Applying Movement Ecology to Marine Animals with Complex Life Cycles

The role of photobehaviour in sponge larval dispersal and settlement

Deciphering the behavioural ecology of adult (sessile) sponges is challenging. However, their motile larval stages afford opportunities to investigate how behaviour contributes to dispersal and selection of habitat. Light is a fundamental cue contributing to larval sponge dispersal where photoreceptive cells contribute to this process. But how universal is light as a cue to sponge larval dispersal and settlement? Behavioural choice experiments were used to test the effect of light on dispersal and settlement behaviours. Larvae of the tropical sponge species Coscinoderma mathewsi, Luffariella variabilis, Ircinia microconnulosa, and Haliclona sp., from deep (12-15 m) and shallower-water habitats (2-5 m), were used in experiments. Dispersal experiments provided a light-gradient-choice where light represented light attenuation with depth. Light treatments included white light and the spectral components of red and blue light. Settlement experiments comprised a choice between illuminated and shaded treatments. Fluorescence microscopy was used to establish the presence of fluorescent proteins associated with posterior locomotory cilia. Deeper-water species, C. mathewsi and I. microconnulosa discriminate light spectral signatures. Both species changed dispersal behaviour to light spectra as larvae aged. For C. mathewsi positive phototaxis to blue light changed to photophobic responses (all light treatments) after six hours and behaviours in I. microconnulosa changed from positive to negative phototaxis (white light) after six hours. L. variabilis, also a deeper-water species, was negatively phototactic to all light treatments. Larvae from the shallow-water species, Haliclona sp., moved towards all light wavelengths tested. There was no effect of light on settlement of the shallow-water Haliclona sp., but larvae in all three deeper-water species showed significantly higher settlement in shaded treatments. Fluorescence microscopy showed discrete fluorescent bands contiguous to posterior tufted cilia in all four species. These fluorescent bands may play a contributory role in larval photobehaviour.

Intermittent and temporally variable bioturbation by some terrestrial invertebrates: implications for ichnology

Bedding planes and vertical sections of many sedimentary rock formations reveal bioturbation structures, including burrows, produced by diverse animal taxa at different rates and durations. These variables are not directly measurable in the fossil record, but neoichnological observations and experiments provide informative analogues. Comparable to marine invertebrates from many phyla, a captive beetle larva burrowing over 2 weeks showed high rates of sediment disturbance within the first 100 h but slower rates afterwards. Tunnelling by earthworms and adult dung beetles is also inconstant-displacement of lithic material alternates with organic matter displacement, often driven by food availability with more locomotion when hungry. High rates of bioturbation, as with locomotion generally, result from internal and external drives, slowing down or stopping when needs are filled. Like other processes affecting sediment deposition and erosion, rates can drastically differ based on measured timescale, with short bursts of activity followed by hiatuses, concentrated in various seasons and ontogenetic stages for particular species. Assumptions of constant velocities within movement paths, left as traces afterward, may not apply in many cases. Arguments about energetic efficiency or optimal foraging based on ichnofossils have often overlooked these and related issues. Single bioturbation rates from short-term experiments in captivity may not be comparable to rates measured at an ecosystem level over a year or generalized across multiple time scales where conditions differ even for the same species. Neoichnological work, with an understanding of lifetime variabilities in bioturbation and their drivers, helps connect ichnology with behavioural biology and movement ecology.

Emigration patterns of motile cryptofauna and their implications for trophic functioning in coral reefs

Patterns of movement of marine species can reflect strategies of reproduction and dispersal, species' interactions, trophodynamics, and susceptibility to change, and thus critically inform how we manage populations and ecosystems. On coral reefs, the density and diversity of metazoan taxa are greatest in dead coral and rubble, which are suggested to fuel food webs from the bottom up. Yet, biomass and secondary productivity in rubble is predominantly available in some of the smallest individuals, limiting how accessible this energy is to higher trophic levels. We address the bioavailability of motile coral reef cryptofauna based on small-scale patterns of emigration in rubble. We deployed modified RUbble Biodiversity Samplers (RUBS) and emergence traps in a shallow rubble patch at Heron Island, Great Barrier Reef, to detect community-level differences in the directional influx of motile cryptofauna under five habitat accessibility regimes. The mean density (0.13-4.5 ind cm^-3) and biomass (0.14-5.2 mg cm^-3) of cryptofauna were high and varied depending on microhabitat accessibility. Emergent zooplankton represented a distinct community (dominated by the Appendicularia and Calanoida) with the lowest density and biomass, indicating constraints on nocturnal resource availability. Mean cryptofauna density and biomass were greatest when interstitial access within rubble was blocked, driven by the rapid proliferation of small harpacticoid copepods from the rubble surface, leading to trophic simplification. Individuals with high biomass (e.g., decapods, gobies, and echinoderms) were greatest when interstitial access within rubble was unrestricted. Treatments with a closed rubble surface did not differ from those completely open, suggesting that top-down predation does not diminish rubble-derived resources. Our results show that conspecific cues and species' interactions (e.g., competition and predation) within rubble are most critical in shaping ecological outcomes within the cryptobiome. These findings have implications for prey accessibility through trophic and community size structuring in rubble, which may become increasingly relevant as benthic reef complexity shifts in the Anthropocene.

Biological effects on the migration and transformation of microplastics in the marine environment

Microplastics(MPs) are ubiquitous, difficult to degrade, and potentially threatening to organisms in marine environment, so it is important to clarify the factors that affect their biogeochemical processes. The impact of biological activities on the MPs in marine environment is ubiquitous and complex, and there is currently a lack of systematic summaries. This paper reviews the effects of biological actions on the migration, distribution and degradation of MPs in marine environment from four aspects: biological ingestion and digestion, biological movement, biological colonization and biological adhesion. MPs in seawater and sediments can be closely combined with organisms through three pathways: biological ingestion, biofilm formation or adhesion to organisms, and are passed between species at different trophic levels through the food chain. The generation and degradation of faecal pellets and biofilms can alter the density of "environmental MPs", thereby affecting their vertical migration and deposition in water bodies. The movement of swimming organisms and the disturbance by benthic organisms can promote the migration of MPs in water and vertical migration and resuspension in sediments, thereby changing the distribution of MPs in local sea areas. The grinding effect of the digestive tract and the secretion of chemicals from the biofilm (such as enzymes and acids) can reduce the particle size and increase surface roughness of MPs, or even degrade them completely. Besides, biological adhesion may be an important mechanism affecting the distribution, migration and preservation of MPs. There may be complex interactions and linkages among marine dynamical processes, photochemical degradation and biological processes that collectively affect the biogeochemical processes of MPs, but their relative contributions remain to be more studied.

Intrapopulation differences in polar bear movement and step selection patterns

BACKGROUND

The spatial ecology of individuals often varies within a population or species. Identifying how individuals in different classes interact with their environment can lead to a better understanding of population responses to human activities and environmental change and improve population estimates. Most inferences about polar bear (Ursus maritimus) spatial ecology are based on data from adult females due to morphological constraints on applying satellite radio collars to other classes of bears. Recent studies, however, have provided limited movement data for adult males and sub-adults of both sexes using ear-mounted and glue-on tags. We evaluated class-specific movements and step selection patterns for polar bears in the Chukchi Sea subpopulation during spring.

METHODS

We developed hierarchical Bayesian models to evaluate polar bear movement (i.e., step length and directional persistence) and step selection at the scale of 4-day step lengths. We assessed differences in movement and step selection parameters among the three classes of polar bears (i.e., adult males, sub-adults, and adult females without cubs-of-the-year).

RESULTS

Adult males had larger step lengths and less directed movements than adult females. Sub-adult movement parameters did not differ from the other classes but point estimates were most similar to adult females. We did not detect differences among polar bear classes in step selection parameters and parameter estimates were consistent with previous studies.

CONCLUSIONS

Our findings support the use of estimated step selection patterns from adult females as a proxy for other classes of polar bears during spring. Conversely, movement analyses indicated that using data from adult females as a proxy for the movements of adult males is likely inappropriate. We recommend that researchers consider whether it is valid to extend inference derived from adult female movements to other classes, based on the questions being asked and the spatial and temporal scope of the data. Because our data were specific to spring, these findings highlight the need to evaluate differences in movement and step selection during other periods of the year, for which data from ear-mounted and glue-on tags are currently lacking.

Five hundred million years to mobility: directed locomotion and its ecological function in a turtle barnacle

Movement is a fundamental characteristic of life, yet some invertebrate taxa, such as barnacles, permanently affix to a substratum as adults. Adult barnacles became 'sessile' over 500 Ma; however, we confirm that the epizoic sea turtle barnacle, Chelonibia testudinaria, has evolved the capacity for self-directed locomotion as adults. We also assess how these movements are affected by water currents and the distance between conspecifics. Finally, we microscopically examine the barnacle cement. Chelonibia testudinaria moved distances up to 78.6 mm yr-1 on loggerhead and green sea turtle hosts. Movements on live hosts and on acrylic panels occasionally involved abrupt course alterations of up to 90°. Our findings showed that barnacles tended to move directly against water flow and independent of nearby conspecifics. This suggests that these movements are not passively driven by external forces and instead are behaviourally directed. In addition, it indicates that these movements function primarily to facilitate feeding, not reproduction. While the mechanism enabling movement remained elusive, we observed that trails of cement bore signs of multi-layered, episodic secretion. We speculate that proximal causes of movement involve one or a combination of rapid shell growth, cement secretion coordinated with basal membrane lifting, and directed contraction of basal perimeter muscles.

Machine Learning Applications of Convolutional Neural Networks and Unet Architecture to Predict and Classify Demosponge Behavior

Biological data sets are increasingly becoming information-dense, making it effective to use a computer science-based analysis. We used convolution neural networks (CNN) and the specific CNN architecture Unet to study sponge behavior over time. We analyzed a large time series of hourly high-resolution still images of a marine sponge, Suberites concinnus (Demospongiae, Suberitidae) captured between 2012 and 2015 using the NEPTUNE seafloor cabled observatory, off the west coast of Vancouver Island, Canada. We applied semantic segmentation with the Unet architecture with some modifications, including adapting parts of the architecture to be more applicable to three-channel images (RGB). Some alterations that made this model successful were the use of a dice-loss coefficient, Adam optimizer and a dropout function after each convolutional layer which provided losses, accuracies and dice scores of up to 0.03, 0.98 and 0.97, respectively. The model was tested with five-fold cross-validation. This study is a first step towards analyzing trends in the behavior of a demosponge in an environment that experiences severe seasonal and inter-annual changes in climate. The end objective is to correlate changes in sponge size (activity) over seasons and years with environmental variables collected from the same observatory platform. Our work provides a roadmap for others who seek to cross the interdisciplinary boundaries between biology and computer science.

Colonization of novel algal habitats by juveniles of a marine tube-dwelling amphipod

Background

Dispersal is an important process affecting population dynamics and connectivity. For marine direct developers, both adults and juveniles may disperse. Although the distribution of juveniles can be initially constrained by their mothers’ choice, they may be able to leave the parental habitat and colonize other habitats. We investigated the effect of habitat quality, patch size and presence of conspecific adults on the colonization of novel habitats by juveniles of the tube-dwelling amphipod Cymadusa filosa associated with the macroalgal host Sargassum filipendula.

Methods

We tested the factors listed above on the colonization of juveniles by manipulating natural and artificial plants in both the field and laboratory.

Results

In the laboratory, juveniles selected high-quality habitats (i.e., natural alga), where both food and shelter are provided, when low-quality resources (i.e., artificial alga) were also available. In contrast, habitat quality and algal patch size did not affect the colonization by juveniles in the field. Finally, the presence of conspecific adults did not affect the colonization of juveniles under laboratory condition but had a weak effect in the field experiment. Our results suggest that C. filosa juveniles can select and colonize novel habitats, and that such process can be partially affected by habitat quality, but not by patch size. Also, the presence of conspecifics may affect the colonization by juveniles. Successful colonization by this specific developmental stage under different scenarios indicates that juveniles may act as a dispersal agent in this species.

Ocean currents and the population genetic signature of fish migrations

Animal migrations are a fascinating and global phenomenon, yet they are often difficult to study and sometimes poorly understood. Here, we build on classic ecological theory by hypothesizing that some enigmatic spawning migrations across coastal marine habitats can be inferred from the population genetic signature of larval dispersal by ocean currents. We test this assumption by integrating spatially realistic simulations of alternative spawning migration routes, associated patterns of larval dispersal, and associated variation in the population genetic structure of eastern Australian sea mullet (Mugil cephalus). We then use simulation results to assess the implications of alternative spawning destinations for larval replenishment, and we contrast simulated against measured population genetic variation. Both analyses suggest that the spawning migrations of M. cephalus in eastern Australia are likely to be localized (approximately 100 km along the shore), and that spawning is likely to occur in inshore waters. Our conclusions are supported by multiple lines of evidence available through independent studies, but they challenge the more traditional assumption of a single, long-distance migration event with subsequent offshore spawning in the East Australian Current. More generally, our study operationalizes classic theory on the relationship between fish migrations, ocean currents, and reproductive success. However, rather than confirming the traditionally assumed adaptation of migratory behavior to dominant ocean current flow, our findings support the concept of a genetically measurable link between fish migrations and local oceanographic conditions, specifically water temperature and coastal retention of larvae. We believe that future studies using similar approaches for high resolution and spatially realistic ecological-genetic scenario testing can help rapidly advance our understanding of key ecological processes in many other marine species.

Climate-Driven Shifts in Marine Species Ranges: Scaling from Organisms to Communities

The geographic distributions of marine species are changing rapidly, with leading range edges following climate poleward, deeper, and in other directions and trailing range edges often contracting in similar directions. These shifts have their roots in fine-scale interactions between organisms and their environment-including mosaics and gradients of temperature and oxygen-mediated by physiology, behavior, evolution, dispersal, and species interactions. These shifts reassemble food webs and can have dramatic consequences. Compared with species on land, marine species are more sensitive to changing climate but have a greater capacity for colonization. These differences suggest that species cope with climate change at different spatial scales in the two realms and that range shifts across wide spatial scales are a key mechanism at sea. Additional research is needed to understand how processes interact to promote or constrain range shifts, how the dominant responses vary among species, and how the emergent communities of the future ocean will function.

Motion in the ocean-Paradigm shift in movement ecology requires "sedentary" organisms to be redefined

In Focus: Hamel, J.-F., Sun, J., Gianasi, B. L., et al. (2019). Active buoyancy adjustment increases dispersal potential in benthic marine animals. Journal of Animal Ecology. https://doi.org/10.1111/1365-2656.12943 Effective ecosystem-based fisheries and conservation management relies on the accuracy of population structure and connectivity models. The majority of sedentary marine species are pelago-benthic, meaning the pelagic larval stages disperse using ocean currents, and the adults are stationary or crawl slowly over the seabed. Adult movement was, until recently, thought to be insignificant due to the limited spatial range. In this issue, a novel method of translocation for adults that may far exceed the dispersion capability of the juveniles is presented, providing evidence for important effects of adult dispersal. Active buoyancy adjustment (ABA) is a behavioural response to environmental stressors or water currents that enables echinoderm Asteroidea (sea stars) and Holothuroidea (sea cucumbers) to efficiently relocate. Adult relocation using tides could explain mass spawning aggregations that increase population and individual fitness, and less advantageous mass stranding events. Implications of ABA for future marine management and policy are discussed.

Potential impacts of the invasive species Corbicula fluminea on the survival of glochidia

Freshwater mussels (Bivalvia, Unionida) are one of the most imperilled faunal groups globally, being the introduction of invasive species a possible major mechanism of threat. The Asian clam Corbicula fluminea is a problematic invasive species in aquatic ecosystems and can impair the survival of parasitic larvae (glochidia) of native freshwater mussels. However, this possible mechanism of threat remains speculative and to date very few studies addressed quantitatively this issue. In order to cover this gap, we have performed a series of manipulative laboratory studies to assess how distinct densities of C. fluminea can affect the survival of glochidia after 6, 12, 24 and 48 h of exposure, using larvae of the native freshwater mussel Anodonta anatina. Our results suggest an increase in mortality of A. anatina glochidia with an increase in density of C. fluminea. Two main mechanisms may possibly explain our results: 1) the high filtration capacity of C. fluminea that can contribute to the mortality of glochidia due to the mechanical damage of their fragile shells when passing by siphons and/or digestive tract of C. fluminea and 2) the high excretion capacity of C. fluminea that can lead to mortality of glochidia due to increase in ammonia concentration. Mortality of glochidia was also time dependent with higher values registered after 48 h. This work is one of the first showing the influence of C. fluminea density on the survival of glochidia, being filtration (and consequent passage in the digestive tract) and biodeposition the main potential mechanisms explaining overall mortality. These results also suggest that sites with high densities of C. fluminea may be highly detrimental for the conservation of freshwater mussels, potentially impairing the survival of glochidia and negatively affecting the recruitment of juveniles.

Arms of larval seastars of Pisaster ochraceus provide versatility in muscular and ciliary swimming

Larval swimming with cilia, unaided by muscles, is the presumed ancestral condition for echinoderms, but use of muscles in swimming has evolved several times. Ciliation and musculature of the arms of brachiolaria-stage larvae in the family Asteriidae provide unusual versatility in the use of muscles in swimming. The muscles affect swimming in two different ways. (1) Contraction of muscles moves the arms, propelling the larva. (2) Contraction of muscles changes orientation of the arms, thereby changing direction of ciliary currents and direction of swimming. New observations of the brachiolaria of the asteriid seastar Pisaster ochraceus demonstrate more versatility in both of these uses of muscles than had been previously described: the posterolateral arms stroke in more ways to propel the larva forward and to change the direction of swimming, and more pairs of the arms point ciliary currents in more directions for changes in direction of swimming. Morphology of brachiolariae suggests that these uses of muscles in swimming evolved before divergence of the families Stichasteridae and Asteriidae within forcipulate asteroids. This versatile use of muscles for swimming, both alone and in combination with ciliary currents, further distinguishes the swimming of these brachiolariae from swimming by larvae of other echinoderms and larvae of acorn worms in the sister phylum Hemichordata.

Active buoyancy adjustment increases dispersal potential in benthic marine animals

While the study of dispersal and connectivity in the ocean typically centres on pelagic species and planktonic larval stages of benthic species, the present work explores an overlooked locomotor means in post‐settlement benthic stages that redefines their dispersal potential.

Members of the echinoderm class Holothuroidea colonize a diversity of marine environments world‐wide, where they play key ecological and economical roles, making their conservation a priority. Holothuroids are commonly called sea cucumbers or sea slugs to reflect their slow movements and are assumed to disperse chiefly through pelagic larvae.

The present study documents and explores their unexpected ability to actively modify their buoyancy, leading them to tumble or float at speeds orders of magnitudes faster than through benthic crawling. Two focal species representing different taxonomic orders, geographic distributions and reproductive strategies were studied over several years.

Active buoyancy adjustment (ABA) was achieved through a rapid increase in water‐to‐flesh ratio by up to 740%, leading to bloating, and simultaneously detachment from the substrate. It occurred as early as 6 months post settlement in juveniles and was recorded in wild adult populations. In experimental trials, ABA was triggered by high conspecific density, decreasing salinity and increasing water turbidity. Based on field video footage, ABA‐assisted movements generated speeds of up to 90 km/day.

These findings imply that displacement during planktonic larval stages may not supersede the locomotor capacity of benthic stages, challenging the notion of sedentarity. Combining the present results and anecdotal reports, ABA emerges as a generalized means of dispersal among benthic animals, with critical implications for world‐wide management and conservation of commercially and ecologically significant species.

Search and foraging behaviors from movement data: A comparison of methods

Search behavior is often used as a proxy for foraging effort within studies of animal movement, despite it being only one part of the foraging process, which also includes prey capture. While methods for validating prey capture exist, many studies rely solely on behavioral annotation of animal movement data to identify search and infer prey capture attempts. However, the degree to which search correlates with prey capture is largely untested. This study applied seven behavioral annotation methods to identify search behavior from GPS tracks of northern gannets (Morus bassanus), and compared outputs to the occurrence of dives recorded by simultaneously deployed time-depth recorders. We tested how behavioral annotation methods vary in their ability to identify search behavior leading to dive events. There was considerable variation in the number of dives occurring within search areas across methods. Hidden Markov models proved to be the most successful, with 81% of all dives occurring within areas identified as search. k-Means clustering and first passage time had the highest rates of dives occurring outside identified search behavior. First passage time and hidden Markov models had the lowest rates of false positives, identifying fewer search areas with no dives. All behavioral annotation methods had advantages and drawbacks in terms of the complexity of analysis and ability to reflect prey capture events while minimizing the number of false positives and false negatives. We used these results, with consideration of analytical difficulty, to provide advice on the most appropriate methods for use where prey capture behavior is not available. This study highlights a need to critically assess and carefully choose a behavioral annotation method suitable for the research question being addressed, or resulting species management frameworks established.