CO₂ by the Southern Ocean (SO) biological pump. Hence, any change in bioavailable dFe in this region can directly influence climate. On the basis of Fe uptake experiments with Phaeocystis antarctica, we show that the range of dFe bioavailability in natural samples is wider (<1 to ~200% compared to free inorganic Fe') than previously thought, with higher bioavailability found near glacial sources. The degree of bioavailability varied regardless of in situ dFe concentration and depth, challenging the consensus that sole dFe concentrations can be used to predict Fe uptake in modeling studies. Further, our data suggest a disproportionately major role of biologically mediated ligands and encourage revisiting the role of humic substances in influencing marine Fe biogeochemical cycling in the SO. Last, we describe a linkage between in situ dFe bioavailability and isotopic signatures that, we anticipate, will stimulate future research.

Krill body size drives particulate organic carbon export in West Antarctica

The export of carbon from the ocean surface and storage in the ocean interior is important in the modulation of global climate^1-4. The West Antarctic Peninsula experiences some of the largest summer particulate organic carbon (POC) export rates, and one of the fastest warming rates, in the world^5,6. To understand how warming may alter carbon storage, it is necessary to first determine the patterns and ecological drivers of POC export^7,8. Here we show that Antarctic krill (Euphausia superba) body size and life-history cycle, as opposed to their overall biomass or regional environmental factors, exert the dominant control on the POC flux. We measured POC fluxes over 21 years, the longest record in the Southern Ocean, and found a significant 5-year periodicity in the annual POC flux, which oscillated in synchrony with krill body size, peaking when the krill population was composed predominately of large individuals. Krill body size alters the POC flux through the production and export of size-varying faecal pellets⁹, which dominate the total flux. Decreases in winter sea ice¹⁰, an essential habitat for krill, are causing shifts in the krill population¹¹, which may alter these export patterns of faecal pellets, leading to changes in ocean carbon storage.