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For: Sreelakshmi Y, Gupta S, Bodanapu R, Chauhan VS, Hanjabam M, Thomas S, Mohan V, Sharma S, Srinivasan R, Sharma R. NEATTILL: A simplified procedure for nucleic acid extraction from arrayed tissue for TILLING and other high-throughput reverse genetic applications. Plant Methods 2010;6:3. [PMID: 20181012 PMCID: PMC2828980 DOI: 10.1186/1746-4811-6-3] [Citation(s) in RCA: 23] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/07/2009] [Accepted: 01/26/2010] [Indexed: 05/28/2023]
Number Cited by Other Article(s)
1
Nizampatnam NR, Sharma K, Gupta P, Pamei I, Sarma S, Sreelakshmi Y, Sharma R. Introgression of a dominant phototropin1 mutant enhances carotenoids and boosts flavour-related volatiles in genome-edited tomato RIN mutants. THE NEW PHYTOLOGIST 2024;241:2227-2242. [PMID: 38151719 DOI: 10.1111/nph.19510] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/17/2023] [Accepted: 12/10/2023] [Indexed: 12/29/2023]
2
Gupta P, Dholaniya PS, Princy K, Madhavan AS, Sreelakshmi Y, Sharma R. Augmenting tomato functional genomics with a genome-wide induced genetic variation resource. FRONTIERS IN PLANT SCIENCE 2024;14:1290937. [PMID: 38328621 PMCID: PMC10848261 DOI: 10.3389/fpls.2023.1290937] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/08/2023] [Accepted: 12/22/2023] [Indexed: 02/09/2024]
3
Šišić A, Baćanović-Šišić J, Gamba FM, Finckh MR. Didymella pinodella: An Important Pea Root Rot Pathogen in France to Watch Out For? J Fungi (Basel) 2024;10:44. [PMID: 38248955 PMCID: PMC10820343 DOI: 10.3390/jof10010044] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2023] [Revised: 12/24/2023] [Accepted: 01/02/2024] [Indexed: 01/23/2024]  Open
4
Satyavathi VV, Princy K, Gupta N, Nizampatnam NR, Sharma R, Sreelakshmi Y. A Comprehensive Protocol for Assembly of Multiple gRNAs into a Direct Vector for Genome Editing in Tomato. Methods Mol Biol 2024;2788:317-335. [PMID: 38656523 DOI: 10.1007/978-1-0716-3782-1_19] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 04/26/2024]
5
Selvakumar R, Jat GS, Manjunathagowda DC. Allele mining through TILLING and EcoTILLING approaches in vegetable crops. PLANTA 2023;258:15. [PMID: 37311932 DOI: 10.1007/s00425-023-04176-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/06/2023] [Accepted: 06/01/2023] [Indexed: 06/15/2023]
6
A Novel Real Time PCR Method for the Detection and Quantification of Didymella pinodella in Symptomatic and Asymptomatic Plant Hosts. J Fungi (Basel) 2021;8:jof8010041. [PMID: 35049982 PMCID: PMC8780382 DOI: 10.3390/jof8010041] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Revised: 12/28/2021] [Accepted: 12/29/2021] [Indexed: 11/24/2022]  Open
7
Kilambi HV, Dindu A, Sharma K, Nizampatnam NR, Gupta N, Thazath NP, Dhanya AJ, Tyagi K, Sharma S, Kumar S, Sharma R, Sreelakshmi Y. The new kid on the block: a dominant-negative mutation of phototropin1 enhances carotenoid content in tomato fruits. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021;106:844-861. [PMID: 33608974 DOI: 10.1111/tpj.15206] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/26/2020] [Revised: 01/15/2021] [Accepted: 02/10/2021] [Indexed: 06/12/2023]
8
Sharma K, Gupta S, Sarma S, Rai M, Sreelakshmi Y, Sharma R. Mutations in tomato 1-aminocyclopropane carboxylic acid synthase2 uncover its role in development beside fruit ripening. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021;106:95-112. [PMID: 33370496 DOI: 10.1111/tpj.15148] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2020] [Revised: 11/26/2020] [Accepted: 12/03/2020] [Indexed: 06/12/2023]
9
Sharma K, Gupta S, Sarma S, Rai M, Sreelakshmi Y, Sharma R. Mutations in tomato 1-aminocyclopropane carboxylic acid synthase2 uncover its role in development beside fruit ripening. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2021;106:95-112. [PMID: 33370496 DOI: 10.1101/2020.05.12.090431] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/26/2020] [Revised: 11/26/2020] [Accepted: 12/03/2020] [Indexed: 05/24/2023]
10
A Low-Cost High-Throughput Method for Plant Genomic DNA Isolation. Methods Mol Biol 2019. [PMID: 31541433 DOI: 10.1007/978-1-4939-9865-4_1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/27/2024]
11
de Bang L, Torp AM, Rasmussen SK. TILLING in Brachypodium distachyon. Methods Mol Biol 2018;1667:173-186. [PMID: 29039011 DOI: 10.1007/978-1-4939-7278-4_13] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/07/2023]
12
Sarma S, Pandey AK, Sharma K, Ravi M, Sreelakshmi Y, Sharma R. MutS-Homolog2 silencing generates tetraploid meiocytes in tomato (Solanum lycopersicum). PLANT DIRECT 2018;2:e00017. [PMID: 31245679 PMCID: PMC6508528 DOI: 10.1002/pld3.17] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2017] [Revised: 09/07/2017] [Accepted: 09/12/2017] [Indexed: 05/16/2023]
13
Gupta P, Reddaiah B, Salava H, Upadhyaya P, Tyagi K, Sarma S, Datta S, Malhotra B, Thomas S, Sunkum A, Devulapalli S, Till BJ, Sreelakshmi Y, Sharma R. Next-generation sequencing (NGS)-based identification of induced mutations in a doubly mutagenized tomato (Solanum lycopersicum) population. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2017;92:495-508. [PMID: 28779536 DOI: 10.1111/tpj.13654] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/23/2017] [Revised: 07/25/2017] [Accepted: 07/26/2017] [Indexed: 05/21/2023]
14
Bodanapu R, Gupta SK, Basha PO, Sakthivel K, Sreelakshmi Y, Sharma R. Nitric Oxide Overproduction in Tomato shr Mutant Shifts Metabolic Profiles and Suppresses Fruit Growth and Ripening. FRONTIERS IN PLANT SCIENCE 2016;7:1714. [PMID: 27965677 PMCID: PMC5124567 DOI: 10.3389/fpls.2016.01714] [Citation(s) in RCA: 25] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/16/2016] [Accepted: 10/31/2016] [Indexed: 05/23/2023]
15
Garcia V, Bres C, Just D, Fernandez L, Tai FWJ, Mauxion JP, Le Paslier MC, Bérard A, Brunel D, Aoki K, Alseekh S, Fernie AR, Fraser PD, Rothan C. Rapid identification of causal mutations in tomato EMS populations via mapping-by-sequencing. Nat Protoc 2016;11:2401-2418. [PMID: 27809315 DOI: 10.1038/nprot.2016.143] [Citation(s) in RCA: 42] [Impact Index Per Article: 5.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
16
Upadhyaya P, Tyagi K, Sarma S, Tamboli V, Sreelakshmi Y, Sharma R. Natural variation in folate levels among tomato (Solanum lycopersicum) accessions. Food Chem 2016;217:610-619. [PMID: 27664678 DOI: 10.1016/j.foodchem.2016.09.031] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/19/2015] [Revised: 06/02/2016] [Accepted: 09/05/2016] [Indexed: 11/17/2022]
17
Mohan V, Gupta S, Thomas S, Mickey H, Charakana C, Chauhan VS, Sharma K, Kumar R, Tyagi K, Sarma S, Gupta SK, Kilambi HV, Nongmaithem S, Kumari A, Gupta P, Sreelakshmi Y, Sharma R. Tomato Fruits Show Wide Phenomic Diversity but Fruit Developmental Genes Show Low Genomic Diversity. PLoS One 2016;11:e0152907. [PMID: 27077652 PMCID: PMC4831840 DOI: 10.1371/journal.pone.0152907] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/31/2015] [Accepted: 03/21/2016] [Indexed: 01/23/2023]  Open
18
Mohan V, Pandey A, Sreelakshmi Y, Sharma R. Neofunctionalization of Chromoplast Specific Lycopene Beta Cyclase Gene (CYC-B) in Tomato Clade. PLoS One 2016;11:e0153333. [PMID: 27070417 PMCID: PMC4829152 DOI: 10.1371/journal.pone.0153333] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/20/2015] [Accepted: 03/28/2016] [Indexed: 11/18/2022]  Open
19
Rothan C, Bres C, Garcia V, Just D. Tomato Resources for Functional Genomics. COMPENDIUM OF PLANT GENOMES 2016. [DOI: 10.1007/978-3-662-53389-5_5] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/27/2022]
20
Tissier A. Glandular trichomes: what comes after expressed sequence tags? THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2012;70:51-68. [PMID: 22449043 DOI: 10.1111/j.1365-313x.2012.04913.x] [Citation(s) in RCA: 138] [Impact Index Per Article: 11.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/18/2023]
21
Kurowska M, Daszkowska-Golec A, Gruszka D, Marzec M, Szurman M, Szarejko I, Maluszynski M. TILLING: a shortcut in functional genomics. J Appl Genet 2011;52:371-90. [PMID: 21912935 PMCID: PMC3189332 DOI: 10.1007/s13353-011-0061-1] [Citation(s) in RCA: 98] [Impact Index Per Article: 7.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/18/2011] [Revised: 08/16/2011] [Accepted: 08/17/2011] [Indexed: 11/01/2022]
22
Evaluation and optimisation of bacterial genomic DNA extraction for no-culture techniques applied to vinegars. Food Microbiol 2011;28:1374-9. [DOI: 10.1016/j.fm.2011.06.009] [Citation(s) in RCA: 25] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2011] [Revised: 06/07/2011] [Accepted: 06/13/2011] [Indexed: 11/23/2022]
23
Chen Y, Wilde HD. Mutation scanning of peach floral genes. BMC PLANT BIOLOGY 2011;11:96. [PMID: 21605436 PMCID: PMC3120741 DOI: 10.1186/1471-2229-11-96] [Citation(s) in RCA: 8] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/09/2011] [Accepted: 05/23/2011] [Indexed: 05/30/2023]
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