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For: Glendinning L, Collie D, Wright S, Rutherford KMD, McLachlan G. Comparing microbiotas in the upper aerodigestive and lower respiratory tracts of lambs. Microbiome 2017;5:145. [PMID: 29078799 PMCID: PMC5658956 DOI: 10.1186/s40168-017-0364-5] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/19/2016] [Accepted: 10/19/2017] [Indexed: 06/07/2023]
Number Cited by Other Article(s)
1
Wang H, Wang Y. What Makes the Gut-Lung Axis Working? From the Perspective of Microbiota and Traditional Chinese Medicine. THE CANADIAN JOURNAL OF INFECTIOUS DISEASES & MEDICAL MICROBIOLOGY = JOURNAL CANADIEN DES MALADIES INFECTIEUSES ET DE LA MICROBIOLOGIE MEDICALE 2024;2024:8640014. [PMID: 38274122 PMCID: PMC10810697 DOI: 10.1155/2024/8640014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/05/2023] [Revised: 12/21/2023] [Accepted: 01/08/2024] [Indexed: 01/27/2024]
2
McDaneld TG, Eicher SD, Dickey A, Kritchevsky JE, Bryan KA, Chitko-McKown CG. Probiotics in milk replacer affect the microbiome of the lung in neonatal dairy calves. Front Microbiol 2024;14:1298570. [PMID: 38249465 PMCID: PMC10797021 DOI: 10.3389/fmicb.2023.1298570] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/21/2023] [Accepted: 12/04/2023] [Indexed: 01/23/2024]  Open
3
Zhang Z, Zhang C, Zhong Y, Yang S, Deng F, Li Y, Chai J. The spatial dissimilarities and connections of the microbiota in the upper and lower respiratory tract of beef cattle. Front Cell Infect Microbiol 2023;13:1269726. [PMID: 38029262 PMCID: PMC10660669 DOI: 10.3389/fcimb.2023.1269726] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2023] [Accepted: 10/06/2023] [Indexed: 12/01/2023]  Open
4
Zeineldin M, Barakat R. Host-specific signatures of the respiratory microbiota in domestic animals. Res Vet Sci 2023;164:105037. [PMID: 37801741 DOI: 10.1016/j.rvsc.2023.105037] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2023] [Revised: 09/14/2023] [Accepted: 09/23/2023] [Indexed: 10/08/2023]
5
Zhang Y, Chen X, Wang Y, Li L, Ju Q, Zhang Y, Xi H, Wang F, Qiu D, Liu X, Chang N, Zhang W, Zhang C, Wang K, Li L, Zhang J. Alterations of lower respiratory tract microbiome and short-chain fatty acids in different segments in lung cancer: a multiomics analysis. Front Cell Infect Microbiol 2023;13:1261284. [PMID: 37915846 PMCID: PMC10617678 DOI: 10.3389/fcimb.2023.1261284] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2023] [Accepted: 09/20/2023] [Indexed: 11/03/2023]  Open
6
Miao Y, Zhao X, Lei J, Ding J, Feng H, Wu K, Liu J, Wang C, Ye D, Wang X, Wang J, Yang Z. Characterization of Lung Microbiomes in Pneumonic Hu Sheep Using Culture Technique and 16S rRNA Gene Sequencing. Animals (Basel) 2023;13:2763. [PMID: 37685027 PMCID: PMC10486422 DOI: 10.3390/ani13172763] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/16/2023] [Revised: 08/13/2023] [Accepted: 08/28/2023] [Indexed: 09/10/2023]  Open
7
Bond S, McMullen C, Timsit E, Léguillette R. Topography of the respiratory, oral, and guttural pouch bacterial and fungal microbiotas in horses. J Vet Intern Med 2023;37:349-360. [PMID: 36607177 PMCID: PMC9889660 DOI: 10.1111/jvim.16612] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2022] [Accepted: 12/08/2022] [Indexed: 01/07/2023]  Open
8
Raabis SM, Holschbach CL, Skarlupka JH, Suen G, Ollivett TL. Assessing the effects of experimental bacterial challenge with Pasteurella multocida and ampicillin on the respiratory microbiota of pre-weaned Holstein calves. Vet Microbiol 2022;269:109428. [PMID: 35427993 PMCID: PMC11215343 DOI: 10.1016/j.vetmic.2022.109428] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2021] [Revised: 03/08/2022] [Accepted: 04/01/2022] [Indexed: 11/30/2022]
9
Chai J, Capik SF, Kegley B, Richeson JT, Powell JG, Zhao J. Bovine respiratory microbiota of feedlot cattle and its association with disease. Vet Res 2022;53:4. [PMID: 35022062 PMCID: PMC8756723 DOI: 10.1186/s13567-021-01020-x] [Citation(s) in RCA: 27] [Impact Index Per Article: 13.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2021] [Accepted: 12/06/2021] [Indexed: 12/15/2022]  Open
10
Ong CT, Ross EM, Boe-Hansen GB, Turni C, Hayes BJ, Tabor AE. Technical note: overcoming host contamination in bovine vaginal metagenomic samples with nanopore adaptive sequencing. J Anim Sci 2022;100:skab344. [PMID: 34791313 PMCID: PMC8722758 DOI: 10.1093/jas/skab344] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2021] [Accepted: 11/10/2021] [Indexed: 12/11/2022]  Open
11
McGinniss JE, Whiteside SA, Simon-Soro A, Diamond JM, Christie JD, Bushman FD, Collman RG. The lung microbiome in lung transplantation. J Heart Lung Transplant 2021;40:733-744. [PMID: 34120840 PMCID: PMC8335643 DOI: 10.1016/j.healun.2021.04.014] [Citation(s) in RCA: 15] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/17/2021] [Revised: 04/13/2021] [Accepted: 04/19/2021] [Indexed: 12/21/2022]  Open
12
Wu BG, Sulaiman I, Tsay JCJ, Perez L, Franca B, Li Y, Wang J, Gonzalez AN, El-Ashmawy M, Carpenito J, Olsen E, Sauthoff M, Yie K, Liu X, Shen N, Clemente JC, Kapoor B, Zangari T, Mezzano V, Loomis C, Weiden MD, Koralov SB, D'Armiento J, Ahuja SK, Wu XR, Weiser JN, Segal LN. Episodic Aspiration with Oral Commensals Induces a MyD88-dependent, Pulmonary T-Helper Cell Type 17 Response that Mitigates Susceptibility to Streptococcus pneumoniae. Am J Respir Crit Care Med 2021;203:1099-1111. [PMID: 33166473 DOI: 10.1164/rccm.202005-1596oc] [Citation(s) in RCA: 28] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022]  Open
13
Mach N, Baranowski E, Nouvel LX, Citti C. The Airway Pathobiome in Complex Respiratory Diseases: A Perspective in Domestic Animals. Front Cell Infect Microbiol 2021;11:583600. [PMID: 34055660 PMCID: PMC8160460 DOI: 10.3389/fcimb.2021.583600] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2020] [Accepted: 04/30/2021] [Indexed: 12/19/2022]  Open
14
Tang Q, Huang K, Liu J, Jin X, Li C. Distribution characteristics of bioaerosols inside pig houses and the respiratory tract of pigs. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2021;212:112006. [PMID: 33556810 DOI: 10.1016/j.ecoenv.2021.112006] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/08/2020] [Revised: 01/10/2021] [Accepted: 01/27/2021] [Indexed: 06/12/2023]
15
McMullen C, Alexander TW, Léguillette R, Workentine M, Timsit E. Topography of the respiratory tract bacterial microbiota in cattle. MICROBIOME 2020;8:91. [PMID: 32522285 PMCID: PMC7288481 DOI: 10.1186/s40168-020-00869-y] [Citation(s) in RCA: 33] [Impact Index Per Article: 8.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/12/2020] [Accepted: 05/13/2020] [Indexed: 06/11/2023]
16
Carney SM, Clemente JC, Cox MJ, Dickson RP, Huang YJ, Kitsios GD, Kloepfer KM, Leung JM, LeVan TD, Molyneaux PL, Moore BB, O'Dwyer DN, Segal LN, Garantziotis S. Methods in Lung Microbiome Research. Am J Respir Cell Mol Biol 2020;62:283-299. [PMID: 31661299 PMCID: PMC7055701 DOI: 10.1165/rcmb.2019-0273tr] [Citation(s) in RCA: 73] [Impact Index Per Article: 18.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/01/2019] [Accepted: 10/29/2019] [Indexed: 12/13/2022]  Open
17
Lv X, Chai J, Diao Q, Huang W, Zhuang Y, Zhang N. The Signature Microbiota Drive Rumen Function Shifts in Goat Kids Introduced to Solid Diet Regimes. Microorganisms 2019;7:microorganisms7110516. [PMID: 31683646 PMCID: PMC6921049 DOI: 10.3390/microorganisms7110516] [Citation(s) in RCA: 30] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/02/2019] [Revised: 10/21/2019] [Accepted: 10/29/2019] [Indexed: 11/24/2022]  Open
18
Vientós-Plotts AI, Ericsson AC, Rindt H, Reinero CR. Respiratory Dysbiosis in Canine Bacterial Pneumonia: Standard Culture vs. Microbiome Sequencing. Front Vet Sci 2019;6:354. [PMID: 31681810 PMCID: PMC6798064 DOI: 10.3389/fvets.2019.00354] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/04/2019] [Accepted: 09/26/2019] [Indexed: 12/31/2022]  Open
19
McGinniss JE, Collman RG. Of Mice and Men . . . and Microbes: Conclusions and Cautions from a Murine Study of the Lung Microbiome and Microbiome-Immune Interactions. Am J Respir Crit Care Med 2019;198:419-422. [PMID: 29995432 DOI: 10.1164/rccm.201803-0586ed] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022]  Open
20
Next generation microbiology and cystic fibrosis diagnostics. Curr Opin Pulm Med 2018;24:599-605. [DOI: 10.1097/mcp.0000000000000516] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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