The Fishes of the Amazon: Distribution and Biogeographical Patterns, with a Comprehensive List of Species

SUPPLEMENTAL DESCRIPTION OF CABALLEROTREMA ANNULATUM (DIESING, 1850) OSTROWSKI DE NÚÑEZ AND SATTMANN, 2002 (DIGENEA: CABALLEROTREMATIDAE) FROM A NEW HOST (ELECTROPHORUS CF. VARII) AND LOCALITY (AMAZON RIVER, COLOMBIA) WITH PHYLOGENETIC ANALYSIS AND EMENDED GENERIC DIAGNOSIS

Herein, we provide a supplemental description of Caballerotrema annulatum (Diesing, 1850) Ostrowski de Núñez and Sattmann, 2002 (Digenea: Caballerotrematidae Tkach, Kudlai, and Kostadinova, 2016) based on specimens collected from the intestine of an electric eel, Electrophorus cf. varii (Gymnotiformes: Gymnotidae) captured in the Amazon River (Colombia). This caballerotrematid can be differentiated from its congeners by the following combination of morphological features: body surface spines forming contiguous transverse rows, concentric (wrapping dorso-ventrally around body), distributing into posterior body half (vs. restricted to anterior body half in Caballerotrema brasiliensePrudhoe, 1960; indeterminate for Caballerotrema aruanenseThatcher, 1980 and Caballerotrema piscicola [Stunkard, 1960] Kostadinova and Gibson, 2001); head collar lacking projections (vs. having them in C. brasiliense, C. aruanense, and C. piscicola), narrow (head collar more narrow than maximum body width vs. the head collar being obviously wider than the body in C. brasiliense, C. aruanense, and C. piscicola); corner spines clustered (vs. corner spines distributing as 2 separated pairs in C. brasiliense, C. aruanense, and C. piscicola); pharynx approximately at level of the corner spines (vs. pharynx far anterior to corner spines in C. brasiliense, C. aruanense, and C. piscicola); and testes ovoid and nonoverlapping (C. aruanense; vs. sinuous and overlapping in C. brasiliense and C. piscicola). Based on our results, we revise the diagnosis of CaballerotremaPrudhoe, 1960 to include features associated with the shape and distribution of body surface spines, orientation and position of head collar spines, cirrus sac, seminal vesicle, oviduct, Laurer's canal, oötype, vitellarium, and transverse vitelline ducts. We performed Bayesian inference analyses using the partial large subunit ribosomal (28S) DNA gene. Our 28S sequence of C. annulatum was recovered sister to that of Caballerotrema sp. (which is the only other caballerotrematid sequence available in GenBank) from an arapaima, Arapaima gigas (Schinz, 1822) (Osteoglossiformes: Arapaimidae) in the Peruvian Amazon. Our sequence of C. annulatum comprises the only caballerotrematid sequenced tethered to a morphological description and a voucher specimen in a lending museum. The present study is a new host record and new locality record for C. annulatum. The phylogeny comprises the most resolved and taxon-rich evolutionary hypothesis for Echinostomatoidea published to date.

Arapaima gigas stocks have declined drastically in the lower Tocantins River in the Amazon Microregion

Arapaima gigas, an emblematic species of the Amazon region and a longstanding primary fishing resource, currently holds a "Data Deficient" status on the International Union for Conservation of Nature Red List, and is listed as an endangered species in Brazil. The Tocantins River is the most extensively modified large tributary of the Amazon Basin, and thus can affect the dynamics of ichthyofaunal populations. Over a period of 1 year, representatives of the fishing communities and fishermen from 25 fishing communities from four municipalities in the lower Tocantins River region were interviewed, and the obtained information was evaluated based on the literature to survey the population abundance status of A. gigas in the region and its impact on local communities. Among the fishermen interviewed, only one reported still encountering and fishing A. gigas on Jaracuera Island. The disappearance of A. gigas in the region are viewed as having economically disastrous consequences for the residents. Additionally, other endemic fish species are no longer observed in this locality either. If fishery management officials do not work together with local communities, A. gigas could disappear from the northern region of Brazil, where information on the dynamics of A. gigas fishing is lacking.

Identification of fish specimens of the Tocantins River, Brazil, using DNA barcoding

The fish fauna of the Tocantins River possesses many endemic species; however, it is little studied in molecular terms and is quite threatened by the construction of several hydroelectric dams. Therefore, the objective of this study was to identify the ichthyofauna of the Tocantins River using DNA barcoding. For this, collections were carried out in five points of this river, which resulted in the capture of 725 individuals from which partial sequences of the cytochrome oxidase subunit I (COI) gene were obtained for genetic analysis. A total of 443 haplotypes were recovered with the mean intraspecific K2P genetic distance of 1.82%. Altogether, 138 species were identified based on morphological criteria, which was a quantity that was much lower than that indicated by the four molecular methods (assemble species by automatic partitioning [ASAP], barcode index number [BIN], generalized mixed Yule coalescent (GMYC), and Bayesian Poisson tree processes [bPTP]) through which 152-157 molecular entities were identified. In all, 41 unique BINs were obtained based on the data generated in the BOLDSystems platform. According to the result indicated by ASAP (species delimitation approach considered the most appropriate in the present study), there was an increase of 17 molecular entities (12.32%), when compared to the number of species identified through their morphological criteria, as it can show cryptic diversity, candidates for new species, and misidentifications. There were 21 incongruities indicated between the different identification approaches for species. Therefore, it is suggested that these taxonomic problems be cautiously evaluated by experts to solve such taxonomic issues.

A new characid species with remarkable sexual dimorphism (Characiformes: Characidae: Stevardiinae) from the upper Guayabero River, Orinoco basin, Colombia

A new species of characid with remarkable sexual characteristics is described from the upper Guayabero River drainage from the Orinoco basin in Colombia. The new species is included in the genus Monotocheirodon by sharing most of the previously proposed diagnostic features of this genus. It differs from all Stevardiinae by the combination, in adult males, of an enlarged urogenital papilla in contact with the first anal-fin unbranched ray and a highly modified anal fin with enlarged and distally elongated first and second branched anal-fin rays, forming a gonopodium-like structure. In addition, it differs from congeners by the presence of an adipose fin, an incomplete lateral line, an ascending process of the premaxilla dorsally oriented, and a long snout. The new species was discovered from a poorly sampled region in Colombia and is an unexpected new record given its disjunct geographic distribution from other species of the genus. Monotocheirodon species were previously known from piedmont drainages in Bolivia and Peru. The conservation status of the new species is herein categorized following IUCN criteria.

Fishes (Actinopterygii) of the rapids and associated environments in the lower Vaupés River Basin: an undiscovered Colombian Amazon diversity

The Vaupés River stands out as one of the few within the Amazon basin due to its numerous rapids. These riverine fast-flowing sections not only provide habitat to highly specialized fishes but also function as natural barriers hindering the movement of fish along its course. During a fish-collecting expedition in the lower Vaupés River basin in Colombia, 95 species were registered belonging to 30 families and seven orders. Despite recent inventories in the region, our comprehensive sampling efforts particularly focused on the rapids and associated rheophilic fauna, allowing us to contribute the first records of four fish species in Colombia (Mylopluslucienae Andrade, Ota, Bastos & Jégu, 2016, Tometesmakue Jégu, Santos & Jégu, 2002, also first record of the genus, Leptodoraspraelongus (Myers & Weitzman, 1956), and Eigenmanniamatintapereira Peixoto, Dutra & Wosiacki, 2015) and six presumably undescribed species (i.e., Jupiaba sp., Moenkhausia sp., Phenacogaster sp., Bunocephalus sp., Hemiancistrus sp., and Archolaemus sp.). In this study, a commented list of the ichthyofauna of these environments is presented, as well as a photographic catalog of fish species integrated into the CaVFish Project - Colombia.

Geogenomic Predictors of Genetree Heterogeneity Explain Phylogeographic and Introgression History: A Case Study in an Amazonian Bird (Thamnophilus aethiops)

Can knowledge about genome architecture inform biogeographic and phylogenetic inference? Selection, drift, recombination, and gene flow interact to produce a genomic landscape of divergence wherein patterns of differentiation and genealogy vary nonrandomly across the genomes of diverging populations. For instance, genealogical patterns that arise due to gene flow should be more likely to occur on smaller chromosomes, which experience high recombination, whereas those tracking histories of geographic isolation (reduced gene flow caused by a barrier) and divergence should be more likely to occur on larger and sex chromosomes. In Amazonia, populations of many bird species diverge and introgress across rivers, resulting in reticulated genomic signals. Herein, we used reduced representation genomic data to disentangle the evolutionary history of 4 populations of an Amazonian antbird, Thamnophilus aethiops, whose biogeographic history was associated with the dynamic evolution of the Madeira River Basin. Specifically, we evaluate whether a large river capture event ca. 200 Ka, gave rise to reticulated genealogies in the genome by making spatially explicit predictions about isolation and gene flow based on knowledge about genomic processes. We first estimated chromosome-level phylogenies and recovered 2 primary topologies across the genome. The first topology (T1) was most consistent with predictions about population divergence and was recovered for the Z-chromosome. The second (T2), was consistent with predictions about gene flow upon secondary contact. To evaluate support for these topologies, we trained a convolutional neural network to classify our data into alternative diversification models and estimate demographic parameters. The best-fit model was concordant with T1 and included gene flow between non-sister taxa. Finally, we modeled levels of divergence and introgression as functions of chromosome length and found that smaller chromosomes experienced higher gene flow. Given that (1) genetrees supporting T2 were more likely to occur on smaller chromosomes and (2) we found lower levels of introgression on larger chromosomes (and especially the Z-chromosome), we argue that T1 represents the history of population divergence across rivers and T2 the history of secondary contact due to barrier loss. Our results suggest that a significant portion of genomic heterogeneity arises due to extrinsic biogeographic processes such as river capture interacting with intrinsic processes associated with genome architecture. Future phylogeographic studies would benefit from accounting for genomic processes, as different parts of the genome reveal contrasting, albeit complementary histories, all of which are relevant for disentangling the intricate geogenomic mechanisms of biotic diversification. [Amazonia; biogeography; demographic modeling; gene flow; gene tree; genome architecture; geogenomics; introgression; linked selection; neural network; phylogenomic; phylogeography; reproductive isolation; speciation; species tree.].

Unstable environmental conditions constrain the fine-tune between opsin sensitivity and underwater light in an Amazon forest stream fish

Visual adaptations can stem from variations in amino acid composition, chromophore utilization, and differential opsin gene expression levels, enabling individuals to adjust their light sensitivity to environmental lighting conditions. In stable environments, adaptations often involve amino acid substitutions, whereas in unstable conditions, differential gene expression may be a more relevant mechanism. Amazon forest streams present diverse underwater lighting conditions and experience short-term water colour fluctuations. In these environments, it is less likely for genetic and amino acid sequences to undergo modifications that tailor opsin proteins to the prevailing lighting conditions, particularly in species having several copies of the same gene. The sailfin tetra, Crenuchus spilurus, inhabits black and clear water Amazon forest streams. The long-wavelength sensitivity (LWS) is an important component for foraging and courtship. Here, we investigated LWS opsin genes in the sailfin tetra. Three copies of LWS1 and two copies of LWS2 genes were found. The maximum absorbance wavelength (λmax) estimated from the amino acid sequences of LWS1 genes exhibited variation among the different copies. In contrast, the copies of LWS2 genes showed identical expected λmax values. Although the amino acid positions affecting λmax varied among LWS genes, they remained consistent among populations living in different water colours. The relative expression levels of LWS genes differed between gene copies. While not formally tested, our results suggest that in fluctuating environments, visual adaptations may primarily stem from alterations in gene expression profiles and/or chromophore usage rather than precise genetic tuning of protein light sensitivity to environmental lighting conditions.

Two new species of dactylogyrids (Monogenea: Dactylogyridae) infecting the gill filaments of fishes in the southern Peruvian Amazon

Two new dactylogyrid species were found infecting the gill filaments of two freshwater fishes collected in the Amazon River basin around Madre de Dios, Peru, namely, Demidospermus wilveri n. sp. from Loricaria sp. (Siluriformes: Loricariidae), and Notozothecium agusti n. sp. from Brycon amazonicus (Spix & Agassiz) (Characiformes: Bryconidae). Demidospermus wilveri n. sp. is characterized by having the following combination of characteristics: (1) a male copulatory organ (MCO) with 1½ rings and a spoon-shaped distal end, (2) an accessory piece with expanded distal end, (3) dorsal and ventral bars with broadly V-shaped and expanded ends, and (4) hooks similar in size. Notozothecium agusti n. sp. differs from its ten congeners by the following combination of characteristics: (1) a coiled MCO with 1½ rings and a sinuous accessory piece with kidney-shaped distal end, (2) an rod-shaped and straight dorsal bar, (3) and anchors with robust superficial roots. Demidospermus wilveri n. sp. represents the thirty-second species in the genus, the eighth from Peru and the fifth parasitising a loricariid catfish from the Peruvian Amazon. Notozothecium agusti n. sp. is the second species of the genus described in Peru and the first species infecting a bryconid host.

Genomic Architecture Predicts Tree Topology, Population Structuring, and Demographic History in Amazonian Birds

Geographic barriers are frequently invoked to explain genetic structuring across the landscape. However, inferences on the spatial and temporal origins of population variation have been largely limited to evolutionary neutral models, ignoring the potential role of natural selection and intrinsic genomic processes known as genomic architecture in producing heterogeneity in differentiation across the genome. To test how variation in genomic characteristics (e.g. recombination rate) impacts our ability to reconstruct general patterns of differentiation between species that cooccur across geographic barriers, we sequenced the whole genomes of multiple bird populations that are distributed across rivers in southeastern Amazonia. We found that phylogenetic relationships within species and demographic parameters varied across the genome in predictable ways. Genetic diversity was positively associated with recombination rate and negatively associated with species tree support. Gene flow was less pervasive in genomic regions of low recombination, making these windows more likely to retain patterns of population structuring that matched the species tree. We further found that approximately a third of the genome showed evidence of selective sweeps and linked selection, skewing genome-wide estimates of effective population sizes and gene flow between populations toward lower values. In sum, we showed that the effects of intrinsic genomic characteristics and selection can be disentangled from neutral processes to elucidate spatial patterns of population differentiation.

Freshwater fish diversity in the western Amazon basin shaped by Andean uplift since the Late Cretaceous

South America is home to the highest freshwater fish biodiversity on Earth, and the hotspot of species richness is located in the western Amazon basin. The location of this hotspot is enigmatic, as it is inconsistent with the pattern observed in river systems across the world of increasing species richness towards a river's mouth. Here we investigate the role of river capture events caused by Andean mountain building and repeated episodes of flooding in western Amazonia in shaping the modern-day richness pattern of freshwater fishes in South America, and in Amazonia in particular. To this end, we combine a reconstruction of river networks since 80 Ma with a mechanistic model simulating dispersal, allopatric speciation and extinction over the dynamic landscape of rivers and lakes. We show that Andean mountain building and consequent numerous small river capture events in western Amazonia caused freshwater habitats to be highly dynamic, leading to high diversification rates and exceptional richness. The history of marine incursions and lakes, including the Miocene Pebas mega-wetland system in western Amazonia, played a secondary role.

Inventory reveals non-native species and variation in spatial-temporal dynamics of fish community in a Brazilian protected area

The increase in the number of Brazilian protected areas has been progressive and, although it is essential for the conservation of biodiversity, it is important to monitor and properly manage these areas, as they present several cases of biological invasions. The Lençóis Maranhenses constitute the peculiar delta of the Americas and are under the consequences of the bioinvasion of tilapias and peacock bass. Collections were carried out in the Lençóis Maranhenses National Park from March/2016 to November/2020, with the aid of gill nets and cast nets. The species were identified with the help of specialized literature and a historical comparison with previous works was carried out. Cytochrome oxidase subunit I was sequenced to confirm identification of non-native species. We recorded the expansion of the occurrence of Oreochromis niloticus, and the first record of the species Oreochromis mossambicus and Cichla monoculus. A total of 31 species belonging to eight orders, eighteen families and twenty-nine genera were identified, indicating a lag in the diversity of species found in relation to previous studies. After 20 years of the first record of invasive fish, there is an expansion of bioinvasion and new cases that indicate a lack of monitoring and containment measures for the species, indicating the fragility of conservation in the area.

On a new colorful species of Moenkhausia (Characiformes: Characidae) from the upper rio Madeira basin at the Chapada dos Parecis, Brazil, with comments on its conservation and putative biogeographic history

A new species, Moenkhausia iris, is described from the upper rio Madeira basin, Mato Grosso State, Brazil. The new species is unique among congeners by its color in life, which is the dorsal half of body blue or green and ventral half red, more intense above the anal fin. Additionally, it can be distinguished by having a single, vertically elongated humeral spot, a lateral surface of body, caudal peduncle, and anal fin without distinct blotches or oblique marks and 18-19 branched anal-fin rays. The new species is endemic from a small tributary of the Rio Guaporé, rio Madeira drainage at Chapada dos Parecis. Its putatively close relatives are endemic to the upper rio Juruena located at the same shield. Both headwaters are very close to each other, sharing other restricted range species, and their hydrogeological topography indicates the upper rio Juruena stretch was captured by the rio Guaporé through a headwater capture event. Moenkhausia iris is much appreciated in the international aquarium trade, as well as many other tetras endemic from the same area. Exportation is based on the capture of wild individuals so sustainable exploitation is necessary for its conservation.

Influence of abiotic factors on the composition of fish assemblages in the Aracá-Demeni sub-basin of the middle Negro River

We evaluated the influence of flooding and receding comparison and spatial variation on the composition and structure of fish assemblages in blackwater and clearwater rivers of the Aracá-Demeni sub-basin in the middle Negro River, Amazonas state, Brazil. The collections were carried out during the falling-water period (November 2018) and the rising-water period (April 2019) using gillnets with meshes ranging from 30 to 120mm stretched mesh size. Ecological estimates of richness, equitability, the Shannon-Wiener diversity index, and the Berger-Parker index showed no significant differences between the periods. The composition of the ichthyofauna showed variations between the falling-water and rising-water periods. Beta diversity in the Aracá-Demeni sub-basin is almost completely caused by species substitution, with spatial turnover accounting for most of the estimate. The identification of these patterns and of the responsible factors are fundamental for the definition of conservation strategies, especially in an ecosystem whose dynamics can be influenced by climate change through changes in the intensity of the flood pulse and connectivity.

Catfishes: A global review of the literature

This study aims to elucidate the evolution of catfish research publications over recent decades, identify emerging research clusters, examine keyword patterns, determine major contributors (including authors, organizations, and funding agencies), and analyze their collaborative networks and citation bursts on a global scale. The USA, Brazil, China, and India collectively contribute approximately 67% of the total catfish research publications, with a marked increase in prevalence since 2016. The most frequently occurring and dominant keywords are "channel catfish" and "responses," respectively. Intriguingly, our findings reveal 28 distinct article clusters, with prominent clusters including "yellow catfish," "channel catfish", "pectoral girdle," "African catfish", "Rio Sao Francisco basin," "Edwardsiella ictaluri," and "temperature mediated". Concurrently, keyword clustering generates seven main clusters: "new species", "growth performance", "heavy metal", "gonadotropin-releasing", "essential oil", and "olfactory receptor". This study further anticipates future research directions, offering fresh perspectives on the catfish literature landscape. To the best of our knowledge, this is the first article to conduct a comprehensive mapping review of catfish research publications worldwide.

Spatial and seasonal distribution of fish eggs and larvae in one free-flowing river in the Neotropical savanna

Reproduction is one of the most important biological aspects for the maintenance of viable populations, and understanding the spatial and seasonal patterns in the reproduction of Neotropical fish is a point that still needs considerable investigation. In this study, the main aim was to reduce knowledge gaps concerning fish eggs and larvae distribution patterns. Therefore, the River Araguaia basin, one of the main hydrographic basins of the Neotropical savanna, was used as the focal point of study. Samplings of fish eggs and larvae were carried across the hydrological regime during flooding and drought events between December 2018 and July 2020 at 15 sites distributed along a 350 km stretch of the River Araguaia basin. Fish eggs and larvae were found in all sampling sites, with the highest number of catches in the flood season. The fish larvae were represented by 5 orders, 22 families and 22 at the genus or species level. Both environments, tributary and main channel of the River Araguaia, are important for fish reproduction, and no difference was found in the use between the main channel and the tributaries. The results showed that spatial factors are important to explain the change in larval composition, which may have a wide or restricted distribution related to specific habitats. The main factors related to the reproductive activity of fish in this region are the physical and chemical changes in the water that occur in the flood season. These results indicate that the River Araguaia basin has environmental integrity and provides favourable conditions for the reproductive activity of fish, including long-distance migratory species. Considering this, mitigate measures that guarantee the preservation of the natural flow are crucial for the maintenance of fish biodiversity.

A new Moenkhausia (Characiformes: Characidae) from rio Brao Norte, rio Tapajs basin, with comments on the fish endemism of Serra do Cachimbo plateau

A new species of Moenkhausia is described from the rio Brao Norte, a tributary of Rio Teles Pires draining the Serra do Cachimbo, rio Tapajs basin, Par, Brazil. The new species is diagnosed from all congeners, except M. moisae and M. pirauba, by having a high number of scales in the longitudinal series (4346 vs. 2341 in other Moenkhausia species). It can also be distinguished from the aforementioned species based on the combination of the following characters: a single humeral blotch, 2125 branched anal-fin rays, and a round and symmetrical caudal blotch not continuous anteriorly with the dark midlateral stripe. The new tetra herein described represents an additional, possibly endemic, taxon from the headwaters draining from Serra do Cachimbo, in the Brazilian Shield.

New records of Pimelodella (Siluriformes, Heptapteridae) from Colombia for the Amazon River basin, and redescription of P. serrata

We recorded Pimelodella bockmanni and P. serrata for the first time for Colombia, based on specimens collected in tributaries from the main channel of the Amazonas River, in the so-called Trapecio Amazónico, in the southernmost region of this country. We also present morphometric, meristic, and osteological data of the examined material, and provide a complementary morphological description of the poorly known P. serrata, a species known only from the Madeira River drainage in Bolivia and Brazil.

Genotoxicity biomarkers on native fish species from the Araguari River (Amazon biome)

The Araguari River, one of the most important waterways in the Brazilian state of Amapá, is ecologically relevant and essential for the conservation of Amazonian fish biodiversity. Our previous studies demonstrated contamination of water and fish by metals. In particular, water samples showed genotoxic damage in Danio rerio. Here, we extended our studies of potential genotoxic damage to native fish from sampling sites located in the Araguari River lower section. To accomplish this, we collected samples of fish with different feeding behaviors, but in the same sampling sites, and evaluated the same genotoxicity biomarkers in erythrocytes. All eleven species of fish collected in the Araguari River lower section showed profiles and frequencies of genotoxic damage similar to those previously observed in tests with D. rerio, confirming that genotoxic pollutants present in these waters are also causing damage to native fish species.

Checklist of the fish fauna of the Munim River Basin, Maranhão, north-eastern Brazil

Background

The Maranhão State harbours great fish diversity, but some areas are still undersampled or little known, such as the Munim River Basin in the northeast of the State. This lack of knowledge is critical when considering anthropogenic impacts on riverine systems especially in the face of major habitat destruction. These pressing threats mean that a comprehensive understanding of diversity is critical and fish checklists extremely relevant. Therefore, the present study provides a checklist of the fish species found in the Munim River Basin, Maranhão State, north-eastern Brazil, based on collected specimens.

New information

A total of 123 species were recorded for the Munim River Basin, with only two non-native species, Oreochromisniloticus and Colossomamacropomum, showing that the fish assemblage has relatively high ecological integrity. In addition, 29 species could not be identified at the species level, indicating the presence of species that are probably new to science in the Basin. A predominance of species belonging to the fish orders Characiformes and Siluriformes, with Characidae being recovered as the most species-rich family (21 species) agrees with the general pattern for river basins in the Neotropical Region. The total fish diversity was estimated by extensive fieldwork, including several sampling gears, carried out in different seasons (dry and rainy) and exploring different environments with both daily and nocturnal sampling, from the Basin's source to its mouth. A total of 84 sites were sampled between 2010 and 2022, resulting in 12 years of fieldwork. Fish assemblages were distinct in the Estuary and Upper river basin sections and more similar in the Lower and Middle sections indicating environmental filtering processes. Species were weakly nested across basin sections, but unique species were found in each section (per Simpsons Index). High variability of species richness in the Middle river basin section is likely due to microhabitat heterogeneity supporting specialist fish communities.

Chromosomal rearrangements and the first indication of an ♀X1 X1 X2 X2 /♂X1 X2 Y sex chromosome system in Rineloricaria fishes (Teleostei: Siluriformes)

Rineloricaria is the most diverse genus within the freshwater fish subfamily Loricariinae, and it is widely distributed in the Neotropical region. Despite limited cytogenetic data, records from southern and south-eastern Brazil suggest a high rate of chromosomal rearrangements in this genus, mirrored in remarkable inter- and intraspecific karyotype variability. In the present work, we investigated the karyotype features of Rineloricaria teffeana, an endemic representative from northern Brazil, using both conventional and molecular cytogenetic techniques. We revealed different diploid chromosome numbers (2n) between sexes (33♂/34♀), which suggests the presence of an ♀X₁ X₁ X₂ X₂ /♂X₁ X₂ Y multiple sex chromosome system. The male-limited Y chromosome was the largest and the only biarmed element in the karyotype, implying Y-autosome fusion as the most probable mechanism behind its origination. C-banding revealed low amounts of constitutive heterochromatin, mostly confined to the (peri)centromeric regions of most chromosomes (including the X₂ and the Y) but also occupying the distal regions of a few chromosomal pairs. The chromosomal localization of the 18S ribosomal DNA (rDNA) clusters revealed a single site on chromosome pair 4, which was adjacent to the 5S rDNA cluster. Additional 5S rDNA loci were present on the autosome pair 8, X₁ chromosome, and in the presumed fusion point on the Y chromosome. The probe for telomeric repeat motif (TTAGGG)_n revealed signals of variable intensities at the ends of all chromosomes except for the Y chromosome, where no detectable signals were evidenced. Male-to-female comparative genomic hybridization revealed no sex-specific or sex-biased repetitive DNA accumulations, suggesting a presumably low level of neo-Y chromosome differentiation. We provide evidence that rDNA sites might have played a role in the formation of this putative multiple sex chromosome system and that chromosome fusions originate through different mechanisms among different Rineloricaria species.

Phylogenomics of trans-Andean tetras of the genus Hyphessobrycon Durbin 1908 (Stethaprioninae: Characidae) and colonization patterns of Middle America

Hyphessobrycon is one of the most species rich and widely distributed genera in the family Characidae, with more than 160 species ranging from Veracruz, Mexico to Mar Chiquita Lagoon in Buenos Aires, Argentina. The majority of Hyphessobrycon diversity shows a cis-Andean distribution; only nine species are trans-Andean including H. compressus (Meek 1908). It is well established that Hyphessobrycon is not monophyletic but it has been suggested that natural groups can be identified within the larger Hyphessobrycon species group. In this study, we tested the monophyly of trans-Andean species of Hyphessobrycon and investigated the placement of H. compressus. We inferred the first phylogenomic hypothesis of trans-Andean Hyphessobrycon that includes nearly complete taxonomic sampling (eight of nine valid species) using ultraconserved elements (UCEs). We analyzed 75% (1682 UCEs), 90% (1258 UCEs), and 95% (838 UCEs) complete data matrices, and inferred phylogenomic hypotheses under concatenation and coalescent approaches. In all cases, we recovered the monophyly of trans-Andean Hyphessobrycon inclusive of H. compressus, strong support for three species groups, and evidence of cryptic diversity within the widespread H. compressus and H. condotensis. We used our phylogenomic hypothesis to investigate the biogeographic history of Hyphessobrycon in Middle America. Our ancestral range estimation analysis suggests a single event of cis- to trans-Andean colonization followed by stepwise colonization from the Pacific slope of northwestern South America (Chocó block) to northern Middle America (Maya block). Our work supports the recognition of the trans-Andean species as Hyphessobrycon sensu stricto and provides an evolutionary template to examine morphological characters that will allow us to better understand the diversity of Hyphessobrycon in Middle America.

Spatial dynamics of Amazonian commercial fisheries: an analysis of landscape composition and fish landings

Amazonian commercial fishing is artisanal, and landings can be influenced by the flood pulse, the consumer market, the level of exploitation of species, habitat quality and vegetation cover. In this study, landscape variables and the river level were evaluated as possible drivers in the composition of catches landed in three regions of the Solimões-Amazon River. Fish landing data were collected in the upper and lower Solimões River and lower Amazon River. Fishing locations were mapped with information from fishers, civil defense departments and from the literature. Information related to river level and landscape was acquired from databases available online. Maps with the the radius of action of the fishing fleet and the quantification of landscape variables were made for periods of high and low-water, and non-metric multidimensional scaling analysis (nMDS) with catches by species, by region and hydrological period were performed. The largest operating radius of the fishing fleet was of 1,028 km and was identified in the lower Amazon River, which is probably due to the larger size of the consumer market, vessel characteristics and level of exploitation of the species near the landing center. The proportion of vegetation cover was reduced from 87% in the upper stretches of the Solimões River to 46% in the lower stretches. The upper and lower Solimões River regions presented a greater variety of species in the composition of landings. It was identified that the composition of landings between the three analyzed regions possibly varied according to the availability of habitats, indicating the importance of landscape variables for fish landings.

The consumption of fish by the riverine population of the lower Solimões River, Amazonas, Brazil

The riverine population of the Amazon Basin are among the largest consumers of fish in the world, but the consumption patterns could be regionally distinct. Moreover, their total fish catches are not fully known. The objective of this work was to estimate the per capita fish consumption of the riverine people that inhabit the Paciência Island (Iranduba, Amazonas), where there is a fishing agreement in force. A total of 273 questionnaires were applied during the first two weeks of each month between April 2021 and March 2022. The sample unit was the residences. The questionnaire contained questions about the species captured and their quantities. Consumption was calculated by dividing the average monthly capture with the average number of residents per household interviewed, which was multiplied by the number of questionnaires applied. Thirty groups of consumed fish species belonging to 17 families and 5 orders were recorded. The total catch was 3,388.35 kg and the highest monthly catch was 602.60 kg during the falling-water season in October. Daily per capita fish consumption averaged 66.13 ± 29.21 g/day, with a peak of 116.45 g/day during the falling-water season in August. The high fish consumption rate highlighted the importance of fisheries management to food security and the maintenance of the community's lifestyle.

A new species of Geophagus (Teleostei: Cichlidae): Naming a cichlid species widely known in the aquarium hobby as 'Geophagus sp. Tapajos red head'

A new species of Geophagus sensu stricto is described from the Tapajos River basin, Brazil, elevating the number of species of the genus to 21. The new species is of commercial importance and is known in the aquarist trade as Geophagus 'red head'. The new species is diagnosed using an integrative approach, based on mitochondrial DNA analysis along with morphological evidence. The new species is distinguished from all congeners by the absence of markings on the head, the bar pattern composed by nine vertical bars on the flanks and the presence of distinct longitudinal bands in the caudal fin. Additionally, it shows a genetic distance of at least 2.0% in cytochrome b gene sequences from its closest congeners. Molecular analysis including most genera of Cichlidae from South America corroborates that the new species belongs to the group of Geophagus sensu stricto.

Lista de especies de peces de la cuenca del Río Ucayali, Perú

En este trabajo se presenta una lista actualizada de los registros de especies de peces de la cuenca del río Ucayali, Perú, provenientes de datos publicados y no publicados. Los resultados muestran que la cuenca del Ucayali presenta una ictiofauna rica y diversificada con el registro de 734 especies distribuidas en 15 órdenes, 49 familias y 292 géneros. La Ictiofauna está compuesta por peces miniatura (4%), peces pequeños (39%), medianos (41%), grandes (13%) y gigantes (3%). Los grupos dominantes son los Characiformes (312 especies, 43.0 %), Siluriformes (270 especies, 36.8%), Gymnotiformes (51 especies, 6.9%), y Cichliformes (50 especies, 6.8%). Parte de la ictiofauna es compartida con cuencas adyacentes como Marañón, y Amazonas peruano, principalmente en la región de confluencia, lo que contribuye a la notable diversidad de peces en la cuenca. Se observó una alta riqueza de especies con distribución restricta de los géneros Orestias, Astroblepus, Trichomycterus, Hemibrycon, entre otras especies, que ocurren en la región de cabeceras. Estimativos de riqueza de especies considerando su distribución por cada 100 m de altitud, indican que la cuenca del Ucayali esta subestimada, esperándose encontrar hasta 1125 especies. Los resultados aquí presentados son antecedentes que coadyuvaran a la toma de decisiones con fines de conservación y desarrollo sustentable en la región amazónica.

An integrative approach method reveals the presence of a previously unreported species of Imparfinis Eigenmann and Norris 1900 (Siluriformes: Heptapteridae) in Argentina

Specimens of Imparfinis were recently collected in north-western Argentina from the Bermejo River basin (Salta and Jujuy Provinces), del Valle River (Salta Province) and Horcones River (Santiago del Estero Province). An integrative approach to taxonomy, combining a detailed morphological study and molecular phylogenetic analyses, was applied to determine the species identity of these specimens. A principal components analysis of morphological data clustered the specimens from north-western Argentina and from the Amazon basin, indicating a close morphological resemblance. Also, a molecular phylogenetic analysis showed populations of I. guttatus from Argentina and Peru forming a clade. According to the conducted haplotype network analysis these populations are distinct in two mutations. Thus, in the absence of morphological or molecular data indicating the contrary, the combined method supports the identity of the specimens from the tributaries of the Paraguay River in Argentina as I. guttatus, whose type locality is in the upper Beni River basin in Bolivia. This contribution is also the first record for this species from Argentina. The disjunct distribution of I. guttatus provides new evidence reinforcing the hypothesis for the origin of the Paraguayan ichthyofauna. We also provide an approach to the phylogenetic relationships of Imparfinis in Heptapteridae.

Composition and structure of the parasitic fauna of Hypostomus spp. (Loricariidae: Hypostominae) from a Neotropical river in Brazil

Hypostomus are abundant in Brazilian rivers and streams. In the Ivaí River, the loricariids represent 20.3% of the total species of the basin. Of these 13 species belong to Hypostomus. However, to date, there are no studies on these fish parasitic fauna. Thus, this research aimed to analyze the distribution of the parasitic infracommunity of six species of Hypostomus from the Ivaí River and investigate how the infracommunity is structured in these hosts. One hundred and twenty-eight fish were analyzed, belonging to six sympatric species of Hypostomus (Hypostomus hermanni, H. cochliodon, H. albopunctatus, H. regani, Hypostomus sp.1, and Hypostomus sp.2); of these, 92.9% were parasitized with at least one taxon, totaling 1478 specimens of parasites. The parasitic fauna was composed of the ectoparasites Trinigyrus anthus, T. carvalhoi, Unilatus unilatus (monogeneans), and Placobdella spp. (hirudinea), and the endoparasites Austrodiplostomum compactum (digenean) and Procamallanus annipetterae (nematode). The parasites exhibited similar patterns of infection in all hosts, including a low number of species, low diversity, and numerical dominance of a group of parasites. However, permutational multivariate analysis of variance (PERMANOVA) showed different parasite species compositions among the hosts. Hypostomus cochliodon and H. regani had the highest parasite richness, while Hypostomus sp.1 and Hypostomus sp.2 showed low abundance and intensity of parasitic infections. However, Hypostomus sp.1 showed the highest values of evenness, although the parasite composition in both species did not differ. The results presented herein contribute to increasing the knowledge about the parasitic fauna of Hypostomus spp. from the Ivaí River by presenting new hosts and locality records.

Global change and physiological challenges for fish of the Amazon today and in the near future

Amazonia is home to 15% (>2700, in 18 orders) of all the freshwater fish species of the world, many endemic to the region, has 65 million years of evolutionary history and accounts for 20% of all freshwater discharge to the oceans. These characteristics make Amazonia a unique region in the world. We review the geological history of the environment, its current biogeochemistry and the evolutionary forces that led to the present endemic fish species that are distributed amongst three very different water types: black waters [acidic, ion-poor, rich in dissolved organic carbon (DOC)], white waters (circumneutral, particle-rich) and clear waters (circumneutral, ion-poor, DOC-poor). The annual flood pulse is the major ecological driver for fish, providing feeding, breeding and migration opportunities, and profoundly affecting O2, CO2 and DOC regimes. Owing to climate change and other anthropogenic pressures such as deforestation, pollution and governmental mismanagement, Amazonia is now in crisis. The environment is becoming hotter and drier, and more intense and frequent flood pulses are now occurring, with greater variation between high and low water levels. Current projections are that Amazon waters of the near future will be even hotter, more acidic, darker (i.e. more DOC, more suspended particles), higher in ions, higher in CO2 and lower in O2, with many synergistic effects. We review current physiological information on Amazon fish, focusing on temperature tolerance and ionoregulatory strategies for dealing with acidic and ion-poor environments. We also discuss the influences of DOC and particles on gill function, the effects of high dissolved CO2 and low dissolved O2, with emphasis on water- versus air-breathing mechanisms, and strategies for pH compensation. We conclude that future elevations in water temperature will be the most critical factor, eliminating many species. Climate change will likely favour predominantly water-breathing species with low routine metabolic rates, low temperature sensitivity of routine metabolic rates, high anaerobic capacity, high hypoxia tolerance and high thermal tolerance.

Ecological and Phenotypic Diversification after A Continental Invasion in Neotropical Freshwater Stingrays

Habitat transitions are key potential explanations for why some lineages have diversified and others have not - from Anolis lizards to Darwin's finches. The ecological ramifications of marine-to-freshwater transitions for fishes suggest evolutionary contingency: some lineages maintain their ancestral niches in novel habitats (niche conservatism), whereas others alter their ecological role. However, few studies have considered phenotypic, ecological, and lineage diversification concurrently to explore this issue. Here, we investigated the macroevolutionary history of the taxonomically and ecologically diverse Neotropical freshwater river rays (subfamily Potamotrygoninae), which invaded and diversified in the Amazon and other South American rivers during the late Oligocene to early Miocene. We generated a time-calibrated, multi-gene phylogeny for Potamotrygoninae and reconstructed evolutionary patterns of diet specialization. We measured functional morphological traits relevant for feeding and used comparative phylogenetic methods to examine how feeding morphology diversified over time. Potamotrygonine trophic and phenotypic diversity are evenly partitioned (non-overlapping) among internal clades for most of their history, until 20-16 mya, when more recent diversification suggests increasing overlap among phenotypes. Specialized piscivores (Heliotrygon and Paratrygon) evolved early in the history of freshwater stingrays, while later trophic specialization (molluscivory, insectivory, and crustacivory) evolved in the genus Potamotrygon. Potamotrygonins demonstrate ecological niche lability in diets and feeding apparatus; however, diversification has mostly been a gradual process through time. We suggest that competition is unlikely to have limited the potamotrygonine invasion and diversification in South America.

River network rearrangements promote speciation in lowland Amazonian birds

Large Amazonian rivers impede dispersal for many species, but lowland river networks frequently rearrange, thereby altering the location and effectiveness of river barriers through time. These rearrangements may promote biotic diversification by facilitating episodic allopatry and secondary contact among populations. We sequenced genome-wide markers to evaluate the histories of divergence and introgression in six Amazonian avian species complexes. We first tested the assumption that rivers are barriers for these taxa and found that even relatively small rivers facilitate divergence. We then tested whether species diverged with gene flow and recovered reticulate histories for all species, including one potential case of hybrid speciation. Our results support the hypothesis that river rearrangements promote speciation and reveal that many rainforest taxa are micro-endemic, unrecognized, and thus threatened with imminent extinction. We propose that Amazonian hyper-diversity originates partly from fine-scale barrier displacement processes-including river dynamics-which allow small populations to differentiate and disperse into secondary contact.

A new species of Hoplias malabaricus species complex (Characiformes: Erythrinidae) from the Crepori River, Amazon basin, Brazil

A new species belonging to the Hoplias malabaricus complex from the Amazon basin, Brazil, is described. The new species is characterized by 15-16 predorsal scales, 37-39 lateral-line scales, 5 scales from dorsal fin to lateral line, 38-39 vertebrae, iii-iv, 7-8 anal-fin rays, ii-iv, 12-15 caudal-fin rays, last vertical series of scales on the base of caudal-fin rays forming a straight line, 6-7 dark bands in anal fin and no distinctive dark bands or blotches on flanks. The new species is also distinguished from other congeners of the H. malabaricus species-group by means of landmark-based morphometrics and DNA Barcoding (Cytochrome c Oxidase I gene). An identification key to species of the H. malabaricus species complex is provided.

Coexistence of endemic peacock basses (Cichla) in a Neotropical reservoir (Cichlidae: Cichliformes)

Abstract Peacock basses (genus Cichla) are predatory fish widely distributed across the Amazon, where two or more species normally coexist in a same drainage. The mechanisms that allow coexistence remain poorly understood, although these species share a number of functional traits and behavioral aspects. To advance on this question, the present study compared population and functional traits of Cichla kelberi and C. piquiti, based on data collected between 2010 and 2020 in the upper section of the Lajeado Reservoir, Tocantins River. Both species were captured in all sampling sites, frequently in a same sample, but C. piquiti was far more frequent and abundant. The species used the same habitats, and co-occurred more often than expected by chance. Species had a similar diet (small-sized fish), reproductive effort, fecundity and fat accumulation, but C. piquiti showed larger body sizes, shoaling behavior, a longer reproductive period, and morphology associated with greater swimming potential. Overall, results revealed that these species coexist in the impoundment, with significant overlap in the use of habitats and food resources. Differences in other functional traits may favor their coexistence, possibly involving niche partitioning, which seem to explain the dominance of C. piquiti in the impoundment.

Natural history museums and zoological collections of São Paulo State

Abstract Scientific collections constitute a valuable source for contributions to scientific research and the training of human resources in systematics, but also other areas of biological knowledge. In this contribution, we intend to discuss these advancements in collections and the role played by FAPESP in sponsoring them, as well as a general overview of the zoological collections in São Paulo state. We also aim to stress the importance of zoological collections and the need for continuous logistic and financial support from institutions and research agencies to maintain and develop these unique repositories of biodiversity. From 1980 to the present, FAPESP supported 118 research projects focused on several areas of zoology that are directly or indirectly associated with collections. There is a constant growth in the number of projects, and the financial support provided by FAPESP through the Biota Program was paramount for the advancement of our knowledge of biodiversity in Brazil. Parallel to the scientific advances, but not less important, this support allowed curators to increase the number of specimens, and to organize, maintain and digitize them in these valuable and irreplaceable collections. Regarding the lack of new taxonomists, it is essential that FAPESP and universities in São Paulo encourage the formation of new academics in zoological groups where specialists are rare. Considering the investment provided by FAPESP, it is quite important that the institutions that benefited from these resources took greater responsibility to safeguard these collections, and they should consider including resources on their budgets to obtain safety certificates, ensuring their permanence for many generations to come. Zoological collections are a heritage of humanity and are essential not only for the improvement of our knowledge of biodiversity but also with direct applications, among other services provided by these biological resources. It is important that research and teaching institutions in São Paulo that house specimens under their care start to value more this important patrimony and this heritage, as these collections represent the most valuable testimony of our impressive biodiversity, records of our past, and windows to our future, essential to our academic, scientific, cultural and social sovereignty.

Patterns of diversification and phylogenetic structure in the dorsolateral head musculature of Neotropical electric eels (Ostariophysi: Gymnotiformes), with a myological synonymy

Abstract The present study offers a broad comparative analysis of the dorsolateral head musculature in the Gymnotiformes, with detailed descriptions and illustrations of the dorsolateral head muscles of 83 species representing combined all valid genera. Results permit a detailed assessment of primary homologies and taxonomically-relevant variation across the order. This provides the basis for a myological synonymy, which organizes 33 previously proposed names for 15 recognized muscles. Morphological variation derived from dorsolateral head musculature was coded into 56 characters. When analyzed in isolation, that set of characters results in Gymnotidae as the sister group of remaining gymnotiforms, and all other currently recognized families as monophyletic groups. In a second analysis, myological characters were concatenated with other previously proposed characters into a phenotypic matrix. Results of that analysis reveal new myological synapomorphies for nearly all taxonomic categories within Gymnotiformes. A Partitioned Bremer Support (PBS) was used to asses the significance of comparative myology in elucidating phylogenetic relationships. PBS values show strongly non-uniform distributions on the tree, with positive scores skewed towards more inclusive taxa, and negative PBS values concentrated on less inclusive clades. Our results provide background for future studies on biomechanical constraints evolved in the early stages of gymnotiform evolution.

New small-sized species of Astyanax (Characiformes: Characidae) from the upper rio Paraguai basin, Brazil, with discussion on its generic allocation

Abstract A new species of Astyanax is described from the rio Salobra, tributary of rio Cuiabá, rio Paraguai basin. The new taxon can be distinguished from its congeners by having a well-defined dark midlateral stripe on body extending from the posterior margin of the opercle to the base of middle caudal-fin rays and a single vertical elongate humeral blotch. Although the new species is described in Astyanax, some specimens present an incomplete or a discontinuous series of perforated scales in the lateral line. Therefore, a discussion on its generic allocation is presented. Comments on different patterns of coloration among dark-striped species of Astyanax are also provided. The discovery of a new species in an underwater tourist point relatively near a large urban center underscores that even fish species daily observed by hundreds of people in limpid waters may lack a formal taxonomic identity. Such finding also highlights how the megadiverse Brazilian freshwater ichthyofauna still needs efforts and investments to identify and describe new taxa.

Which fish is this? Fishers know more than 100 fish species in megadiverse tropical rivers

Ethnobiological studies on folk, common, or popular names that fishers use to identify fish can help improve fisheries monitoring and collaborations between fishers and researchers. This study investigates fishers’ knowledge (recognition, naming, and habitat use) on 115 and 119 fish species, respectively, in the Negro and Tapajos Rivers, two megadiverse rivers in the Brazilian Amazon, and investigates the relationship between such knowledge and fish importance to fisheries, fish abundance, and fish size. We also compared fishers’ perceptions on fisheries and fish abundance with literature data on fish harvests and fish sampling. We interviewed 16 fishers in 16 communities (one fisher per community, 8 communities along each river). These fishers recognized an average of 91 ± 10.4 species in the Negro River and 115 ± 7.2 species in the Tapajos River, but all fishers recognized 114 species in Negro and all species in Tapajos. The fishers’ knowledge of fish species was positively related to fishers’ perceptions on fish abundance, size, and importance to fisheries in the Negro, but only positively related to fish size in the Tapajos. Our results highlight the usefulness of fishers’ knowledge to providing data on use and cultural relevance of fish species in high diversity aquatic ecosystems.

Building knowledge to save species: 20 years of ichthyological studies in the Tocantins-Araguaia River basin

Abstract: The Tocantins-Araguaia River basin is the largest basin located entirely in the Brazilian territory. The high degree of endemism of its ichthyofauna has been revealed in several studies, with the upper Tocantins River having the largest absolute number of endemic taxa within the Amazon basin. Here we provide an accurate review of the ichthyofauna of the Tocantins-Araguaia River basin, based on collections made between 2000-2020, including an extensive list of valid fish species occurring in the basin and a discussion of the major threats to its ichthyofauna. Ichthyofauna diversity was further refined based on web searches. Protected Areas and hydropower plants were mapped using shape files or coordinates from the responsible government agencies. 751 species of fishes are currently known from the Tocantins-Araguaia River basin. A considerable increase in fish diversity knowledge occurred in the last 20 years, in parallel with significant anthropic alterations in the basin and its surroundings. Dams constructed along the basin are ranked as the major threats to ichthyofauna. Although the drainage-basin holds several conservation units and indigenous lands, they have not been sufficient to guarantee the preservation of fish species. Our compilation emphasizes that the upper Tocantins River must be considered as a priority area to preserve fish species. Some mitigation actions that may achieve satisfactory results concerning ichthyofauna conservation are proposed.

P. A new genus of armored catfish (Siluriformes: Loricariidae) from the Greater Amazon, with a review of the species and description of five new species

Abstract A new genus of Hypopopomatinae armored catfish is described from the northern portions of South America, namely the Amazon, Orinoco and Guianan coastal drainages. The new genus is diagnosed from all remaining hypoptopomatines by having the canal cheek plate on the ventral surface of the head posteriorly elongated and contacting the cleithrum, in addition to other features that distinguish the new genus from specific genera. Five new species are described and 18 species currently allocated in Parotocinclus, Hisonotus, and Curculionichthys are transferred to the new genus and rediagnosed. Parotocinclus amazonensis and P. aripuanensis are considered junior synonyms of P. britskii. The secondary sexual dimorphism of the members of the new genus is detailed and illustrated. Morphological characters are used to delimit four phenotypic groups of species that might have phylogenetic significance, which still have to be properly tested. A key to the species is offered and diagnoses, illustrations, and distribution maps are provided for all species.

Science and hobby joining forces for the discovery of three new Corydoras (Siluriformes: Callichthyidae) from the rio Tapajós basin, Brazil, with comments on Corydoras sp. CW111

Abstract An expedition crowdfunded by aquarists to a region of the Brazilian state of Pará drained by the Tapajós and Xingu river basins resulted in the capture of five species of Corydoras from the rio Jamanxim basin, a tributary to the rio Tapajós, of which three could be confirmed as new and described herein. The new species can be promptly diagnosed from their congeners by the combination of features related to color pattern and osteology. Considering the gathered information on color patterns and morphology plus field observations, the new species are considered to compose two distinct Müllerian mimicry rings, with two of them forming a mimetic pair, while the third one forms a pair with a fourth non-identified species captured in the same expedition. An identification key to the species of Corydoras from the rio Tapajós basin is also provided.

Flood pulse influence on the feeding ecology of two Amazonian auchenipterid catfishes

ABSTRACT We assessed the flood pulse effect on the diet composition, trophic niche breadth, and the amount of food intake of two Amazonian auchenipterids with different feeding strategies. Sampling was carried out quarterly (from April/2012 to January/2014) on the middle Xingu River, using gillnets. We measured specimens for standard length and total weight. The specimens’ stomachs were removed, weighed, and had their contents identified. We analyzed 360 stomachs of Auchenipterus nuchalis and 584 of Tocantinsia piresi. The diet of A. nuchalis was mainly composed of aquatic insects and crustaceans, while T. piresi fed on fruits and seeds. The diet composition of both species varied seasonally, but only T. piresi changed its trophic niche breadth in response to hydrological changes, becoming more specialist during the higher water periods (filling and flood). Both species also showed differences in their amount of food intake between hydrological periods, with A. nuchalis feeding more intensely in lower water periods (ebb and dry), while T. piresi in the higher water periods. We evidenced different responses to the hydrological periods for the related species. We emphasize that studies considering the relationship between flood pulse and feeding ecology of the organisms are essential to understanding river floodplain systems’ dynamics.

The emerald green tetra: a new restricted-range Hyphessobrycon (Characiformes: Characidae) from the upper rio Juruena, Chapada dos Parecis, Brazil

ABSTRACT A new species of Hyphessobrycon is described from the rio Mutum, a tributary of the rio Juruena, rio Tapajós basin, Brazil. The new taxon can be distinguished from its congeners by the presence of a well-defined and relatively narrow dark midlateral stripe on body, extending from head to the middle caudal-fin rays, presence of a humeral blotch, distal profile of the anal fin falcate in males, 13-16 branched anal-fin rays (vs. 17-26), and 11 or 12 horizontal scale rows around caudal peduncle. The new species shows polymorphism regarding the presence of the adipose fin, and a discussion on this type of polymorphism across the family and its systematic implications is presented.

Mapping the hidden diversity of the Geophagus sensu stricto species group (Cichlidae: Geophagini) from the Amazon basin

South American freshwater ichthyofauna is taxonomically the most diverse on the planet, yet its diversity is still vastly underestimated. The Amazon basin alone holds more than half of this diversity. The evidence of this underestimation comes from the backlog of morphologically distinct, yet undescribed forms deposited in museum collections, and from DNA-based inventories which consistently identify large numbers of divergent lineages within even well-studied species groups. In the present study, we investigated lineage diversity within the Geophagus sensu stricto species group. To achieve these objectives, we analyzed 337 individuals sampled from 77 locations within and outside the Amazon basin representing 10 nominal and six morphologically distinct but undescribed species. We sequenced the mitochondrial cytochrome c oxidase subunit I (COI) and delimited lineages using four different single-locus species discovery methods (mPTP-15 lineages; LocMin-14 lineages; bGMYC-18 lineages; and GMYC-30 lineages). The six morphologically distinct but undescribed species were also delimited by the majority of the species discovery methods. Five of these lineages are restricted to a single collection site or a watershed and their habitats are threatened by human activities such as deforestation, agricultural activities and construction of hydroelectric plants. Our results also highlight the importance of combining DNA and morphological data in biodiversity assessment studies especially in taxonomically diverse tropical biotas.

High concentrations of metals in the waters from Araguari River lower section (Amazon biome): Relationship with land use and cover, ecotoxicological effects and risks to aquatic biota

The Araguari River is one of the most important water body in the Brazilian state of Amapá. However, the quality of its waters has been deteriorating and, recently, high concentrations of metals were found in water samples collected from its lower section. Overall, we aimed to evaluate land use and cover around three sampling sites located in the Araguari River lower section and its contribution to water pollution by metals; correlate land use pattern with detected metal concentrations; assess acute toxicity using the Daphnia similis test and genotoxicity using the Danio rerio bioassay of water samples from the three sampling sites; and investigate the risks arising from metals present in waters to aquatic biota. Riparian forest around all sampling sites is fragmented owing to the expansion of pasture areas, which showed a significant positive correlation (p < 0.05) with the concentrations of Hg and Cu in water samples. Water samples from sampling sites 2 and 3 presented acute toxicity for D. similis, and the D. rerio bioassay confirmed the presence of genotoxic pollutants in the waters from all sampling sites. Our preliminary risk assessment showed that individual concentrations and the mixture of metals posed a high risk to aquatic biota. Taken together, our results demonstrate that the conversion of native forest to pastureland contributes to water contamination by metals, which contributes to the risks to aquatic biota.

The sustainable development goals in two sustainable development reserves in central amazon: achievements and challenges

The 2030 Agenda was set in 2015 by the United Nations, with 17 Sustainable Development Goals. The Amazonian riverine people are recognized as traditional communities that have their own culture and use the local natural resources of their territories in an ancestral and traditional way. The Sustainable Development Reserve is a Brazilian protected area category which aims to ensure the protection of the natural environment while allowing the residence and the use of these lands by traditional populations. This article reports and discusses the achievements and challenges of the Sustainable Development Goals in two sustainable development reserves in Central Amazonia. The goals were evaluated in the Mamirauá and Amanã Sustainable Development Reserves, due to the large research programs developed in those areas along the past 20 years. The 17 Sustainable Development Goals have a clear connection with the mission of these sustainable development reserves in Central Amazon. Despite the many achievements conquered over the years, there are many challenges yet to overcome; and while striving to achieve the goals from the 2030 Agenda, new challenges will emerge. The current main challenges to reach the Sustainable Development Goals in the Mamirauá and Amanã Sustainable Development Reserves, in Central Amazon, are connecting to the reality of rural areas.

Biogeography of curimatid fishes reveals multiple lowland-upland river transitions and differential diversification in the Neotropics (Teleostei, Curimatidae)

The Neotropics harbors a megadiverse ichthyofauna comprising over 6300 species with approximately 80% in just three taxonomic orders within the clade Characiphysi. This highly diverse group has evolved in tropical South America over tens to hundreds of millions of years influenced mostly by re-arrangements of river drainages in lowland and upland systems. In this study, we investigate patterns of spatial diversification in Neotropical freshwater fishes in the family Curimatidae, a species-rich clade of the order Characiformes. Specifically, we examined ancestral areas, dispersal events, and shifts in species richness using spatially explicit biogeographic and macroevolutionary models to determine whether lowlands-uplands serve as museums or cradles of diversification for curimatids. We used fossil information to estimate divergence times in BEAST, multiple time-stratified models of geographic range evolution in BioGeoBEARS, and alternative models of geographic state-dependent speciation and extinction in GeoHiSSE. Our results suggest that the most recent common ancestor of curimatids originated in the Late Cretaceous likely in lowland paleodrainages of northwestern South America. Dispersals from lowland to upland river basins of the Brazilian and Guiana shields occurred repeatedly across independently evolving lineages in the Cenozoic. Colonization of upland drainages was often coupled with increased rates of net diversification in species-rich genera such as Cyphocharax and Steindachnerina. Our findings demonstrate that colonization of novel aquatic environments at higher elevations is associated with an increased rate of diversification, although this pattern is clade-dependent and driven mostly by allopatric speciation. Curimatids reinforce an emerging perspective that Amazonian lowlands act as a museum by accumulating species along time, whereas the transitions to uplands stimulate higher net diversification rates and lineage diversification.

Comparative cytogenetics of Serrasalmidae (Teleostei: Characiformes): The relationship between chromosomal evolution and molecular phylogenies

Serrasalmidae has high morphological and chromosomal diversity. Based on molecular hypotheses, the family is currently divided into two subfamilies, Colossomatinae and Serrasalminae, with Serrasalminae composed of two tribes: Myleini (comprising most of pacus species) and Serrasalmini (represented by Metynnis, Catoprion, and remaining piranha’s genera). This study aimed to analyze species of the tribes Myleini (Myloplus asterias, M. lobatus, M. rubripinnis, M. schomburgki, and Tometes camunani) and Serrasalmini (Metynnis cuiaba, M. hypsauchen, and M. longipinnis) using classical and molecular cytogenetic techniques in order to understand the chromosomal evolution of the family. The four species of the genus Myloplus and T. camunani presented 2n = 58 chromosomes, while the species of Metynnis presented 2n = 62 chromosomes. The distribution of heterochromatin occurred predominantly in pericentromeric regions in all species. Tometes camunani and Myloplus spp. presented only one site with 5S rDNA. Multiple markers of 18S rDNA were observed in T. camunani, M. asterias, M. lobatus, M. rubripinnis, and M. schomburgkii. For Metynnis, however, synteny of the 18S and 5S rDNA was observed in the three species, in addition to an additional 5S marker in M. longipinnis. These data, when superimposed on the phylogeny of the family, suggest a tendency to increase the diploid chromosome number from 54 to 62 chromosomes, which occurred in a nonlinear manner and is the result of several chromosomal rearrangements. In addition, the different karyotype formulas and locations of ribosomal sequences can be used as cytotaxonomic markers and assist in the identification of species.