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For: Zhao Z, Liu H, Wang C, Xu JR. Comparative analysis of fungal genomes reveals different plant cell wall degrading capacity in fungi. BMC Genomics 2013;14:274. [PMID: 23617724 PMCID: PMC3652786 DOI: 10.1186/1471-2164-14-274] [Citation(s) in RCA: 304] [Impact Index Per Article: 27.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/03/2012] [Accepted: 04/17/2013] [Indexed: 02/06/2023]  Open
Number Cited by Other Article(s)
1
Khodadadi F, Luciano-Rosario D, Gottschalk C, Jurick WM, Aćimović SG. Unveiling the Arsenal of Apple Bitter Rot Fungi: Comparative Genomics Identifies Candidate Effectors, CAZymes, and Biosynthetic Gene Clusters in Colletotrichum Species. J Fungi (Basel) 2024;10:493. [PMID: 39057378 PMCID: PMC11278308 DOI: 10.3390/jof10070493] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2024] [Revised: 07/05/2024] [Accepted: 07/09/2024] [Indexed: 07/28/2024]  Open
2
Ribeiro Tomé LM, Quintanilha-Peixoto G, Costa-Rezende DH, Salvador-Montoya CA, Cardoso D, S Araújo D, Freitas JM, Bielefeld Nardoto G, Alves-Silva G, Drechsler-Santos ER, Góes-Neto A. Comparative genomics and stable isotope analysis reveal the saprotrophic-pathogenic lifestyle of a neotropical fungus. mBio 2024:e0142324. [PMID: 39012152 DOI: 10.1128/mbio.01423-24] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2024] [Accepted: 06/20/2024] [Indexed: 07/17/2024]  Open
3
Díaz-Tapia KM, Zavala-Páramo MG, Villa-Rivera MG, Morelos-Martínez MI, López-Romero E, Simpson J, Bolaños-Rebolledo J, Cano-Camacho H. Differential Carbon Catabolite Repression and Hemicellulolytic Ability among Pathotypes of Colletotrichum lindemuthianum against Natural Plant Substrates. J Fungi (Basel) 2024;10:406. [PMID: 38921392 PMCID: PMC11204554 DOI: 10.3390/jof10060406] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2024] [Revised: 05/31/2024] [Accepted: 06/03/2024] [Indexed: 06/27/2024]  Open
4
Zhan S, Wu W, Hu J, Liu F, Qiao X, Chen L, Zhou Y. The pathogenicity and regulatory function of temperature-sensitive proteins PscTSP in Pseudofabraea citricarpa under high temperature stress. Int J Biol Macromol 2024;270:132017. [PMID: 38697438 DOI: 10.1016/j.ijbiomac.2024.132017] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/27/2024] [Revised: 04/28/2024] [Accepted: 04/29/2024] [Indexed: 05/05/2024]
5
Du S, Wang L, Yang H, Zhang Q. Tree phylogeny predicts more than litter chemical components in explaining enzyme activities in forest leaf litter decomposition. Microbiol Res 2024;283:127658. [PMID: 38457993 DOI: 10.1016/j.micres.2024.127658] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2023] [Revised: 02/15/2024] [Accepted: 02/18/2024] [Indexed: 03/10/2024]
6
Baranda P, Islam S, Modi A, Mistry H, Al Obaid S, Ansari MJ, Yadav VK, Patel A, Joshi M, Sahoo DK, Bariya H. Whole-genome sequencing of marine water-derived Curvularia verruculosa KHW-7: a pioneering study. Front Microbiol 2024;15:1363879. [PMID: 38846574 PMCID: PMC11155457 DOI: 10.3389/fmicb.2024.1363879] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2023] [Accepted: 05/06/2024] [Indexed: 06/09/2024]  Open
7
Ruan Z, Jiao J, Zhao J, Liu J, Liang C, Yang X, Sun Y, Tang G, Li P. Genome sequencing and comparative genomics reveal insights into pathogenicity and evolution of Fusarium zanthoxyli, the causal agent of stem canker in prickly ash. BMC Genomics 2024;25:502. [PMID: 38773367 PMCID: PMC11110190 DOI: 10.1186/s12864-024-10424-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2024] [Accepted: 05/16/2024] [Indexed: 05/23/2024]  Open
8
Gu X, Cao Z, Li Z, Yu H, Liu W. Plant immunity suppression by an β-1,3-glucanase of the maize anthracnose pathogen Colletotrichum graminicola. BMC PLANT BIOLOGY 2024;24:339. [PMID: 38671375 PMCID: PMC11046878 DOI: 10.1186/s12870-024-05053-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/25/2024] [Accepted: 04/19/2024] [Indexed: 04/28/2024]
9
Romero G, González S, Royero W, González A. Morphological and transcriptional analysis of Colletotrichum lindemuthianum race 7 during early stages of infection in common bean. Genet Mol Biol 2024;47:e20220263. [PMID: 38593425 PMCID: PMC11003654 DOI: 10.1590/1678-4685-gmb-2022-0263] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2023] [Accepted: 01/26/2024] [Indexed: 04/11/2024]  Open
10
Bradley JM, Butlin RK, Scholes JD. Comparative secretome analysis of Striga and Cuscuta species identifies candidate virulence factors for two evolutionarily independent parasitic plant lineages. BMC PLANT BIOLOGY 2024;24:251. [PMID: 38582844 PMCID: PMC10998327 DOI: 10.1186/s12870-024-04935-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/21/2023] [Accepted: 03/20/2024] [Indexed: 04/08/2024]
11
Hallas-Mølle M, Burow M, Henrissat B, Johansen KS. Cryptococcus neoformans: plant-microbe interactions and ecology. Trends Microbiol 2024:S0966-842X(24)00059-3. [PMID: 38519353 DOI: 10.1016/j.tim.2024.03.002] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/23/2024] [Revised: 02/28/2024] [Accepted: 03/01/2024] [Indexed: 03/24/2024]
12
Li Q, Feng Y, Li J, Hai Y, Si L, Tan C, Peng J, Hu Z, Li Z, Li C, Hao D, Tang W. Multi-omics approaches to understand pathogenicity during potato early blight disease caused by Alternaria solani. Front Microbiol 2024;15:1357579. [PMID: 38529180 PMCID: PMC10961351 DOI: 10.3389/fmicb.2024.1357579] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/18/2023] [Accepted: 02/14/2024] [Indexed: 03/27/2024]  Open
13
Wang X, Wei J, Liu Z, Wang Y, Yuan X, Wang D, Niu J, Yang Y, Zhou J. Comparative genomic analysis of Sanghuangporus sanghuang with other Hymenochaetaceae species. Braz J Microbiol 2024;55:87-100. [PMID: 38099978 PMCID: PMC10920484 DOI: 10.1007/s42770-023-01212-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Accepted: 12/03/2023] [Indexed: 03/09/2024]  Open
14
Varrella S, Barone G, Corinaldesi C, Giorgetti A, Nomaki H, Nunoura T, Rastelli E, Tangherlini M, Danovaro R, Dell’Anno A. Fungal Abundance and Diversity in the Mariana Trench, the Deepest Ecosystem on Earth. J Fungi (Basel) 2024;10:73. [PMID: 38248982 PMCID: PMC10820024 DOI: 10.3390/jof10010073] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/21/2023] [Revised: 01/09/2024] [Accepted: 01/10/2024] [Indexed: 01/23/2024]  Open
15
Datta R. Enzymatic degradation of cellulose in soil: A review. Heliyon 2024;10:e24022. [PMID: 38234915 PMCID: PMC10792583 DOI: 10.1016/j.heliyon.2024.e24022] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2022] [Revised: 12/13/2023] [Accepted: 01/02/2024] [Indexed: 01/19/2024]  Open
16
Cheng H, Zhou X, Yang Y, Xu L, Ding Y, Yan T, Li Q. Environmental damages, cumulative exergy demand, and economic assessment of Panus giganteus farming with the application of solar technology. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024;907:168020. [PMID: 37898217 DOI: 10.1016/j.scitotenv.2023.168020] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2023] [Revised: 10/06/2023] [Accepted: 10/20/2023] [Indexed: 10/30/2023]
17
Scott CJR, Leadbeater DR, Oates NC, James SR, Newling K, Li Y, McGregor NGS, Bird S, Bruce NC. Whole genome structural predictions reveal hidden diversity in putative oxidative enzymes of the lignocellulose-degrading ascomycete Parascedosporium putredinis NO1. Microbiol Spectr 2023;11:e0103523. [PMID: 37811978 PMCID: PMC10714830 DOI: 10.1128/spectrum.01035-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2023] [Accepted: 08/22/2023] [Indexed: 10/10/2023]  Open
18
Gutiérrez-Sánchez A, Plasencia J, Monribot-Villanueva JL, Rodríguez-Haas B, Ruíz-May E, Guerrero-Analco JA, Sánchez-Rangel D. Virulence factors of the genus Fusarium with targets in plants. Microbiol Res 2023;277:127506. [PMID: 37783182 DOI: 10.1016/j.micres.2023.127506] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2023] [Revised: 09/21/2023] [Accepted: 09/21/2023] [Indexed: 10/04/2023]
19
Yu J, Kong L, Fan S, Li M, Li J. Genomic Characterization of the Mycoparasite Pestalotiopsis sp. Strain cr013 from Cronartium ribicola. Pol J Microbiol 2023;72:433-442. [PMID: 38095159 PMCID: PMC10725163 DOI: 10.33073/pjm-2023-041] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/17/2023] [Accepted: 10/24/2023] [Indexed: 12/17/2023]  Open
20
Li J, Zhang D, Du Y, Song J, Li R, Dai X, Chen J, Li G, Liu Z. Genome Sequence Resource of Cladosporium velox Strain C4 Causing Cotton Boll Disease in Xinjiang, China. PLANT DISEASE 2023;107:4010-4015. [PMID: 37368501 DOI: 10.1094/pdis-11-22-2694-a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/29/2023]
21
Ökmen B, Katzy P, Huang L, Wemhöner R, Doehlemann G. A conserved extracellular Ribo1 with broad-spectrum cytotoxic activity enables smut fungi to compete with host-associated bacteria. THE NEW PHYTOLOGIST 2023;240:1976-1989. [PMID: 37680042 DOI: 10.1111/nph.19244] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2023] [Accepted: 08/14/2023] [Indexed: 09/09/2023]
22
Rocha VDD, Dal'Sasso TCDS, Dal-Bianco M, Oliveira LOD. Genome-wide survey and evolutionary history of the pectin methylesterase (PME) gene family in the Dothideomycetes class of fungi. Fungal Genet Biol 2023;169:103841. [PMID: 37797717 DOI: 10.1016/j.fgb.2023.103841] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2023] [Revised: 09/06/2023] [Accepted: 10/03/2023] [Indexed: 10/07/2023]
23
Gurjar MS, Kumar TPJ, Shakouka MA, Saharan MS, Rawat L, Aggarwal R. Draft genome sequencing of Tilletia caries inciting common bunt of wheat provides pathogenicity-related genes. Front Microbiol 2023;14:1283613. [PMID: 38033590 PMCID: PMC10684912 DOI: 10.3389/fmicb.2023.1283613] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/26/2023] [Accepted: 10/05/2023] [Indexed: 12/02/2023]  Open
24
Chen X, Zou Y, Li Q, Wu C, Zhou P, Chen Z, Shi J, Zhao Z. Effect of Thermophilic Microbial Agents on Crude Fiber Content, Carbohydrate-Active Enzyme Genes, and Microbial Communities during Chinese Medicine Residue Composting. ACS OMEGA 2023;8:39570-39582. [PMID: 37901486 PMCID: PMC10600912 DOI: 10.1021/acsomega.3c05442] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/26/2023] [Accepted: 09/06/2023] [Indexed: 10/31/2023]
25
Dort EN, Layne E, Feau N, Butyaev A, Henrissat B, Martin FM, Haridas S, Salamov A, Grigoriev IV, Blanchette M, Hamelin RC. Large-scale genomic analyses with machine learning uncover predictive patterns associated with fungal phytopathogenic lifestyles and traits. Sci Rep 2023;13:17203. [PMID: 37821494 PMCID: PMC10567782 DOI: 10.1038/s41598-023-44005-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2023] [Accepted: 10/03/2023] [Indexed: 10/13/2023]  Open
26
Mao H, Jiang C, Tang C, Nie X, Du L, Liu Y, Cheng P, Wu Y, Liu H, Kang Z, Wang X. Wheat adaptation to environmental stresses under climate change: Molecular basis and genetic improvement. MOLECULAR PLANT 2023;16:1564-1589. [PMID: 37671604 DOI: 10.1016/j.molp.2023.09.001] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/04/2023] [Revised: 08/19/2023] [Accepted: 09/01/2023] [Indexed: 09/07/2023]
27
Ramos-Lizardo GN, Mucherino-Muñoz JJ, Aguiar ERGR, Pirovani CP, Corrêa RX. A repertoire of candidate effector proteins of the fungus Ceratocystis cacaofunesta. Sci Rep 2023;13:16368. [PMID: 37773261 PMCID: PMC10542334 DOI: 10.1038/s41598-023-43117-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/31/2023] [Accepted: 09/20/2023] [Indexed: 10/01/2023]  Open
28
Jin P, Kong Y, Zhang Z, Zhang H, Dong Y, Lamour K, Yang Z, Zhou Y, Hu J. Comparative genomics and transcriptome analysis reveals potential pathogenic mechanisms of Microdochium paspali on seashore paspalum. Front Microbiol 2023;14:1259241. [PMID: 37795300 PMCID: PMC10546424 DOI: 10.3389/fmicb.2023.1259241] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2023] [Accepted: 08/31/2023] [Indexed: 10/06/2023]  Open
29
Dumigan CR, Maddock S, Bray-Stone D, Deyholos MK. Hybrid Genome Assembly of Berkeleyomyces rouxiae, an Emerging Cannabis Fungal Pathogen Causing Black Root Rot in an Aeroponic Facility. PLANT DISEASE 2023;107:2679-2686. [PMID: 36774565 DOI: 10.1094/pdis-11-22-2690-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
30
MacCready JS, Roggenkamp EM, Gdanetz K, Chilvers MI. Elucidating the Obligate Nature and Biological Capacity of an Invasive Fungal Corn Pathogen. MOLECULAR PLANT-MICROBE INTERACTIONS : MPMI 2023;36:411-424. [PMID: 36853195 DOI: 10.1094/mpmi-10-22-0213-r] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/18/2023]
31
Advances in molecular interactions on the Rhizoctonia solani-sugar beet pathosystem. FUNGAL BIOL REV 2023. [DOI: 10.1016/j.fbr.2022.11.005] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
32
Khanal S, Gaire SP, Zhou XG. Kernel Smut and False Smut: The Old-Emerging Diseases of Rice-A Review. PHYTOPATHOLOGY 2023;113:931-944. [PMID: 36441871 DOI: 10.1094/phyto-06-22-0226-rvw] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
33
Chiba de Castro WA, Vaz GCDO, Silva Matos DMD, Vale AH, Bueno ACP, Fagundes LFG, Costa LD, Bonugli Santos RC. The Invasive Tradescantia zebrina Affects Litter Decomposition, but It Does Not Change the Lignocellulolytic Fungal Community in the Atlantic Forest, Brazil. PLANTS (BASEL, SWITZERLAND) 2023;12:plants12112162. [PMID: 37299140 DOI: 10.3390/plants12112162] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/21/2023] [Revised: 05/19/2023] [Accepted: 05/25/2023] [Indexed: 06/12/2023]
34
Hu L, Jia R, Sun Y, Chen J, Chen N, Zhang J, Wang Y. Streptomyces pratensis S10 Controls Fusarium Head Blight by Suppressing Different Stages of the Life Cycle and ATP Production. PLANT DISEASE 2023:PDIS09222063RE. [PMID: 36269586 DOI: 10.1094/pdis-09-22-2063-re] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/20/2023]
35
Rafiqi M, Kosawang C, Peers JA, Jelonek L, Yvanne H, McMullan M, Nielsen LR. Endophytic fungi related to the ash dieback causal agent encode signatures of pathogenicity on European ash. IMA Fungus 2023;14:10. [PMID: 37170345 PMCID: PMC10176688 DOI: 10.1186/s43008-023-00115-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/19/2023] [Accepted: 05/02/2023] [Indexed: 05/13/2023]  Open
36
Long L, Wang W, Liu Z, Lin Y, Wang J, Lin Q, Ding S. Insights into the capability of the lignocellulolytic enzymes of Penicillium parvum 4-14 to saccharify corn bran after alkaline hydrogen peroxide pretreatment. BIOTECHNOLOGY FOR BIOFUELS AND BIOPRODUCTS 2023;16:79. [PMID: 37170321 PMCID: PMC10176746 DOI: 10.1186/s13068-023-02319-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2023] [Accepted: 04/10/2023] [Indexed: 05/13/2023]
37
Zhong H, Zheng N, Wang J, Zhao S. Isolation and pan-genome analysis of Enterobacter hormaechei Z129, a ureolytic bacterium, from the rumen of dairy cow. Front Microbiol 2023;14:1169973. [PMID: 37089548 PMCID: PMC10117971 DOI: 10.3389/fmicb.2023.1169973] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2023] [Accepted: 03/10/2023] [Indexed: 04/09/2023]  Open
38
Müller M, Kües U, Budde KB, Gailing O. Applying molecular and genetic methods to trees and their fungal communities. Appl Microbiol Biotechnol 2023;107:2783-2830. [PMID: 36988668 PMCID: PMC10106355 DOI: 10.1007/s00253-023-12480-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/19/2022] [Revised: 03/05/2023] [Accepted: 03/07/2023] [Indexed: 03/30/2023]
39
Li S, Wang Z, Gao M, Li T, Cui X, Zu J, Sang S, Fan W, Zhang H. Intraspecific Comparative Analysis Reveals Genomic Variation of Didymella arachidicola and Pathogenicity Factors Potentially Related to Lesion Phenotype. BIOLOGY 2023;12:biology12030476. [PMID: 36979167 PMCID: PMC10045276 DOI: 10.3390/biology12030476] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/29/2023] [Revised: 03/16/2023] [Accepted: 03/17/2023] [Indexed: 03/30/2023]
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Caballero JRI, Lalande BM, Hanna JW, Klopfenstein NB, Kim MS, Stewart JE. Genomic Comparisons of Two Armillaria Species with Different Ecological Behaviors and Their Associated Soil Microbial Communities. MICROBIAL ECOLOGY 2023;85:708-729. [PMID: 35312808 DOI: 10.1007/s00248-022-01989-8] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2021] [Accepted: 03/06/2022] [Indexed: 06/14/2023]
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Bi K, Liang Y, Mengiste T, Sharon A. Killing softly: a roadmap of Botrytis cinerea pathogenicity. TRENDS IN PLANT SCIENCE 2023;28:211-222. [PMID: 36184487 DOI: 10.1016/j.tplants.2022.08.024] [Citation(s) in RCA: 43] [Impact Index Per Article: 43.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/12/2022] [Revised: 08/23/2022] [Accepted: 08/31/2022] [Indexed: 06/16/2023]
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Linking processes to community functions—insights into litter decomposition combining fungal metatranscriptomics and environmental NMR profiling. Mycol Prog 2023. [DOI: 10.1007/s11557-022-01859-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/20/2023]
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de Menezes TA, Aburjaile FF, Quintanilha-Peixoto G, Tomé LMR, Fonseca PLC, Mendes-Pereira T, Araújo DS, Melo TS, Kato RB, Delabie JHC, Ribeiro SP, Brenig B, Azevedo V, Drechsler-Santos ER, Andrade BS, Góes-Neto A. Unraveling the Secrets of a Double-Life Fungus by Genomics: Ophiocordyceps australis CCMB661 Displays Molecular Machinery for Both Parasitic and Endophytic Lifestyles. J Fungi (Basel) 2023;9:jof9010110. [PMID: 36675931 PMCID: PMC9864599 DOI: 10.3390/jof9010110] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2022] [Revised: 12/31/2022] [Accepted: 01/09/2023] [Indexed: 01/15/2023]  Open
44
Srivastava AK, Srivastava R, Yadav J, Singh AK, Tiwari PK, Srivastava AK, Sahu PK, Singh SM, Kashyap PL. Virulence and pathogenicity determinants in whole genome sequence of Fusarium udum causing wilt of pigeon pea. Front Microbiol 2023;14:1066096. [PMID: 36876067 PMCID: PMC9981795 DOI: 10.3389/fmicb.2023.1066096] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2022] [Accepted: 01/23/2023] [Indexed: 02/19/2023]  Open
45
Kalntremtziou M, Papaioannou IA, Vangalis V, Polemis E, Pappas KM, Zervakis GI, Typas MA. Evaluation of the lignocellulose degradation potential of Mediterranean forests soil microbial communities through diversity and targeted functional metagenomics. Front Microbiol 2023;14:1121993. [PMID: 36922966 PMCID: PMC10008878 DOI: 10.3389/fmicb.2023.1121993] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/12/2022] [Accepted: 01/31/2023] [Indexed: 02/28/2023]  Open
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Botrytis cinerea Transcription Factor BcXyr1 Regulates (Hemi-)Cellulase Production and Fungal Virulence. mSystems 2022;7:e0104222. [PMID: 36468854 PMCID: PMC9765177 DOI: 10.1128/msystems.01042-22] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/07/2022]  Open
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Reveglia P, Billones-Baaijens R, Savocchia S. Phytotoxic Metabolites Produced by Fungi Involved in Grapevine Trunk Diseases: Progress, Challenges, and Opportunities. PLANTS (BASEL, SWITZERLAND) 2022;11:3382. [PMID: 36501420 PMCID: PMC9736528 DOI: 10.3390/plants11233382] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/26/2022] [Revised: 11/30/2022] [Accepted: 12/02/2022] [Indexed: 06/17/2023]
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The pan-genome of Aspergillus fumigatus provides a high-resolution view of its population structure revealing high levels of lineage-specific diversity driven by recombination. PLoS Biol 2022;20:e3001890. [PMID: 36395320 PMCID: PMC9714929 DOI: 10.1371/journal.pbio.3001890] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2022] [Revised: 12/01/2022] [Accepted: 10/26/2022] [Indexed: 11/18/2022]  Open
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Gourlie R, McDonald M, Hafez M, Ortega-Polo R, Low KE, Abbott DW, Strelkov SE, Daayf F, Aboukhaddour R. The pangenome of the wheat pathogen Pyrenophora tritici-repentis reveals novel transposons associated with necrotrophic effectors ToxA and ToxB. BMC Biol 2022;20:239. [PMID: 36280878 PMCID: PMC9594970 DOI: 10.1186/s12915-022-01433-w] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2022] [Accepted: 10/04/2022] [Indexed: 11/10/2022]  Open
50
A conserved enzyme of smut fungi facilitates cell-to-cell extension in the plant bundle sheath. Nat Commun 2022;13:6003. [PMID: 36224193 PMCID: PMC9556619 DOI: 10.1038/s41467-022-33815-7] [Citation(s) in RCA: 13] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/19/2022] [Accepted: 10/04/2022] [Indexed: 12/01/2022]  Open
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