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Schmuck B, Greco G, Shilkova O, Rising A. Effects of Mini-Spidroin Repeat Region on the Mechanical Properties of Artificial Spider Silk Fibers. ACS OMEGA 2024; 9:42423-42432. [PMID: 39431068 PMCID: PMC11483375 DOI: 10.1021/acsomega.4c06031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/29/2024] [Revised: 08/19/2024] [Accepted: 09/19/2024] [Indexed: 10/22/2024]
Abstract
Spiders can produce up to seven different types of silk, each with unique mechanical properties that stem from variations in the repetitive regions of spider silk proteins (spidroins). Artificial spider silk can be made from mini-spidroins in an all-aqueous-based spinning process, but the strongest fibers seldom reach more than 25% of the strength of native silk fibers. With the aim to improve the mechanical properties of silk fibers made from mini-spidroins and to understand the relationship between the protein design and the mechanical properties of the fibers, we designed 16 new spidroins, ranging from 31.7 to 59.5 kDa, that feature the globular spidroin N- and C-terminal domains, but harbor different repetitive sequences. We found that more than 50% of these constructs could be spun by extruding them into low-pH aqueous buffer and that the best fibers were produced from proteins whose repeat regions were derived from major ampullate spidroin 4 (MaSp4) and elastin. The mechanical properties differed between fiber types but did not correlate with the expected properties based on the origin of the repeats, suggesting that additional factors beyond protein design impact the properties of the fibers.
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Affiliation(s)
- Benjamin Schmuck
- Department
of Medicine Huddinge, Karolinska Institutet,
Neo, 141 83 Huddinge, Sweden
- Department
of Animal Biosciences, Swedish University
of Agricultural Sciences, 750 07 Uppsala, Sweden
| | - Gabriele Greco
- Department
of Animal Biosciences, Swedish University
of Agricultural Sciences, 750 07 Uppsala, Sweden
| | - Olga Shilkova
- Department
of Medicine Huddinge, Karolinska Institutet,
Neo, 141 83 Huddinge, Sweden
| | - Anna Rising
- Department
of Medicine Huddinge, Karolinska Institutet,
Neo, 141 83 Huddinge, Sweden
- Department
of Animal Biosciences, Swedish University
of Agricultural Sciences, 750 07 Uppsala, Sweden
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2
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Guessous G, Blake L, Bui A, Woo Y, Manzanarez G. Disentangling the Web: An Interdisciplinary Review on the Potential and Feasibility of Spider Silk Bioproduction. ACS Biomater Sci Eng 2024; 10:5412-5438. [PMID: 39136701 PMCID: PMC11388149 DOI: 10.1021/acsbiomaterials.4c00145] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/10/2024]
Abstract
The remarkable material properties of spider silk, such as its high toughness and tensile strength combined with its low density, make it a highly sought-after material with myriad applications. In addition, the biological nature of spider silk makes it a promising, potentially sustainable alternative to many toxic or petrochemical-derived materials. Therefore, interest in the heterologous production of spider silk proteins has greatly increased over the past few decades, making recombinant spider silk an important frontier in biomanufacturing. This has resulted in a diversity of potential host organisms, a large space for sequence design, and a variety of downstream processing techniques and product applications for spider silk production. Here, we highlight advances in each of these technical aspects as well as white spaces therein, still ripe for further investigation and discovery. Additionally, industry landscaping, patent analyses, and interviews with Key Opinion Leaders help define both the research and industry landscapes. In particular, we found that though textiles dominated the early products proposed by companies, the versatile nature of spider silk has opened up possibilities in other industries, such as high-performance materials in automotive applications or biomedical therapies. While continuing enthusiasm has imbued scientists and investors alike, many technical and business considerations still remain unsolved before spider silk can be democratized as a high-performance product. We provide insights and strategies for overcoming these initial hurdles, and we highlight the importance of collaboration between academia, industry, and policy makers. Linking technical considerations to business and market entry strategies highlights the importance of a holistic approach for the effective scale-up and commercial viability of spider silk bioproduction.
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Affiliation(s)
- Ghita Guessous
- Department of Physics, University of California at San Diego, La Jolla, California 92092, United States
- Research Initiative, Nucleate, 88 Gordon Street #401, Brighton, Massachusetts 02135, United States
| | - Lauren Blake
- Research Initiative, Nucleate, 88 Gordon Street #401, Brighton, Massachusetts 02135, United States
- Department of Biomedical Engineering, Tufts University, Medford, Massachusetts 02155, United States
- Tufts University Center for Cellular Agriculture (TUCCA), Tufts University, Medford, Massachusetts 02155, United States
| | - Anthony Bui
- Research Initiative, Nucleate, 88 Gordon Street #401, Brighton, Massachusetts 02135, United States
- Department of Molecular Medicine, Cornell University, Ithaca, New York 14850, United States
| | - Yelim Woo
- Research Initiative, Nucleate, 88 Gordon Street #401, Brighton, Massachusetts 02135, United States
- Questrom School of Business, Boston University, Boston, Massachusetts 02215, United States
| | - Gabriel Manzanarez
- Research Initiative, Nucleate, 88 Gordon Street #401, Brighton, Massachusetts 02135, United States
- Division of Biological Sciences, University of California at San Diego, La Jolla, California 92092, United States
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3
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Yu H, Chen G, Li L, Wei G, Li Y, Xiong S, Qi X. Spider minor ampullate silk protein nanoparticles: an effective protein delivery system capable of enhancing systemic immune responses. MedComm (Beijing) 2024; 5:e573. [PMID: 38882211 PMCID: PMC11179522 DOI: 10.1002/mco2.573] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2023] [Revised: 03/17/2024] [Accepted: 04/05/2024] [Indexed: 06/18/2024] Open
Abstract
Spider silk proteins (spidroins) are particularly attractive due to their excellent biocompatibility. Spider can produce up to seven different types of spidroins, each with unique properties and functions. Spider minor ampullate silk protein (MiSp) might be particularly interesting for biomedical applications, as the constituent silk is mechanically strong and does not super-contract in water, attributed to its amino acid composition. In this study, we evaluate the potential of recombinant nanoparticles derived from Araneus ventricosus MiSp as a protein delivery carrier. The MiSp-based nanoparticles were able to serve as an effective delivery system, achieving nearly 100% efficiency in loading the model protein lysozyme, and displayed a sustained release profile at physiological pH. These nanoparticles could significantly improve the delivery efficacy of the model proteins through different administration routes. Furthermore, nanoparticles loaded with model protein antigen lysozyme after subcutaneous or intramuscular administration could enhance antigen-specific immune responses in mouse models, through a mechanism involving antigen-depot effects at the injection site, long-term antigen persistence, and efficient uptake by dendritic cells as well as internalization by lymph nodes. These findings highlight the transnational potential of MiSp-based nanoparticle system for protein drug and vaccine delivery.
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Affiliation(s)
- Hairui Yu
- The Jiangsu Key Laboratory of Infection and Immunity Institutes of Biology and Medical Sciences Soochow University Suzhou China
| | - Gefei Chen
- Department of Biosciences and Nutrition Karolinska Institutet Huddinge Sweden
| | - Linchao Li
- The Jiangsu Key Laboratory of Infection and Immunity Institutes of Biology and Medical Sciences Soochow University Suzhou China
| | - Guoqiang Wei
- The Jiangsu Key Laboratory of Infection and Immunity Institutes of Biology and Medical Sciences Soochow University Suzhou China
| | - Yanan Li
- Department of Neurosurgery Changhai Hospital Naval Medical University Shanghai China
| | - Sidong Xiong
- The Jiangsu Key Laboratory of Infection and Immunity Institutes of Biology and Medical Sciences Soochow University Suzhou China
| | - Xingmei Qi
- The Jiangsu Key Laboratory of Infection and Immunity Institutes of Biology and Medical Sciences Soochow University Suzhou China
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4
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Yang D, Wang S, Wang K, Zheng S, Zan X, Wen R. Physical Properties of the Second Type of Aciniform Spidroin (AcSp2) from Neoscona theisi Reveal a pH-Dependent Self-Assembly Repetitive Domain. ACS Biomater Sci Eng 2023; 9:6670-6682. [PMID: 38019679 DOI: 10.1021/acsbiomaterials.3c01194] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2023]
Abstract
Orb-weaving spiders can use an array of specialized silks with diverse mechanical properties and functions for daily survival. Of all spider silk types, aciniform silk is the toughest silk fiber that combines high strength and elasticity. Although aciniform spidroins (AcSp) are the main protein in aciniform silks, their complete genes have rarely been characterized until now. Moreover, the structural and physical properties of AcSp variant proteins within the species are also unclear. Here, we present three full-length AcSp genes (named AcSp1A, AcSp1B, and AcSp2) from the orb-weaving spider Neoscona theisi and investigate the structural and mechanical features of these three AcSp repetitive domains. We demonstrate that all three AcSp proteins have mainly α-helical structural features in neutral solution and high thermal stability. Significantly, the AcSp2 repetitive domain shows a pH-dependent structural transition from α to β conformations and can self-assemble into amyloid fibrils under acidic conditions, which is the first reported AcSp repetitive domain with pH-dependent self-assembly capacity. Compared with the other two AcSp spidroins, AcSp2 demonstrated the lowest expression level in the aciniform gland but had the highest strength for its silk fiber. Collectively, our findings provide new insight into the physical properties of each component of aciniform silk and expand the repertoire of known spidroin sequences for the synthesis of artificial silk materials.
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Affiliation(s)
- Dong Yang
- Department of Radiation and Medical Oncology, the Second Affiliated Hospital of Wenzhou Medical University, Wenzhou, Zhejiang Province 325035, China
- School of Ophthalmology and Optometry, Eye Hospital, School of Biomedical Engineering, Wenzhou Medical University, Wenzhou, Zhejiang Province 325035, China
| | - Suyang Wang
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai 201620, China
| | - Kangkang Wang
- Oujiang Laboratory, Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, Zhejiang Province 325000, China
| | - Shengwu Zheng
- Wenzhou Celecare Medical Instruments Co., Ltd., Wenzhou, Zhejiang Province 325000, China
| | - Xingjie Zan
- School of Ophthalmology and Optometry, Eye Hospital, School of Biomedical Engineering, Wenzhou Medical University, Wenzhou, Zhejiang Province 325035, China
- Oujiang Laboratory, Wenzhou Institute, University of Chinese Academy of Sciences, Wenzhou, Zhejiang Province 325000, China
| | - Rui Wen
- Department of Radiation and Medical Oncology, the Second Affiliated Hospital of Wenzhou Medical University, Wenzhou, Zhejiang Province 325035, China
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5
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Qi X, Wang Y, Yu H, Liu R, Leppert A, Zheng Z, Zhong X, Jin Z, Wang H, Li X, Wang X, Landreh M, A Morozova-Roche L, Johansson J, Xiong S, Iashchishyn I, Chen G. Spider Silk Protein Forms Amyloid-Like Nanofibrils through a Non-Nucleation-Dependent Polymerization Mechanism. SMALL (WEINHEIM AN DER BERGSTRASSE, GERMANY) 2023; 19:e2304031. [PMID: 37455347 DOI: 10.1002/smll.202304031] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2023] [Revised: 06/29/2023] [Indexed: 07/18/2023]
Abstract
Amyloid fibrils-nanoscale fibrillar aggregates with high levels of order-are pathogenic in some today incurable human diseases; however, there are also many physiologically functioning amyloids in nature. The process of amyloid formation is typically nucleation-elongation-dependent, as exemplified by the pathogenic amyloid-β peptide (Aβ) that is associated with Alzheimer's disease. Spider silk, one of the toughest biomaterials, shares characteristics with amyloid. In this study, it is shown that forming amyloid-like nanofibrils is an inherent property preserved by various spider silk proteins (spidroins). Both spidroins and Aβ capped by spidroin N- and C-terminal domains, can assemble into macroscopic spider silk-like fibers that consist of straight nanofibrils parallel to the fiber axis as observed in native spider silk. While Aβ forms amyloid nanofibrils through a nucleation-dependent pathway and exhibits strong cytotoxicity and seeding effects, spidroins spontaneously and rapidly form amyloid-like nanofibrils via a non-nucleation-dependent polymerization pathway that involves lateral packing of fibrils. Spidroin nanofibrils share amyloid-like properties but lack strong cytotoxicity and the ability to self-seed or cross-seed human amyloidogenic peptides. These results suggest that spidroins´ unique primary structures have evolved to allow functional properties of amyloid, and at the same time direct their fibrillization pathways to avoid formation of cytotoxic intermediates.
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Affiliation(s)
- Xingmei Qi
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou, 215123, China
| | - Yu Wang
- Department of Biosciences and Nutrition, Karolinska Institutet, Huddinge, 14157, Sweden
- College of Wildlife and Protected Area, Northeast Forestry University, Harbin, 150040, China
| | - Hairui Yu
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou, 215123, China
| | - Ruifang Liu
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou, 215123, China
| | - Axel Leppert
- Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Solna, 17165, Sweden
| | - Zihan Zheng
- Department of Biosciences and Nutrition, Karolinska Institutet, Huddinge, 14157, Sweden
- Department of Pharmacology, Xi'an Jiaotong University, Shaanxi, 710061, China
| | - Xueying Zhong
- School of Engineering Sciences in Chemistry, Biotechnology and Health, Department of Biomedical Engineering and Health Systems, KTH Royal Institute of Technology, Huddinge, 14152, Sweden
| | - Zhen Jin
- Department of Biosciences and Nutrition, Karolinska Institutet, Huddinge, 14157, Sweden
- Department of Pharmacology, Xi'an Jiaotong University, Shaanxi, 710061, China
| | - Han Wang
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou, 215123, China
| | - Xiaoli Li
- Department of Pharmacology, College of Pharmacy, Chongqing Medical University, Chongqing, 400016, China
| | - Xiuzhe Wang
- Department of Neurology, Shanghai Sixth People's Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 200233, China
| | - Michael Landreh
- Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Solna, 17165, Sweden
| | | | - Jan Johansson
- Department of Biosciences and Nutrition, Karolinska Institutet, Huddinge, 14157, Sweden
| | - Sidong Xiong
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou, 215123, China
| | - Igor Iashchishyn
- Department of Medical Biochemistry and Biophysics, Umeå University, Umeå, 90187, Sweden
| | - Gefei Chen
- Department of Biosciences and Nutrition, Karolinska Institutet, Huddinge, 14157, Sweden
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6
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Yang H, Yang J, Wang Z, Zhibin W, Tian J, Chen J, Liu S, Li J, Liang Q, Lan J. Transcriptome Changes Reveal the Toxic Mechanism of Cadmium and Lead Combined Exposure on Silk Production and Web-Weaving Behavior of Spider A. ventricosus. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2023; 57:14917-14928. [PMID: 37751292 DOI: 10.1021/acs.est.3c06838] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 09/27/2023]
Abstract
The combined exposure of multiple metals imposes a substantial burden on the ecophysiological functions in organisms; however, the precise mechanism(s) remains largely unknown. Here, adult female A. ventricosus were exposed to single and combined exposure to cadmium (Cd) and lead (Pb) through the food chain. The aim was to explore the combined toxicity of these metals on silk production and web-weaving behavior at physiological, cellular morphological, and transcriptomic levels. The Cd and Pb combined exposure significantly inhibited the ability of silk production and web-weaving, including reduced silk fiber weight and diameter of single strands, lowered weaving position, induced nocturnal weaving, and increased instances of no-web, and showed a dose-response relationship on the Cd and Pb bioaccumulation. Concurrently, severe oxidative stress and degenerative changes in cells were observed. In addition, the combined pollution of Cd and Pb demonstrated synergistic effects, influenced by variations in concentration, on the enrichment of metals, inhibition of silk weight, oxidative damage, and cellular degeneration. At the transcriptome level, the upregulated ampullate spidroin genes and downregulated amino acid anabolic genes, upregulated Far genes and downregulated cytoskeleton-related TUBA genes, and overexpressed AChE and Glu genes may tend to present promising potential as biomarkers for silk protein synthesis, cellular degeneration, and neurotransmitter induction. This study offers an enormous capability for a comprehensive understanding of the eco-toxicological effects and mechanisms of multiheavy metals pollution.
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Affiliation(s)
- Huilin Yang
- College of Environment & Ecology, Hunan Agricultural University, Changsha, 410128 Hunan, China
- Hunan Provincial Key Laboratory of Rural Ecosystem Health in Dongting Lake Area, Changsha, 410128 Hunan, China
| | - Jing Yang
- College of Environment & Ecology, Hunan Agricultural University, Changsha, 410128 Hunan, China
- Hunan Provincial Key Laboratory of Rural Ecosystem Health in Dongting Lake Area, Changsha, 410128 Hunan, China
| | - Zhi Wang
- College of Life Science, Hunan Normal University, Changsha, 410006 Hunan, China
| | - Wu Zhibin
- College of Environment & Ecology, Hunan Agricultural University, Changsha, 410128 Hunan, China
- Hunan Provincial Key Laboratory of Rural Ecosystem Health in Dongting Lake Area, Changsha, 410128 Hunan, China
| | - Jianxiang Tian
- College of Water Resources & Civil Engineering, Hunan Agricultural University, Changsha, 410128 Hunan, China
| | - Jinkun Chen
- College of Environment & Ecology, Hunan Agricultural University, Changsha, 410128 Hunan, China
- Hunan Provincial Key Laboratory of Rural Ecosystem Health in Dongting Lake Area, Changsha, 410128 Hunan, China
| | - Shize Liu
- College of Environment & Ecology, Hunan Agricultural University, Changsha, 410128 Hunan, China
- Hunan Provincial Key Laboratory of Rural Ecosystem Health in Dongting Lake Area, Changsha, 410128 Hunan, China
| | - Jiajia Li
- College of Environment & Ecology, Hunan Agricultural University, Changsha, 410128 Hunan, China
| | - Qi Liang
- College of Environment & Ecology, Hunan Agricultural University, Changsha, 410128 Hunan, China
| | - Jiao Lan
- College of Environment & Ecology, Hunan Agricultural University, Changsha, 410128 Hunan, China
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7
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Leppert A, Chen G, Lama D, Sahin C, Railaite V, Shilkova O, Arndt T, Marklund EG, Lane DP, Rising A, Landreh M. Liquid-Liquid Phase Separation Primes Spider Silk Proteins for Fiber Formation via a Conditional Sticker Domain. NANO LETTERS 2023. [PMID: 37084706 DOI: 10.1021/acs.nanolett.3c00773] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/03/2023]
Abstract
Many protein condensates can convert to fibrillar aggregates, but the underlying mechanisms are unclear. Liquid-liquid phase separation (LLPS) of spider silk proteins, spidroins, suggests a regulatory switch between both states. Here, we combine microscopy and native mass spectrometry to investigate the influence of protein sequence, ions, and regulatory domains on spidroin LLPS. We find that salting out-effects drive LLPS via low-affinity stickers in the repeat domains. Interestingly, conditions that enable LLPS simultaneously cause dissociation of the dimeric C-terminal domain (CTD), priming it for aggregation. Since the CTD enhances LLPS of spidroins but is also required for their conversion into amyloid-like fibers, we expand the stickers and spacers-model of phase separation with the concept of folded domains as conditional stickers that represent regulatory units.
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Affiliation(s)
- Axel Leppert
- Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, S-17165 Solna, Sweden
| | - Gefei Chen
- Department of Biosciences and Nutrition, Karolinska Institutet, S-14157 Huddinge, Sweden
| | - Dilraj Lama
- Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, S-17165 Solna, Sweden
| | - Cagla Sahin
- Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, S-17165 Solna, Sweden
- Linderstro̷m-Lang Centre for Protein Science, Department of Biology, University of Copenhagen, 2200 Copenhagen, Denmark
| | - Vaida Railaite
- Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, S-17165 Solna, Sweden
| | - Olga Shilkova
- Department of Biosciences and Nutrition, Karolinska Institutet, S-14157 Huddinge, Sweden
| | - Tina Arndt
- Department of Biosciences and Nutrition, Karolinska Institutet, S-14157 Huddinge, Sweden
| | - Erik G Marklund
- Department of Chemistry - BMC, Uppsala University, S-75123 Uppsala, Sweden
| | - David P Lane
- Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, S-17165 Solna, Sweden
| | - Anna Rising
- Department of Biosciences and Nutrition, Karolinska Institutet, S-14157 Huddinge, Sweden
- Department of Anatomy Physiology and Biochemistry, Swedish University of Agricultural Sciences, 750 07 Uppsala, Sweden
| | - Michael Landreh
- Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, S-17165 Solna, Sweden
- Department of Cell and Molecular Biology, Uppsala University, S-75124 Uppsala, Sweden
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8
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Characteristic Evaluation of Recombinant MiSp/Poly(lactic- co-glycolic) Acid (PLGA) Nanofiber Scaffolds as Potential Scaffolds for Bone Tissue Engineering. Int J Mol Sci 2023; 24:ijms24021219. [PMID: 36674734 PMCID: PMC9861889 DOI: 10.3390/ijms24021219] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2022] [Revised: 12/31/2022] [Accepted: 01/05/2023] [Indexed: 01/11/2023] Open
Abstract
Biomaterial-based nanofibrous scaffolds are the most effective alternative to bone transplantation therapy. Here, two recombinant minor ampullate spidroins (spider silk proteins), R1SR2 and NR1SR2C, were blended with Poly(lactic-co-glycolic) Acid (PLGA), respectively, to generate nanofiber scaffolds by electrospinning. The N-terminal (N), C-terminal (C), repeating (R1 and R2) and spacer (S) modules were all derived from the minor ampullate spidroins (MiSp). The physical properties and structures of the blended scaffolds were measured by scanning electron microscopy (SEM), water contact angle measurement, Fourier transform infrared spectroscopy (FTIR), Differential scanning calorimetry (DSC), and Tensile mechanical testing. The results showed that blending of MiSp (R1SR2 and NR1SR2C) reduced the diameter of nanofibers, increased the porosity and glass transition temperatures of nanofibrous scaffolds, and effectively improved the hydrophilicity and ultimate strain of scaffolds. It is worth noting that the above changes were more significant in the presence of the N- and C-termini of MiSp. In cell culture assays, human bone mesenchymal stem cells (HBMSCs) grown on NR1SR2C/PLGA (20/80) scaffolds displayed markedly enhanced proliferative and adhesive abilities compared with counterparts grown on pure PLGA scaffolds. Jointly, these findings indicated recombinant MiSp/PLGA, particularly NR1SR2C/PLGA (20/80) blend nanofibrous scaffolds, is promising for bone tissue engineering.
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9
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Miller J, Zimin AV, Gordus A. Chromosome-level genome and the identification of sex chromosomes in Uloborus diversus. Gigascience 2022; 12:giad002. [PMID: 36762707 PMCID: PMC9912274 DOI: 10.1093/gigascience/giad002] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2022] [Revised: 11/18/2022] [Accepted: 01/03/2023] [Indexed: 02/11/2023] Open
Abstract
The orb web is a remarkable example of animal architecture that is observed in families of spiders that diverged over 200 million years ago. While several genomes exist for araneid orb-weavers, none exist for other orb-weaving families, hampering efforts to investigate the genetic basis of this complex behavior. Here we present a chromosome-level genome assembly for the cribellate orb-weaving spider Uloborus diversus. The assembly reinforces evidence of an ancient arachnid genome duplication and identifies complete open reading frames for every class of spidroin gene, which encode the proteins that are the key structural components of spider silks. We identified the 2 X chromosomes for U. diversus and identify candidate sex-determining loci. This chromosome-level assembly will be a valuable resource for evolutionary research into the origins of orb-weaving, spidroin evolution, chromosomal rearrangement, and chromosomal sex determination in spiders.
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Affiliation(s)
- Jeremiah Miller
- Department of Biology, Johns Hopkins University, Baltimore, MD 21218, USA
| | - Aleksey V Zimin
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, MD 21218, USA
- Center for Computational Biology, Johns Hopkins University, Baltimore, MD 21218, USA
| | - Andrew Gordus
- Department of Biology, Johns Hopkins University, Baltimore, MD 21218, USA
- Solomon H. Snyder Department of Neuroscience, Johns Hopkins University, Baltimore, MD 21218, USA
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10
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Arndt T, Jaudzems K, Shilkova O, Francis J, Johansson M, Laity PR, Sahin C, Chatterjee U, Kronqvist N, Barajas-Ledesma E, Kumar R, Chen G, Strömberg R, Abelein A, Langton M, Landreh M, Barth A, Holland C, Johansson J, Rising A. Spidroin N-terminal domain forms amyloid-like fibril based hydrogels and provides a protein immobilization platform. Nat Commun 2022; 13:4695. [PMID: 35970823 PMCID: PMC9378615 DOI: 10.1038/s41467-022-32093-7] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/08/2021] [Accepted: 07/15/2022] [Indexed: 11/24/2022] Open
Abstract
Recombinant spider silk proteins (spidroins) have multiple potential applications in development of novel biomaterials, but their multimodal and aggregation-prone nature have complicated production and straightforward applications. Here, we report that recombinant miniature spidroins, and importantly also the N-terminal domain (NT) on its own, rapidly form self-supporting and transparent hydrogels at 37 °C. The gelation is caused by NT α-helix to β-sheet conversion and formation of amyloid-like fibrils, and fusion proteins composed of NT and green fluorescent protein or purine nucleoside phosphorylase form hydrogels with intact functions of the fusion moieties. Our findings demonstrate that recombinant NT and fusion proteins give high expression yields and bestow attractive properties to hydrogels, e.g., transparency, cross-linker free gelation and straightforward immobilization of active proteins at high density. Recombinant spider silks are of interest but the multimodal and aggregation-prone nature of them is a limitation. Here, the authors report on a miniature spidroin based on the N-terminal domain which forms a hydrogel at 37 °C which allows for ease of production and fusion protein modification to generate functional biomaterials.
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Affiliation(s)
- Tina Arndt
- Department of Biosciences and Nutrition, Karolinska Institutet, Neo, Blickagången 16, Huddinge, 141 52, Sweden
| | - Kristaps Jaudzems
- Department of Physical Organic Chemistry, Latvian Institute of Organic Synthesis, Riga, LV-1006, Latvia
| | - Olga Shilkova
- Department of Biosciences and Nutrition, Karolinska Institutet, Neo, Blickagången 16, Huddinge, 141 52, Sweden
| | - Juanita Francis
- Department of Biosciences and Nutrition, Karolinska Institutet, Neo, Blickagången 16, Huddinge, 141 52, Sweden
| | - Mathias Johansson
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, Uppsala, 750 07, Sweden, Box 7015
| | - Peter R Laity
- Department of Materials Science and Engineering, The University of Sheffield, Sir Robert Hadfield Building, Mappin Street, Sheffield, S1 3JD, UK
| | - Cagla Sahin
- Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Solnavägen 9, 171 65, Solna, Sweden
| | - Urmimala Chatterjee
- Department of Biosciences and Nutrition, Karolinska Institutet, Neo, Blickagången 16, Huddinge, 141 52, Sweden
| | - Nina Kronqvist
- Department of Biosciences and Nutrition, Karolinska Institutet, Neo, Blickagången 16, Huddinge, 141 52, Sweden
| | - Edgar Barajas-Ledesma
- Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Solnavägen 9, 171 65, Solna, Sweden
| | - Rakesh Kumar
- Department of Biosciences and Nutrition, Karolinska Institutet, Neo, Blickagången 16, Huddinge, 141 52, Sweden
| | - Gefei Chen
- Department of Biosciences and Nutrition, Karolinska Institutet, Neo, Blickagången 16, Huddinge, 141 52, Sweden
| | - Roger Strömberg
- Department of Biosciences and Nutrition, Karolinska Institutet, Neo, Blickagången 16, Huddinge, 141 52, Sweden
| | - Axel Abelein
- Department of Biosciences and Nutrition, Karolinska Institutet, Neo, Blickagången 16, Huddinge, 141 52, Sweden
| | - Maud Langton
- Department of Molecular Sciences, Swedish University of Agricultural Sciences, Uppsala, 750 07, Sweden, Box 7015
| | - Michael Landreh
- Department of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Solnavägen 9, 171 65, Solna, Sweden
| | - Andreas Barth
- Department of Biochemistry and Biophysics, The Arrhenius Laboratories for Natural Sciences, Stockholm University, 10691, Stockholm, Sweden
| | - Chris Holland
- Department of Materials Science and Engineering, The University of Sheffield, Sir Robert Hadfield Building, Mappin Street, Sheffield, S1 3JD, UK
| | - Jan Johansson
- Department of Biosciences and Nutrition, Karolinska Institutet, Neo, Blickagången 16, Huddinge, 141 52, Sweden
| | - Anna Rising
- Department of Biosciences and Nutrition, Karolinska Institutet, Neo, Blickagången 16, Huddinge, 141 52, Sweden. .,Department of Anatomy, Physiology and Biochemistry, Swedish University of Agricultural Sciences, Uppsala, 750 07, Sweden.
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11
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Bittencourt DMDC, Oliveira P, Michalczechen-Lacerda VA, Rosinha GMS, Jones JA, Rech EL. Bioengineering of spider silks for the production of biomedical materials. Front Bioeng Biotechnol 2022; 10:958486. [PMID: 36017345 PMCID: PMC9397580 DOI: 10.3389/fbioe.2022.958486] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2022] [Accepted: 07/14/2022] [Indexed: 11/13/2022] Open
Abstract
Spider silks are well known for their extraordinary mechanical properties. This characteristic is a result of the interplay of composition, structure and self-assembly of spider silk proteins (spidroins). Advances in synthetic biology have enabled the design and production of spidroins with the aim of biomimicking the structure-property-function relationships of spider silks. Although in nature only fibers are formed from spidroins, in vitro, scientists can explore non-natural morphologies including nanofibrils, particles, capsules, hydrogels, films or foams. The versatility of spidroins, along with their biocompatible and biodegradable nature, also placed them as leading-edge biological macromolecules for improved drug delivery and various biomedical applications. Accordingly, in this review, we highlight the relationship between the molecular structure of spider silk and its mechanical properties and aims to provide a critical summary of recent progress in research employing recombinantly produced bioengineered spidroins for the production of innovative bio-derived structural materials.
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Affiliation(s)
- Daniela Matias de C. Bittencourt
- Embrapa Genetic Resources and Biotechnology, National Institute of Science and Technology—Synthetic Biology, Brasília, DF, Brazil
| | - Paula Oliveira
- Department of Biology, Utah State University, Logan, UT, United States
| | | | - Grácia Maria Soares Rosinha
- Embrapa Genetic Resources and Biotechnology, National Institute of Science and Technology—Synthetic Biology, Brasília, DF, Brazil
| | - Justin A. Jones
- Department of Biology, Utah State University, Logan, UT, United States
| | - Elibio L. Rech
- Embrapa Genetic Resources and Biotechnology, National Institute of Science and Technology—Synthetic Biology, Brasília, DF, Brazil
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12
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Ramezaniaghdam M, Nahdi ND, Reski R. Recombinant Spider Silk: Promises and Bottlenecks. Front Bioeng Biotechnol 2022; 10:835637. [PMID: 35350182 PMCID: PMC8957953 DOI: 10.3389/fbioe.2022.835637] [Citation(s) in RCA: 32] [Impact Index Per Article: 10.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2021] [Accepted: 02/01/2022] [Indexed: 02/02/2023] Open
Abstract
Spider silk threads have exceptional mechanical properties such as toughness, elasticity and low density, which reach maximum values compared to other fibre materials. They are superior even compared to Kevlar and steel. These extraordinary properties stem from long length and specific protein structures. Spider silk proteins can consist of more than 20,000 amino acids. Polypeptide stretches account for more than 90% of the whole protein, and these domains can be repeated more than a hundred times. Each repeat unit has a specific function resulting in the final properties of the silk. These properties make them attractive for innovative material development for medical or technical products as well as cosmetics. However, with livestock breeding of spiders it is not possible to reach high volumes of silk due to the cannibalistic behaviour of these animals. In order to obtain spider silk proteins (spidroins) on a large scale, recombinant production is attempted in various expression systems such as plants, bacteria, yeasts, insects, silkworms, mammalian cells and animals. For viable large-scale production, cost-effective and efficient production systems are needed. This review describes the different types of spider silk, their proteins and structures and discusses the production of these difficult-to-express proteins in different host organisms with an emphasis on plant systems.
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Affiliation(s)
- Maryam Ramezaniaghdam
- Plant Biotechnology, Faculty of Biology, University of Freiburg, Freiburg, Germany
- Cluster of Excellence livMatS at FIT – Freiburg Center for Interactive Materials and Bioinspired Technologies, University of Freiburg, Freiburg, Germany
| | - Nadia D. Nahdi
- Plant Biotechnology, Faculty of Biology, University of Freiburg, Freiburg, Germany
| | - Ralf Reski
- Plant Biotechnology, Faculty of Biology, University of Freiburg, Freiburg, Germany
- Cluster of Excellence livMatS at FIT – Freiburg Center for Interactive Materials and Bioinspired Technologies, University of Freiburg, Freiburg, Germany
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13
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Li J, Li S, Huang J, Khan AQ, An B, Zhou X, Liu Z, Zhu M. Spider Silk-Inspired Artificial Fibers. ADVANCED SCIENCE (WEINHEIM, BADEN-WURTTEMBERG, GERMANY) 2022; 9:e2103965. [PMID: 34927397 PMCID: PMC8844500 DOI: 10.1002/advs.202103965] [Citation(s) in RCA: 43] [Impact Index Per Article: 14.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/08/2021] [Revised: 11/19/2021] [Indexed: 05/14/2023]
Abstract
Spider silk is a natural polymeric fiber with high tensile strength, toughness, and has distinct thermal, optical, and biocompatible properties. The mechanical properties of spider silk are ascribed to its hierarchical structure, including primary and secondary structures of the spidroins (spider silk proteins), the nanofibril, the "core-shell", and the "nano-fishnet" structures. In addition, spider silk also exhibits remarkable properties regarding humidity/water response, water collection, light transmission, thermal conductance, and shape-memory effect. This motivates researchers to prepare artificial functional fibers mimicking spider silk. In this review, the authors summarize the study of the structure and properties of natural spider silk, and the biomimetic preparation of artificial fibers from different types of molecules and polymers by taking some examples of artificial fibers exhibiting these interesting properties. In conclusion, biomimetic studies have yielded several noteworthy findings in artificial fibers with different functions, and this review aims to provide indications for biomimetic studies of functional fibers that approach and exceed the properties of natural spider silk.
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Affiliation(s)
- Jiatian Li
- State Key Laboratory of Medicinal Chemical BiologyCollege of Pharmacy and College of ChemistryKey Laboratory of Functional Polymer MaterialsFrontiers Science Center for New Organic MatterNankai UniversityTianjin300071China
| | - Sitong Li
- State Key Laboratory of Medicinal Chemical BiologyCollege of Pharmacy and College of ChemistryKey Laboratory of Functional Polymer MaterialsFrontiers Science Center for New Organic MatterNankai UniversityTianjin300071China
| | - Jiayi Huang
- State Key Laboratory of Medicinal Chemical BiologyCollege of Pharmacy and College of ChemistryKey Laboratory of Functional Polymer MaterialsFrontiers Science Center for New Organic MatterNankai UniversityTianjin300071China
| | - Abdul Qadeer Khan
- State Key Laboratory of Medicinal Chemical BiologyCollege of Pharmacy and College of ChemistryKey Laboratory of Functional Polymer MaterialsFrontiers Science Center for New Organic MatterNankai UniversityTianjin300071China
| | - Baigang An
- School of Chemical EngineeringUniversity of Science and Technology LiaoningAnshan114051China
| | - Xiang Zhou
- Department of ScienceChina Pharmaceutical UniversityNanjing211198China
| | - Zunfeng Liu
- State Key Laboratory of Medicinal Chemical BiologyCollege of Pharmacy and College of ChemistryKey Laboratory of Functional Polymer MaterialsFrontiers Science Center for New Organic MatterNankai UniversityTianjin300071China
- School of Chemical EngineeringUniversity of Science and Technology LiaoningAnshan114051China
| | - Meifang Zhu
- State Key Laboratory for Modification of Chemical Fibers and Polymer MaterialsCollege of Materials Science and EngineeringDonghua UniversityShanghai201620China
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14
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Li X, Qi X, Cai YM, Sun Y, Wen R, Zhang R, Johansson J, Meng Q, Chen G. Customized Flagelliform Spidroins Form Spider Silk-like Fibers at pH 8.0 with Outstanding Tensile Strength. ACS Biomater Sci Eng 2021; 8:119-127. [PMID: 34908395 PMCID: PMC8753598 DOI: 10.1021/acsbiomaterials.1c01354] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
Abstract
Spider flagelliform silk shows the best extensibility among various types of silk, but its biomimetic preparation has not been much studied. Herein, five customized flagelliform spidroins (FlSps: S and NTDFl-Sn-CTDFl, n = 1-4), in which the repetitive region (S) and N-/C- terminal domains (NTDFl and CTDFl) are from the same spidroin and spider species, were produced recombinantly. The recombinant spidroins with terminal domains were able to form silk-like fibers with diameters of ∼5 μm by manual pulling at pH 8.0, where the secondary structure transformation occurred. The silk-like fibers from NTDFl-S4-CTDFl showed the highest tensile strength (∼250 MPa), while those ones with 1-3 S broke at a similar stress (∼180 MPa), suggesting that increasing the amounts of the repetitive region can improve the tensile strength, but a certain threshold might need to be reached. This study shows successful preparation of flagelliform silk-like fibers with good mechanical properties, providing general insights into efficient biomimetic preparations of spider silks.
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Affiliation(s)
- Xue Li
- Department of Medical Ultrasound, Shanghai Tenth People's Hospital, Ultrasound Research and Education Institute, Tongji University Cancer Center, Shanghai Engineering Research Center of Ultrasound Diagnosis and Treatment, Tongji University School of Medicine, 200092 Shanghai, China.,Institute of Biological Sciences and Biotechnology, Donghua University, 201620 Shanghai, China
| | - Xingmei Qi
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou 215123, China
| | - Yu-Ming Cai
- Institute for Life Sciences, University of Southampton, SO17 1BJ Southampton, Hampshire, U.K
| | - Yuan Sun
- Institute of Biological Sciences and Biotechnology, Donghua University, 201620 Shanghai, China
| | - Rui Wen
- Institute of Biological Sciences and Biotechnology, Donghua University, 201620 Shanghai, China
| | - Rui Zhang
- Department of Pulmonary Circulation, Shanghai Pulmonary Hospital, Tongji University School of Medicine, Shanghai 200433, China
| | - Jan Johansson
- Department of Biosciences and Nutrition, Karolinska Institutet, 14157 Huddinge, Sweden
| | - Qing Meng
- Institute of Biological Sciences and Biotechnology, Donghua University, 201620 Shanghai, China
| | - Gefei Chen
- Department of Biosciences and Nutrition, Karolinska Institutet, 14157 Huddinge, Sweden
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15
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Zhang J, Jia Q, Meng E, Meng Q. Characteristics of electrospun membranes in different spidroin/PCL ratios. Biomed Mater 2021; 16. [PMID: 34584029 DOI: 10.1088/1748-605x/ac2ab7] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/07/2021] [Accepted: 09/28/2021] [Indexed: 11/11/2022]
Abstract
Spider silk is a protein fiber with the highest strength and elasticity known in nature, even higher than that of silkworm silk. It was a biological and technical reserve material with great potential. However, the low yield of natural spider silk limits the application of spider silk, and the development of genetic engineering provides opportunities for the mass production of spider silk. We constructed a mini-recombinant spidroin NRC based on spider silk gene fromAraneus ventricosusand successfully expressed it through Prokaryotic expression that provide a high production for application using electrospinning, which is a mature technique to produce micro-nano scale fibers as thin as natural spider silks. By blending the purified and lyophilized NRC with polycaprolactone (PCL) in different mass ratio for electrospinning, different electrospun membranes were obtained, and then characterized in terms of morphology, chemical structure, mechanical and Schwann cell proliferation. Compared the difference between polycaprolactone (PCL) and NRC, the fiber diameter decreased from 1.0779 μm to 0.5785 μm, water contact angel decreased from 104.1 ± 2° to 56.9 ± 5°, and elongation decreased from 240.97 ± 89% to 37.76 ± 13%, while tensile strength increased from 1.74 ± 1.2 MPa to 3.18 ± 0.9 MPa and Young's Module increased from 3.05 ± 1.6 MPa to 16.54 ± 6.7 MPa. In this study, we obtained a thinner fiber, hydrophilicity and high strengthen electrospinning spidroin contained membrane, which can also promote Schwann cell proliferation and adhesion.
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Affiliation(s)
- Jie Zhang
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai 201620, People's Republic of China
| | - Qiupin Jia
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai 201620, People's Republic of China
| | - Er Meng
- Hunan Key Laboratory of Economic Crops Genetic Improvement and Integrated Utilization, School of Life Sciences, Hunan University of Science and Technology, Xiangtan, Hunan 411201, People's Republic of China
| | - Qing Meng
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai 201620, People's Republic of China
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16
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Critical role of minor eggcase silk component in promoting spidroin chain alignment and strong fiber formation. Proc Natl Acad Sci U S A 2021; 118:2100496118. [PMID: 34531321 DOI: 10.1073/pnas.2100496118] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 08/14/2021] [Indexed: 11/18/2022] Open
Abstract
Natural spider silk with extraordinary mechanical properties is typically spun from more than one type of spidroin. Although the main components of various spider silks have been widely studied, little is known about the molecular role of the minor silk components in spidroin self-assembly and fiber formation. Here, we show that the minor component of spider eggcase silk, TuSp2, not only accelerates self-assembly but remarkably promotes molecular chain alignment of spidroins upon physical shearing. NMR structure of the repetitive domain of TuSp2 reveals that its dimeric structure with unique charged surface serves as a platform to recruit different domains of the main eggcase component TuSp1. Artificial fiber spun from the complex between TuSp1 and TuSp2 minispidroins exhibits considerably higher strength and Young's modulus than its native counterpart. These results create a framework for rationally designing silk biomaterials based on distinct roles of silk components.
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17
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Li F, Bian C, Li D, Shi Q. Spider Silks: An Overview of Their Component Proteins for Hydrophobicity and Biomedical Applications. Protein Pept Lett 2021; 28:255-269. [PMID: 32895035 DOI: 10.2174/0929866527666200907104401] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/11/2020] [Revised: 07/14/2020] [Accepted: 07/15/2020] [Indexed: 11/22/2022]
Abstract
Spider silks have received extensive attention from scientists and industries around the world because of their remarkable mechanical properties, which include high tensile strength and extensibility. It is a leading-edge biomaterial resource, with a wide range of potential applications. Spider silks are composed of silk proteins, which are usually very large molecules, yet many silk proteins still remain largely underexplored. While there are numerous reviews on spider silks from diverse perspectives, here we provide a most up-to-date overview of the spider silk component protein family in terms of its molecular structure, evolution, hydrophobicity, and biomedical applications. Given the confusion regarding spidroin naming, we emphasize the need for coherent and consistent nomenclature for spidroins and provide recommendations for pre-existing spidroin names that are inconsistent with nomenclature. We then review recent advances in the components, identification, and structures of spidroin genes. We next discuss the hydrophobicity of spidroins, with particular attention on the unique aquatic spider silks. Aquatic spider silks are less known but may inspire innovation in biomaterials. Furthermore, we provide new insights into antimicrobial peptides from spider silk glands. Finally, we present possibilities for future uses of spider silks.
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Affiliation(s)
- Fan Li
- BGI Education Center, University of Chinese Academy of Sciences, Shenzhen, China
| | - Chao Bian
- BGI Education Center, University of Chinese Academy of Sciences, Shenzhen, China
| | - Daiqin Li
- Department of Biological Sciences, National University of Singapore, Singapore
| | - Qiong Shi
- BGI Education Center, University of Chinese Academy of Sciences, Shenzhen, China
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18
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Wang J, Yuan W, Qin R, Fan T, Fan JS, Huang W, Yang D, Lin Z. Self-assembly of tubuliform spidroins driven by hydrophobic interactions among terminal domains. Int J Biol Macromol 2020; 166:1141-1148. [PMID: 33157141 DOI: 10.1016/j.ijbiomac.2020.10.269] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/10/2020] [Revised: 09/01/2020] [Accepted: 10/31/2020] [Indexed: 11/26/2022]
Abstract
Spider silk has remarkable physical and biocompatible properties. Investigation of structure-function relationship and self-assembly process of spidroins is necessary for uncovering the mechanism of silk fiber formation. Nevertheless, how the terminal domains initiate self-assembly of soluble tubuliform spidroins to form solid eggcase silk is still not fully understood. Here we investigate the roles of both terminal domains of tubuliform spidroin 1 (TuSp1) in the silk fiber formation. We found that interactions among the terminal domains drive rapid TuSp1 self-assembly and fiber formation, which is insensitive to pH changes from 6.0 to 7.0. These interactions also contribute to the spidroin chain alignment in fiber formation upon shear-force exposure. Structural analysis and site-directed mutagenesis identified eight critical surface-exposed residues involved in hydrophobic interactions among terminal domains. Spidroins with single-point mutations of these residues fail to form intermediate micelle-like structures. The structural docking model indicates that multiple terminal domains of TuSp1 may interact with each other based on hydrophobic interactions and surface complementarity, which may lead to forming the surface of the micelle-like structure. Our results provide new insights into the structural mechanism of eggcase silk formation and the basis for designing and producing novel biomaterials derived from spider eggcase silk.
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Affiliation(s)
- Jingxia Wang
- School of Life Sciences, Tianjin University, Tianjin 300072, PR China; Tianjin Key Laboratory of Function and Application of Biological Macromolecular Structures, School of Life Sciences, Tianjin University, Tianjin 300072, PR China
| | - Wensu Yuan
- School of Life Sciences, Tianjin University, Tianjin 300072, PR China; Tianjin Key Laboratory of Function and Application of Biological Macromolecular Structures, School of Life Sciences, Tianjin University, Tianjin 300072, PR China
| | - Ruiqi Qin
- School of Life Sciences, Tianjin University, Tianjin 300072, PR China; Tianjin Key Laboratory of Function and Application of Biological Macromolecular Structures, School of Life Sciences, Tianjin University, Tianjin 300072, PR China
| | - Tiantian Fan
- School of Life Sciences, Tianjin University, Tianjin 300072, PR China; Tianjin Key Laboratory of Function and Application of Biological Macromolecular Structures, School of Life Sciences, Tianjin University, Tianjin 300072, PR China
| | - Jing-Song Fan
- Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, 117543, Singapore
| | - Weidong Huang
- Department of Biochemistry and Molecular Biology, School of Basic Medicine, Ningxia Medical University, Yinchuan, Ningxia, 750004, PR China
| | - Daiwen Yang
- Department of Biological Sciences, National University of Singapore, 14 Science Drive 4, 117543, Singapore
| | - Zhi Lin
- School of Life Sciences, Tianjin University, Tianjin 300072, PR China; Tianjin Key Laboratory of Function and Application of Biological Macromolecular Structures, School of Life Sciences, Tianjin University, Tianjin 300072, PR China.
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19
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Wen R, Wang K, Meng Q. Characterization of the second type of aciniform spidroin (AcSp2) provides new insight into design for spidroin-based biomaterials. Acta Biomater 2020; 115:210-219. [PMID: 32798722 DOI: 10.1016/j.actbio.2020.08.009] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2020] [Revised: 08/01/2020] [Accepted: 08/05/2020] [Indexed: 12/23/2022]
Abstract
Spiders spin a range of silks from different glands for distinct functions, and each silk type exhibits distinct material properties. Silk extruded by the aciniform gland is used for prey wrapping and egg case construction and displays high toughness and extensibility. So far, only the aciniform spidroin 1 (AcSp1) gene which was firstly identified as a silk gene in aciniform gland has been obtained. Here we present the gene sequence for the second type of full-length aciniform silk protein, AcSp2. Analysis of the AcSp2 primary sequence reveals relatively conserved terminal regions and a distinct repetitive sequence relative to AcSp1. A fraction of the gene can be expressed in recombinant systems. Secondary structure analysis of the recombinant AcSp2 protein in solution reveals that the protein adopts mainly an α-helical conformation. Artificial spinning of recombinant AcSp2 demonstrates that the spidroins can be spun into fine fibers which display up to 142% extensibility. The silk fibers are dominated by β-sheet and β-turn secondary structures. Moreover, the mechanical data collected from these synthetic fibers revealed that the mechanical properties are partly correlated with the molecular weights. Overall, our studies enrich our knowledge of spidroin gene family members and provide a new insight into creation of high-performance silk fibers for next generation biomaterials. STATEMENT OF SIGNIFICANCE: In this study, we presented the second type of aciniform silk protein (AcSp2) gene sequence of orb-weaving spider Araneus ventricosus, expanding the spider silk gene family members. The primary structure revealed the central repetitive sequence of the new spidroin gene is distinctly different from other AcSp1 genes. Characterization of the recombinant minispidroin fibers of AcSp2 revealed the mechanical properties are partly correlate with the molecular weights, and the spidroins can be spun into fine fibers which display up to 142% extensibility. Overall, our studies enrich our knowledge of spidroin gene family members and provide a new insight into creation of high-performance silk fibers for next generation biomaterials.
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Affiliation(s)
- Rui Wen
- Institute of Biological Sciences and Biotechnology, Donghua University, 2999 North Renmin Road 201620, Shanghai 201620, China
| | - Kangkang Wang
- Institute of Biological Sciences and Biotechnology, Donghua University, 2999 North Renmin Road 201620, Shanghai 201620, China
| | - Qing Meng
- Institute of Biological Sciences and Biotechnology, Donghua University, 2999 North Renmin Road 201620, Shanghai 201620, China.
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20
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Novel Highly Soluble Chimeric Recombinant Spidroins with High Yield. Int J Mol Sci 2020; 21:ijms21186905. [PMID: 32962298 PMCID: PMC7554824 DOI: 10.3390/ijms21186905] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2020] [Revised: 09/18/2020] [Accepted: 09/18/2020] [Indexed: 11/21/2022] Open
Abstract
Spider silk has been a hotspot in the study of biomaterials for more than two decades due to its outstanding mechanical properties. Given that spiders cannot be farmed, and their low silk productivity, many attempts have been made to produce recombinant spidroins as an alternative. Herein, we present novel chimeric recombinant spidroins composed of 1 to 4 repetitive units of aciniform spidroin (AcSp) flanked by the nonrepetitive N- and C-terminal domains of the minor ampullate spidroin (MiSp), all from Araneus ventricosus. The spidroins were expressed in the form of inclusion body in E. coli with high yield. Remarkably, the aqueous solubility of the four spidroins ranged from 13.4% to over 50% (m/v). The four spidroins could self-assemble into silk-like fibers by hand-drawing. The secondary structures of these proteins, determined by circular dichroism spectrum (CD) and Fourier transform infrared spectrum (FTIR), indicated a prominent transformation from α-helix to β-sheet after fiber formation. The mechanical properties of the hand-drawn fibers showed a positive correlation with the spidroin molecular weight. In summary, this study describes promising biomaterials for further study and wide application.
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21
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Gu Y, Yu L, Mou J, Wu D, Zhou P, Xu M. Mechanical properties and application analysis of spider silk bionic material. E-POLYMERS 2020. [DOI: 10.1515/epoly-2020-0049] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/28/2023]
Abstract
AbstractSpider silk is a kind of natural biomaterial with superior performance. Its mechanical properties and biocompatibility are incomparable with those of other natural and artificial materials. This article first summarizes the structure and the characteristics of natural spider silk. It shows the great research value of spider silk and spider silk bionic materials. Then, the development status of spider silk bionic materials is reviewed from the perspectives of material mechanical properties and application. The part of the material characteristics mainly describes the biocomposites based on spider silk proteins and spider silk fibers, nanomaterials and man-made fiber materials based on spider silk and spider-web structures. The principles and characteristics of new materials and their potential applications in the future are described. In addition, from the perspective of practical applications, the latest application of spider silk biomimetic materials in the fields of medicine, textiles, and sensors is reviewed, and the inspiration, feasibility, and performance of finished products are briefly introduced and analyzed. Finally, the research directions and future development trends of spider silk biomimetic materials are prospected.
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Affiliation(s)
- Yunqing Gu
- College of Metrology & Measurement Engineering, China Jiliang University, Hangzhou, 310018, China
| | - Lingzhi Yu
- College of Metrology & Measurement Engineering, China Jiliang University, Hangzhou, 310018, China
| | - Jiegang Mou
- College of Metrology & Measurement Engineering, China Jiliang University, Hangzhou, 310018, China
| | - Denghao Wu
- College of Metrology & Measurement Engineering, China Jiliang University, Hangzhou, 310018, China
| | - Peijian Zhou
- College of Metrology & Measurement Engineering, China Jiliang University, Hangzhou, 310018, China
| | - Maosen Xu
- College of Metrology & Measurement Engineering, China Jiliang University, Hangzhou, 310018, China
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22
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Greving I, Terry AE, Holland C, Boulet-Audet M, Grillo I, Vollrath F, Dicko C. Structural Diversity of Native Major Ampullate, Minor Ampullate, Cylindriform, and Flagelliform Silk Proteins in Solution. Biomacromolecules 2020; 21:3387-3393. [PMID: 32551521 PMCID: PMC7421538 DOI: 10.1021/acs.biomac.0c00819] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/27/2020] [Revised: 06/17/2020] [Indexed: 01/23/2023]
Abstract
The foundations of silk spinning, the structure, storage, and activation of silk proteins, remain highly debated. By combining solution small-angle neutron and X-ray scattering (SANS and SAXS) alongside circular dichroism (CD), we reveal a shape anisotropy of the four principal native spider silk feedstocks from Nephila edulis. We show that these proteins behave in solution like elongated semiflexible polymers with locally rigid sections. We demonstrated that minor ampullate and cylindriform proteins adopt a monomeric conformation, while major ampullate and flagelliform proteins have a preference for dimerization. From an evolutionary perspective, we propose that such dimerization arose to help the processing of disordered silk proteins. Collectively, our results provide insights into the molecular-scale processing of silk, uncovering a degree of evolutionary convergence in protein structures and chemistry that supports the macroscale micellar/pseudo liquid crystalline spinning mechanisms proposed by the community.
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Affiliation(s)
- Imke Greving
- Institute
of Materials Research, Helmholtz Zentrum
Geesthacht, 21502 Geesthacht, Germany
| | - Ann E. Terry
- MAX IV Laboratory, 224 84 Lund, Sweden
- Lund
Institute of Advanced Neutron and X-ray Science, 223 70 Lund, Sweden
| | - Chris Holland
- Department
of Materials Science and Engineering, The
University of Sheffield, Sheffield S1 3JD, United Kingdom
| | | | | | - Fritz Vollrath
- Department
of Zoology, University of Oxford, Mansfield Road, Oxford OX1 3SZ, United
Kingdom
| | - Cedric Dicko
- Pure
and
Applied Biochemistry, Department of Chemistry, Lund University, SE-221 00 Lund, Sweden
- Lund
Institute of Advanced Neutron and X-ray Science, 223 70 Lund, Sweden
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23
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Cai H, Chen G, Yu H, Tang Y, Xiong S, Qi X. One-step heating strategy for efficient solubilization of recombinant spider silk protein from inclusion bodies. BMC Biotechnol 2020; 20:37. [PMID: 32650749 PMCID: PMC7350728 DOI: 10.1186/s12896-020-00630-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/12/2020] [Accepted: 07/02/2020] [Indexed: 11/18/2022] Open
Abstract
Background Spider silk is a proteinaceous fiber with remarkable mechanical properties spun from spider silk proteins (spidroins). Engineering spidroins have been successfully produced in a variety of heterologous hosts and the most widely used expression system is Escherichia coli (E. coli). So far, recombinantly expressed spidroins often form insoluble inclusion bodies (IBs), which will often be dissolved under extremely harsh conditions in a traditional manner, e.g. either 8 mol/L urea or 6 mol/L guanidine hydrochloride, highly risking to poor recovery of bioactive proteins as well as unexpected precipitations during dialysis process. Results Here, we present a mild solubilization strategy—one-step heating method to solubilize spidroins from IBs, with combining spidroins’ high thermal stability with low concentration of urea. A 430-aa recombinant protein (designated as NM) derived from the minor ampullate spidroin of Araneus ventricosus was expressed in E. coli, and the recombinant proteins were mainly present in insoluble fraction as IBs. The isolated IBs were solubilized parallelly by both traditional urea-denatured method and one-step heating method, respectively. The solubilization efficiency of NM IBs in Tris-HCl pH 8.0 containing 4 mol/L urea by one-step heating method was already comparable to that of 7 mol/L urea with using traditional urea-denatured method. The effects of buffer, pH and temperature conditions on NM IBs solubilization of one-step heating method were evaluated, respectively, based on which the recommended conditions are: heating temperature 70–90 °C for 20 min, pH 7.0–10, urea concentration 2–4 mol/L in normal biological buffers. The recombinant NM generated via the one-step heating method held the potential functions with self-assembling into sphere nanoparticles with smooth morphology. Conclusions The one-step heating method introduced here efficiently solubilizes IBs under relatively mild conditions compared to the traditional ones, which might be important for the downstream applications; however, this protocol should be pursued carefully in terms of urea-induced modification sensitive applications. Further, this method can be applied under broad buffer, pH and temperature conditions, conferring the potential to apply to other thermal stable proteins.
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Affiliation(s)
- Hui Cai
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou, 215123, Jiangsu, China
| | - Gefei Chen
- Department of Neurobiology, Care Sciences and Society, Center for Alzheimer Research, Division of Neurogeriatrics, Karolinska Institutet, 14157, Huddinge, Sweden
| | - Hairui Yu
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou, 215123, Jiangsu, China
| | - Ying Tang
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou, 215123, Jiangsu, China
| | - Sidong Xiong
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou, 215123, Jiangsu, China.
| | - Xingmei Qi
- The Jiangsu Key Laboratory of Infection and Immunity, Institutes of Biology and Medical Sciences, Soochow University, Suzhou, 215123, Jiangsu, China.
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24
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Wen R, Wang K, Meng Q. Two novel tubuliform silk gene sequences from Araneus ventricosus provide evidence for multiple loci in genome. Int J Biol Macromol 2020; 160:806-813. [PMID: 32446899 DOI: 10.1016/j.ijbiomac.2020.05.141] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/04/2020] [Revised: 05/06/2020] [Accepted: 05/18/2020] [Indexed: 12/29/2022]
Abstract
Spiders produce a diversity of silk fibers from multiple morphologically distinct silk glands for specific tasks, and each silk type primarily composed of one or more particular silk proteins encoded by silk gene family members believed to generated by duplication and divergence of ancient silk genes. Egg case silks spun from tubuliform glands are used to construct the tough outer structure of egg cases, are important for their reproduction. Here we present two novel complete TuSp1 sequences from orb weaving spider Araneus ventricosus. Alignment of the two spidroin iterated repeats showed both extreme intragenic homogenization. The pairwise Ka/Ks analysis revealed the terminal and repetitive regions for three TuSp1 loci including the reported TuSp1 gene are all under purifying selection. Phylogenetic analysis showed the two new TuSp1 variants could derive from recent duplication events.
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Affiliation(s)
- Rui Wen
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai, People's Republic of China
| | - Kangkang Wang
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai, People's Republic of China
| | - Qing Meng
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai, People's Republic of China.
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25
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Wen R, Wang K, Meng Q. The three novel complete aciniform spidroin variants from Araneus ventricosus reveal diversity of gene sequences within specific spidroin type. Int J Biol Macromol 2020; 157:60-66. [PMID: 32335120 DOI: 10.1016/j.ijbiomac.2020.04.142] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2020] [Revised: 04/17/2020] [Accepted: 04/18/2020] [Indexed: 12/24/2022]
Abstract
Orb-weaving spiders produce multiple types of silks with distinct functions and material features, and all these silks are mainly composed of proteins which encoded by specific spidroin (spider silk protein) gene family members. Moreover, nearly all spidroins have evolved one or more variants within specific-species. However, the majority of variant sequences are fragmentary, limiting us to investigate the molecular structures and evolution relationships between spidroin variant genes. As the silk that is used to wrap prey and form an egg case liner, aciniform silk is given high toughness and tensile strength. To date, only one aciniform spidroin 1 (AcSp1) gene sequence from orb weavers Araneus ventricosus was reported, and it is still unknown whether presence of multiple AcSp1 variants in this species. Here, we present three novel complete AcSp1 variant gene sequences from Araneus ventricosus. The primary structures revealed the varying length of these variants, and partial repetitive sequences of two AcSp1 variants were deleted. Phylogenetic analysis showed AcSp1 seems to undergo multiple rounds of gene duplication, and the AcSp1-v4 likely originates from a recent duplication event. In brief, the generation of multiple AcSp1 variant genes contributes to transcript diversification and could result in varying tensile properties of aciniform silks.
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Affiliation(s)
- Rui Wen
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai, People's Republic of China
| | - Kangkang Wang
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai, People's Republic of China
| | - Qing Meng
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai, People's Republic of China.
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26
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Zhou Y, Shen Q, Lin Y, Xu S, Meng Q. Evaluation of the potential of chimeric spidroins/poly(L-lactic-co-ε-caprolactone) (PLCL) nanofibrous scaffolds for tissue engineering. MATERIALS SCIENCE & ENGINEERING. C, MATERIALS FOR BIOLOGICAL APPLICATIONS 2020; 111:110752. [PMID: 32279827 DOI: 10.1016/j.msec.2020.110752] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/06/2019] [Revised: 11/25/2019] [Accepted: 02/15/2020] [Indexed: 12/31/2022]
Abstract
In this study, a novel type of chimeric spider silk proteins (spidroins) NTW1-4CT was blended with poly(L-lactic-co-ε-caprolactone) (PLCL) to obtain nanofibrous scaffolds via electrospinning. Spidroins are composed of a N-terminal module (NT) from major ampullate spidroins, a C-terminal module (CT) from minor ampullate spidroins and 1-4 repeat modules (W) from aciniform spidroins. Physical characteristics and structures of NTW1-4CT/PLCL (25/75, w/w) blend scaffolds were carried out by scanning electron microscope (SEM), water contact angles measurements, Fourier transform infrared (FTIR) spectroscopy and tensile mechanical tests. Results showed that blending with spidroins decreased diameters of nanofibers and increased porosity and wettability of scaffolds. Additionally, chimeric spidroins undergone a similar structural transition in electrospinning process as with the formation process of native and artificial spider silks from other spidroins. With amounts of W modules increasing, the tensile strength and elongation of blend scaffolds were also increased. Particularly, NTW4CT/PLCL (25/75) scaffolds revealed much higher breaking stress than pure PLCL scaffolds. In vitro experiments, human umbilical vein endothelial cells (HUVEC) cultured on NTW4CT/PLCL (25/75) scaffolds displayed significantly higher activity of proliferation and adhesion than on pure PLCL scaffolds. All results suggested that chimeric spidroins/PLCL, especially NTW4CT/PLCL (25/75) blend nanofibrous scaffolds had promising potential for vascular tissue engineering.
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Affiliation(s)
- Yizhong Zhou
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai 201620, PR China
| | - Qingchun Shen
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai 201620, PR China
| | - Ying Lin
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai 201620, PR China
| | - Shouying Xu
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai 201620, PR China
| | - Qing Meng
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai 201620, PR China.
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27
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High-yield Production of Amyloid-β Peptide Enabled by a Customized Spider Silk Domain. Sci Rep 2020; 10:235. [PMID: 31937841 PMCID: PMC6959368 DOI: 10.1038/s41598-019-57143-x] [Citation(s) in RCA: 43] [Impact Index Per Article: 8.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2019] [Accepted: 12/18/2019] [Indexed: 01/12/2023] Open
Abstract
During storage in the silk gland, the N-terminal domain (NT) of spider silk proteins (spidroins) keeps the aggregation-prone repetitive region in solution at extreme concentrations. We observe that NTs from different spidroins have co-evolved with their respective repeat region, and now use an NT that is distantly related to previously used NTs, for efficient recombinant production of the amyloid-β peptide (Aβ) implicated in Alzheimer’s disease. A designed variant of NT from Nephila clavipes flagelliform spidroin, which in nature allows production and storage of β-hairpin repeat segments, gives exceptionally high yields of different human Aβ variants as a solubility tag. This tool enables efficient production of target peptides also in minimal medium and gives up to 10 times more isotope-labeled monomeric Aβ peptides per liter bacterial culture than previously reported.
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28
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Orb-weaving spider Araneus ventricosus genome elucidates the spidroin gene catalogue. Sci Rep 2019; 9:8380. [PMID: 31182776 PMCID: PMC6557832 DOI: 10.1038/s41598-019-44775-2] [Citation(s) in RCA: 67] [Impact Index Per Article: 11.2] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/11/2019] [Accepted: 05/22/2019] [Indexed: 02/02/2023] Open
Abstract
Members of the family Araneidae are common orb-weaving spiders, and they produce several types of silks throughout their behaviors and lives, from reproduction to foraging. Egg sac, prey capture thread, or dragline silk possesses characteristic mechanical properties, and its variability makes it a highly attractive material for ecological, evolutional, and industrial fields. However, the complete set of constituents of silks produced by a single species is still unclear, and novel spidroin genes as well as other proteins are still being found. Here, we present the first genome in genus Araneus together with the full set of spidroin genes with unamplified long reads and confirmed with transcriptome of the silk glands and proteome analysis of the dragline silk. The catalogue includes the first full length sequence of a paralog of major ampullate spidroin MaSp3, and several spider silk-constituting elements designated SpiCE. Family-wide phylogenomic analysis of Araneidae suggests the relatively recent acquisition of these genes, and multiple-omics analyses demonstrate that these proteins are critical components in the abdominal spidroin gland and dragline silk, contributing to the outstanding mechanical properties of silk in this group of species.
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29
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Toward Spider Glue: Long Read Scaffolding for Extreme Length and Repetitious Silk Family Genes AgSp1 and AgSp2 with Insights into Functional Adaptation. G3-GENES GENOMES GENETICS 2019; 9:1909-1919. [PMID: 30975702 PMCID: PMC6553539 DOI: 10.1534/g3.119.400065] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
An individual orb weaving spider can spin up to seven different types of silk, each with unique functions and material properties. The capture spiral silk of classic two-dimensional aerial orb webs is coated with an amorphous glue that functions to retain prey that get caught in a web. This unique modified silk is partially comprised of spidroins (spider fibroins) encoded by two members of the silk gene family. The glue differs from solid silk fibers as it is a viscoelastic, amorphic, wet material that is responsive to environmental conditions. Most spidroins are encoded by extremely large, highly repetitive genes that cannot be sequenced using short read technology alone, as the repetitive regions are longer than read length. We sequenced for the first time the complete genomic Aggregate Spidroin 1 (AgSp1) and Aggregate Spidroin 2 (AgSp2) glue genes of orb weaving spider Argiope trifasciata using error-prone long reads to scaffold for high accuracy short reads. The massive coding sequences are 42,270 bp (AgSp1) and 20,526 bp (AgSp2) in length, the largest silk genes currently described. The majority of the predicted amino acid sequence of AgSp1 consists of two similar but distinct motifs that are repeated ∼40 times each, while AgSp2 contains ∼48 repetitions of an AgSp1-similar motif, interspersed by regions high in glutamine. Comparisons of AgSp repetitive motifs from orb web and cobweb spiders show regions of strict conservation followed by striking diversification. Glues from these two spider families have evolved contrasting material properties in adhesion (stickiness), extensibility (stretchiness), and elasticity (the ability of the material to resume its native shape), which we link to mechanisms established for related silk genes in the same family. Full-length aggregate spidroin sequences from diverse species with differing material characteristics will provide insights for designing tunable bio-inspired adhesives for a variety of unique purposes.
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30
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Analysis of the Full-Length Pyriform Spidroin Gene Sequence. Genes (Basel) 2019; 10:genes10060425. [PMID: 31163680 PMCID: PMC6627382 DOI: 10.3390/genes10060425] [Citation(s) in RCA: 18] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/24/2019] [Revised: 05/29/2019] [Accepted: 05/29/2019] [Indexed: 02/02/2023] Open
Abstract
Spiders often produce multiple types of silk, each with unique properties suiting them to certain tasks and biological functions. Orb-weaver spiders can generate more than six types of silk fibroins, with pyriform silk used to form attachment discs, adhering silk to other surfaces and substances. The unique higher-order structuring of silk fibroins has been cited as the source of their remarkable biomechanical properties. Even so, only one full-length gene sequence of pyriform silk protein 1 (PySp1) from Argiopeargentata has been reported, and studies on the mechanical properties of natural pyriform silk fibers are also lacking. To better understand the PySp1 family of genes, we used long-distance PCR (LD-PCR) to determine the sequence of PySp1 in the Araneusventricosus species. This full-length PySp1 gene is 11,931 bp in length, encoding for 3976 amino acids residues in non-repetitive N- and C-terminal domains with a central largely repetitive region made up of sixteen remarkably homogeneous units. This was similar to the previously reported A. argentata PySp1 sequence, with PySp1 from A. ventricosus also having a long repetitive N-linker that bridges the N-terminal and repetitive regions. Predictions of secondary structure and hydrophobicity of A. ventricosus PySp1 showed the pyriform silk fiber's functional properties. The amino acid compositions of PySp1 is obviously distinct from other spidroins. Our sequence makes an important contribution to understand pyriform silk protein structure and also provides a new template for recombinant pyriform silk proteins with attractive properties.
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31
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Kono N, Arakawa K. Nanopore sequencing: Review of potential applications in functional genomics. Dev Growth Differ 2019; 61:316-326. [DOI: 10.1111/dgd.12608] [Citation(s) in RCA: 164] [Impact Index Per Article: 27.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/18/2019] [Revised: 03/26/2019] [Accepted: 03/26/2019] [Indexed: 12/17/2022]
Affiliation(s)
- Nobuaki Kono
- Institute for Advanced Biosciences Keio University Tsuruoka Yamagata Japan
| | - Kazuharu Arakawa
- Institute for Advanced Biosciences Keio University Tsuruoka Yamagata Japan
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32
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Correa-Garhwal SM, Chaw RC, Dugger T, Clarke TH, Chea KH, Kisailus D, Hayashi CY. Semi-aquatic spider silks: transcripts, proteins, and silk fibres of the fishing spider, Dolomedes triton (Pisauridae). INSECT MOLECULAR BIOLOGY 2019; 28:35-51. [PMID: 30059178 DOI: 10.1111/imb.12527] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/08/2023]
Abstract
To survive in terrestrial and aquatic environments, spiders often rely heavily on their silk. The vast majority of silks that have been studied are from orb-web or cob-web weaving species, leaving the silks of water-associated spiders largely undescribed. We characterize transcripts, proteins, and silk fibres from the semi-aquatic spider Dolomedes triton. From silk gland RNAseq libraries, we report 18 silk transcripts representing four categories of known silk protein types: aciniform, ampullate, pyriform, and tubuliform. Proteomic and structural analyses (scanning electron microscopy, energy dispersive X-ray spectrometry, contact angle) of the D. triton submersible egg sac reveal similarities to silks from aquatic caddisfly larvae. We identified two layers in D. triton egg sacs, notably a highly hydrophobic outer layer with a different elemental composition compared to egg sacs of terrestrial spiders. These features may provide D. triton egg sacs with their water repellent properties.
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Affiliation(s)
- S M Correa-Garhwal
- Department of Evolution, Ecology, and Organismal Biology, University of California, Riverside, CA, USA
| | - R C Chaw
- Department of Evolution, Ecology, and Organismal Biology, University of California, Riverside, CA, USA
- Department of Neurology, Oregon Health and Science University, Portland, OR, USA
| | - T Dugger
- Materials Science and Engineering Program, University of California, Riverside, CA, USA
| | - T H Clarke
- Department of Evolution, Ecology, and Organismal Biology, University of California, Riverside, CA, USA
- J. Craig Venter Institute, Rockville, MD, USA
| | - K H Chea
- Materials Science and Engineering Program, University of California, Riverside, CA, USA
| | - D Kisailus
- Materials Science and Engineering Program, University of California, Riverside, CA, USA
- Department of Chemical and Environmental Engineering, University of California, Riverside, CA, USA
| | - C Y Hayashi
- Department of Evolution, Ecology, and Organismal Biology, University of California, Riverside, CA, USA
- Division of Invertebrate Zoology and Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, NY, USA
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33
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Wen R, Wang K, Liu X, Li X, Mi J, Meng Q. Molecular cloning and analysis of the full-length aciniform spidroin gene from Araneus ventricosus. Int J Biol Macromol 2018; 117:1352-1360. [DOI: 10.1016/j.ijbiomac.2017.12.090] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2017] [Revised: 12/16/2017] [Accepted: 12/16/2017] [Indexed: 11/19/2022]
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34
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Silk genes and silk gene expression in the spider Tengella perfuga (Zoropsidae), including a potential cribellar spidroin (CrSp). PLoS One 2018; 13:e0203563. [PMID: 30235223 PMCID: PMC6147414 DOI: 10.1371/journal.pone.0203563] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/04/2018] [Accepted: 07/27/2018] [Indexed: 12/21/2022] Open
Abstract
Most spiders spin multiple types of silk, including silks for reproduction, prey capture, and draglines. Spiders are a megadiverse group and the majority of spider silks remain uncharacterized. For example, nothing is known about the silk molecules of Tengella perfuga, a spider that spins sheet webs lined with cribellar silk. Cribellar silk is a type of adhesive capture thread composed of numerous fibrils that originate from a specialized plate-like spinning organ called the cribellum. The predominant components of spider silks are spidroins, members of a protein family synthesized in silk glands. Here, we use silk gland RNA-Seq and cDNA libraries to infer T. perfuga silks at the protein level. We show that T. perfuga spiders express 13 silk transcripts representing at least five categories of spider silk proteins (spidroins). One category is a candidate for cribellar silk and is thus named cribellar spidroin (CrSp). Studies of ontogenetic changes in web construction and spigot morphology in T. perfuga have documented that after sexual maturation, T. perfuga females continue to make capture webs but males halt web maintenance and cease spinning cribellar silk. Consistent with these observations, our candidate CrSp was expressed only in females. The other four spidroin categories correspond to paralogs of aciniform, ampullate, pyriform, and tubuliform spidroins. These spidroins are associated with egg sac and web construction. Except for the tubuliform spidroin, the spidroins from T. perfuga contain novel combinations of amino acid sequence motifs that have not been observed before in these spidroin types. Characterization of T. perfuga silk genes, particularly CrSp, expand the diversity of the spidroin family and inspire new structure/function hypotheses.
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35
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Zheng K, Ling S. De Novo Design of Recombinant Spider Silk Proteins for Material Applications. Biotechnol J 2018; 14:e1700753. [PMID: 29781251 DOI: 10.1002/biot.201700753] [Citation(s) in RCA: 21] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/21/2018] [Revised: 04/22/2018] [Indexed: 01/08/2023]
Abstract
Spider silks are well known for their superior mechanical properties that are stronger and tougher than steel despite being assembled at close to ambient conditions and using water as the solvent. However, it is a significant challenge to utilize spider silks for practical applications due to their limited sources. Fortunately, genetic engineering techniques offer a promising approach to produce useable amounts of spider silk variants. Starting from these recombinant spider silk proteins, a series of experiments and simulations strategies are developed to improve the recombinant spider silk proteins (RSSP) material design and fabrication with the aim of biomimicking the structure-property-function relationships of spider silks. Accordingly, in this review, the authors first introduce the structure-property-function relationship of spider silks. Then, the recent progress in the genetic synthesis of RSSPs is discussed and their related multiscale self-assembly behaviors is summarized. Finally, the authors outline works utilizing multiscale modeling to assist RSSP material design.
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Affiliation(s)
- Ke Zheng
- School of Physical Science and Technology, ShanghaiTech University, Shanghai, 201210, China
| | - Shengjie Ling
- School of Physical Science and Technology, ShanghaiTech University, Shanghai, 201210, China
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36
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Zhou Y, Rising A, Johansson J, Meng Q. Production and Properties of Triple Chimeric Spidroins. Biomacromolecules 2018; 19:2825-2833. [DOI: 10.1021/acs.biomac.8b00402] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/19/2022]
Affiliation(s)
- Yizhong Zhou
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai 201620, People’s Republic of China
| | - Anna Rising
- Department of Anatomy, Physiology and Biochemistry, Swedish University of Agricultural Sciences, Uppsala, Sweden
- Department of Neurobiology, Care Sciences and Society (NVS), Karolinska Institutet, Stockholm, Sweden
| | - Jan Johansson
- Department of Neurobiology, Care Sciences and Society (NVS), Karolinska Institutet, Stockholm, Sweden
| | - Qing Meng
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai 201620, People’s Republic of China
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37
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Chaw RC, Collin M, Wimmer M, Helmrick KL, Hayashi CY. Egg Case Silk Gene Sequences from Argiope Spiders: Evidence for Multiple Loci and a Loss of Function Between Paralogs. G3 (BETHESDA, MD.) 2018; 8:231-238. [PMID: 29127108 PMCID: PMC5765351 DOI: 10.1534/g3.117.300283] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/19/2017] [Accepted: 11/08/2017] [Indexed: 12/22/2022]
Abstract
Spiders swath their eggs with silk to protect developing embryos and hatchlings. Egg case silks, like other fibrous spider silks, are primarily composed of proteins called spidroins (spidroin = spider-fibroin). Silks, and thus spidroins, are important throughout the lives of spiders, yet the evolution of spidroin genes has been relatively understudied. Spidroin genes are notoriously difficult to sequence because they are typically very long (≥ 10 kb of coding sequence) and highly repetitive. Here, we investigate the evolution of spider silk genes through long-read sequencing of Bacterial Artificial Chromosome (BAC) clones. We demonstrate that the silver garden spider Argiope argentata has multiple egg case spidroin loci with a loss of function at one locus. We also use degenerate PCR primers to search the genomic DNA of congeneric species and find evidence for multiple egg case spidroin loci in other Argiope spiders. Comparative analyses show that these multiple loci are more similar at the nucleotide level within a species than between species. This pattern is consistent with concerted evolution homogenizing gene copies within a genome. More complicated explanations include convergent evolution or recent independent gene duplications within each species.
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Affiliation(s)
- R Crystal Chaw
- Department of Biology, University of California, Riverside, California 92521
| | - Matthew Collin
- Department of Biology, University of California, Riverside, California 92521
| | - Marjorie Wimmer
- Department of Biology, University of California, Riverside, California 92521
| | - Kara-Leigh Helmrick
- Department of Biology, University of California, Riverside, California 92521
| | - Cheryl Y Hayashi
- Department of Biology, University of California, Riverside, California 92521
- Division of Invertebrate Zoology, American Museum of Natural History, New York, New York 10024
- Sackler Institute for Comparative Genomics, American Museum of Natural History, New York, New York 10024
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38
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Wen R, Liu X, Meng Q. Characterization of full-length tubuliform spidroin gene from Araneus ventricosus. Int J Biol Macromol 2017; 105:702-710. [DOI: 10.1016/j.ijbiomac.2017.07.086] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/20/2017] [Revised: 06/12/2017] [Accepted: 07/13/2017] [Indexed: 10/19/2022]
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39
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From EST to novel spider silk gene identification for production of spidroin-based biomaterials. Sci Rep 2017; 7:13354. [PMID: 29042670 PMCID: PMC5645381 DOI: 10.1038/s41598-017-13876-1] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/12/2017] [Accepted: 10/03/2017] [Indexed: 11/09/2022] Open
Abstract
A cDNA library from a pool of all the seven silk glands from a tropical spider species was constructed. More than 1000 expressed sequence tag (EST) clones were created. Almost 65% of the EST clones were identified and around 50% were annotated. The cellular and functional distribution of the EST clones indicated high protein synthesis activity in spider silk glands. Novel clones with repetitive amino acid sequences, which is one of the most important characteristics of spider silk genes, were isolated. One of these clones, namely TuSp2 in current research, contains two almost identical fragments with one short C-terminal domain. Reverse transcription (RT) PCR and expression analysis showed that it is expressed in the tubuliform gland and involved in eggcase silk formation. Furthermore, its single repetitive domain can be induced to form various types of materials, including macroscopic fibers, transparent film and translucent hydrogel. This study implies promising potentials for future identification of novel spidroins and development of new spidroin-based biomaterials.
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Xu L, Lefèvre T, Orrell KE, Meng Q, Auger M, Liu XQ, Rainey JK. Structural and Mechanical Roles for the C-Terminal Nonrepetitive Domain Become Apparent in Recombinant Spider Aciniform Silk. Biomacromolecules 2017; 18:3678-3686. [PMID: 28934550 DOI: 10.1021/acs.biomac.7b01057] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/04/2023]
Abstract
Spider aciniform (or wrapping) silk is the toughest of the seven types of spider silks/glue due to a combination of high elasticity and strength. Like most spider silk proteins (spidroins), aciniform spidroin (AcSp1) has a large core repetitive domain flanked by relatively short N- and C-terminal nonrepetitive domains (the NTD and CTD, respectively). The major ampullate silk protein (MaSp) CTD has been shown to control protein solubility and fiber formation, but the aciniform CTD function remains unknown. Here, we compare fiber mechanical properties, solution-state structuring, and fibrous state secondary structural composition, and orientation relative to native aciniform silk for two AcSp1 repeat units with or without fused AcSp1- and MaSp-derived CTDs alongside three AcSp1 repeat units without a CTD. The native AcSp1 CTD uniquely modulated fiber mechanical properties, relative to all other constructs, directly correlating to a native-like structural transformation and alignment.
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Affiliation(s)
- Lingling Xu
- Institute of Biological Sciences and Biotechnology, Donghua University , Shanghai 201620, P.R. China
| | - Thierry Lefèvre
- Département de Chimie, Regroupement Québécois de Recherche sur la Fonction, la Structure et l'Ingénierie des Protéines (PROTEO), Centre de Recherche sur les Matériaux Avancés (CERMA) Université Laval , Québec, Québec G1V 0A6, Canada
| | | | - Qing Meng
- Institute of Biological Sciences and Biotechnology, Donghua University , Shanghai 201620, P.R. China
| | - Michèle Auger
- Département de Chimie, Regroupement Québécois de Recherche sur la Fonction, la Structure et l'Ingénierie des Protéines (PROTEO), Centre de Recherche sur les Matériaux Avancés (CERMA) Université Laval , Québec, Québec G1V 0A6, Canada
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Correa-Garhwal SM, Chaw RC, Clarke TH, Ayoub NA, Hayashi CY. Silk gene expression of theridiid spiders: implications for male-specific silk use. ZOOLOGY 2017; 122:107-114. [PMID: 28536006 DOI: 10.1016/j.zool.2017.04.003] [Citation(s) in RCA: 19] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/30/2016] [Revised: 04/21/2017] [Accepted: 04/21/2017] [Indexed: 01/15/2023]
Abstract
Spiders (order Araneae) rely on their silks for essential tasks, such as dispersal, prey capture, and reproduction. Spider silks are largely composed of spidroins, members of a protein family that are synthesized in silk glands. As needed, silk stored in silk glands is extruded through spigots on the spinnerets. Nearly all studies of spider silks have been conducted on females; thus, little is known about male silk biology. To shed light on silk use by males, we compared silk gene expression profiles of mature males to those of females from three cob-web weaving species (Theridiidae). We de novo assembled species-specific male transcriptomes from Latrodectus hesperus, Latrodectus geometricus, and Steatoda grossa followed by differential gene expression analyses. Consistent with their complement of silk spigots, male theridiid spiders express appreciable amounts of aciniform, major ampullate, minor ampullate, and pyriform spidroin genes but not tubuliform spidroin genes. The relative expression levels of particular spidroin genes varied between sexes and species. Because mature males desert their prey-capture webs and become cursorial in their search for mates, we anticipated that major ampullate (dragline) spidroin genes would be the silk genes most highly expressed by males. Indeed, major ampullate spidroin genes had the highest expression in S. grossa males. However, minor ampullate spidroin genes were the most highly expressed spidroin genes in L. geometricus and L. hesperus males. Our expression profiling results suggest species-specific adaptive divergence of silk use by male theridiids.
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Affiliation(s)
| | - R Crystal Chaw
- Department of Biology, University of California, Riverside, CA 92521, USA.
| | - Thomas H Clarke
- Department of Biology, University of California, Riverside, CA 92521, USA; Department of Biology, Washington and Lee University, Lexington, VA 24450, USA; J. Craig Venter Institute, Rockville, MD 20850, USA.
| | - Nadia A Ayoub
- Department of Biology, Washington and Lee University, Lexington, VA 24450, USA.
| | - Cheryl Y Hayashi
- Department of Biology, University of California, Riverside, CA 92521, USA; Division of Invertebrate Zoology, American Museum of Natural History, New York, NY 10024, USA.
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42
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Li X, Shi CH, Tang CL, Cai YM, Meng Q. The correlation between the length of repetitive domain and mechanical properties of the recombinant flagelliform spidroin. Biol Open 2017; 6:333-339. [PMID: 28126711 PMCID: PMC5374401 DOI: 10.1242/bio.022665] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/26/2023] Open
Abstract
Spider silk is an attractive biopolymer with numerous potential applications due to its remarkable characteristics. Among the six categories of spider silks, flagelliform (Flag) spider silk possesses longer and more repetitive core domains than others, therefore performing the highest extensibility. To investigate the correlation between the recombinant spidroin size and the synthetic fiber properties, four recombinant proteins with different sizes [N-Scn-C (n=1-4)] were constructed and expressed using IMPACT system. Subsequently, different recombinant spidroins were spun into fibers through wet-spinning via a custom-made continuous post-drawing device. Mechanical tests of the synthetic fibers with four parameters (maximum stress, maximum extension, Young's modulus and toughness) demonstrated that the extensibility of the fibers showed a positive correlation with spidroin size, consequently resulting in the extensibility of N-Sc4-C fiber ranked the highest (58.76%) among four fibers. Raman data revealed the relationship between secondary structure content and mechanical properties. The data here provide a deeper insight into the relationship between the function and structure of Flag silk for future design of artificial fibers. Summary: A study of the relationship between the structure and property of synthetic spider silk-like fibers, which aims to aid with the designing of functional artificial fibers.
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Affiliation(s)
- Xue Li
- College of Environmental Science and Engineering, Donghua University, Shanghai 201620, People's Republic of China.,Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai 201620, People's Republic of China
| | - Chang-Hua Shi
- College of Environmental Science and Engineering, Donghua University, Shanghai 201620, People's Republic of China
| | - Chuan-Long Tang
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai 201620, People's Republic of China
| | - Yu-Ming Cai
- Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai 201620, People's Republic of China
| | - Qing Meng
- College of Environmental Science and Engineering, Donghua University, Shanghai 201620, People's Republic of China .,Institute of Biological Sciences and Biotechnology, Donghua University, Shanghai 201620, People's Republic of China
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43
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Vienneau-Hathaway JM, Brassfield ER, Lane AK, Collin MA, Correa-Garhwal SM, Clarke TH, Schwager EE, Garb JE, Hayashi CY, Ayoub NA. Duplication and concerted evolution of MiSp-encoding genes underlie the material properties of minor ampullate silks of cobweb weaving spiders. BMC Evol Biol 2017; 17:78. [PMID: 28288560 PMCID: PMC5348893 DOI: 10.1186/s12862-017-0927-x] [Citation(s) in RCA: 28] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2016] [Accepted: 02/24/2017] [Indexed: 12/17/2022] Open
Abstract
BACKGROUND Orb-web weaving spiders and their relatives use multiple types of task-specific silks. The majority of spider silk studies have focused on the ultra-tough dragline silk synthesized in major ampullate glands, but other silk types have impressive material properties. For instance, minor ampullate silks of orb-web weaving spiders are as tough as draglines, due to their higher extensibility despite lower strength. Differences in material properties between silk types result from differences in their component proteins, particularly members of the spidroin (spider fibroin) gene family. However, the extent to which variation in material properties within a single silk type can be explained by variation in spidroin sequences is unknown. Here, we compare the minor ampullate spidroins (MiSp) of orb-weavers and cobweb weavers. Orb-web weavers use minor ampullate silk to form the auxiliary spiral of the orb-web while cobweb weavers use it to wrap prey, suggesting that selection pressures on minor ampullate spidroins (MiSp) may differ between the two groups. RESULTS We report complete or nearly complete MiSp sequences from five cobweb weaving spider species and measure material properties of minor ampullate silks in a subset of these species. We also compare MiSp sequences and silk properties of our cobweb weavers to published data for orb-web weavers. We demonstrate that all our cobweb weavers possess multiple MiSp loci and that one locus is more highly expressed in at least two species. We also find that the proportion of β-spiral-forming amino acid motifs in MiSp positively correlates with minor ampullate silk extensibility across orb-web and cobweb weavers. CONCLUSIONS MiSp sequences vary dramatically within and among spider species, and have likely been subject to multiple rounds of gene duplication and concerted evolution, which have contributed to the diverse material properties of minor ampullate silks. Our sequences also provide templates for recombinant silk proteins with tailored properties.
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Affiliation(s)
| | | | - Amanda Kelly Lane
- Department of Biology, Washington and Lee University, Lexington, VA USA
| | | | | | - Thomas H. Clarke
- Department of Biology, Washington and Lee University, Lexington, VA USA
- Department of Biology, University of California, Riverside, CA USA
| | - Evelyn E. Schwager
- Department of Biological Sciences, University of Massachusetts, Lowell, MA USA
| | - Jessica E. Garb
- Department of Biological Sciences, University of Massachusetts, Lowell, MA USA
| | | | - Nadia A. Ayoub
- Department of Biology, Washington and Lee University, Lexington, VA USA
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44
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Bauer J, Scheibel T. Conformational Stability and Interplay of Helical N- and C-Terminal Domains with Implications on Major Ampullate Spidroin Assembly. Biomacromolecules 2017; 18:835-845. [DOI: 10.1021/acs.biomac.6b01713] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
Affiliation(s)
- Joschka Bauer
- Lehrstuhl
Biomaterialien, ‡Forschungszentrum für Bio-Makromoleküle
(BIOmac), Bayrisches Geoinstitut, ∥Bayreuther Materialzentrum (BayMat), Fakultät
für Ingenieurswissenschaften, #Bayrisches Polymerinstitut (BPI), Universität
Bayreuth, Universität Bayreuth, Universitätsstr. 30, 95440 Bayreuth, Germany
- Bayreuther Zentrum für Kolloide
und Grenzflächen (BZKG), ⊥Bayreuther Zentrum
für Molekulare Biowissenschaften (BZMB), Universität Bayreuth, Naturwissenschaften I, 95440 Bayreuth, Germany
| | - Thomas Scheibel
- Lehrstuhl
Biomaterialien, ‡Forschungszentrum für Bio-Makromoleküle
(BIOmac), Bayrisches Geoinstitut, ∥Bayreuther Materialzentrum (BayMat), Fakultät
für Ingenieurswissenschaften, #Bayrisches Polymerinstitut (BPI), Universität
Bayreuth, Universität Bayreuth, Universitätsstr. 30, 95440 Bayreuth, Germany
- Bayreuther Zentrum für Kolloide
und Grenzflächen (BZKG), ⊥Bayreuther Zentrum
für Molekulare Biowissenschaften (BZMB), Universität Bayreuth, Naturwissenschaften I, 95440 Bayreuth, Germany
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45
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Lin S, Chen G, Liu X, Meng Q. Chimeric spider silk proteins mediated by intein result in artificial hybrid silks. Biopolymers 2017; 105:385-92. [PMID: 26948769 DOI: 10.1002/bip.22828] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/27/2016] [Revised: 02/26/2016] [Accepted: 03/01/2016] [Indexed: 11/10/2022]
Abstract
Hybrid silks hold a great potential as specific biomaterials due to its controlled mechanical properties. To produce fibers with tunable properties, here we firstly made chimeric proteins in vitro, called W2C4CT and W2C8CT, with ligation of MaSp repetitive modules (C) with AcSp modules (W) by intein trans splicing technology from smaller precursors without final yield reduction. Intein mediated chimeric proteins form fibers at a low concentration of 0.4 mg/mL in 50 mM K3 PO4 pH 7.5 just drawn by hand. Hybrid fibers show smoother surface, and also have stronger chemical resistance as compared with fibers from W2CT (W fibers) and mixture of W2CT/C8CT (MHF8 fibers). Fibers from chimeric protein W2C4CT (HFH4) have improved mechanical properties than W fibers; however, with more C modules W2C8CT fibers (HFH8) properties decreased, indicates the length proportion of various modules is very important and should be optimized for fibers with specific properties. Generally, hybrid silks generated via chimeric proteins, which can be simplified by intein trans splicing, has greater potential to produce fibers with tunable properties. Our research shows that intein mediated directional protein ligation is a novel way to make large chimeric spider silk proteins and hybrid silks. © 2016 Wiley Periodicals, Inc. Biopolymers 105: 385-392, 2016.
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Affiliation(s)
- Senzhu Lin
- Institute of Biological Sciences & Biotechnology, Donghua University, Shanghai, 201620, People's Republic of China.,Department of Biochemistry & Molecular Biology, Dalhousie University, Halifax, NS, Canada, B3H 4R2
| | - Gefei Chen
- Institute of Biological Sciences & Biotechnology, Donghua University, Shanghai, 201620, People's Republic of China
| | - Xiangqin Liu
- Department of Biochemistry & Molecular Biology, Dalhousie University, Halifax, NS, Canada, B3H 4R2
| | - Qing Meng
- Institute of Biological Sciences & Biotechnology, Donghua University, Shanghai, 201620, People's Republic of China
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46
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Chaw RC, Saski CA, Hayashi CY. Complete gene sequence of spider attachment silk protein (PySp1) reveals novel linker regions and extreme repeat homogenization. INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY 2017; 81:80-90. [PMID: 28057598 DOI: 10.1016/j.ibmb.2017.01.002] [Citation(s) in RCA: 46] [Impact Index Per Article: 5.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2016] [Revised: 12/27/2016] [Accepted: 01/01/2017] [Indexed: 06/06/2023]
Abstract
Spiders use a myriad of silk types for daily survival, and each silk type has a unique suite of task-specific mechanical properties. Of all spider silk types, pyriform silk is distinct because it is a combination of a dry protein fiber and wet glue. Pyriform silk fibers are coated with wet cement and extruded into "attachment discs" that adhere silks to each other and to substrates. The mechanical properties of spider silk types are linked to the primary and higher-level structures of spider silk proteins (spidroins). Spidroins are often enormous molecules (>250 kDa) and have a lengthy repetitive region that is flanked by relatively short (∼100 amino acids), non-repetitive amino- and carboxyl-terminal regions. The amino acid sequence motifs in the repetitive region vary greatly between spidroin type, while motif length and number underlie the remarkable mechanical properties of spider silk fibers. Existing knowledge of pyriform spidroins is fragmented, making it difficult to define links between the structure and function of pyriform spidroins. Here, we present the full-length sequence of the gene encoding pyriform spidroin 1 (PySp1) from the silver garden spider Argiope argentata. The predicted protein is similar to previously reported PySp1 sequences but the A. argentata PySp1 has a uniquely long and repetitive "linker", which bridges the amino-terminal and repetitive regions. Predictions of the hydrophobicity and secondary structure of A. argentata PySp1 identify regions important to protein self-assembly. Analysis of the full complement of A. argentata PySp1 repeats reveals extreme intragenic homogenization, and comparison of A. argentata PySp1 repeats with other PySp1 sequences identifies variability in two sub-repetitive expansion regions. Overall, the full-length A. argentata PySp1 sequence provides new evidence for understanding how pyriform spidroins contribute to the properties of pyriform silk fibers.
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Affiliation(s)
- Ro Crystal Chaw
- Department of Biology, University of California, Riverside, 900 University Ave., Riverside, 92521 CA, USA.
| | - Christopher A Saski
- Clemson University Genomics and Computational Biology Facility, Institute for Translational Genomics, Biosystems Research Complex #310, 105 Collings St., Clemson, 29634 SC, USA.
| | - Cheryl Y Hayashi
- Department of Biology, University of California, Riverside, 900 University Ave., Riverside, 92521 CA, USA; Division of Invertebrate Zoology, American Museum of Natural History, Central Park West at 79th Street, New York, NY 10024, USA.
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47
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Blamires SJ, Blackledge TA, Tso IM. Physicochemical Property Variation in Spider Silk: Ecology, Evolution, and Synthetic Production. ANNUAL REVIEW OF ENTOMOLOGY 2017; 62:443-460. [PMID: 27959639 DOI: 10.1146/annurev-ento-031616-035615] [Citation(s) in RCA: 68] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
The unique combination of great stiffness, strength, and extensibility makes spider major ampullate (MA) silk desirable for various biomimetic and synthetic applications. Intensive research on the genetics, biochemistry, and biomechanics of this material has facilitated a thorough understanding of its properties at various levels. Nevertheless, methods such as cloning, recombination, and electrospinning have not successfully produced materials with properties as impressive as those of spider silk. It is nevertheless becoming clear that silk properties are a consequence of whole-organism interactions with the environment in addition to genetic expression, gland biochemistry, and spinning processes. Here we assimilate the research done and assess the techniques used to determine distinct forms of spider silk chemical and physical property variability. We suggest that more research should focus on testing hypotheses that explain spider silk property variations in ecological and evolutionary contexts.
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Affiliation(s)
- Sean J Blamires
- Department of Life Science, Tunghai University, Taichung 40704, Taiwan;
- Evolution & Ecology Research Centre, School of Biological, Earth & Environmental Sciences, The University of New South Wales, Sydney 2052, Australia;
| | - Todd A Blackledge
- Department of Biology, Integrated Bioscience Program, The University of Akron, Akron, Ohio 44325;
| | - I-Min Tso
- Department of Life Science, Tunghai University, Taichung 40704, Taiwan;
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48
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Jones JA, Harris TI, Oliveira PF, Bell BE, Alhabib A, Lewis RV. Importance of Heat and Pressure for Solubilization of Recombinant Spider Silk Proteins in Aqueous Solution. Int J Mol Sci 2016; 17:ijms17111955. [PMID: 27886066 PMCID: PMC5133949 DOI: 10.3390/ijms17111955] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2016] [Revised: 11/11/2016] [Accepted: 11/18/2016] [Indexed: 01/23/2023] Open
Abstract
The production of recombinant spider silk proteins continues to be a key area of interest for a number of research groups. Several key obstacles exist in their production as well as in their formulation into useable products. The original reported method to solubilize recombinant spider silk proteins (rSSp) in an aqueous solution involved using microwaves to quickly generate heat and pressure inside of a sealed vial containing rSSp and water. Fibers produced from this system are remarkable in their mechanical ability and demonstrate the ability to be stretched and recover 100 times. The microwave method dissolves the rSSPs with dissolution time increasing with higher molecular weight constructs, increasing concentration of rSSPs, protein type, and salt concentration. It has proven successful in solvating a number of different rSSPs including native-like sequences (MaSp1, MaSp2, piriform, and aggregate) as well as chimeric sequences (FlAS) in varied concentrations that have been spun into fibers and formed into films, foams, sponges, gels, coatings, macro and micro spheres and adhesives. The system is effective but inherently unpredictable and difficult to control. Provided that the materials that can be generated from this method of dissolution are impressive, an alternative means of applying heat and pressure that is controllable and predictable has been developed. Results indicate that there are combinations of heat and pressure (135 °C and 140 psi) that result in maximal dissolution without degrading the recombinant MaSp2 protein tested, and that heat and pressure are the key elements to the method of dissolution.
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Affiliation(s)
- Justin A Jones
- Department of Biology, Utah State University, Logan, UT 84341, USA.
| | - Thomas I Harris
- Department of Biological Engineering, Utah State University, Logan, UT 84341, USA.
| | - Paula F Oliveira
- Department of Biology, Utah State University, Logan, UT 84341, USA.
| | - Brianne E Bell
- Department of Biology, Utah State University, Logan, UT 84341, USA.
| | | | - Randolph V Lewis
- Department of Biology, Utah State University, Logan, UT 84341, USA.
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49
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Bauer J, Schaal D, Eisoldt L, Schweimer K, Schwarzinger S, Scheibel T. Acidic Residues Control the Dimerization of the N-terminal Domain of Black Widow Spiders' Major Ampullate Spidroin 1. Sci Rep 2016; 6:34442. [PMID: 27681031 PMCID: PMC5041093 DOI: 10.1038/srep34442] [Citation(s) in RCA: 23] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/21/2016] [Accepted: 09/13/2016] [Indexed: 11/09/2022] Open
Abstract
Dragline silk is the most prominent amongst spider silks and comprises two types of major ampullate spidroins (MaSp) differing in their proline content. In the natural spinning process, the conversion of soluble MaSp into a tough fiber is, amongst other factors, triggered by dimerization and conformational switching of their helical amino-terminal domains (NRN). Both processes are induced by protonation of acidic residues upon acidification along the spinning duct. Here, the structure and monomer-dimer-equilibrium of the domain NRN1 of Latrodectus hesperus MaSp1 and variants thereof have been investigated, and the key residues for both could be identified. Changes in ionic composition and strength within the spinning duct enable electrostatic interactions between the acidic and basic pole of two monomers which prearrange into an antiparallel dimer. Upon naturally occurring acidification this dimer is stabilized by protonation of residue E114. A conformational change is independently triggered by protonation of clustered acidic residues (D39, E76, E81). Such step-by-step mechanism allows a controlled spidroin assembly in a pH- and salt sensitive manner, preventing premature aggregation of spider silk proteins in the gland and at the same time ensuring fast and efficient dimer formation and stabilization on demand in the spinning duct.
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Affiliation(s)
- Joschka Bauer
- Lehrstuhl Biomaterialien, Universität Bayreuth, Fakultät für Ingenieurswissenschaften, Bayreuth, Germany
| | - Daniel Schaal
- Lehrstuhl Biopolymere, Universität Bayreuth, Bayrisches Geoinstitut, Bayreuth, Germany.,Forschungszentrum für Bio-Makromoleküle (BIOmac), Universität Bayreuth, Bayreuth, Germany
| | - Lukas Eisoldt
- Lehrstuhl Biomaterialien, Universität Bayreuth, Fakultät für Ingenieurswissenschaften, Bayreuth, Germany
| | - Kristian Schweimer
- Lehrstuhl Biopolymere, Universität Bayreuth, Bayrisches Geoinstitut, Bayreuth, Germany.,Forschungszentrum für Bio-Makromoleküle (BIOmac), Universität Bayreuth, Bayreuth, Germany
| | - Stephan Schwarzinger
- Lehrstuhl Biopolymere, Universität Bayreuth, Bayrisches Geoinstitut, Bayreuth, Germany.,Forschungszentrum für Bio-Makromoleküle (BIOmac), Universität Bayreuth, Bayreuth, Germany
| | - Thomas Scheibel
- Lehrstuhl Biomaterialien, Universität Bayreuth, Fakultät für Ingenieurswissenschaften, Bayreuth, Germany.,Forschungszentrum für Bio-Makromoleküle (BIOmac), Universität Bayreuth, Bayreuth, Germany.,Bayreuther Zentrum für Kolloide und Grenzflächen (BZKG), Universität Bayreuth, Bayreuth, Germany.,Bayreuther Materialzentrum (BayMat), Universität Bayreuth, Bayreuth, Germany.,Bayreuther Zentrum für Molekulare Biowissenschaften (BZMB), Universität Bayreuth, Bayreuth, Germany
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50
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Silk Spinning in Silkworms and Spiders. Int J Mol Sci 2016; 17:ijms17081290. [PMID: 27517908 PMCID: PMC5000687 DOI: 10.3390/ijms17081290] [Citation(s) in RCA: 85] [Impact Index Per Article: 9.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2016] [Revised: 07/31/2016] [Accepted: 08/02/2016] [Indexed: 01/08/2023] Open
Abstract
Spiders and silkworms spin silks that outcompete the toughness of all natural and manmade fibers. Herein, we compare and contrast the spinning of silk in silkworms and spiders, with the aim of identifying features that are important for fiber formation. Although spiders and silkworms are very distantly related, some features of spinning silk seem to be universal. Both spiders and silkworms produce large silk proteins that are highly repetitive and extremely soluble at high pH, likely due to the globular terminal domains that flank an intermediate repetitive region. The silk proteins are produced and stored at a very high concentration in glands, and then transported along a narrowing tube in which they change conformation in response primarily to a pH gradient generated by carbonic anhydrase and proton pumps, as well as to ions and shear forces. The silk proteins thereby convert from random coil and alpha helical soluble conformations to beta sheet fibers. We suggest that factors that need to be optimized for successful production of artificial silk proteins capable of forming tough fibers include protein solubility, pH sensitivity, and preservation of natively folded proteins throughout the purification and initial spinning processes.
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