1
|
Teillet C, Devillers R, Tran A, Catry T, Marti R, Dessay N, Rwagitinywa J, Restrepo J, Roux E. Exploring fine-scale urban landscapes using satellite data to predict the distribution of Aedes mosquito breeding sites. Int J Health Geogr 2024; 23:18. [PMID: 38972982 PMCID: PMC11229250 DOI: 10.1186/s12942-024-00378-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2024] [Accepted: 06/22/2024] [Indexed: 07/09/2024] Open
Abstract
BACKGROUND The spread of mosquito-transmitted diseases such as dengue is a major public health issue worldwide. The Aedes aegypti mosquito, a primary vector for dengue, thrives in urban environments and breeds mainly in artificial or natural water containers. While the relationship between urban landscapes and potential breeding sites remains poorly understood, such a knowledge could help mitigate the risks associated with these diseases. This study aimed to analyze the relationships between urban landscape characteristics and potential breeding site abundance and type in cities of French Guiana (South America), and to evaluate the potential of such variables to be used in predictive models. METHODS We use Multifactorial Analysis to explore the relationship between urban landscape characteristics derived from very high resolution satellite imagery, and potential breeding sites recorded from in-situ surveys. We then applied Random Forest models with different sets of urban variables to predict the number of potential breeding sites where entomological data are not available. RESULTS Landscape analyses applied to satellite images showed that urban types can be clearly identified using texture indices. The Multiple Factor Analysis helped identify variables related to the distribution of potential breeding sites, such as buildings class area, landscape shape index, building number, and the first component of texture indices. Models predicting the number of potential breeding sites using the entire dataset provided an R² of 0.90, possibly influenced by overfitting, but allowing the prediction over all the study sites. Predictions of potential breeding sites varied highly depending on their type, with better results on breeding sites types commonly found in urban landscapes, such as containers of less than 200 L, large volumes and barrels. The study also outlined the limitation offered by the entomological data, whose sampling was not specifically designed for this study. Model outputs could be used as input to a mosquito dynamics model when no accurate field data are available. CONCLUSION This study offers a first use of routinely collected data on potential breeding sites in a research study. It highlights the potential benefits of including satellite-based characterizations of the urban environment to improve vector control strategies.
Collapse
Affiliation(s)
- Claire Teillet
- ESPACE-DEV, Univ Montpellier, IRD, Univ Guyane, Univ Reunion, Univ Antilles, Univ Avignon, Maison de la Télédétection, 500 rue Jean‑François Breton, Montpellier Cedex, F‑34093, France.
| | - Rodolphe Devillers
- ESPACE-DEV, Univ Montpellier, IRD, Univ Guyane, Univ Reunion, Univ Antilles, Univ Avignon, Maison de la Télédétection, 500 rue Jean‑François Breton, Montpellier Cedex, F‑34093, France
| | - Annelise Tran
- CIRAD, UMR TETIS, Maison de la Télédétection, 500 rue Jean‑François Breton, Montpellier, Cedex, F‑34093, France
- TETIS, Univ Montpellier, AgroParisTech, CIRAD, CNRS, INRAE, Maison de la Télédétection, 500 rue Jean‑François Breton, Montpellier, Cedex, F‑34093, France
| | - Thibault Catry
- ESPACE-DEV, Univ Montpellier, IRD, Univ Guyane, Univ Reunion, Univ Antilles, Univ Avignon, Maison de la Télédétection, 500 rue Jean‑François Breton, Montpellier Cedex, F‑34093, France
| | - Renaud Marti
- TETIS, Univ Montpellier, AgroParisTech, CIRAD, CNRS, INRAE, Maison de la Télédétection, 500 rue Jean‑François Breton, Montpellier, Cedex, F‑34093, France
| | - Nadine Dessay
- ESPACE-DEV, Univ Montpellier, IRD, Univ Guyane, Univ Reunion, Univ Antilles, Univ Avignon, Maison de la Télédétection, 500 rue Jean‑François Breton, Montpellier Cedex, F‑34093, France
| | - Joseph Rwagitinywa
- Direction de la Démoustication, Collectivité Territoriale de Guyane (CTG), 4179 Route de Montabo, Cayenne, Guyane française, 97300, France
| | - Johana Restrepo
- Direction de la Démoustication, Collectivité Territoriale de Guyane (CTG), 4179 Route de Montabo, Cayenne, Guyane française, 97300, France
| | - Emmanuel Roux
- ESPACE-DEV, Univ Montpellier, IRD, Univ Guyane, Univ Reunion, Univ Antilles, Univ Avignon, Maison de la Télédétection, 500 rue Jean‑François Breton, Montpellier Cedex, F‑34093, France.
- International Joint laboratory Sentinela, FIOCRUZ, UnB, IRD, Maison de la Télédétection, 500 rue Jean‑François Breton, Montpellier, Cedex, F‑34093, France.
| |
Collapse
|
2
|
Lippi CA, Mundis SJ, Sippy R, Flenniken JM, Chaudhary A, Hecht G, Carlson CJ, Ryan SJ. Trends in mosquito species distribution modeling: insights for vector surveillance and disease control. Parasit Vectors 2023; 16:302. [PMID: 37641089 PMCID: PMC10463544 DOI: 10.1186/s13071-023-05912-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/17/2023] [Accepted: 08/04/2023] [Indexed: 08/31/2023] Open
Abstract
Species distribution modeling (SDM) has become an increasingly common approach to explore questions about ecology, geography, outbreak risk, and global change as they relate to infectious disease vectors. Here, we conducted a systematic review of the scientific literature, screening 563 abstracts and identifying 204 studies that used SDMs to produce distribution estimates for mosquito species. While the number of studies employing SDM methods has increased markedly over the past decade, the overwhelming majority used a single method (maximum entropy modeling; MaxEnt) and focused on human infectious disease vectors or their close relatives. The majority of regional models were developed for areas in Africa and Asia, while more localized modeling efforts were most common for North America and Europe. Findings from this study highlight gaps in taxonomic, geographic, and methodological foci of current SDM literature for mosquitoes that can guide future efforts to study the geography of mosquito-borne disease risk.
Collapse
Affiliation(s)
- Catherine A Lippi
- Quantitative Disease Ecology and Conservation (QDEC) Lab, Department of Geography, University of Florida, Gainesville, FL, 32601, USA.
- Emerging Pathogens Institute, University of Florida, Gainesville, FL, 32601, USA.
| | - Stephanie J Mundis
- Quantitative Disease Ecology and Conservation (QDEC) Lab, Department of Geography, University of Florida, Gainesville, FL, 32601, USA
| | - Rachel Sippy
- Quantitative Disease Ecology and Conservation (QDEC) Lab, Department of Geography, University of Florida, Gainesville, FL, 32601, USA
- School of Mathematics and Statistics, University of St Andrews, St Andrews, KY16 9SS, UK
| | - J Matthew Flenniken
- Quantitative Disease Ecology and Conservation (QDEC) Lab, Department of Geography, University of Florida, Gainesville, FL, 32601, USA
| | - Anusha Chaudhary
- Quantitative Disease Ecology and Conservation (QDEC) Lab, Department of Geography, University of Florida, Gainesville, FL, 32601, USA
| | - Gavriella Hecht
- Quantitative Disease Ecology and Conservation (QDEC) Lab, Department of Geography, University of Florida, Gainesville, FL, 32601, USA
- Emerging Pathogens Institute, University of Florida, Gainesville, FL, 32601, USA
| | - Colin J Carlson
- Center for Global Health Science and Security, Georgetown University Medical Center, Georgetown University, Washington, DC, USA
| | - Sadie J Ryan
- Quantitative Disease Ecology and Conservation (QDEC) Lab, Department of Geography, University of Florida, Gainesville, FL, 32601, USA.
- Emerging Pathogens Institute, University of Florida, Gainesville, FL, 32601, USA.
| |
Collapse
|
3
|
Espinosa MO, Andreo V, Paredes G, Leaplaza C, Heredia V, Periago MV, Abril M. Risk Stratification to Guide Prevention and Control Strategies for Arboviruses Transmitted by Aedes aegypti. Trop Med Infect Dis 2023; 8:362. [PMID: 37505658 PMCID: PMC10386430 DOI: 10.3390/tropicalmed8070362] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Revised: 06/14/2023] [Accepted: 07/11/2023] [Indexed: 07/29/2023] Open
Abstract
Strategies for the prevention of arboviral diseases transmitted by Aedes aegypti have traditionally focused on vector control. This remains the same to this day, despite a lack of documented evidence on its efficacy due to a lack of coverage and sustainability. The continuous growth of urban areas and generally unplanned urbanization, which favor the presence of Ae. aegypti, demand resources, both material and human, as well as logistics to effectively lower the population's risk of infection. These considerations have motivated the development of tools to identify areas with a recurrent concentration of arboviral cases during an outbreak to be able to prioritize preventive actions and optimize available resources. This study explores the existence of spatial patterns of dengue incidence in the locality of Tartagal, in northeastern Argentina, during the outbreaks that occurred between 2010 and 2020. Approximately half (50.8%) of the cases recorded during this period were concentrated in 35.9% of the urban area. Additionally, an important overlap was found between hotspot areas of dengue and chikungunya (Kendall's W = 0.92; p-value < 0.001) during the 2016 outbreak. Moreover, 65.9% of the cases recorded in 2022 were geolocalized within the hotspot areas detected between 2010 and 2020. These results can be used to generate a risk map to implement timely preventive control strategies that prioritize these areas to reduce their vulnerability while optimizing the available resources and increasing the scope of action.
Collapse
Affiliation(s)
| | - Verónica Andreo
- Instituto de Altos Estudios Espaciales Mario Gulich, UNC-CONAE, Falda del Cañete, Córdoba X5187XAC, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Godoy Cruz 2290, Buenos Aires C1425FQB, Argentina
| | - Gladys Paredes
- Hospital Juan Domingo Perón, Alberdi 855, Tartagal A4560AQI, Argentina
| | - Carlos Leaplaza
- Hospital Juan Domingo Perón, Alberdi 855, Tartagal A4560AQI, Argentina
| | - Viviana Heredia
- Hospital Juan Domingo Perón, Alberdi 855, Tartagal A4560AQI, Argentina
| | - María Victoria Periago
- Fundación Mundo Sano, Paraguay 1535, Buenos Aires C1061ABC, Argentina
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Godoy Cruz 2290, Buenos Aires C1425FQB, Argentina
| | - Marcelo Abril
- Fundación Mundo Sano, Paraguay 1535, Buenos Aires C1061ABC, Argentina
| |
Collapse
|
4
|
Yin S, Ren C, Shi Y, Hua J, Yuan HY, Tian LW. A Systematic Review on Modeling Methods and Influential Factors for Mapping Dengue-Related Risk in Urban Settings. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:ijerph192215265. [PMID: 36429980 PMCID: PMC9690886 DOI: 10.3390/ijerph192215265] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2022] [Revised: 11/11/2022] [Accepted: 11/17/2022] [Indexed: 05/12/2023]
Abstract
Dengue fever is an acute mosquito-borne disease that mostly spreads within urban or semi-urban areas in warm climate zones. The dengue-related risk map is one of the most practical tools for executing effective control policies, breaking the transmission chain, and preventing disease outbreaks. Mapping risk at a small scale, such as at an urban level, can demonstrate the spatial heterogeneities in complicated built environments. This review aims to summarize state-of-the-art modeling methods and influential factors in mapping dengue fever risk in urban settings. Data were manually extracted from five major academic search databases following a set of querying and selection criteria, and a total of 28 studies were analyzed. Twenty of the selected papers investigated the spatial pattern of dengue risk by epidemic data, whereas the remaining eight papers developed an entomological risk map as a proxy for potential dengue burden in cities or agglomerated urban regions. The key findings included: (1) Big data sources and emerging data-mining techniques are innovatively employed for detecting hot spots of dengue-related burden in the urban context; (2) Bayesian approaches and machine learning algorithms have become more popular as spatial modeling tools for predicting the distribution of dengue incidence and mosquito presence; (3) Climatic and built environmental variables are the most common factors in making predictions, though the effects of these factors vary with the mosquito species; (4) Socio-economic data may be a better representation of the huge heterogeneity of risk or vulnerability spatial distribution on an urban scale. In conclusion, for spatially assessing dengue-related risk in an urban context, data availability and the purpose for mapping determine the analytical approaches and modeling methods used. To enhance the reliabilities of predictive models, sufficient data about dengue serotyping, socio-economic status, and spatial connectivity may be more important for mapping dengue-related risk in urban settings for future studies.
Collapse
Affiliation(s)
- Shi Yin
- Faculty of Architecture, The University of Hong Kong, Pokfulam, Hong Kong SAR, China
- School of Architecture, South China University of Technology, Guangzhou 510641, China
| | - Chao Ren
- Faculty of Architecture, The University of Hong Kong, Pokfulam, Hong Kong SAR, China
- Correspondence:
| | - Yuan Shi
- Department of Geography and Planning, University of Liverpool, Liverpool L69 3BX, UK
| | - Junyi Hua
- School of International Affairs and Public Administration, Ocean University of China, Qingdao 266100, China
| | - Hsiang-Yu Yuan
- Department of Biomedical Sciences, City University of Hong Kong, Kowloon, Hong Kong SAR, China
| | - Lin-Wei Tian
- School of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong SAR, China
| |
Collapse
|
5
|
Maquart PO, Froehlich Y, Boyer S. Plastic pollution and infectious diseases. Lancet Planet Health 2022; 6:e842-e845. [PMID: 36208647 DOI: 10.1016/s2542-5196(22)00198-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2021] [Revised: 07/19/2022] [Accepted: 08/16/2022] [Indexed: 06/16/2023]
Affiliation(s)
- Pierre-Olivier Maquart
- Medical and Veterinary Entomology Unit, Institut Pasteur du Cambodge, Phnom Penh, Cambodia.
| | | | - Sebastien Boyer
- Medical and Veterinary Entomology Unit, Institut Pasteur du Cambodge, Phnom Penh, Cambodia
| |
Collapse
|
6
|
How heterogeneous is the dengue transmission profile in Brazil? A study in six Brazilian states. PLoS Negl Trop Dis 2022; 16:e0010746. [PMID: 36095004 PMCID: PMC9499305 DOI: 10.1371/journal.pntd.0010746] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2022] [Revised: 09/22/2022] [Accepted: 08/17/2022] [Indexed: 11/19/2022] Open
Abstract
Dengue is a vector-borne disease present in most tropical countries, infecting an average of 50 to 100 million people per year. Socioeconomic, demographic, and environmental factors directly influence the transmission cycle of the dengue virus (DENV). In Brazil, these factors vary between regions producing different profiles of dengue transmission and challenging the epidemiological surveillance of the disease. In this article, we aimed at classifying the profiles of dengue transmission in 1,823 Brazilian municipalities, covering different climates, from 2010 to 2019. Time series data of dengue cases were obtained from six states: Ceará and Maranhão in the semiarid Northeast, Minas Gerais in the countryside, Espírito Santo and Rio de Janeiro in the tropical Atlantic coast, and Paraná in the subtropical region. To describe the time series, we proposed a set of epi-features of the magnitude and duration of the dengue epidemic cycles, totaling 13 indicators. Using these epi-features as inputs, a multivariate cluster algorithm was employed to classify the municipalities according to their dengue transmission profile. Municipalities were classified into four distinct dengue transmission profiles: persistent transmission (7.8%), epidemic (21.3%), episodic/epidemic (43.2%), and episodic transmission (27.6%). Different profiles were associated with the municipality’s population size and climate. Municipalities with higher incidence and larger populations tended to be classified as persistent transmission, suggesting the existence of critical community size. This association, however, varies depending on the state, indicating the importance of other factors. The proposed classification is useful for developing more specific and precise surveillance protocols for regions with different dengue transmission profiles, as well as more precise public policies for dengue prevention. Dengue is one of the fastest-growing vector-borne diseases in the world. Currently, vaccines are experimental and are not very effective, so prevention depends on the control of the mosquito Aedes aegypti. Health promotion campaigns aimed at encouraging people to reduce mosquito breeding sites have limited effect. In addition, the heterogeneity of the territories that have dengue becomes a major challenge for the epidemiological surveillance of the disease. Brazil has a territory of continental size, and single standardized surveillance is not very effective for monitoring this arbovirus. Classifying types of dengue dynamics based on features of the epidemiological cycle in each location has the potential to increase the precision of surveillance and control strategies. In our study, we were able to classify areas according to different dengue transmission profiles, ranging from episodic to persistent transmission. These results can provide tools to guide actions aimed at achieving the World Health Organization’s goals of eliminating neglected tropical diseases in countries that have the virus.
Collapse
|
7
|
Andreo V, Porcasi X, Guzman C, Lopez L, Scavuzzo CM. Spatial Distribution of Aedes aegypti Oviposition Temporal Patterns and Their Relationship with Environment and Dengue Incidence. INSECTS 2021; 12:insects12100919. [PMID: 34680688 PMCID: PMC8537924 DOI: 10.3390/insects12100919] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/02/2021] [Revised: 09/21/2021] [Accepted: 09/30/2021] [Indexed: 11/17/2022]
Abstract
Simple Summary Aedes aegypti, the mosquito species that transmits dengue virus among others, is fully adapted to thrive in urban areas. Their activity, however, varies in time and space and this might imply different transmission risk. We hypothesize that the temporal differences in mosquito activity are determined by local environmental conditions. Hence, we explore the existence of groups of temporal patterns in weekly time series of ovitraps records and we associate those patterns to environmental variables derived from remote sensing data and also to dengue incidence. We found three groups of temporal patterns that showed association with land cover diversity, heterogeneity and variability in vegetation and humidity indices estimated over 50-m radius buffer areas surrounding ovitraps. Dengue incidence on a neighborhood basis showed a weak but positive association with the percentage of pixels belonging to one of the patterns detected. The understanding of the spatial distribution of temporal patterns and their environmental determinants might then become relevant to guide the allocation of prevention and monitoring interventions. Abstract Aedes aegypti, the mosquito species transmitting dengue, zika, chikungunya and yellow fever viruses, is fully adapted to thrive in urban areas. The temporal activity of this mosquito, however, varies within urban areas which might imply different transmission risk. In this work, we hypothesize that temporal differences in mosquito activity patterns are determined by local environmental conditions. Hence, we explore the existence of groups of temporal patterns in weekly time series of Ae. aegypti ovitraps records (2017–2019) by means of time series clustering. Next, with the aim of predicting risk in places with no mosquito field data, we use machine learning classification tools to assess the association of temporal patterns with environmental variables derived from satellite imagery and predict temporal patterns over the city area to finally test the relationship with dengue incidence. We found three groups of temporal patterns that showed association with land cover diversity, variability in vegetation and humidity and, heterogeneity measured by texture indices estimated over buffer areas surrounding ovitraps. Dengue incidence on a neighborhood basis showed a weak but positive association with the percentage of pixels belonging to only one of the temporal patterns detected. The understanding of the spatial distribution of temporal patterns and their environmental determinants might then become highly relevant to guide the allocation of prevention and potential interventions. Further investigation is still needed though to incorporate other determinants not considered here.
Collapse
Affiliation(s)
- Verónica Andreo
- Instituto de Altos Estudios Espaciales “Mario Gulich”, Falda del Cañete, Córdoba 5187, Argentina; (X.P.); (C.M.S.)
- Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Ciudad Autónoma de Buenos Aires C1425FQB, Argentina
- Correspondence:
| | - Ximena Porcasi
- Instituto de Altos Estudios Espaciales “Mario Gulich”, Falda del Cañete, Córdoba 5187, Argentina; (X.P.); (C.M.S.)
| | - Claudio Guzman
- Programa de Zoonosis, Área de Epidemiología, Ministerio de Salud, Córdoba 5000, Argentina; (C.G.); (L.L.)
| | - Laura Lopez
- Programa de Zoonosis, Área de Epidemiología, Ministerio de Salud, Córdoba 5000, Argentina; (C.G.); (L.L.)
| | - Carlos M. Scavuzzo
- Instituto de Altos Estudios Espaciales “Mario Gulich”, Falda del Cañete, Córdoba 5187, Argentina; (X.P.); (C.M.S.)
| |
Collapse
|
8
|
Zhou Y, Liu H, Leng P, Zhu J, Yao S, Zhu Y, Wu H. Analysis of the spatial distribution of Aedes albopictus in an urban area of Shanghai, China. Parasit Vectors 2021; 14:501. [PMID: 34565466 PMCID: PMC8474869 DOI: 10.1186/s13071-021-05022-8] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/06/2021] [Accepted: 09/14/2021] [Indexed: 11/10/2022] Open
Abstract
BACKGROUND Aedes albopictus is a vector of major arboviral diseases and a primary pest in tropical and temperate regions of China. In most cities of China, the current monitoring system for the spread of Ae. albopictus is based on the subdistrict scale and does not consider spatial distribution for analysis of species density. Thus, the system is not sufficiently accurate for epidemic investigations, especially in large cities. METHODS This study used an improved surveillance program, with the mosquito oviposition trap (MOT) method, integrating the actual monitoring locations to investigate the temporal and spatial distribution of Ae. albopictus abundance in an urban area of Shanghai, China from 2018 to 2019. A total of 133 monitoring units were selected for surveillance of Ae. albopictus density in the study area, which was composed of 14 subdistricts. The vector abundance and spatial structure of Ae. albopictus were predicted using a binomial areal kriging model based on eight MOTs in each unit. Results were compared to the light trap (LT) method of the traditional monitoring scheme. RESULTS A total of 8,192 MOTs were placed in the study area in 2018, and 7917 (96.6%) were retrieved, with a positive rate of 6.45%. In 2019, 22,715 (97.0%) of 23,408 MOTs were recovered, with a positive rate of 5.44%. Using the LT method, 273 (93.5%) and 312 (94.5%) adult female Ae. albopictus were gathered in 2018 and 2019, respectively. The Ae. albopictus populations increased slowly from May, reached a peak in July, and declined gradually from September. The MOT positivity index (MPI) showed significant positive spatial autocorrelation across the study area, whereas LT collections indicated a nonsignificant spatial autocorrelation. The MPI was suitable for spatial interpolation using the binomial areal kriging model and showed different hot spots in different years. CONCLUSIONS The improved surveillance system integrated with a geographical information system (GIS) can improve our understanding of the spatial and temporal distribution of Ae. albopictus in urban areas and provide a practical method for decision-makers to implement vector control and mosquito management.
Collapse
Affiliation(s)
- Yibin Zhou
- Department of Infectious Disease Control, Shanghai Municipal Center for Disease Control and Prevention, Shanghai, 200336 China
| | - Hongxia Liu
- Department of Infectious Disease Control, Shanghai Municipal Center for Disease Control and Prevention, Shanghai, 200336 China
| | - Peien Leng
- Department of Infectious Disease Control, Shanghai Municipal Center for Disease Control and Prevention, Shanghai, 200336 China
| | - Jiang Zhu
- Department of Infectious Disease Control, Shanghai Municipal Center for Disease Control and Prevention, Shanghai, 200336 China
| | - Shenjun Yao
- Key Laboratory of Geographic Information Science (Ministry of Education), East China Normal University, Shanghai, 200241 China
| | - Yiyi Zhu
- Department of Infectious Disease Control, Shanghai Municipal Center for Disease Control and Prevention, Shanghai, 200336 China
| | - Huanyu Wu
- Department of Infectious Disease Control, Shanghai Municipal Center for Disease Control and Prevention, Shanghai, 200336 China
| |
Collapse
|
9
|
Aguirre E, Andreo V, Porcasi X, Lopez L, Guzman C, González P, Scavuzzo CM. Implementation of a proactive system to monitor Aedes aegypti populations using open access historical and forecasted meteorological data. ECOL INFORM 2021. [DOI: 10.1016/j.ecoinf.2021.101351] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/25/2022]
|
10
|
Lorenz C, Castro MC, Trindade PMP, Nogueira ML, de Oliveira Lage M, Quintanilha JA, Parra MC, Dibo MR, Fávaro EA, Guirado MM, Chiaravalloti-Neto F. Predicting Aedes aegypti infestation using landscape and thermal features. Sci Rep 2020; 10:21688. [PMID: 33303912 PMCID: PMC7729962 DOI: 10.1038/s41598-020-78755-8] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2020] [Accepted: 11/30/2020] [Indexed: 11/15/2022] Open
Abstract
Identifying Aedes aegypti breeding hotspots in urban areas is crucial for the design of effective vector control strategies. Remote sensing techniques offer valuable tools for mapping habitat suitability. In this study, we evaluated the association between urban landscape, thermal features, and mosquito infestations. Entomological surveys were conducted between 2016 and 2019 in Vila Toninho, a neighborhood of São José do Rio Preto, São Paulo, Brazil, in which the numbers of adult female Ae. aegypti were recorded monthly and grouped by season for three years. We used data from 2016 to 2018 to build the model and data from summer of 2019 to validate it. WorldView-3 satellite images were used to extract land cover classes, and land surface temperature data were obtained using the Landsat-8 Thermal Infrared Sensor (TIRS). A multilevel negative binomial model was fitted to the data, which showed that the winter season has the greatest influence on decreases in mosquito abundance. Green areas and pavements were negatively associated, and a higher cover of asbestos roofs and exposed soil was positively associated with the presence of adult females. These features are related to socio-economic factors but also provide favorable breeding conditions for mosquitos. The application of remote sensing technologies has significant potential for optimizing vector control strategies, future mosquito suppression, and outbreak prediction.
Collapse
Affiliation(s)
- Camila Lorenz
- Department of Epidemiology, School of Public Health - University of Sao Paulo, Av. Dr. Arnaldo, São Paulo, SP, 715, Brazil.
| | - Marcia C Castro
- Department of Global Health and Population, Harvard T.H. Chan School of Public Health, Boston, MA, USA
| | - Patricia M P Trindade
- Southern Regional Centre of the National Institute for Space Research (INPE), Santa Maria, RS, Brazil
| | - Maurício L Nogueira
- Virology Research Laboratory, Faculty of Medicine of São José do Rio Preto, São José do Rio Preto, SP, Brazil
| | - Mariana de Oliveira Lage
- Scientific Division of Management, Environmental Science and Technology of the Institute of Energy and Environment - IEE of University of Sao Paulo, São Paulo, SP, Brazil
| | - José A Quintanilha
- Scientific Division of Management, Environmental Science and Technology of the Institute of Energy and Environment - IEE of University of Sao Paulo, São Paulo, SP, Brazil
| | - Maisa C Parra
- Virology Research Laboratory, Faculty of Medicine of São José do Rio Preto, São José do Rio Preto, SP, Brazil
| | - Margareth R Dibo
- Entomology Laboratory, Endemics Control Superintendence, São Paulo, SP, Brazil
| | - Eliane A Fávaro
- Virology Research Laboratory, Faculty of Medicine of São José do Rio Preto, São José do Rio Preto, SP, Brazil
| | - Marluci M Guirado
- Vectors Laboratory, Endemics Control Superintendence, São José do Rio Preto, SP, Brazil
| | - Francisco Chiaravalloti-Neto
- Department of Epidemiology, School of Public Health - University of Sao Paulo, Av. Dr. Arnaldo, São Paulo, SP, 715, Brazil
| |
Collapse
|
11
|
Li Z, Gurgel H, Dessay N, Hu L, Xu L, Gong P. Semi-Supervised Text Classification Framework: An Overview of Dengue Landscape Factors and Satellite Earth Observation. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2020; 17:E4509. [PMID: 32585932 PMCID: PMC7344967 DOI: 10.3390/ijerph17124509] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/01/2020] [Revised: 06/17/2020] [Accepted: 06/18/2020] [Indexed: 12/29/2022]
Abstract
In recent years there has been an increasing use of satellite Earth observation (EO) data in dengue research, in particular the identification of landscape factors affecting dengue transmission. Summarizing landscape factors and satellite EO data sources, and making the information public are helpful for guiding future research and improving health decision-making. In this case, a review of the literature would appear to be an appropriate tool. However, this is not an easy-to-use tool. The review process mainly includes defining the topic, searching, screening at both title/abstract and full-text levels and data extraction that needs consistent knowledge from experts and is time-consuming and labor intensive. In this context, this study integrates the review process, text scoring, active learning (AL) mechanism, and bidirectional long short-term memory (BiLSTM) networks, and proposes a semi-supervised text classification framework that enables the efficient and accurate selection of the relevant articles. Specifically, text scoring and BiLSTM-based active learning were used to replace the title/abstract screening and full-text screening, respectively, which greatly reduces the human workload. In this study, 101 relevant articles were selected from 4 bibliographic databases, and a catalogue of essential dengue landscape factors was identified and divided into four categories: land use (LU), land cover (LC), topography and continuous land surface features. Moreover, various satellite EO sensors and products used for identifying landscape factors were tabulated. Finally, possible future directions of applying satellite EO data in dengue research in terms of landscape patterns, satellite sensors and deep learning were proposed. The proposed semi-supervised text classification framework was successfully applied in research evidence synthesis that could be easily applied to other topics, particularly in an interdisciplinary context.
Collapse
Affiliation(s)
- Zhichao Li
- Ministry of Education Key Laboratory for Earth System Modeling, Department of Earth System, Science, Tsinghua University, Beijing 100084, China; (Z.L.); (L.X.)
| | - Helen Gurgel
- Department of Geography, University of Brasilia (UnB), Brasilia CEP 70910-900, Brazil;
- International Joint Laboratory Sentinela, FIOCRUZ, UnB, IRD, Rio de Janeiro RJ-21040-900, Brazil;
| | - Nadine Dessay
- International Joint Laboratory Sentinela, FIOCRUZ, UnB, IRD, Rio de Janeiro RJ-21040-900, Brazil;
- IRD, UM, UR, UG, UA, UMR ESPACE-DEV, 34090 Montpellier, France
| | - Luojia Hu
- Qian Xuesen Laboratory of Space Technology, China Academy of Space Technology, Beijing 100094, China;
| | - Lei Xu
- Ministry of Education Key Laboratory for Earth System Modeling, Department of Earth System, Science, Tsinghua University, Beijing 100084, China; (Z.L.); (L.X.)
| | - Peng Gong
- Ministry of Education Key Laboratory for Earth System Modeling, Department of Earth System, Science, Tsinghua University, Beijing 100084, China; (Z.L.); (L.X.)
- Center for Healthy Cities, Institute for China Sustainable Urbanization, Tsinghua University, Beijing 100084, China
| |
Collapse
|
12
|
Krystosik A, Njoroge G, Odhiambo L, Forsyth JE, Mutuku F, LaBeaud AD. Solid Wastes Provide Breeding Sites, Burrows, and Food for Biological Disease Vectors, and Urban Zoonotic Reservoirs: A Call to Action for Solutions-Based Research. Front Public Health 2020; 7:405. [PMID: 32010659 PMCID: PMC6979070 DOI: 10.3389/fpubh.2019.00405] [Citation(s) in RCA: 61] [Impact Index Per Article: 15.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2019] [Accepted: 12/19/2019] [Indexed: 12/22/2022] Open
Abstract
Background: Infectious disease epidemiology and planetary health literature often cite solid waste and plastic pollution as risk factors for vector-borne diseases and urban zoonoses; however, no rigorous reviews of the risks to human health have been published since 1994. This paper aims to identify research gaps and outline potential solutions to interrupt the vicious cycle of solid wastes; disease vectors and reservoirs; infection and disease; and poverty. Methods: We searched peer-reviewed publications from PubMed, Google Scholar, and Stanford Searchworks, and references from relevant articles using the search terms (“disease” OR “epidemiology”) AND (“plastic pollution,” “garbage,” and “trash,” “rubbish,” “refuse,” OR “solid waste”). Abstracts and reports from meetings were included only when they related directly to previously published work. Only articles published in English, Spanish, or Portuguese through 2018 were included, with a focus on post-1994, after the last comprehensive review was published. Cancer, diabetes, and food chain-specific articles were outside the scope and excluded. After completing the literature review, we further limited the literature to “urban zoonotic and biological vector-borne diseases” or to “zoonotic and biological vector-borne diseases of the urban environment.” Results: Urban biological vector-borne diseases, especially Aedes-borne diseases, are associated with solid waste accumulation but vector preferences vary over season and region. Urban zoonosis, especially rodent and canine disease reservoirs, are associated with solid waste in urban settings, especially when garbage accumulates over time, creating burrowing sites and food for reservoirs. Although evidence suggests the link between plastic pollution/solid waste and human disease, measurements are not standardized, confounders are not rigorously controlled, and the quality of evidence varies. Here we propose a framework for solutions-based research in three areas: innovation, education, and policy. Conclusions: Disease epidemics are increasing in scope and scale with urban populations growing, climate change providing newly suitable vector climates, and immunologically naïve populations becoming newly exposed. Sustainable solid waste management is crucial to prevention, specifically in urban environments that favor urban vectors such as Aedes species. We propose that next steps should include more robust epidemiological measurements and propose a framework for solutions-based research.
Collapse
Affiliation(s)
- Amy Krystosik
- Division of Infectious Disease, Department of Pediatrics, School of Medicine, Stanford University, Stanford, CA, United States
| | - Gathenji Njoroge
- School of Public Health, University of California, Berkeley, Berkeley, CA, United States
| | - Lorriane Odhiambo
- College of Public Health, Kent State University, Kent, OH, United States
| | - Jenna E Forsyth
- School of Earth Sciences, Stanford University, Stanford, CA, United States
| | - Francis Mutuku
- Environment and Health Sciences Department, Technical University of Mombasa, Mombasa, Kenya
| | - A Desiree LaBeaud
- Division of Infectious Disease, Department of Pediatrics, School of Medicine, Stanford University, Stanford, CA, United States
| |
Collapse
|
13
|
Laneri K, Cabella B, Prado PI, Mendes Coutinho R, Kraenkel RA. Climate drivers of malaria at its southern fringe in the Americas. PLoS One 2019; 14:e0219249. [PMID: 31291316 PMCID: PMC6619762 DOI: 10.1371/journal.pone.0219249] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2018] [Accepted: 06/19/2019] [Indexed: 01/01/2023] Open
Abstract
In this work we analyze potential environmental drivers of malaria cases in Northwestern Argentina. We inspect causal links between malaria and climatic variables by means of the convergent cross mapping technique, which provides a causality criterion from the theory of dynamic systems. Analysis is based on 12 years of weekly malaria P. vivax cases in Tartagal, Salta, Argentina-at the southern fringe of malaria incidence in the Americas-together with humidity and temperature time-series spanning the same period. Our results show that there are causal links between malaria cases and both maximum temperature, with a delay of five weeks, and minimum temperature, with delays of zero and twenty two weeks. Humidity is also a driver of malaria cases, with thirteen weeks delay between cause and effect. Furthermore we also determined the sign and strength of the effects. Temperature has always a positive non-linear effect on cases, with maximum temperature effects more pronounced above 25°C and minimum above 17°C, while effects of humidity are more intricate: maximum humidity above 85% has a negative effect, whereas minimum humidity has a positive effect on cases. These results might be signaling processes operating at short (below 5 weeks) and long (over 12 weeks) time delays, corresponding to effects related to parasite cycle and mosquito population dynamics respectively. The non-linearities found for the strength of the effect of temperature on malaria cases make warmer areas more prone to higher increases in the disease incidence. Moreover, our results indicate that an increase of extreme weather events could enhance the risks of malaria spreading and re-emergence beyond the current distribution. Both situations, warmer climate and increase of extreme events, will be remarkably increased by the end of the century in this hot spot of climate change.
Collapse
Affiliation(s)
- Karina Laneri
- Grupo de Física Estadística e Interdisciplinaria, CONICET, Centro Atómico Bariloche, Bariloche, Río Negro, Argentina
- * E-mail:
| | - Brenno Cabella
- Instituto de Física Teórica, Universidade Estadual Paulista - UNESP, São Paulo, SP, Brazil
| | - Paulo Inácio Prado
- LAGE do Departamento de Ecologia, Instituto de Biociências da Universidade de São Paulo, São Paulo, SP, Brazil
| | - Renato Mendes Coutinho
- Centro de Matemática, Computação e Cognição (CMCC), Universidade Federal do ABC, Santo André, SP, Brazil
| | - Roberto André Kraenkel
- Instituto de Física Teórica, Universidade Estadual Paulista - UNESP, São Paulo, SP, Brazil
| |
Collapse
|
14
|
Haddawy P, Wettayakorn P, Nonthaleerak B, Su Yin M, Wiratsudakul A, Schöning J, Laosiritaworn Y, Balla K, Euaungkanakul S, Quengdaeng P, Choknitipakin K, Traivijitkhun S, Erawan B, Kraisang T. Large scale detailed mapping of dengue vector breeding sites using street view images. PLoS Negl Trop Dis 2019; 13:e0007555. [PMID: 31356617 PMCID: PMC6687207 DOI: 10.1371/journal.pntd.0007555] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/07/2019] [Revised: 08/08/2019] [Accepted: 06/17/2019] [Indexed: 01/21/2023] Open
Abstract
Targeted environmental and ecosystem management remain crucial in control of dengue. However, providing detailed environmental information on a large scale to effectively target dengue control efforts remains a challenge. An important piece of such information is the extent of the presence of potential dengue vector breeding sites, which consist primarily of open containers such as ceramic jars, buckets, old tires, and flowerpots. In this paper we present the design and implementation of a pipeline to detect outdoor open containers which constitute potential dengue vector breeding sites from geotagged images and to create highly detailed container density maps at unprecedented scale. We implement the approach using Google Street View images which have the advantage of broad coverage and of often being two to three years old which allows correlation analyses of container counts against historical data from manual surveys. Containers comprising eight of the most common breeding sites are detected in the images using convolutional neural network transfer learning. Over a test set of images the object recognition algorithm has an accuracy of 0.91 in terms of F-score. Container density counts are generated and displayed on a decision support dashboard. Analyses of the approach are carried out over three provinces in Thailand. The container counts obtained agree well with container counts from available manual surveys. Multi-variate linear regression relating densities of the eight container types to larval survey data shows good prediction of larval index values with an R-squared of 0.674. To delineate conditions under which the container density counts are indicative of larval counts, a number of factors affecting correlation with larval survey data are analyzed. We conclude that creation of container density maps from geotagged images is a promising approach to providing detailed risk maps at large scale.
Collapse
Affiliation(s)
- Peter Haddawy
- Faculty of ICT, Mahidol University, Salaya, Thailand
- Bremen Spatial Cognition Center, University of Bremen, Bremen, Germany
| | | | | | - Myat Su Yin
- Faculty of ICT, Mahidol University, Salaya, Thailand
| | | | | | | | - Klestia Balla
- Computer Science Department, School of Science and Technology, University of Camerino, Camerino, Italy
| | | | | | | | | | | | | |
Collapse
|
15
|
Scavuzzo JM, Trucco F, Espinosa M, Tauro CB, Abril M, Scavuzzo CM, Frery AC. Modeling Dengue vector population using remotely sensed data and machine learning. Acta Trop 2018; 185:167-175. [PMID: 29777650 DOI: 10.1016/j.actatropica.2018.05.003] [Citation(s) in RCA: 38] [Impact Index Per Article: 6.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2017] [Revised: 05/03/2018] [Accepted: 05/03/2018] [Indexed: 11/30/2022]
Abstract
Mosquitoes are vectors of many human diseases. In particular, Aedes ægypti (Linnaeus) is the main vector for Chikungunya, Dengue, and Zika viruses in Latin America and it represents a global threat. Public health policies that aim at combating this vector require dependable and timely information, which is usually expensive to obtain with field campaigns. For this reason, several efforts have been done to use remote sensing due to its reduced cost. The present work includes the temporal modeling of the oviposition activity (measured weekly on 50 ovitraps in a north Argentinean city) of Aedes ægypti (Linnaeus), based on time series of data extracted from operational earth observation satellite images. We use are NDVI, NDWI, LST night, LST day and TRMM-GPM rain from 2012 to 2016 as predictive variables. In contrast to previous works which use linear models, we employ Machine Learning techniques using completely accessible open source toolkits. These models have the advantages of being non-parametric and capable of describing nonlinear relationships between variables. Specifically, in addition to two linear approaches, we assess a support vector machine, an artificial neural networks, a K-nearest neighbors and a decision tree regressor. Considerations are made on parameter tuning and the validation and training approach. The results are compared to linear models used in previous works with similar data sets for generating temporal predictive models. These new tools perform better than linear approaches, in particular nearest neighbor regression (KNNR) performs the best. These results provide better alternatives to be implemented operatively on the Argentine geospatial risk system that is running since 2012.
Collapse
Affiliation(s)
- Juan M Scavuzzo
- Facultad de Maremática, Atronomía, Física y Computación, Universidad Nacional de Córdoba, Argentina
| | - Francisco Trucco
- Facultad de Maremática, Atronomía, Física y Computación, Universidad Nacional de Córdoba, Argentina
| | | | - Carolina B Tauro
- Instituto de Altos Estudios Espaciales Mario Gulich, Universidad Nacional de Córdoba-Comisión Nacional de Actividades Espaciales, Argentina
| | | | - Carlos M Scavuzzo
- Instituto de Altos Estudios Espaciales Mario Gulich, Universidad Nacional de Córdoba-Comisión Nacional de Actividades Espaciales, Argentina.
| | | |
Collapse
|
16
|
Dietrich D, Dekova R, Davy S, Fahrni G, Geissbühler A. Applications of Space Technologies to Global Health: Scoping Review. J Med Internet Res 2018; 20:e230. [PMID: 29950289 PMCID: PMC6041558 DOI: 10.2196/jmir.9458] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/20/2017] [Revised: 03/21/2018] [Accepted: 04/22/2018] [Indexed: 12/27/2022] Open
Abstract
Background Space technology has an impact on many domains of activity on earth, including in the field of global health. With the recent adoption of the United Nations’ Sustainable Development Goals that highlight the need for strengthening partnerships in different domains, it is useful to better characterize the relationship between space technology and global health. Objective The aim of this study was to identify the applications of space technologies to global health, the key stakeholders in the field, as well as gaps and challenges. Methods We used a scoping review methodology, including a literature review and the involvement of stakeholders, via a brief self-administered, open-response questionnaire. A distinct search on several search engines was conducted for each of the four key technological domains that were previously identified by the UN Office for Outer Space Affairs’ Expert Group on Space and Global Health (Domain A: remote sensing; Domain B: global navigation satellite systems; Domain C: satellite communication; and Domain D: human space flight). Themes in which space technologies are of benefit to global health were extracted. Key stakeholders, as well as gaps, challenges, and perspectives were identified. Results A total of 222 sources were included for Domain A, 82 sources for Domain B, 144 sources for Domain C, and 31 sources for Domain D. A total of 3 questionnaires out of 16 sent were answered. Global navigation satellite systems and geographic information systems are used for the study and forecasting of communicable and noncommunicable diseases; satellite communication and global navigation satellite systems for disaster response; satellite communication for telemedicine and tele-education; and global navigation satellite systems for autonomy improvement, access to health care, as well as for safe and efficient transportation. Various health research and technologies developed for inhabited space flights have been adapted for terrestrial use. Conclusions Although numerous examples of space technology applications to global health exist, improved awareness, training, and collaboration of the research community is needed.
Collapse
Affiliation(s)
- Damien Dietrich
- Hopitaux Universitaires de Genève, eHealth and Telemedicine Division, Geneva, Switzerland
| | - Ralitza Dekova
- Hopitaux Universitaires de Genève, eHealth and Telemedicine Division, Geneva, Switzerland
| | - Stephan Davy
- Hopitaux Universitaires de Genève, eHealth and Telemedicine Division, Geneva, Switzerland
| | - Guillaume Fahrni
- Hopitaux Universitaires de Genève, eHealth and Telemedicine Division, Geneva, Switzerland
| | - Antoine Geissbühler
- Hopitaux Universitaires de Genève, eHealth and Telemedicine Division, Geneva, Switzerland
| |
Collapse
|
17
|
Kesetyaningsih TW, Andarini S, Sudarto, Pramoedyo H. DETERMINATION OF ENVIRONMENTAL FACTORS AFFECTING DENGUE INCIDENCE IN SLEMAN DISTRICT, YOGYAKARTA, INDONESIA. Afr J Infect Dis 2018; 12:13-25. [PMID: 29619427 PMCID: PMC5876768 DOI: 10.2101/ajid.12v1s.3] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/16/2017] [Revised: 09/17/2017] [Accepted: 09/21/2017] [Indexed: 11/14/2022] Open
Abstract
Background: Dengue is a disease related to the environment that spreads rapidly. Prevention movement is considered ineffective; therefore, a more efficient early warning system is required. It is required strongly correlated variables to as predictor in early warning system. This study aims to identify the environmental conditions associated with dengue. Materials and methods: This ecological study was conducted on five sub-districts selected based on the trend of the incidence. Data land cover and elevation obtained using GIS. Climate data were obtained from Meteorology and Climatology and Geophysics Agency of Yogyakarta. Results: There were 1.150 dengue cases from 2008-2013 obtained from District Health Office. The spatial pattern is clustered in all sub-districts (Z-score < -2.58). There is a positive correlation between land cover and dengue (p 0.000; r 0.284) and a negative correlation between elevation areas and dengue (p 0.000; r - 0.127). Multiple Regression Test shows the effect of humidity (p 0.000) and rainfall (p 0.002) with a contribution of 13.5% - 27.4% (r2 0.135 – 0.274), while temperature has no effect in all sub-districts (p > 0.05). There is no effect of climate parameters in sporadic dengue areas (p > 0.05). Conclusion: It is concluded that dengue in Sleman is clustered and associated with the environment parameter, even though it does not have close correlation. High elevated and small building area is consistent with the lower dengue cases. Humidity and rainfall affect dengue, but temperature does not affect dengue.
Collapse
Affiliation(s)
- Tri Wulandari Kesetyaningsih
- Department of Parasitology, Faculty of Medicine and Health Science, Universitas Muhammadiyah Yogyakarta, Indonesia.,Doctoral Program of Environmental Science, Brawijaya University, Malang, Indonesia
| | - Sri Andarini
- Department of Public Health, Faculty of Medicine, Brawijaya University, Malang, Indonesia
| | - Sudarto
- Department of Soil Science, Faculty of Agriculture Brawijaya University, Malang, Indonesia
| | - Henny Pramoedyo
- Department of Statistics, Faculty of Mathematics and Natural Science, Brawijaya University, Malang, Indonesia
| |
Collapse
|
18
|
Spatial and Temporal Characteristics of 2014 Dengue Outbreak in Guangdong, China. Sci Rep 2018; 8:2344. [PMID: 29402909 PMCID: PMC5799376 DOI: 10.1038/s41598-018-19168-6] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/23/2017] [Accepted: 12/22/2017] [Indexed: 11/23/2022] Open
Abstract
The record-breaking number of dengue cases reported in Guangdong, China in 2014 has been topic for many studies. However, the spatial and temporal characteristics of this unexpectedly explosive outbreak are still poorly understood. We adopt an integrated approach to ascertain the spatial-temporal progression of the outbreak in each city in Guangdong as well as in each district in Guangzhou, where the majority of cases occurred. We utilize the Richards model, which determines the waves of reported cases at each location and identifies the turning point for each wave, in combination with a spatial association analysis conducted by computing the standardized G* statistic that measures the degree of spatial autocorrelation of a set of geo-referenced data from a local perspective. We found that Yuexiu district in Guangzhou was the initial hot spot for the outbreak, subsequently spreading to its neighboring districts in Guangzhou and other cities in Guangdong province. Hospital isolation of cases during early stage of outbreak in neighboring Zhongshan (in effort to prevent disease transmission to the vectors) might have played an important role in the timely mitigation of the disease. Integration of modeling approach and spatial association analysis allows us to pinpoint waves that spread the disease to communities beyond the borders of the initially affected regions.
Collapse
|
19
|
Kenneson A, Beltrán-Ayala E, Borbor-Cordova MJ, Polhemus ME, Ryan SJ, Endy TP, Stewart-Ibarra AM. Social-ecological factors and preventive actions decrease the risk of dengue infection at the household-level: Results from a prospective dengue surveillance study in Machala, Ecuador. PLoS Negl Trop Dis 2017; 11:e0006150. [PMID: 29253873 PMCID: PMC5771672 DOI: 10.1371/journal.pntd.0006150] [Citation(s) in RCA: 35] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/11/2017] [Revised: 01/17/2018] [Accepted: 12/03/2017] [Indexed: 11/30/2022] Open
Abstract
BACKGROUND In Ecuador, dengue virus (DENV) infections transmitted by the Aedes aegypti mosquito are among the greatest public health concerns in urban coastal communities. Community- and household-level vector control is the principal means of controlling disease outbreaks. This study aimed to assess the impact of knowledge, attitudes, and practices (KAPs) and social-ecological factors on the presence or absence of DENV infections in the household. METHODS In 2014 and 2015, individuals with DENV infections from sentinel clinics in Machala, Ecuador, were invited to participate in the study, as well as members of their household and members of four neighboring households located within 200 meters. We conducted diagnostic testing for DENV on all study participants; we surveyed heads of households (HOHs) regarding demographics, housing conditions and KAPs. We compared KAPs and social-ecological factors between households with (n = 139) versus without (n = 80) DENV infections, using bivariate analyses and multivariate logistic regression models with and without interactions. RESULTS Significant risk factors in multivariate models included proximity to abandoned properties, interruptions in piped water, and shaded patios (p<0.05). Significant protective factors included the use of mosquito bed nets, fumigation inside the home, and piped water inside the home (p<0.05). In bivariate analyses (but not multivariate modeling), DENV infections were positively associated with HOHs who were male, employed, and of younger age than households without infections (p<0.05). DENV infections were not associated with knowledge, attitude, or reported barriers to prevention activities. DISCUSSION Specific actions that can be considered to decrease the risk of DENV infections in the household include targeting vector control in highly shaded properties, fumigating inside the home, and use of mosquito bed nets. Community-level interventions include cleanup of abandoned properties, daily garbage collection, and reliable piped water inside houses. These findings can inform interventions to reduce the risk of other diseases transmitted by the Ae. aegypti mosquito, such as chikungunya and Zika fever.
Collapse
Affiliation(s)
- Aileen Kenneson
- Center for Global Health & Translational Sciences, SUNY Upstate Medical University, Syracuse, NY, United States of America
| | - Efraín Beltrán-Ayala
- Facultad de Medicina, Universidad Técnica de Machala, Machala, El Oro Province, Ecuador
| | - Mercy J. Borbor-Cordova
- Facultad de Ingeniería Marítima, Ciencias Biológicas, Oceánicas y Recursos Naturales, Escuela Superior Politecnica del Litoral (ESPOL), Guayaquil, Ecuador
| | - Mark E. Polhemus
- Center for Global Health & Translational Sciences, SUNY Upstate Medical University, Syracuse, NY, United States of America
- Department of Medicine, SUNY Upstate Medical University, Syracuse, NY, United States of America
| | - Sadie J. Ryan
- Center for Global Health & Translational Sciences, SUNY Upstate Medical University, Syracuse, NY, United States of America
- Department of Geography, University of Florida, Gainesville, FL, United States of America
- Emerging Pathogens Institute, University of Florida, Gainesville, FL, United States of America
- College of Life Sciences, University of Kwazulu-Natal, Durban, South Africa
| | - Timothy P. Endy
- Center for Global Health & Translational Sciences, SUNY Upstate Medical University, Syracuse, NY, United States of America
- Department of Medicine, SUNY Upstate Medical University, Syracuse, NY, United States of America
- Department of Microbiology & Immunology, SUNY Upstate Medical University, Syracuse, NY, United States of America
| | - Anna M. Stewart-Ibarra
- Center for Global Health & Translational Sciences, SUNY Upstate Medical University, Syracuse, NY, United States of America
- Department of Medicine, SUNY Upstate Medical University, Syracuse, NY, United States of America
| |
Collapse
|