1
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Moritaka SS, Lebedev VS. Orientational effects in the polarized absorption spectra of molecular aggregates. J Chem Phys 2024; 160:074901. [PMID: 38364011 DOI: 10.1063/5.0188128] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2023] [Accepted: 01/23/2024] [Indexed: 02/18/2024] Open
Abstract
We present a detailed theoretical analysis of polarized absorption spectra and linear dichroism of cyanine dye aggregates whose unit cells contain two molecules. The studied threadlike ordered system with a molecular exciton delocalized along its axis can be treated as two chains of conventional molecular aggregates, rotated relative to each other at a certain angle around the aggregate axis. Our approach is based on the general formulas for the effective cross section of light absorption by a molecular aggregate and key points of the molecular exciton theory. We have developed a self-consistent theory for describing the orientational effects in the absorption and dichroic spectra of such supramolecular structures with nonplanar unit cell. It is shown that the spectral behavior of such systems exhibits considerable distinctions from that of conventional cyanine dye aggregates. They consist in the strong dependence of the relative intensities of the J- and H-type spectral bands of the aggregate with a nonplanar unit cell on the angles determining the mutual orientations of the transition dipole moments of constituting molecules and the aggregate axis as well as on the polarization direction of incident light. The derived formulas are reduced to the well-known analytical expressions in the particular case of aggregates with one molecule in the unit cell. The calculations performed within the framework of our excitonic theory combined with available vibronic theory allow us to quite reasonably explain the experimental data for the pseudoisocyanine bromide dye aggregate.
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Affiliation(s)
- S S Moritaka
- P. N. Lebedev Physical Institute of Russian Academy of Sciences, 53 Leninskiy Prosp., 119991 Moscow, Russian Federation
| | - V S Lebedev
- P. N. Lebedev Physical Institute of Russian Academy of Sciences, 53 Leninskiy Prosp., 119991 Moscow, Russian Federation
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2
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González-Sánchez M, Mayoral MJ, Vázquez-González V, Paloncýová M, Sancho-Casado I, Aparicio F, de Juan A, Longhi G, Norman P, Linares M, González-Rodríguez D. Stacked or Folded? Impact of Chelate Cooperativity on the Self-Assembly Pathway to Helical Nanotubes from Dinucleobase Monomers. J Am Chem Soc 2023; 145:17805-17818. [PMID: 37531225 PMCID: PMC10436278 DOI: 10.1021/jacs.3c04773] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/08/2023] [Indexed: 08/04/2023]
Abstract
Self-assembled nanotubes exhibit impressive biological functions that have always inspired supramolecular scientists in their efforts to develop strategies to build such structures from small molecules through a bottom-up approach. One of these strategies employs molecules endowed with self-recognizing motifs at the edges, which can undergo either cyclization-stacking or folding-polymerization processes that lead to tubular architectures. Which of these self-assembly pathways is ultimately selected by these molecules is, however, often difficult to predict and even to evaluate experimentally. We show here a unique example of two structurally related molecules substituted with complementary nucleobases at the edges (i.e., G:C and A:U) for which the supramolecular pathway taken is determined by chelate cooperativity, that is, by their propensity to assemble in specific cyclic structures through Watson-Crick pairing. Because of chelate cooperativities that differ in several orders of magnitude, these molecules exhibit distinct supramolecular scenarios prior to their polymerization that generate self-assembled nanotubes with different internal monomer arrangements, either stacked or coiled, which lead at the same time to opposite helicities and chiroptical properties.
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Affiliation(s)
- Marina González-Sánchez
- Nanostructured
Molecular Systems and Materials Group, Organic Chemistry Department, Universidad Autónoma de Madrid, 28049 Madrid, Spain
| | - María J. Mayoral
- Department
of Inorganic Chemistry, Universidad Complutense
de Madrid, 28040 Madrid, Spain
| | - Violeta Vázquez-González
- Nanostructured
Molecular Systems and Materials Group, Organic Chemistry Department, Universidad Autónoma de Madrid, 28049 Madrid, Spain
| | - Markéta Paloncýová
- Division
of Theoretical Chemistry and Biology, School of Engineering Sciences
in Chemistry, Biotechnology and Health, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
- Regional
Centre of Advanced Technologies and Materials, Czech Advanced Technology and Research Institute (CATRIN), Palacký
University Olomouc, 779 00 Olomouc, Czech Republic
| | - Irene Sancho-Casado
- Nanostructured
Molecular Systems and Materials Group, Organic Chemistry Department, Universidad Autónoma de Madrid, 28049 Madrid, Spain
| | - Fátima Aparicio
- Nanostructured
Molecular Systems and Materials Group, Organic Chemistry Department, Universidad Autónoma de Madrid, 28049 Madrid, Spain
| | - Alberto de Juan
- Nanostructured
Molecular Systems and Materials Group, Organic Chemistry Department, Universidad Autónoma de Madrid, 28049 Madrid, Spain
| | - Giovanna Longhi
- Department
of Molecular and Translational Medicine, University of Brescia, Viale Europa 11, 25123 Brescia, Italy
| | - Patrick Norman
- Division
of Theoretical Chemistry and Biology, School of Engineering Sciences
in Chemistry, Biotechnology and Health, KTH Royal Institute of Technology, SE-100 44 Stockholm, Sweden
| | - Mathieu Linares
- Laboratory
of Organic Electronics and Scientific Visualization Group, ITN, Campus
Norrköping; Swedish e-Science Research Centre (SeRC), Linköping University, 58183 Linköping, Sweden
| | - David González-Rodríguez
- Nanostructured
Molecular Systems and Materials Group, Organic Chemistry Department, Universidad Autónoma de Madrid, 28049 Madrid, Spain
- Institute
for Advanced Research in Chemical Sciences (IAdChem), Universidad
Autónoma de Madrid, 28049 Madrid, Spain
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3
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Nazari N, Bernard S, Fortin D, Marmin T, Gendron L, Dory YL. Triple Thorpe-Ingold Effect in the Synthesis of 18-Membered C 3 Symmetric Lactams Stacking as Endless Supramolecular Tubes. Chemistry 2023; 29:e202203717. [PMID: 36469732 DOI: 10.1002/chem.202203717] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2022] [Revised: 12/01/2022] [Accepted: 12/02/2022] [Indexed: 12/12/2022]
Abstract
Three C3 symmetric macrolactams were very efficiently cyclized from their linear precursors. Adequately located substituents are responsible for the enhancement of reactivity that is not observed in the unsubstituted parent. DFT calculations show that the properly folded cyclization precursor, the reactive conformer, is more populated than other conformers, leading to a decrease of free energy of activation. The crystal structure of the ring substituted with three very bulky esters indicates that tubular stacking is preserved.
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Affiliation(s)
- Niousha Nazari
- Laboratoire de Synthèse Supramoléculaire Département de Chimie, Université de Sherbrooke 2500, boulevard Université, Sherbrooke, Québec, J1K 2R1, Canada.,Institut de Pharmacologie et Centre de Recherche du CHUS, Université de Sherbrooke 3001, 12e avenue nord, Sherbrooke, Québec, J1H 5N4, Canada
| | - Sylvain Bernard
- Laboratoire de Synthèse Supramoléculaire Département de Chimie, Université de Sherbrooke 2500, boulevard Université, Sherbrooke, Québec, J1K 2R1, Canada.,Institut de Pharmacologie et Centre de Recherche du CHUS, Université de Sherbrooke 3001, 12e avenue nord, Sherbrooke, Québec, J1H 5N4, Canada
| | - Daniel Fortin
- Laboratoire de cristallographie, Université de Sherbrooke 2500, boulevard Université, Sherbrooke, Québec, J1K 2R1, Canada
| | - Thomas Marmin
- Laboratoire de Synthèse Supramoléculaire Département de Chimie, Université de Sherbrooke 2500, boulevard Université, Sherbrooke, Québec, J1K 2R1, Canada.,Institut de Pharmacologie et Centre de Recherche du CHUS, Université de Sherbrooke 3001, 12e avenue nord, Sherbrooke, Québec, J1H 5N4, Canada
| | - Louis Gendron
- Département de Pharmacologie-Biophysique 3001, 12e avenue nord, Sherbrooke, Québec, J1H 5N4, Canada.,Institut de Pharmacologie et Centre de Recherche du CHUS, Université de Sherbrooke 3001, 12e avenue nord, Sherbrooke, Québec, J1H 5N4, Canada
| | - Yves L Dory
- Laboratoire de Synthèse Supramoléculaire Département de Chimie, Université de Sherbrooke 2500, boulevard Université, Sherbrooke, Québec, J1K 2R1, Canada.,Institut de Pharmacologie et Centre de Recherche du CHUS, Université de Sherbrooke 3001, 12e avenue nord, Sherbrooke, Québec, J1H 5N4, Canada
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4
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Ogawa S. Aqueous Sugar-Based Amphiphile Systems: Recent Advances in Phase Behavior and Nanoarchitectonics. J Oleo Sci 2023; 72:489-499. [PMID: 37121675 DOI: 10.5650/jos.ess22391] [Citation(s) in RCA: 3] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 05/02/2023] Open
Abstract
Currently, numerous fascinating molecular assemblies are used in food, cosmetics, and pharmaceuticals. Sugar-based amphiphiles are representative constituents of these molecular assemblies. Despite numerous studies on these generic compounds, many aspects remain unexplored even in aqueous systems. In this review, molecular assembly studies of sugar-based amphiphiles in aqueous systems are summarized. First, recent advances in molecular assembly studies, including the glassy state of lyotropic and thermotropic liquid crystalline (LC) phases, modulated crystal phases, and coagels consisting of nanofibers of alkyl β-D-glycosides, are presented. Second, research on thermotropic LC phases under desiccated conditions of trehalose fatty acid monoesters to clarify the fundamental behaviors of the glassy state and their use as stabilizers of glass-forming surfactants for pharmaceutical applications are discussed. Several effective X-ray analytical approaches are included to identify or clarify these phenomena, unknown or unsolved for a long time. Third, a comprehensive analysis of vitamin E (tocopherol)-cyclodextrin in aqueous systems is presented. Along with these topics, the importance of investigating stabilizer-free functional components, considered minor components, is highlighted. These unveiled phenomena or concepts will contribute to the development of nanoarchitectonics covering the self-assembly and selforganization of soft molecules.
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Affiliation(s)
- Shigesaburo Ogawa
- Faculty of Bio-industry, Tokyo University of Agriculture, Hokkaido-Okhotsk Campus
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5
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Idrees S, Li Z, Fang F, He H, Majeed I, Zhang Y, Osuka A, Cao Y, Zeng Z, Li X, Jiang HW. Porphyrin nanotubes based on a hydrogen-bonded organic framework. NANOSCALE 2022; 14:14630-14635. [PMID: 36165071 DOI: 10.1039/d2nr02499c] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/16/2023]
Abstract
Tubular structures offer a wide variety of applications; therefore, designing such materials with distinct dimensions is highly desirable yet challenging. In the current report, we have demonstrated the synthesis of a one-dimensional (1D) tubular assembly comprising porphyrin nanoring subunits. The porphyrin nanoring (PNR) 2 bearing ester groups was synthesized via Pt-mediated cyclization and then hydrolyzed to obtain PNR 3 with carboxylic groups. Under optimized conditions, porphyrin nanotubes (PNTs) were formed through hydrogen bonding between the carboxylic groups of 3. The morphology investigated by both SEM and TEM displayed well-defined arrays of nanotube bundles up to several micrometers long. Small crystals of PNTs were obtained by heating a solution of 3 in DMSO. High-resolution transmission electron microscopy (HR-TEM) accompanied by selected-area electron diffraction (SAED) exhibited a line of diffractions with d-spacing values of 6.17, 3.08, 2.07, and 1.57 Å. The miller indices of these diffractions could be assigned as 300, 600, 900, and 1200, respectively, suggesting that an ordered structure of 1D PNTs has been formed.
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Affiliation(s)
- Sumra Idrees
- GDMPA Key Laboratory for Process Control and Quality Evaluation of Chiral Pharmaceuticals, School of Chemistry, South China Normal University, Guangzhou 510006, China.
| | - Zhikai Li
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen 518060, China.
| | - Fang Fang
- Instrumental Analysis Centre of Shenzhen University, Shenzhen University, Shenzhen 518060, China
| | - Huowang He
- GDMPA Key Laboratory for Process Control and Quality Evaluation of Chiral Pharmaceuticals, School of Chemistry, South China Normal University, Guangzhou 510006, China.
| | - Irfan Majeed
- GDMPA Key Laboratory for Process Control and Quality Evaluation of Chiral Pharmaceuticals, School of Chemistry, South China Normal University, Guangzhou 510006, China.
| | - Yihuan Zhang
- GDMPA Key Laboratory for Process Control and Quality Evaluation of Chiral Pharmaceuticals, School of Chemistry, South China Normal University, Guangzhou 510006, China.
| | - Atsuhiro Osuka
- Key Laboratory of the Assembly and Application of Organic Functional Molecules of Hunan Province, College of Chemistry and Chemical Engineering, Hunan Normal University, Changsha 410081, China
| | - Yan Cao
- Institute for Advanced Study (IAS), Shenzhen University, Shenzhen 518060, China.
| | - Zhuo Zeng
- GDMPA Key Laboratory for Process Control and Quality Evaluation of Chiral Pharmaceuticals, School of Chemistry, South China Normal University, Guangzhou 510006, China.
| | - Xiaopeng Li
- College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen 518060, China.
| | - Hua-Wei Jiang
- GDMPA Key Laboratory for Process Control and Quality Evaluation of Chiral Pharmaceuticals, School of Chemistry, South China Normal University, Guangzhou 510006, China.
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6
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Shen J, Ye R, Liu Z, Zeng H. Hybrid Pyridine–Pyridone Foldamer Channels as M2‐Like Artificial Proton Channels. Angew Chem Int Ed Engl 2022; 61:e202200259. [DOI: 10.1002/anie.202200259] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2022] [Indexed: 11/05/2022]
Affiliation(s)
- Jie Shen
- College of Chemistry Fuzhou University Fuzhou Fujian 350116 China
| | - Ruijuan Ye
- College of Chemistry Fuzhou University Fuzhou Fujian 350116 China
| | - Zhiwei Liu
- Department of Chemistry & Biochemistry Rowan University 201 Mullica Hill Road Glassboro NJ 08028 USA
| | - Huaqiang Zeng
- College of Chemistry Fuzhou University Fuzhou Fujian 350116 China
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7
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Shen J, Ye R, Liu Z, Zeng H. Hybrid Pyridine–Pyridone Foldamer Channels as M2‐Like Artificial Proton Channels. Angew Chem Int Ed Engl 2022. [DOI: 10.1002/ange.202200259] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Jie Shen
- College of Chemistry Fuzhou University Fuzhou Fujian 350116 China
| | - Ruijuan Ye
- College of Chemistry Fuzhou University Fuzhou Fujian 350116 China
| | - Zhiwei Liu
- Department of Chemistry & Biochemistry Rowan University 201 Mullica Hill Road Glassboro NJ 08028 USA
| | - Huaqiang Zeng
- College of Chemistry Fuzhou University Fuzhou Fujian 350116 China
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8
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Johnson C, Harwood JS, Lipton M, Chmielewski J. A refined photo‐switchable cyclic peptide scaffold for use in β‐turn activation. Pept Sci (Hoboken) 2022. [DOI: 10.1002/pep2.24265] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/09/2022]
Affiliation(s)
- Corey Johnson
- Department of Chemistry Purdue University West Lafayette Indiana USA
| | - John S. Harwood
- Department of Chemistry Purdue University West Lafayette Indiana USA
| | - Mark Lipton
- Department of Chemistry Purdue University West Lafayette Indiana USA
| | - Jean Chmielewski
- Department of Chemistry Purdue University West Lafayette Indiana USA
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9
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Suda N, Saito T, Arima H, Yagai S. Photo-modulation of supramolecular polymorphism in the self-assembly of a scissor-shaped azobenzene dyad into nanotoroids and fibers. Chem Sci 2022; 13:3249-3255. [PMID: 35414866 PMCID: PMC8926283 DOI: 10.1039/d2sc00690a] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2022] [Accepted: 02/23/2022] [Indexed: 12/16/2022] Open
Abstract
Recent advances in the research field of supramolecularly engineered dye aggregates have enabled the design of simple one-dimensional stacks such as fibers and of closed structures such as nanotoroids (nanorings). More complex and advanced supramolecular systems could potentially be designed using a molecule that is able to provide either of these distinct nanostructures under different conditions. In this study, we introduced bulky but strongly aggregating cholesterol units to a scissor-shaped azobenzene dyad framework, which affords either nanotoroids, nanotubes, or 1D fibers, depending on the substituents. This new dyad with two trans-azobenzene arms shows supramolecular polymorphism in its temperature-controlled self-assembly, leading to not only oligomeric nanotoroids as kinetic products, but also to one-dimensional fibers as thermodynamic products. This supramolecular polymorphism can also be achieved via photo-triggered self-assembly, i.e., irradiation of a monomeric solution of the dyad with two cis-azobenzene arms using strong visible light leads to the preferential formation of nanotoroids, whereas irradiation with weak visible light leads to the predominant formation of 1D fibers. This is the first example of a successful light-induced modulation of supramolecular polymorphism to produce distinctly nanostructured aggregates under isothermal conditions.
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Affiliation(s)
- Natsuki Suda
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University 1-33 Yayoi-cho, Inage-ku Chiba 263-8522 Japan
| | - Takuho Saito
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University 1-33 Yayoi-cho, Inage-ku Chiba 263-8522 Japan
| | - Hironari Arima
- Division of Advanced Science and Engineering, Graduate School of Science and Engineering, Chiba University 1-33 Yayoi-cho, Inage-ku Chiba 263-8522 Japan
| | - Shiki Yagai
- Department of Applied Chemistry and Biotechnology, Graduate School of Engineering, Chiba University 1-33 Yayoi-cho, Inage-ku Chiba 263-8522 Japan
- Institute for Global Prominent Research (IGPR), Chiba University 1-33 Yayoi-cho, Inage-ku Chiba 263-8522 Japan
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10
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Kameta N. Stimuli-Responsive Transformable Supramolecular Nanotubes. CHEM REC 2022; 22:e202200025. [PMID: 35244334 DOI: 10.1002/tcr.202200025] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2022] [Revised: 02/16/2022] [Accepted: 02/22/2022] [Indexed: 12/11/2022]
Abstract
Supramolecular nanotubes produced by self-assembly of organic molecules can have unique structural features such as a one-dimensional morphology with no branching, distinguishable inner and outer surfaces and membrane walls, or a structure that is hollow and has a high aspect ratio. Incorporation of functional groups that respond to external chemical or physical stimuli into the constituent organic molecules of supramolecular nanotubes allows us to drastically change the structure of the nanotubes by applying such stimuli. This ability affords an array of controllable approaches for the encapsulation, storage, and release of guest compounds, which is expected to be useful in the fields of physics, chemistry, biology, and medicine. In this article, I review the supramolecular nanotubes developed by our group that exhibit morphological transformations in response to pH, chemical reaction, light, temperature, or moisture.
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Affiliation(s)
- Naohiro Kameta
- Nanomaterials Research Institute, Department of Materials and Chemistry, National Institute of Advanced Industrial Science and Technology, Tsukuba Central 5, 1-1-1 Higashi, Tsukuba, Ibaraki, 305-8565, Japan
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11
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Sakurai Y, Sawada T, Serizawa T. Phosphorylase-catalyzed synthesis and self-assembled structures of cellulose oligomers in the presence of protein denaturants. Polym J 2021. [DOI: 10.1038/s41428-021-00592-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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12
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Chamorro PB, Aparicio F. Chiral nanotubes self-assembled from discrete non-covalent macrocycles. Chem Commun (Camb) 2021; 57:12712-12724. [PMID: 34749387 DOI: 10.1039/d1cc04968b] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
Many strategies have been used to construct supramolecular hollow tubes, including helical folding of oligomers, bundling of rod-like structures, rolling-up of sheets and stacking of covalent cycles. On the other hand, controlling chirality at the supramolecular level continues attracting much interest because of its implications in future applications of porous systems. This review article covers the main examples in the literature that use simple molecular structures as chiral units for precise assembly into discrete non-covalent cyclic structures that are able to form chiral supramolecular tubular systems.
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Affiliation(s)
- P B Chamorro
- Nanostructured Molecular Systems and Materials (MSMn) Group, Departamento de Química Orgánica, Facultad de Ciencias, Universidad Autónoma de Madrid, 28049 Madrid, Spain.
| | - F Aparicio
- Nanostructured Molecular Systems and Materials (MSMn) Group, Departamento de Química Orgánica, Facultad de Ciencias, Universidad Autónoma de Madrid, 28049 Madrid, Spain.
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13
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Kameta N. Stimuli-Responsive Supramolecular Nanotube Capsules. J SYN ORG CHEM JPN 2021. [DOI: 10.5059/yukigoseikyokaishi.79.730] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Affiliation(s)
- Naohiro Kameta
- Nanomaterials Research Institute, National Institute of Advanced Industrial Science and Technology
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14
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Vázquez‐González V, Mayoral MJ, Aparicio F, Martínez‐Arjona P, González‐Rodríguez D. The Role of Peripheral Amide Groups as Hydrogen-Bonding Directors in the Tubular Self-Assembly of Dinucleobase Monomers. Chempluschem 2021; 86:1087-1096. [PMID: 34185949 PMCID: PMC8457134 DOI: 10.1002/cplu.202100255] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/04/2021] [Revised: 06/11/2021] [Indexed: 11/29/2022]
Abstract
Nanotubes are a fascinating kind of self-assembled structure which have a wide interest and potential in supramolecular chemistry. We demonstrated that nanotubes of defined dimensions can be produced from dinucleobase monomers through two decoupled hierarchical cooperative processes: cyclotetramerization and supramolecular polymerization. Here we analyze the role of peripheral amide groups, which can form an array of hydrogen bonds along the tube axis, on this self-assembly process. A combination of 1 H NMR and CD spectroscopy techniques allowed us to analyze quantitatively the thermodynamics of each of these two processes separately. We found out that the presence of these amide directors is essential to guide the polymerization event and that their nature and number have a strong influence, not only on the stabilization of the stacks of macrocycles, but also on the supramolecular polymerization mechanism.
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Affiliation(s)
- Violeta Vázquez‐González
- Nanostructured Molecular Systems and Materials GroupOrganic Chemistry DepartmentScience FacultyUniversidad Autónoma de Madrid28049MadridSpain
| | - María J. Mayoral
- Nanostructured Molecular Systems and Materials GroupOrganic Chemistry DepartmentScience FacultyUniversidad Autónoma de Madrid28049MadridSpain
- Inorganic Chemistry DepartmentChemistry FacultyUniversidad Complutense de Madrid28040MadridSpain
| | - Fátima Aparicio
- Nanostructured Molecular Systems and Materials GroupOrganic Chemistry DepartmentScience FacultyUniversidad Autónoma de Madrid28049MadridSpain
| | - Paula Martínez‐Arjona
- Nanostructured Molecular Systems and Materials GroupOrganic Chemistry DepartmentScience FacultyUniversidad Autónoma de Madrid28049MadridSpain
| | - David González‐Rodríguez
- Nanostructured Molecular Systems and Materials GroupOrganic Chemistry DepartmentScience FacultyUniversidad Autónoma de Madrid28049MadridSpain
- Institute for Advanced Research in Chemical Sciences (IAdChem)Universidad Autónoma de Madrid28049MadridSpain
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15
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Siegl K, Kolik‐Shmuel L, Zhang M, Prévost S, Vishnia K, Mor A, Appavou M, Jafta CJ, Danino D, Gradzielski M. Directed Assembly of Multi-Walled Nanotubes and Nanoribbons of Amino Acid Amphiphiles Using a Layer-by-Layer Approach. Chemistry 2021; 27:6904-6910. [PMID: 33560564 PMCID: PMC8251557 DOI: 10.1002/chem.202005331] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2020] [Revised: 02/05/2021] [Indexed: 11/22/2022]
Abstract
Monodisperse unilamellar nanotubes (NTs) and nanoribbons (NRs) were transformed to multilamellar NRs and NTs in a well-defined fashion. This was done by using a step-wise approach in which self-assembled cationic amino acid amphiphile (AAA) formed the initial NTs or NRs, and added polyanion produced an intermediate coating. Successive addition of cationic AAA formed a covering AAA layer, and by repeating this layer-by-layer (LBL) procedure, multi-walled nanotubes (mwNTs) and nanoribbons were formed. This process was structurally investigated by combining small-angle neutron scattering (SANS) and cryogenic-transmission electron microscopy (cryo-TEM), confirming the multilamellar structure and the precise layer spacing. In this way the controlled formation of multi-walled suprastructures was demonstrated in a simple and reproducible fashion, which allowed to control the charge on the surface of these 1D aggregates. This pathway to 1D colloidal materials is interesting for applications in life science and creating well-defined building blocks in nanotechnology.
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Affiliation(s)
- Kathrin Siegl
- Stranski-Laboratorium für Physikalische und Theoretische ChemieInstitut für ChemieTechnische Universität BerlinStraße des 17. Juni 12410623BerlinGermany
| | - Luba Kolik‐Shmuel
- CryoEM Laboratory of Soft MatterFaculty of Biotechnology and Food EngineeringTechnion—Israel Institute of TechnologyHaifa3200003Israel
| | - Mingming Zhang
- CryoEM Laboratory of Soft MatterFaculty of Biotechnology and Food EngineeringTechnion—Israel Institute of TechnologyHaifa3200003Israel
| | - Sylvain Prévost
- Institut Max von Laue-Paul Langevin (ILL)71 avenue des Martyrs38042GrenobleFrance
| | - Kalanit Vishnia
- CryoEM Laboratory of Soft MatterFaculty of Biotechnology and Food EngineeringTechnion—Israel Institute of TechnologyHaifa3200003Israel
| | - Amram Mor
- Faculty of Biotechnology and Food EngineeringTechnion—Israel Institute of TechnologyHaifa3200003Israel
| | - Marie‐Sousai Appavou
- Forschungszentrum Jülich GmbH Jülich Centre for Neutron Science (JCNS)Heinz Maier-Leibnitz Zentrum (MLZ)Lichtenbergerstr. 185747GarchingGermany
| | - Charl J. Jafta
- Helmholtz-Zentrum Berlin für Materialien und Energie (HZB)14109BerlinGermany
| | - Dganit Danino
- CryoEM Laboratory of Soft MatterFaculty of Biotechnology and Food EngineeringTechnion—Israel Institute of TechnologyHaifa3200003Israel
- Guangdong Technion—Israel Institute of TechnologyGuangdong ProvinceShantou515063P. R. China
| | - Michael Gradzielski
- Stranski-Laboratorium für Physikalische und Theoretische ChemieInstitut für ChemieTechnische Universität BerlinStraße des 17. Juni 12410623BerlinGermany
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16
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Kameta N, Ding W, Masuda M. Effect of Glycine Position on the Inner Diameter of Supramolecular Nanotubes Consisting of Glycolipid Monolayer Membranes. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2021. [DOI: 10.1246/bcsj.20200394] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Naohiro Kameta
- Nanomaterials Research Institute, Department of Materials and Chemistry, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba Central 5, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
| | - Wuxiao Ding
- Nanomaterials Research Institute, Department of Materials and Chemistry, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba Central 5, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
| | - Mitsutoshi Masuda
- Research Institute for Sustainable Chemistry, Department of Materials and Chemistry, AIST, Tsukuba Central 5, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
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17
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Mitomo H, Ijiro K. Controlled Nanostructures Fabricated by the Self-Assembly of Gold Nanoparticles via Simple Surface Modifications. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2021. [DOI: 10.1246/bcsj.20210031] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/15/2023]
Affiliation(s)
- Hideyuki Mitomo
- Research Institute for Electronic Science (RIES), Hokkaido University, Kita 21, Nishi 10, Kita-ku, Sapporo, Hokkaido 001-0021, Japan
- Global Institution for Collaborative Research and Education (GI-CoRE), Hokkaido University, Kita 21, Nishi 11, Kita-ku, Sapporo, Hokkaido 001-0021, Japan
| | - Kuniharu Ijiro
- Research Institute for Electronic Science (RIES), Hokkaido University, Kita 21, Nishi 10, Kita-ku, Sapporo, Hokkaido 001-0021, Japan
- Global Institution for Collaborative Research and Education (GI-CoRE), Hokkaido University, Kita 21, Nishi 11, Kita-ku, Sapporo, Hokkaido 001-0021, Japan
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18
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Abstract
Different from molecular level topology, the development of supramolecular topology has been limited due to a lack of reliable synthetic methods. Here we describe a supramolecular strategy of accessing Möbius strip, a fascinating topological object featured with only a single edge and single side. Through bending and cyclization of twisted nanofibers self-assembled from chiral glutamate amphiphiles, supramolecular nano-toroids with various twist numbers were obtained. Electron microscopic techniques could clearly identify the formation of Möbius strips when twist numbers on the toroidal fibers are odd ones. Spectroscopic and morphological analysis indicates that the helicity of the Möbius strips and nano-toroids stems from the molecular chirality of glutamate molecules. Therefore, M- and P-helical Möbius strips could be formed from L- and D-amphiphiles, respectively. Our experimental results and theoretical simulations may advance the prospect of creating chiral topologically complex structures via supramolecular approach.
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19
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Affiliation(s)
- Teruyuki Komatsu
- Department of Applied Chemistry, Faculty of Science and Engineering, Chuo University, 1-13-27 Kasuga, Bunkyo-ku, Tokyo 112-8551, Japan
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20
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Ariga K, Mori T, Kitao T, Uemura T. Supramolecular Chiral Nanoarchitectonics. ADVANCED MATERIALS (DEERFIELD BEACH, FLA.) 2020; 32:e1905657. [PMID: 32191374 DOI: 10.1002/adma.201905657] [Citation(s) in RCA: 110] [Impact Index Per Article: 27.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Revised: 12/26/2019] [Indexed: 05/06/2023]
Abstract
Exploration of molecular functions and material properties based on the control of chirality would be a scientifically elegant approach. Here, the fabrication and function of chiral-featured materials from both chiral and achiral components using a supramolecular nanoarchitectonics concept are discussed. The contents are classified in to three topics: i) chiral nanoarchitectonics of rather general molecular assemblies; ii) chiral nanoarchitectonics of metal-organic frameworks (MOFs); iii) chiral nanoarchitectonics in liquid crystals. MOF structures are based on nanoscopically well-defined coordinations, while mesoscopic orientations of liquid-crystalline phases are often flexibly altered. Discussion on the effects and features in these representative materials systems with totally different natures reveals the universal importance of supramolecular chiral nanoarchitectonics. Amplification of chiral molecular information from molecules to materials-level structures and the creation of chirality from achiral components upon temporal statistic fluctuations are universal, regardless of the nature of the assemblies. These features are thus surely advantageous characteristics for a wide range of applications.
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Affiliation(s)
- Katsuhiko Ariga
- WPI-MANA, National Institute for Materials Science, 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan
| | - Taizo Mori
- WPI-MANA, National Institute for Materials Science, 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan
| | - Takashi Kitao
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan
- Department of Applied Chemistry, Graduate School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8656, Japan
| | - Takashi Uemura
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan
- Department of Applied Chemistry, Graduate School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, 113-8656, Japan
- CREST, Japan Science and Technology Agency (JST), 4-1-8 Honcho, Kawaguchi, Saitama, 332-0012, Japan
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21
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Khazi MI, Balachandra C, Shin G, Jang GH, Govindaraju T, Kim JM. Co-solvent polarity tuned thermochromic nanotubes of cyclic dipeptide-polydiacetylene supramolecular system. RSC Adv 2020; 10:35389-35396. [PMID: 35515666 PMCID: PMC9056892 DOI: 10.1039/d0ra05656a] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2020] [Accepted: 08/28/2020] [Indexed: 11/21/2022] Open
Abstract
The cooperative non-covalent interactions arising from structurally integrated multiple molecules have emerged as a powerful tool for the creation of functional supramolecular structures. Herein, we constructed cyclic dipeptide (CDP)–polydiacetylene (PDA) conjugate (CDP–DA) by introducing cyclo(l-Phe-l-Lys) to the linear 10,12-pentacosadiynoic acid. Owing to extensive hydrogen bonding characteristics, together with structural chirality of cyclo(l-Phe-l-Lys) and strong π–π stacking diacetylenic template, CDP–DA generated supramolecular nanotubes. The structural visualization using scanning and transmission electron microscopy revealed chloroform/methanol co-solvent polarity tuned morphological transformation of intrinsic lamellar assemblies into nanotubes comprising single-wall and multi-wall structure. The mechanistic understanding by X-ray diffraction patterns confirms bilayer organization in lamellar structure, which forms nanotubes via a gradual lamellar curling-to-scrolling process. The supramolecular CDP–DA nanotubes are transformed into the rigid covalently cross-linked blue-phase polydiacetylene (CDP–PDA) by UV irradiation. Very interestingly, the blue-phase nanotubes display reversible thermochromic changing temperature up to 150 °C with excellent repeatability over a dozen thermal cycles. This work provides an efficient strategy for precise morphological control and aiding the perspective for development in nanostructures for functional devices. Co-solvent controlled fabrication of thermo-responsive chromogenic nanotubes of a cyclic dipeptide–polydiacetylene supramolecular system.![]()
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Affiliation(s)
| | - Chenikkayala Balachandra
- Bioorganic Chemistry Laboratory, New Chemistry Unit, School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research Jakkur P.O. Bengaluru Karnataka 560064 India
| | - Geon Shin
- Department of Chemical Engineering, Hanyang University Seoul 04763 Korea
| | - Gang-Hee Jang
- Department of Chemical Engineering, Hanyang University Seoul 04763 Korea
| | - Thimmaiah Govindaraju
- Bioorganic Chemistry Laboratory, New Chemistry Unit, School of Advanced Materials (SAMat), Jawaharlal Nehru Centre for Advanced Scientific Research Jakkur P.O. Bengaluru Karnataka 560064 India
| | - Jong-Man Kim
- Institute of Nano Science and Technology, Hanyang University Seoul 04763 Korea .,Department of Chemical Engineering, Hanyang University Seoul 04763 Korea
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22
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Alegre‐Requena JV, Herrera RP, Díaz Díaz D. Self‐Assembly of Hollow Organic Nanotubes Driven by Arene Regioisomerism. Chempluschem 2020; 85:2372-2375. [DOI: 10.1002/cplu.202000473] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2020] [Revised: 07/28/2020] [Indexed: 11/06/2022]
Affiliation(s)
| | - Raquel P. Herrera
- Instituto de Síntesis Química y Catálisis Homogénea (ISQCH) CSIC-Universidad de Zaragoza C/ Pedro Cerbuna 12 50009 Zaragoza Spain
| | - David Díaz Díaz
- Institut für Organische Chemie Universität Regensburg Universitätsstr. 31 93040 Regensburg Germany
- Departamento de Química Orgánica Universidad de La Laguna Avda. Astrofísico Francisco Sánchez 38206 La Laguna Tenerife Spain
- Instituto Universitario de Bio-Orgánica Antonio González Universidad de La Laguna Avda. Astrofísico Francisco Sánchez 2 38206 La Laguna Tenerife Spain
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23
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Ariga K, Jia X, Song J, Hill JP, Leong DT, Jia Y, Li J. Nanoarchitektonik als ein Ansatz zur Erzeugung bioähnlicher hierarchischer Organisate. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202000802] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/12/2022]
Affiliation(s)
- Katsuhiko Ariga
- WPI Research Center for Materials Nanoarchitectonics (MANA) National Institute for Materials Science (NIMS) 1-1 Namiki Tsukuba Ibaraki 305-0044 Japan
- Graduate School of Frontier Sciences The University of Tokyo 5-1-5 Kashiwanoha Kashiwa Chiba 277-8561 Japan
| | - Xiaofang Jia
- WPI Research Center for Materials Nanoarchitectonics (MANA) National Institute for Materials Science (NIMS) 1-1 Namiki Tsukuba Ibaraki 305-0044 Japan
| | - Jingwen Song
- Graduate School of Frontier Sciences The University of Tokyo 5-1-5 Kashiwanoha Kashiwa Chiba 277-8561 Japan
| | - Jonathan P. Hill
- WPI Research Center for Materials Nanoarchitectonics (MANA) National Institute for Materials Science (NIMS) 1-1 Namiki Tsukuba Ibaraki 305-0044 Japan
| | - David Tai Leong
- Department of Chemical & Biomolecular Engineering National University of Singapore Singapore 117585 Singapur
| | - Yi Jia
- Beijing National Laboratory for Molecular Sciences (BNLMS) CAS Key Lab of Colloid, Interface and Chemical Thermodynamics Institute of Chemistry Chinese Academy of Sciences Beijing 100190 China
| | - Junbai Li
- Beijing National Laboratory for Molecular Sciences (BNLMS) CAS Key Lab of Colloid, Interface and Chemical Thermodynamics Institute of Chemistry Chinese Academy of Sciences Beijing 100190 China
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24
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Ariga K, Jia X, Song J, Hill JP, Leong DT, Jia Y, Li J. Nanoarchitectonics beyond Self-Assembly: Challenges to Create Bio-Like Hierarchic Organization. Angew Chem Int Ed Engl 2020; 59:15424-15446. [PMID: 32170796 DOI: 10.1002/anie.202000802] [Citation(s) in RCA: 115] [Impact Index Per Article: 28.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2020] [Indexed: 01/04/2023]
Abstract
Incorporation of non-equilibrium actions in the sequence of self-assembly processes would be an effective means to establish bio-like high functionality hierarchical assemblies. As a novel methodology beyond self-assembly, nanoarchitectonics, which has as its aim the fabrication of functional materials systems from nanoscopic units through the methodological fusion of nanotechnology with other scientific disciplines including organic synthesis, supramolecular chemistry, microfabrication, and bio-process, has been applied to this strategy. The application of non-equilibrium factors to conventional self-assembly processes is discussed on the basis of examples of directed assembly, Langmuir-Blodgett assembly, and layer-by-layer assembly. In particular, examples of the fabrication of hierarchical functional structures using bio-active components such as proteins or by the combination of bio-components and two-dimensional nanomaterials, are described. Methodologies described in this review article highlight possible approaches using the nanoarchitectonics concept beyond self-assembly for creation of bio-like higher functionalities and hierarchical structural organization.
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Affiliation(s)
- Katsuhiko Ariga
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan.,Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan
| | - Xiaofang Jia
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan
| | - Jingwen Song
- Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba, 277-8561, Japan
| | - Jonathan P Hill
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki, 305-0044, Japan
| | - David Tai Leong
- Department of Chemical & Biomolecular Engineering, National University of Singapore, Singapore, 117585, Singapore
| | - Yi Jia
- Beijing National Laboratory for Molecular Sciences (BNLMS), CAS Key Lab of Colloid, Interface and Chemical Thermodynamics, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, China
| | - Junbai Li
- Beijing National Laboratory for Molecular Sciences (BNLMS), CAS Key Lab of Colloid, Interface and Chemical Thermodynamics, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, China
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25
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Aparicio F, Chamorro PB, Chamorro R, Casado S, González‐Rodríguez D. Nanostructured Micelle Nanotubes Self‐Assembled from Dinucleobase Monomers in Water. Angew Chem Int Ed Engl 2020; 59:17091-17096. [DOI: 10.1002/anie.202006877] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/12/2020] [Indexed: 11/12/2022]
Affiliation(s)
- Fátima Aparicio
- Nanostructured Molecular Systems and Materials (MSMn) Group Departamento de Química Orgánica Facultad de Ciencias Universidad Autónoma de Madrid 28049 Madrid Spain
| | - Paula B. Chamorro
- Nanostructured Molecular Systems and Materials (MSMn) Group Departamento de Química Orgánica Facultad de Ciencias Universidad Autónoma de Madrid 28049 Madrid Spain
| | - Raquel Chamorro
- Nanostructured Molecular Systems and Materials (MSMn) Group Departamento de Química Orgánica Facultad de Ciencias Universidad Autónoma de Madrid 28049 Madrid Spain
| | - Santiago Casado
- IMDEA Nanociencia c/ Faraday 9, Campus de Cantoblanco 28049 Madrid Spain
| | - David González‐Rodríguez
- Nanostructured Molecular Systems and Materials (MSMn) Group Departamento de Química Orgánica Facultad de Ciencias Universidad Autónoma de Madrid 28049 Madrid Spain
- Institute for Advanced Research in Chemical Sciences (IAdChem) Universidad Autónoma de Madrid 28049 Madrid Spain
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26
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Aparicio F, Chamorro PB, Chamorro R, Casado S, González‐Rodríguez D. Nanostructured Micelle Nanotubes Self‐Assembled from Dinucleobase Monomers in Water. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202006877] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/30/2022]
Affiliation(s)
- Fátima Aparicio
- Nanostructured Molecular Systems and Materials (MSMn) Group Departamento de Química Orgánica Facultad de Ciencias Universidad Autónoma de Madrid 28049 Madrid Spain
| | - Paula B. Chamorro
- Nanostructured Molecular Systems and Materials (MSMn) Group Departamento de Química Orgánica Facultad de Ciencias Universidad Autónoma de Madrid 28049 Madrid Spain
| | - Raquel Chamorro
- Nanostructured Molecular Systems and Materials (MSMn) Group Departamento de Química Orgánica Facultad de Ciencias Universidad Autónoma de Madrid 28049 Madrid Spain
| | - Santiago Casado
- IMDEA Nanociencia c/ Faraday 9, Campus de Cantoblanco 28049 Madrid Spain
| | - David González‐Rodríguez
- Nanostructured Molecular Systems and Materials (MSMn) Group Departamento de Química Orgánica Facultad de Ciencias Universidad Autónoma de Madrid 28049 Madrid Spain
- Institute for Advanced Research in Chemical Sciences (IAdChem) Universidad Autónoma de Madrid 28049 Madrid Spain
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27
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Zapién-Castillo S, Díaz-Zavala NP, Melo-Banda JA, Schwaller D, Lamps JP, Schmutz M, Combet J, Mésini PJ. Structure of Nanotubes Self-Assembled from a Monoamide Organogelator. Int J Mol Sci 2020; 21:ijms21144960. [PMID: 32674288 PMCID: PMC7404320 DOI: 10.3390/ijms21144960] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/08/2020] [Revised: 06/30/2020] [Accepted: 07/07/2020] [Indexed: 11/24/2022] Open
Abstract
Some organic compounds are known to self-assemble into nanotubes in solutions, but the packing of the molecules into the walls of the tubes is known only in a very few cases. Herein, we study two compounds forming nanotubes in alkanes. They bear a secondary alkanamide chain linked to a benzoic acid propyl ester (HUB-3) or to a butyl ester (HUB-4). They gel alkanes for concentrations above 0.2 wt.%. The structures of these gels, studied by freeze fracture electron microscopy, exhibit nanotubes: for HUB-3 their external diameters are polydisperse with a mean value of 33.3 nm; for HUB-4, they are less disperse with a mean value of 25.6 nm. The structure of the gel was investigated by small- and wide-angle X-ray scattering. The evolution of the intensities show that the tubes are metastable and transit slowly toward crystals. The intensities of the tubes of HUB-4 feature up to six oscillations. The shape of the intensities proves the tubular structure of the aggregates, and gives a measurement of 20.6 nm for the outer diameters and 11.0 nm for the inner diameters. It also shows that the electron density in the wall of the tubes is heterogeneous and is well described by a model with three layers.
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Affiliation(s)
- Samuel Zapién-Castillo
- Centro de Investigación en Petroquímica, Tecnológico Nacional de México-Instituto Tecnológico de Ciudad Madero, Prolongación Bahía de Aldair, Ave. de las Bahías, Parque de la Pequeña y Mediana Industria, Altamira 89600, Mexico; (S.Z.-C.); (J.A.M.-B.)
| | - Nancy P. Díaz-Zavala
- Centro de Investigación en Petroquímica, Tecnológico Nacional de México-Instituto Tecnológico de Ciudad Madero, Prolongación Bahía de Aldair, Ave. de las Bahías, Parque de la Pequeña y Mediana Industria, Altamira 89600, Mexico; (S.Z.-C.); (J.A.M.-B.)
- Correspondence: (N.P.D.-Z.); (P.J.M.)
| | - José A. Melo-Banda
- Centro de Investigación en Petroquímica, Tecnológico Nacional de México-Instituto Tecnológico de Ciudad Madero, Prolongación Bahía de Aldair, Ave. de las Bahías, Parque de la Pequeña y Mediana Industria, Altamira 89600, Mexico; (S.Z.-C.); (J.A.M.-B.)
| | - Duncan Schwaller
- Institut Charles Sadron, Université de Strasbourg, CNRS, 23 rue du Loess, F-67000 Strasbourg, France; (D.S.); (J.-P.L.); (M.S.); (J.C.)
| | - Jean-Philippe Lamps
- Institut Charles Sadron, Université de Strasbourg, CNRS, 23 rue du Loess, F-67000 Strasbourg, France; (D.S.); (J.-P.L.); (M.S.); (J.C.)
| | - Marc Schmutz
- Institut Charles Sadron, Université de Strasbourg, CNRS, 23 rue du Loess, F-67000 Strasbourg, France; (D.S.); (J.-P.L.); (M.S.); (J.C.)
| | - Jérôme Combet
- Institut Charles Sadron, Université de Strasbourg, CNRS, 23 rue du Loess, F-67000 Strasbourg, France; (D.S.); (J.-P.L.); (M.S.); (J.C.)
| | - Philippe J. Mésini
- Institut Charles Sadron, Université de Strasbourg, CNRS, 23 rue du Loess, F-67000 Strasbourg, France; (D.S.); (J.-P.L.); (M.S.); (J.C.)
- International Center for Frontier Research in Chemistry, 8 allée Gaspard Monge, 67000 Strasbourg, France
- Correspondence: (N.P.D.-Z.); (P.J.M.)
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28
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Jajcevic K, Sugihara K. Lipid Nanotubes as an Organic Template for an Electrically Conductive Gold Nanostructure Network. J Phys Chem B 2020; 124:5761-5769. [PMID: 32479085 DOI: 10.1021/acs.jpcb.0c03805] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Abstract
We demonstrate an approach to fabricate a gold nanowire network that presents a macroscopic electrical conductivity based on a lipid nanotube (LNT) template with attached gold nanoparticles. The poor electrical conductivity that we have previously faced was overcome by centrifugation and resuspension of gold nanoparticle solution for removing stabilizing agents, which increased the density of gold nanoparticles on the LNTs. An additional electroless metal plating further enhanced their contacts at nanoscale. Thanks to these procedures, the sheet resistance was improved by 11 orders of magnitude. As a proof of principle, transparent conductive films were fabricated with these gold nanowires, which exhibited sheet resistance of maximum 70 Ω/□ and transmittance of 50-75% in visible light.
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Affiliation(s)
- Kristina Jajcevic
- Department of Physical Chemistry, University of Geneva, Quai Ernest Ansermet 30, 1211 Geneva 4, Switzerland
| | - Kaori Sugihara
- Department of Physical Chemistry, University of Geneva, Quai Ernest Ansermet 30, 1211 Geneva 4, Switzerland.,Institute of Industrial Science, The University of Tokyo, 4-6-1 Komaba Meguro-Ku, Tokyo 153-8505, Japan
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29
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Ghimire G, Moore MM, Leuschen R, Nagasaka S, Kameta N, Masuda M, Higgins DA, Ito T. Influences of Hydrogen Bonding-Based Stabilization of Bolaamphiphile Layers on Molecular Diffusion within Organic Nanotubes Having Inner Carboxyl Groups. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2020; 36:6145-6153. [PMID: 32396729 DOI: 10.1021/acs.langmuir.0c00556] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/11/2023]
Abstract
This paper reports molecular diffusion behavior in two bolaamphiphile-based organic nanotubes having inner carboxyl groups with different inner dimeters (10 and 20 nm) and wall structures, COOH-ONT10nm and COOH-ONT20nm, using imaging fluorescence correlation spectroscopy (imaging FCS). The results were compared to those previously obtained in a similar nanotube with inner amine groups (NH2-ONT10nm). COOH-ONT10nm, as with NH2-ONT10nm, were formed from a rolled bolaamphiphile layer incorporating triglycine moieties, whereas COOH-ONT20nm consisted of four stacks of triglycine-free bolaamphiphile layers. Imaging FCS measurements were carried out for anionic sulforhodamine B (SRB), zwitterionic/cationic rhodamine B (RB), and cationic rhodamine-123 (R123) diffusing within ONTs (1-9 μm long) at different pH (3.4-8.4) and ionic strengths (1.6-500 mM). Diffusion coefficients (D) of these dyes in the ONTs were very small (0.01-0.1 μm2/s), reflecting the significant contributions of molecule-nanotube interactions to diffusion. The D of SRB was larger at higher pH and ionic strength, indicating the essential role of electrostatic repulsion that was enhanced by the deprotonation of the inner carboxyl groups. Importantly, the D of SRB was virtually independent of nanotube inner diameter and wall structure, indicating the diffusion of the hydrophilic molecule was controlled by short time scale adsorption/desorption processes onto the inner surface. In contrast, pH effects on D were less clear for relatively hydrophobic R123 and RB, suggesting the significant contributions of non-Coulombic interactions. Interestingly, the diffusion of these molecules in COOH-ONT20nm was slower than in COOH-ONT10nm. Slower diffusion in COOH-ONT20nm was attributable to relatively efficient partitioning of the hydrophobic dyes into the bolaamphiphile layers, which was reduced in COOH-ONT10nm due to the stabilization of its layer by polyglycine-II-type hydrogen bonding networks. These results show that, by tuning the bolaamphiphile structures and their intermolecular interactions, unique environments can be created within the nanospaces for enhanced molecular separations and reactions.
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Affiliation(s)
- Govinda Ghimire
- Department of Chemistry, Kansas State University, Manhattan, Kansas 66506-0401, United States
| | - Mikaela M Moore
- Department of Chemistry, Kansas State University, Manhattan, Kansas 66506-0401, United States
| | - Rebecca Leuschen
- Department of Chemistry, Kansas State University, Manhattan, Kansas 66506-0401, United States
| | - Shinobu Nagasaka
- Department of Chemistry, Kansas State University, Manhattan, Kansas 66506-0401, United States
| | - Naohiro Kameta
- Nanomaterials Research Institute, Department of Materials and Chemistry, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba Central 5, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
| | - Mitsutoshi Masuda
- Research Institute for Sustainable Chemistry, Department of Materials and Chemistry, AIST, Tsukuba Central 5, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan
| | - Daniel A Higgins
- Department of Chemistry, Kansas State University, Manhattan, Kansas 66506-0401, United States
| | - Takashi Ito
- Department of Chemistry, Kansas State University, Manhattan, Kansas 66506-0401, United States
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30
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Shen J, Fan J, Ye R, Li N, Mu Y, Zeng H. Polypyridine‐Based Helical Amide Foldamer Channels: Rapid Transport of Water and Protons with High Ion Rejection. Angew Chem Int Ed Engl 2020. [DOI: 10.1002/ange.202003512] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/24/2022]
Affiliation(s)
- Jie Shen
- The NanoBio Lab 31 Biopolis Way, The Nanos Singapore 138669 Singapore
| | - Jingrong Fan
- School of Biological Sciences Nanyang Technological University Singapore 637551 Singapore
| | - Ruijuan Ye
- Department of Chemical and Biomolecular Engineering National University of Singapore Singapore 117585 Singapore
| | - Ning Li
- The NanoBio Lab 31 Biopolis Way, The Nanos Singapore 138669 Singapore
| | - Yuguang Mu
- School of Biological Sciences Nanyang Technological University Singapore 637551 Singapore
| | - Huaqiang Zeng
- The NanoBio Lab 31 Biopolis Way, The Nanos Singapore 138669 Singapore
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31
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Shen J, Fan J, Ye R, Li N, Mu Y, Zeng H. Polypyridine-Based Helical Amide Foldamer Channels: Rapid Transport of Water and Protons with High Ion Rejection. Angew Chem Int Ed Engl 2020; 59:13328-13334. [PMID: 32346957 DOI: 10.1002/anie.202003512] [Citation(s) in RCA: 40] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/07/2020] [Revised: 04/10/2020] [Indexed: 12/31/2022]
Abstract
Synthetic strategies that enable rapid construction of covalent organic nanotubes with an angstrom-scale tubular pore remain scarcely reported. Reported here is a remarkably simple and mild one-pot polymerization protocol, employing POCl3 as the polymerization agent. This protocol efficiently generates polypyridine amide foldamer-based covalent organic nanotubes with a 2.8 nm length at a yield of 50 %. Trapping single-file water chains in the 2.8 Å tubular cavity, rich in hydrogen-bond donors and acceptors, these tubular polypyridine ensembles rapidly and selectively transport water at a rate of 1.6×109 H2 O⋅S-1 ⋅channel-1 and protons at a speed as fast as gramicidin A, with a high rejection of ions.
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Affiliation(s)
- Jie Shen
- The NanoBio Lab, 31 Biopolis Way, The Nanos, Singapore, 138669, Singapore
| | - Jingrong Fan
- School of Biological Sciences, Nanyang Technological University, Singapore, 637551, Singapore
| | - Ruijuan Ye
- Department of Chemical and Biomolecular Engineering, National University of Singapore, Singapore, 117585, Singapore
| | - Ning Li
- The NanoBio Lab, 31 Biopolis Way, The Nanos, Singapore, 138669, Singapore
| | - Yuguang Mu
- School of Biological Sciences, Nanyang Technological University, Singapore, 637551, Singapore
| | - Huaqiang Zeng
- The NanoBio Lab, 31 Biopolis Way, The Nanos, Singapore, 138669, Singapore
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32
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Ariga K, Shrestha LK. Fullerene Nanoarchitectonics with Shape-Shifting. MATERIALS (BASEL, SWITZERLAND) 2020; 13:E2280. [PMID: 32429148 PMCID: PMC7287900 DOI: 10.3390/ma13102280] [Citation(s) in RCA: 17] [Impact Index Per Article: 4.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/22/2020] [Revised: 05/08/2020] [Accepted: 05/12/2020] [Indexed: 12/12/2022]
Abstract
This short review article introduces several examples of self-assembly-based structural formation and shape-shifting using very simple molecular units, fullerenes (C60, C70, and their derivatives), as fullerene nanoarchitectonics. Fullerene molecules are suitable units for the basic science of self-assembly because they are simple zero-dimensional objects with only a single elemental component, carbon, without any charged or interactive functional groups. In this review article, self-assembly of fullerene molecules and their shape-shifting are introduced as fullerene nanoarchitectonics. An outline and a background of fullerene nanoarchitectonics are first described, followed by various demonstrations, including fabrication of various fullerene nanostructures, such as rods on the cube, holes in the cube, interior channels in the cube, and fullerene micro-horns, and also a demonstration of a new concept, supramolecular differentiation.
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Affiliation(s)
- Katsuhiko Ariga
- International Center for Materials Nanoarchitectonics (WPI-MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba 305-0044, Japan
- Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8561, Japan
| | - Lok Kumar Shrestha
- International Center for Materials Nanoarchitectonics (WPI-MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba 305-0044, Japan
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33
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Haino T, Hirao T. Supramolecular Polymerization and Functions of Isoxazole Ring Monomers. CHEM LETT 2020. [DOI: 10.1246/cl.200031] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/18/2022]
Affiliation(s)
- Takeharu Haino
- Graduate School of Science, Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, Hiroshima 739-8526, Japan
| | - Takehiro Hirao
- Graduate School of Science, Hiroshima University, 1-3-1 Kagamiyama, Higashi-Hiroshima, Hiroshima 739-8526, Japan
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Liang X, Li L, Tang J, Komiyama M, Ariga K. Dynamism of Supramolecular DNA/RNA Nanoarchitectonics: From Interlocked Structures to Molecular Machines. BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN 2020. [DOI: 10.1246/bcsj.20200012] [Citation(s) in RCA: 63] [Impact Index Per Article: 15.8] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Affiliation(s)
- Xingguo Liang
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, P. R. China
- Laboratory for Marine Drugs and Bioproducts of Qingdao National Laboratory for Marine Science and Technology, Qingdao 266235, P. R. China
| | - Lin Li
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, P. R. China
| | - Jiaxuan Tang
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, P. R. China
| | - Makoto Komiyama
- College of Food Science and Engineering, Ocean University of China, Qingdao 266003, P. R. China
| | - Katsuhiko Ariga
- WPI-MANA, National Institute for Materials Science, 1-1 Namiki, Tsukuba, Ibaraki 305-0044, Japan
- Department of Advanced Materials Science, Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8561, Japan
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35
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Kajiki T, Komba S, Iwaura R. Supramolecular Organogelation Directed by Weak Noncovalent Interactions in Palmitoylated 1,5-Anhydro-d-Glucitol Derivatives. Chempluschem 2020; 85:701-710. [PMID: 32267103 DOI: 10.1002/cplu.202000147] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2020] [Revised: 03/19/2020] [Indexed: 01/11/2023]
Abstract
We synthesized a series of novel alicyclic compounds by modifying 1,5-anhydro-d-glucitol with two to four palmitoyl chains, and we explored their self-assembly and gelation behaviors in paraffin. The obtained organogels were studied by field emission scanning electron microscopy, atomic force microscopy, variable-temperature Fourier transform IR spectroscopy, X-ray diffraction analysis, polarized optical microscopy, and transmission spectroscopy. While all the palmitoylated derivatives spontaneously formed fibrous networks and gelated the paraffin, an acetylated derivative of 1,5-anhydro-d-glucitol did not gelatinize the solvent, thus indicating the importance of aliphatic chains for gelation. Interestingly, α- and β- d-glucopyranose with five palmitoyl chains neither gelatinized the solvent nor formed fibrous networks, thus suggesting that the absence of C-1 substitution in 1,5-anhydro-d-glucitol is important for gelation. Fourier transform IR spectroscopy suggested that the formation of weak hydrogen bonds between the carbonyl groups and the C-H groups was the driving force for formation of the supramolecular fibers and for gelation of the solvent.
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Affiliation(s)
- Takahito Kajiki
- SUNUS CO., LTD., 3-20 Nan-ei, Kagoshima, Kagoshima, 891-0196, Japan
| | - Shiro Komba
- Food Research Institute, National Agriculture and Food Research Organization, 2-1-12 Kannondai, Tsukuba, Ibaraki, 305-8642, Japan
| | - Rika Iwaura
- Food Research Institute, National Agriculture and Food Research Organization, 2-1-12 Kannondai, Tsukuba, Ibaraki, 305-8642, Japan
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36
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Shrestha RG, Maji S, Shrestha LK, Ariga K. Nanoarchitectonics of Nanoporous Carbon Materials in Supercapacitors Applications. NANOMATERIALS (BASEL, SWITZERLAND) 2020; 10:E639. [PMID: 32235393 PMCID: PMC7221662 DOI: 10.3390/nano10040639] [Citation(s) in RCA: 37] [Impact Index Per Article: 9.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/05/2020] [Revised: 03/25/2020] [Accepted: 03/26/2020] [Indexed: 01/23/2023]
Abstract
High surface area and large pore volume carbon materials having hierarchical nanoporous structure are required in high performance supercapacitors. Such nanoporous carbon materials can be fabricated from organic precursors with high carbon content, such as synthetic biomass or agricultural wastes containing cellulose, hemicellulose, and lignin. Using recently developed unique concept of materials nanoarchitectonics, high performance porous carbons with controllable surface area, pore size distribution, and hierarchy in nanoporous structure can be fabricated. In this review, we will overview the recent trends and advancements on the synthetic methods for the production of hierarchical porous carbons with one- to three-dimensional network structure with superior performance in supercapacitors applications. We highlight the promising scope of accessing nanoporous graphitic carbon materials from: (i) direct conversion of single crystalline self-assembled fullerene nanomaterials and metal organic frameworks, (ii) hard- and soft-templating routes, and (iii) the direct carbonization and/or activation of biomass or agricultural wastes as non-templating routes. We discuss the appealing points of the different synthetic carbon sources and natural precursor raw-materials derived nanoporous carbon materials in supercapacitors applications.
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Affiliation(s)
- Rekha Goswami Shrestha
- International Center for Materials Nanoarchitectonics (WPI−MANA), National Institute for Materials Science (NIMS), 1−1 Namiki, Tsukuba 305−0044, Japan; (S.M.); (L.K.S.)
| | - Subrata Maji
- International Center for Materials Nanoarchitectonics (WPI−MANA), National Institute for Materials Science (NIMS), 1−1 Namiki, Tsukuba 305−0044, Japan; (S.M.); (L.K.S.)
| | - Lok Kumar Shrestha
- International Center for Materials Nanoarchitectonics (WPI−MANA), National Institute for Materials Science (NIMS), 1−1 Namiki, Tsukuba 305−0044, Japan; (S.M.); (L.K.S.)
| | - Katsuhiko Ariga
- International Center for Materials Nanoarchitectonics (WPI−MANA), National Institute for Materials Science (NIMS), 1−1 Namiki, Tsukuba 305−0044, Japan; (S.M.); (L.K.S.)
- Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277−8561, Japan
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37
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Serizawa T, Maeda T, Sawada T. Neutralization-Induced Self-Assembly of Cellulose Oligomers into Antibiofouling Crystalline Nanoribbon Networks in Complex Mixtures. ACS Macro Lett 2020; 9:301-305. [PMID: 35648536 DOI: 10.1021/acsmacrolett.9b01008] [Citation(s) in RCA: 15] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
Abstract
Molecular self-assembly in solutions is a powerful strategy for fabricating functional architectures. Various bio(macro)molecules have been used as self-assembly components. However, structural polysaccharides, such as cellulose and chitin, have rarely been a research focus for molecular self-assembly, even though their crystalline assemblies potentially have robust physicochemical properties. Herein, we demonstrated the neutralization-induced self-assembly of cellulose oligomers into antibiofouling crystalline nanoribbon networks to produce physically cross-linked hydrogels. The self-assembly proceeded even in versatile complex mixtures, such as serum-containing cell culture media, in a controlled manner for 3D cell culture. The cultured cells grew into cell aggregates (spheroids), which were simply collected through natural filtration due to the mechanically crushable property of the crystalline nanoribbons through water flow by pipetting. We will show the potential of cellulose oligomers for biocompatible, crystalline soft materials.
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Affiliation(s)
- Takeshi Serizawa
- Department of Chemical Science and Engineering, School of Materials and Chemical Technology, Tokyo Institute of Technology, 2-12-1-H121 Ookayama, Meguro-ku, Tokyo 152-8550, Japan
| | - Tohru Maeda
- Department of Chemical Science and Engineering, School of Materials and Chemical Technology, Tokyo Institute of Technology, 2-12-1-H121 Ookayama, Meguro-ku, Tokyo 152-8550, Japan
| | - Toshiki Sawada
- Department of Chemical Science and Engineering, School of Materials and Chemical Technology, Tokyo Institute of Technology, 2-12-1-H121 Ookayama, Meguro-ku, Tokyo 152-8550, Japan
- Precursory Research for Embryonic Science and Technology, Japan Science and Technology Agency, 4-1-8 Honcho, Kawaguchi-shi, Saitama 332-0012, Japan
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38
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Saito T, Yagai S. Effect of Oligoethylene Chains on the Formation of Photoresponsive Nanotubes by Azobenzene Dyad. European J Org Chem 2020. [DOI: 10.1002/ejoc.202000019] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Affiliation(s)
- Takuho Saito
- Division of Advanced Science and Engineering; Graduate school of Science and Engineering; Chiba University; 1-33 Yayoi-cho, Inage-ku 263-8522 Chiba Japan
| | - Shiki Yagai
- Division of Advanced Science and Engineering; Graduate school of Science and Engineering; Chiba University; 1-33 Yayoi-cho, Inage-ku 263-8522 Chiba Japan
- Institute for Global Prominent Research (IGPR); Chiba University; 1-33 Yayoi-cho, Inage-ku 263-8522 Chiba Japan
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39
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Kameta N, Shimizu T. Time-controllable roll-up onset of polythiophene sheets into nanotubes that exhibit circularly polarized luminescence. NANOSCALE 2020; 12:2999-3006. [PMID: 31912065 DOI: 10.1039/c9nr08032e] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/10/2023]
Abstract
Self-assembly of a polythiophene-conjugated glycolipid exclusively produced square sheets a few micrometers on each side. Seventeen hours after the sheets were dispersed in ethanol at 25 °C, they suddenly started to roll up, and eventually they were completely transformed into nanotubes. The onset timing of the roll-up was temperature-dependent. The roll-up involved rearrangement of the molecular packing within the bilayer membranes, which was accompanied by strengthening of the intermolecular hydrogen bonds, alteration of the polythiophene aggregation mode and enhancement of supramolecular chirality due to chiral packing. The nanotubes exhibited not only strong fluorescence derived from J-type aggregation of the polythiophene aromatic moiety but also circularly polarized luminescence (CPL) originating from the left-handed helicity of the polythiophene main chain backbone. Because the CPL onset was concurrent with the sheet roll-up, the CPL onset was also able to be controlled by varying the temperature. Such delayed CPL onset has never been reported in chiral supramolecular structures, in which CPL onset and helicity inversion usually begin immediately upon application of a stimulus and then progress either quickly or gradually. Our findings can be expected to facilitate the development of new stimulus-responsive supramolecular structures that can be used for delayed-action capsules or optical switching devices.
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Affiliation(s)
- N Kameta
- Nanomaterials Research Institute, Department of Materials and Chemistry, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba Central 5, 1-1-1 Higashi, Tsukuba, Ibaraki 305-8565, Japan.
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40
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Shimizu T, Ding W, Kameta N. Soft-Matter Nanotubes: A Platform for Diverse Functions and Applications. Chem Rev 2020; 120:2347-2407. [PMID: 32013405 DOI: 10.1021/acs.chemrev.9b00509] [Citation(s) in RCA: 103] [Impact Index Per Article: 25.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/25/2022]
Abstract
Self-assembled organic nanotubes made of single or multiple molecular components can be classified into soft-matter nanotubes (SMNTs) by contrast with hard-matter nanotubes, such as carbon and other inorganic nanotubes. To date, diverse self-assembly processes and elaborate template procedures using rationally designed organic molecules have produced suitable tubular architectures with definite dimensions, structural complexity, and hierarchy for expected functions and applications. Herein, we comprehensively discuss every functions and possible applications of a wide range of SMNTs as bulk materials or single components. This Review highlights valuable contributions mainly in the past decade. Fifteen different families of SMNTs are discussed from the viewpoints of chemical, physical, biological, and medical applications, as well as action fields (e.g., interior, wall, exterior, whole structure, and ensemble of nanotubes). Chemical applications of the SMNTs are associated with encapsulating materials and sensors. SMNTs also behave, while sometimes undergoing morphological transformation, as a catalyst, template, liquid crystal, hydro-/organogel, superhydrophobic surface, and micron size engine. Physical functions pertain to ferro-/piezoelectricity and energy migration/storage, leading to the applications to electrodes or supercapacitors, and mechanical reinforcement. Biological functions involve artificial chaperone, transmembrane transport, nanochannels, and channel reactors. Finally, medical functions range over drug delivery, nonviral gene transfer vector, and virus trap.
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Affiliation(s)
- Toshimi Shimizu
- Nanomaterials Research Institute, Department of Materials and Chemistry , National Institute of Advanced Industrial Science and Technology , Tsukuba Central 5, 1-1-1 Higashi , Tsukuba , Ibaraki 305-8565 , Japan
| | - Wuxiao Ding
- Nanomaterials Research Institute, Department of Materials and Chemistry , National Institute of Advanced Industrial Science and Technology , Tsukuba Central 5, 1-1-1 Higashi , Tsukuba , Ibaraki 305-8565 , Japan
| | - Naohiro Kameta
- Nanomaterials Research Institute, Department of Materials and Chemistry , National Institute of Advanced Industrial Science and Technology , Tsukuba Central 5, 1-1-1 Higashi , Tsukuba , Ibaraki 305-8565 , Japan
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41
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Ariga K, Yamauchi Y. Nanoarchitectonics from Atom to Life. Chem Asian J 2020; 15:718-728. [PMID: 32017354 DOI: 10.1002/asia.202000106] [Citation(s) in RCA: 40] [Impact Index Per Article: 10.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2020] [Revised: 01/31/2020] [Accepted: 02/03/2020] [Indexed: 12/12/2022]
Abstract
Functional materials with rational organization cannot be directly created only by nanotechnology-related top-down approaches. For this purpose, a novel research paradigm next to nanotechnology has to be established to create functional materials on the basis of deep nanotechnology knowledge. This task can be assigned to an emerging concept, nanoarchitectonics. In the nanoarchitectonics approaches, functional materials were architected through combination of atom/molecular manipulation, organic chemical synthesis, self-assembly and related spontaneous processes, field-applied assembly, micro/nano fabrications, and bio-related processes. In this short review article, nanoarchitectonics-related approaches on materials fabrications and functions are exemplified from atom-scale to living creature level. Based on their features, unsolved problems for future developments of the nanoarchitectonics concept are finally discussed.
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Affiliation(s)
- Katsuhiko Ariga
- International Center for Materials Nanoarchitectonics MANA, National Institute for Materials Science NIMS, 1-1 Namiki, 305-0044, Tsukuba, Ibaraki, JAPAN
| | - Yusuke Yamauchi
- University of Queensland, School of Chemical Engineering, AUSTRALIA
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42
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Saito T, Yagai S. Hierarchical self-assembly of an azobenzene dyad with inverted amide connection into toroidal and tubular nanostructures. Org Biomol Chem 2020; 18:3996-3999. [DOI: 10.1039/d0ob00833h] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/21/2022]
Abstract
Inversion of the amide connectivity of an azobenzene dyad, which self-assembles into chiral toroids and nanotubes, improves the thermal stability of the assemblies, however it negatively affects supramolecular chirality.
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Affiliation(s)
- Takuho Saito
- Division of Advanced Science and Engineering
- Graduate School of Science and Engineering
- Chiba University
- Chiba 263-8522
- Japan
| | - Shiki Yagai
- Department of Applied Chemistry and Biotechnology
- Graduate School of Engineering
- Chiba University
- Chiba 263-8522
- Japan
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43
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Pizzi A, Ozores HL, Calvelo M, García‐Fandiño R, Amorín M, Demitri N, Terraneo G, Bracco S, Comotti A, Sozzani P, Bezuidenhout CX, Metrangolo P, Granja JR. Tight Xenon Confinement in a Crystalline Sandwich‐like Hydrogen‐Bonded Dimeric Capsule of a Cyclic Peptide. Angew Chem Int Ed Engl 2019. [DOI: 10.1002/ange.201906599] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
Affiliation(s)
- Andrea Pizzi
- Laboratory of Supramolecular and Bio-Nanomaterials, (SupraBioNanoLab) Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta” Politecnico di Milano 20131 Milano Italy
| | - Haxel Lionel Ozores
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Martín Calvelo
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Rebeca García‐Fandiño
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Manuel Amorín
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Nicola Demitri
- Elettra—Sincrotrone Trieste S.S. 14 Km 163.5 in Area Science Park 34149 Basovizza— Trieste Italy
| | - Giancarlo Terraneo
- Laboratory of Supramolecular and Bio-Nanomaterials, (SupraBioNanoLab) Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta” Politecnico di Milano 20131 Milano Italy
| | - Silvia Bracco
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Angiolina Comotti
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Piero Sozzani
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Charl X. Bezuidenhout
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Pierangelo Metrangolo
- Laboratory of Supramolecular and Bio-Nanomaterials, (SupraBioNanoLab) Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta” Politecnico di Milano 20131 Milano Italy
| | - Juan R. Granja
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
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44
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Co-assembly of gold nanocluster with imidazolium surfactant into ordered luminescent fibers based on aggregation induced emission strategy. J Mol Liq 2019. [DOI: 10.1016/j.molliq.2019.111275] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/07/2023]
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45
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Vázquez-González V, Mayoral MJ, Chamorro R, Hendrix MMRM, Voets IK, González-Rodríguez D. Noncovalent Synthesis of Self-Assembled Nanotubes through Decoupled Hierarchical Cooperative Processes. J Am Chem Soc 2019; 141:16432-16438. [DOI: 10.1021/jacs.9b07868] [Citation(s) in RCA: 21] [Impact Index Per Article: 4.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Violeta Vázquez-González
- Nanostructured Molecular Systems and Materials Group, Organic Chemistry Department, Universidad Autónoma de Madrid, Madrid 28049, Spain
| | - Maria J. Mayoral
- Nanostructured Molecular Systems and Materials Group, Organic Chemistry Department, Universidad Autónoma de Madrid, Madrid 28049, Spain
| | - Raquel Chamorro
- Nanostructured Molecular Systems and Materials Group, Organic Chemistry Department, Universidad Autónoma de Madrid, Madrid 28049, Spain
| | - Marco M. R. M. Hendrix
- Laboratory of Self-Organizing Soft Matter, Laboratory of Macro-Organic Chemistry, Chemical Engineering and Chemistry & Institute for Complex Molecular Systems, Eindhoven University of Technology, P.O. Box 513, Eindhoven 5600 MB, The Netherlands
| | - Ilja K. Voets
- Laboratory of Self-Organizing Soft Matter, Laboratory of Macro-Organic Chemistry, Chemical Engineering and Chemistry & Institute for Complex Molecular Systems, Eindhoven University of Technology, P.O. Box 513, Eindhoven 5600 MB, The Netherlands
| | - David González-Rodríguez
- Nanostructured Molecular Systems and Materials Group, Organic Chemistry Department, Universidad Autónoma de Madrid, Madrid 28049, Spain
- Institute for Advanced Research in Chemical Sciences (IAdChem), Campus de Cantoblanco, Madrid 28049, Spain
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46
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Pizzi A, Ozores HL, Calvelo M, García‐Fandiño R, Amorín M, Demitri N, Terraneo G, Bracco S, Comotti A, Sozzani P, Bezuidenhout CX, Metrangolo P, Granja JR. Tight Xenon Confinement in a Crystalline Sandwich‐like Hydrogen‐Bonded Dimeric Capsule of a Cyclic Peptide. Angew Chem Int Ed Engl 2019; 58:14472-14476. [PMID: 31418497 DOI: 10.1002/anie.201906599] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2019] [Revised: 08/14/2019] [Indexed: 01/21/2023]
Affiliation(s)
- Andrea Pizzi
- Laboratory of Supramolecular and Bio-Nanomaterials, (SupraBioNanoLab) Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta” Politecnico di Milano 20131 Milano Italy
| | - Haxel Lionel Ozores
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Martín Calvelo
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Rebeca García‐Fandiño
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Manuel Amorín
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
| | - Nicola Demitri
- Elettra—Sincrotrone Trieste S.S. 14 Km 163.5 in Area Science Park 34149 Basovizza— Trieste Italy
| | - Giancarlo Terraneo
- Laboratory of Supramolecular and Bio-Nanomaterials, (SupraBioNanoLab) Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta” Politecnico di Milano 20131 Milano Italy
| | - Silvia Bracco
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Angiolina Comotti
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Piero Sozzani
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Charl X. Bezuidenhout
- Department of Materials Science University of Milano Bicocca Via R. Cozzi 55 20125 Milan Italy
| | - Pierangelo Metrangolo
- Laboratory of Supramolecular and Bio-Nanomaterials, (SupraBioNanoLab) Department of Chemistry, Materials, and Chemical Engineering “Giulio Natta” Politecnico di Milano 20131 Milano Italy
| | - Juan R. Granja
- Centro Singular de Investigación en Química Biolóxica e Materiais Moleculares (CIQUS) and Departamento de Química Orgánica Universidad de Santiago de Compostela 15782 Santiago de Compostela Spain
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Maji S, Shrestha LK, Ariga K. Nanoarchitectonics for Nanocarbon Assembly and Composite. J Inorg Organomet Polym Mater 2019. [DOI: 10.1007/s10904-019-01294-x] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/09/2023]
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Ariga K, Ahn E, Park M, Kim BS. Layer-by-Layer Assembly: Recent Progress from Layered Assemblies to Layered Nanoarchitectonics. Chem Asian J 2019; 14:2553-2566. [PMID: 31172648 DOI: 10.1002/asia.201900627] [Citation(s) in RCA: 58] [Impact Index Per Article: 11.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/10/2019] [Indexed: 12/17/2022]
Abstract
As an emerging concept for the development of new materials with nanoscale features, nanoarchitectonics has received significant recent attention. Among the various approaches that have been developed in this area, the fixed-direction construction of functional materials, such as layered fabrication, offers a helpful starting point to demonstrate the huge potential of nanoarchitectonics. In particular, the combination of nanoarchitectonics with layer-by-layer (LbL) assembly and a large degree of freedom in component availability and technical applicability would offer significant benefits to the fabrication of functional materials. In this Minireview, recent progress in LbL assembly is briefly summarized. After introducing the basics of LbL assembly, recent advances in LbL research are discussed, categorized according to physical, chemical, and biological innovations, along with the fabrication of hierarchical structures. Examples of LbL assemblies with graphene oxide are also described to demonstrate the broad applicability of LbL assembly, even with a fixed material.
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Affiliation(s)
- Katsuhiko Ariga
- WPI Research Center for Materials Nanoarchitectonics (MANA), National Institute for Materials Science (NIMS), 1-1 Namiki, Tsukuba, Ibaraki Prefecture, 305-0044, Japan.,Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba Prefecture, 277-8561, Japan
| | - Eungjin Ahn
- Department of Chemistry, Yonsei University, Seoul, 03722, Republic of Korea
| | - Minju Park
- Department of Chemistry, Yonsei University, Seoul, 03722, Republic of Korea.,Department of Chemical Engineering, Ulsan National Institute of Science and Technology (UNIST), Ulsan, 44919, Republic of Korea
| | - Byeong-Su Kim
- Department of Chemistry, Yonsei University, Seoul, 03722, Republic of Korea
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Ghimire G, Espinoza R, Xu H, Nagasaka S, Kameta N, Masuda M, Higgins DA, Ito T. Diffusion Behavior of Differently Charged Molecules in Self-Assembled Organic Nanotubes Studied Using Imaging Fluorescence Correlation Spectroscopy. LANGMUIR : THE ACS JOURNAL OF SURFACES AND COLLOIDS 2019; 35:7783-7790. [PMID: 31125237 DOI: 10.1021/acs.langmuir.9b01022] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
The diffusion behavior of fluorescent molecules within bolaamphiphile-based organic nanotubes (ONTs) was systematically investigated using imaging fluorescence correlation spectroscopy (imaging FCS). Anionic sulforhodamine B, zwitterionic/cationic rhodamine B, or cationic rhodamine 123 was loaded into ONTs having cylindrical hollow structures (ca. 10 nm in inner diameter) with amine and glucose groups on the inner and outer surfaces, respectively. Wide-field fluorescence video microscopy was used to acquire imaging FCS data for dye-doped ONTs in aqueous solutions of different ionic strengths (1-500 mM) at different pH (3.4-8.4). The diffusion behavior of these dyes was discussed on the basis of their apparent diffusion coefficients ( D) that were determined by autocorrelating the time transient of fluorescence intensity at each pixel on an ONT. Molecular diffusion in the ONTs was significantly slowed by the molecule-nanotube interactions, as shown by the very small D (10-1 to 10-2 μm2/s). The pH dependence of D revealed that dye diffusion was basically controlled by electrostatic interactions associated with the protonation of the amine groups on the ONT inner surface. The pH-dependent change in D was observed over a wide pH range, possibly because of electrostatically induced variations in the p Ka of the densely packed ammonium ions on the ONT inner surface. On the other hand, the influence of ionic strength on D was relatively unclear, suggesting the involvement of non-Coulombic interactions with the ONTs in molecular diffusion. Importantly, individual ONTs of different lengths (1-5 μm) afforded similar diffusion coefficients for each type of dye at each solution condition, implying that the properties of the ONTs were uniform in terms of solute loading and release. These results highlight the characteristics of the molecular diffusion behavior within the ONTs and will help in the design of ONTs better suited for use as drug vehicles and contaminant adsorbents.
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Affiliation(s)
- Govinda Ghimire
- Department of Chemistry , Kansas State University , Manhattan , Kansas 66506-0401 , United States
| | - Roberto Espinoza
- Department of Chemistry , Kansas State University , Manhattan , Kansas 66506-0401 , United States
| | - Hao Xu
- Department of Chemistry , Kansas State University , Manhattan , Kansas 66506-0401 , United States
| | - Shinobu Nagasaka
- Department of Chemistry , Kansas State University , Manhattan , Kansas 66506-0401 , United States
| | - Naohiro Kameta
- Nanomaterials Research Institute, Department of Materials and Chemistry , National Institute of Advanced Industrial Science and Technology (AIST) , Tsukuba Central 5, 1-1-1 Higashi , Tsukuba , Ibaraki 305-8565 , Japan
| | - Mitsutoshi Masuda
- Research Institute for Sustainable Chemistry, Department of Materials and Chemistry , AIST , Tsukuba Central 5, 1-1-1 Higashi , Tsukuba , Ibaraki 305-8565 , Japan
| | - Daniel A Higgins
- Department of Chemistry , Kansas State University , Manhattan , Kansas 66506-0401 , United States
| | - Takashi Ito
- Department of Chemistry , Kansas State University , Manhattan , Kansas 66506-0401 , United States
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