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Liew YJ, Dimwamwa ED, Wright NC, Zhang Y, Stanley GB. MULTIPLE DISTINCT TIMESCALES OF RAPID SENSORY ADAPATION IN THE THALAMOCORTICAL CIRCUIT. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.06.06.597761. [PMID: 38895470 PMCID: PMC11185625 DOI: 10.1101/2024.06.06.597761] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/21/2024]
Abstract
Numerous studies have shown that neuronal representations in sensory pathways are far from static but are instead strongly shaped by the complex properties of the sensory inputs they receive. Adaptation dynamically shapes the neural signaling that underlies our perception of the world yet remains poorly understood. We investigated rapid adaptation across timescales from hundreds of milliseconds to seconds through simultaneous multi-electrode recordings from the ventro-posteromedial nucleus of the thalamus (VPm) and layer 4 of the primary somatosensory cortex (S1) in male and female anesthetized mice in response to controlled, persistent whisker stimulation. Observations in VPm and S1 reveal a degree of adaptation that progresses through the pathway. Signatures of two distinct timescales of rapid adaptation in the firing rates of both thalamic and cortical neuronal populations were revealed, also reflected in the synchrony of the thalamic population and in the thalamocortical synaptic efficacy that was measured in putatively monosynaptically connected thalamocortical pairs. Controlled optogenetic activation of VPm further demonstrated that the longer timescale adaptation observed in S1 is likely inherited from slow decreases in thalamic firing rate and synchrony. Despite the degraded sensory responses, adaptation resulted in a shift in coding strategy that favors theoretical discrimination over detection across the observed timescales of adaptation. Overall, although multiple mechanisms contribute to rapid adaptation at distinct timescales, they support a unifying framework on the role of adaptation in sensory processing.
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Affiliation(s)
- Yi Juin Liew
- Wallace H Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA 30332, USA
- Joint PhD Program in Biomedical Engineering, Georgia Institute of Technology – Emory University – Peking University, Atlanta, GA 30332, USA
| | - Elaida D Dimwamwa
- Wallace H Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA 30332, USA
| | - Nathaniel C Wright
- Wallace H Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA 30332, USA
| | - Yong Zhang
- Neuroscience Research Institute and Department of Neurobiology, School of Basic Medical Sciences, Peking University, Key Laboratory for Neuroscience, Ministry of Education of China and National Health Commission of the People’s Republic of China, Beijing 100083, China
- PKU-IDG/McGovern Institute for Brain Research, Beijing, 100871, China
| | - Garrett B Stanley
- Wallace H Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA 30332, USA
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Carriot J, McAllister G, Hooshangnejad H, Mackrous I, Cullen KE, Chacron MJ. Sensory adaptation mediates efficient and unambiguous encoding of natural stimuli by vestibular thalamocortical pathways. Nat Commun 2022; 13:2612. [PMID: 35551186 PMCID: PMC9098492 DOI: 10.1038/s41467-022-30348-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2021] [Accepted: 04/26/2022] [Indexed: 11/09/2022] Open
Abstract
Sensory systems must continuously adapt to optimally encode stimuli encountered within the natural environment. The prevailing view is that such optimal coding comes at the cost of increased ambiguity, yet to date, prior studies have focused on artificial stimuli. Accordingly, here we investigated whether such a trade-off between optimality and ambiguity exists in the encoding of natural stimuli in the vestibular system. We recorded vestibular nuclei and their target vestibular thalamocortical neurons during naturalistic and artificial self-motion stimulation. Surprisingly, we found no trade-off between optimality and ambiguity. Using computational methods, we demonstrate that thalamocortical neural adaptation in the form of contrast gain control actually reduces coding ambiguity without compromising the optimality of coding under naturalistic but not artificial stimulation. Thus, taken together, our results challenge the common wisdom that adaptation leads to ambiguity and instead suggest an essential role in underlying unambiguous optimized encoding of natural stimuli.
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Affiliation(s)
- Jerome Carriot
- Department of Physiology, McGill University, Montréal, Canada
| | | | - Hamed Hooshangnejad
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, USA
| | | | - Kathleen E Cullen
- Department of Biomedical Engineering, Johns Hopkins University, Baltimore, USA.,Department of Otolaryngology-Head and Neck Surgery, Johns Hopkins University School of Medicine, Baltimore, USA.,Department of Neuroscience, Johns Hopkins University School of Medicine, Baltimore, USA.,Kavli Neuroscience Discovery Institute, Johns Hopkins University, Baltimore, USA
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Adibi M, Lampl I. Sensory Adaptation in the Whisker-Mediated Tactile System: Physiology, Theory, and Function. Front Neurosci 2021; 15:770011. [PMID: 34776857 PMCID: PMC8586522 DOI: 10.3389/fnins.2021.770011] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/03/2021] [Accepted: 09/30/2021] [Indexed: 12/03/2022] Open
Abstract
In the natural environment, organisms are constantly exposed to a continuous stream of sensory input. The dynamics of sensory input changes with organism's behaviour and environmental context. The contextual variations may induce >100-fold change in the parameters of the stimulation that an animal experiences. Thus, it is vital for the organism to adapt to the new diet of stimulation. The response properties of neurons, in turn, dynamically adjust to the prevailing properties of sensory stimulation, a process known as "neuronal adaptation." Neuronal adaptation is a ubiquitous phenomenon across all sensory modalities and occurs at different stages of processing from periphery to cortex. In spite of the wealth of research on contextual modulation and neuronal adaptation in visual and auditory systems, the neuronal and computational basis of sensory adaptation in somatosensory system is less understood. Here, we summarise the recent finding and views about the neuronal adaptation in the rodent whisker-mediated tactile system and further summarise the functional effect of neuronal adaptation on the response dynamics and encoding efficiency of neurons at single cell and population levels along the whisker-mediated touch system in rodents. Based on direct and indirect pieces of evidence presented here, we suggest sensory adaptation provides context-dependent functional mechanisms for noise reduction in sensory processing, salience processing and deviant stimulus detection, shift between integration and coincidence detection, band-pass frequency filtering, adjusting neuronal receptive fields, enhancing neural coding and improving discriminability around adapting stimuli, energy conservation, and disambiguating encoding of principal features of tactile stimuli.
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Affiliation(s)
- Mehdi Adibi
- Department of Physiology and Biomedicine Discovery Institute, Monash University, Clayton, VIC, Australia
- Department of Neuroscience and Padova Neuroscience Center (PNC), University of Padova, Padova, Italy
| | - Ilan Lampl
- Department of Brain Sciences, Weizmann Institute of Science, Rehovot, Israel
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4
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Abstract
Identical physical inputs do not always evoke identical percepts. To investigate the role of stimulus history in tactile perception, we designed a task in which rats had to judge each vibrissal vibration, in a long series, as strong or weak depending on its mean speed. After a low-speed stimulus (trial n - 1), rats were more likely to report the next stimulus (trial n) as strong, and after a high-speed stimulus, they were more likely to report the next stimulus as weak, a repulsive effect that did not depend on choice or reward on trial n - 1. This effect could be tracked over several preceding trials (i.e., n - 2 and earlier) and was characterized by an exponential decay function, reflecting a trial-by-trial incorporation of sensory history. Surprisingly, the influence of trial n - 1 strengthened as the time interval between n - 1 and n grew. Human subjects receiving fingertip vibrations showed these same key findings. We are able to account for the repulsive stimulus history effect, and its detailed time scale, through a single-parameter model, wherein each new stimulus gradually updates the subject's decision criterion. This model points to mechanisms underlying how the past affects the ongoing subjective experience.
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Wright NC, Borden PY, Liew YJ, Bolus MF, Stoy WM, Forest CR, Stanley GB. Rapid Cortical Adaptation and the Role of Thalamic Synchrony during Wakefulness. J Neurosci 2021; 41:5421-5439. [PMID: 33986072 PMCID: PMC8221593 DOI: 10.1523/jneurosci.3018-20.2021] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Revised: 03/18/2021] [Accepted: 04/29/2021] [Indexed: 12/14/2022] Open
Abstract
Rapid sensory adaptation is observed across all sensory systems, and strongly shapes sensory percepts in complex sensory environments. Yet despite its ubiquity and likely necessity for survival, the mechanistic basis is poorly understood. A wide range of primarily in vitro and anesthetized studies have demonstrated the emergence of adaptation at the level of primary sensory cortex, with only modest signatures in earlier stages of processing. The nature of rapid adaptation and how it shapes sensory representations during wakefulness, and thus the potential role in perceptual adaptation, is underexplored, as are the mechanisms that underlie this phenomenon. To address these knowledge gaps, we recorded spiking activity in primary somatosensory cortex (S1) and the upstream ventral posteromedial (VPm) thalamic nucleus in the vibrissa pathway of awake male and female mice, and quantified responses to whisker stimuli delivered in isolation and embedded in an adapting sensory background. We found that cortical sensory responses were indeed adapted by persistent sensory stimulation; putative excitatory neurons were profoundly adapted, and inhibitory neurons only modestly so. Further optogenetic manipulation experiments and network modeling suggest this largely reflects adaptive changes in synchronous thalamic firing combined with robust engagement of feedforward inhibition, with little contribution from synaptic depression. Taken together, these results suggest that cortical adaptation in the regime explored here results from changes in the timing of thalamic input, and the way in which this differentially impacts cortical excitation and feedforward inhibition, pointing to a prominent role of thalamic gating in rapid adaptation of primary sensory cortex.SIGNIFICANCE STATEMENT Rapid adaptation of sensory activity strongly shapes representations of sensory inputs across all sensory pathways over the timescale of seconds, and has profound effects on sensory perception. Despite its ubiquity and theoretical role in the efficient encoding of complex sensory environments, the mechanistic basis is poorly understood, particularly during wakefulness. In this study in the vibrissa pathway of awake mice, we show that cortical representations of sensory inputs are strongly shaped by rapid adaptation, and that this is mediated primarily by adaptive gating of the thalamic inputs to primary sensory cortex and the differential way in which these inputs engage cortical subpopulations of neurons.
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Affiliation(s)
- Nathaniel C Wright
- Wallace H Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, Georgia 30332
| | - Peter Y Borden
- Wallace H Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, Georgia 30332
| | - Yi Juin Liew
- Department of Biomedical Engineering, Georgia Institute of Technology, Emory University, Atlanta, Georgia 30332 and Beijing University, Beijing China 100871
| | - Michael F Bolus
- Wallace H Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, Georgia 30332
| | - William M Stoy
- Department of Mechanical Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332
| | - Craig R Forest
- Department of Mechanical Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332
| | - Garrett B Stanley
- Wallace H Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, Georgia 30332
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Katz Y, Lampl I. Cross-Whisker Adaptation of Neurons in Layer 2/3 of the Rat Barrel Cortex. Front Syst Neurosci 2021; 15:646563. [PMID: 33994963 PMCID: PMC8113387 DOI: 10.3389/fnsys.2021.646563] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/27/2020] [Accepted: 04/06/2021] [Indexed: 11/13/2022] Open
Abstract
Neurons in the barrel cortex respond preferentially to stimulation of one principal whisker and weakly to several adjacent whiskers. Such integration exists already in layer 4, the pivotal recipient layer of thalamic inputs. Previous studies show that cortical neurons gradually adapt to repeated whisker stimulations and that layer 4 neurons exhibit whisker specific adaptation and no apparent interactions with other whiskers. This study aimed to study the specificity of adaptation of layer 2/3 cortical cells. Towards this aim, we compared the synaptic response of neurons to either repetitive stimulation of one of two responsive whiskers or when repetitive stimulation of the two whiskers was interleaved. We found that in most layer 2/3 cells adaptation is whisker-specific. These findings indicate that despite the multi-whisker receptive fields in the cortex, the adaptation process for each whisker-pathway is mostly independent of other whiskers. A mechanism allowing high responsiveness in complex environments.
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Affiliation(s)
- Yonatan Katz
- Department of Neurobiology, The Weizmann Institute of Science, Rehovot, Israel
| | - Ilan Lampl
- Department of Neurobiology, The Weizmann Institute of Science, Rehovot, Israel
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Whitmire CJ, Liew YJ, Stanley GB. Thalamic state influences timing precision in the thalamocortical circuit. J Neurophysiol 2021; 125:1833-1850. [PMID: 33760642 DOI: 10.1152/jn.00261.2020] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Sensory signals from the outside world are transduced at the periphery, passing through thalamus before reaching cortex, ultimately giving rise to the sensory representations that enable us to perceive the world. The thalamocortical circuit is particularly sensitive to the temporal precision of thalamic spiking due to highly convergent synaptic connectivity. Thalamic neurons can exhibit burst and tonic modes of firing that strongly influence timing within the thalamus. The impact of these changes in thalamic state on sensory encoding in the cortex, however, remains unclear. Here, we investigated the role of thalamic state on timing in the thalamocortical circuit of the vibrissa pathway in the anesthetized rat. We optogenetically hyperpolarized thalamus while recording single unit activity in both thalamus and cortex. Tonic spike-triggered analysis revealed temporally precise thalamic spiking that was locked to weak white-noise sensory stimuli, whereas thalamic burst spiking was associated with a loss in stimulus-locked temporal precision. These thalamic state-dependent changes propagated to cortex such that the cortical timing precision was diminished during the hyperpolarized (burst biased) thalamic state. Although still sensory driven, the cortical neurons became significantly less precisely locked to the weak white-noise stimulus. The results here suggests a state-dependent differential regulation of spike timing precision in the thalamus that could gate what signals are ultimately propagated to cortex.NEW & NOTEWORTHY The majority of sensory signals are transmitted through the thalamus. There is growing evidence of complex thalamic gating through coordinated firing modes that have a strong impact on cortical sensory representations. Optogenetic hyperpolarization of thalamus pushed it into burst firing that disrupted precise time-locked sensory signaling, with a direct impact on the downstream cortical encoding, setting the stage for a timing-based thalamic gate of sensory signaling.
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Affiliation(s)
- Clarissa J Whitmire
- Wallace H Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, Georgia
| | - Yi Juin Liew
- Wallace H Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, Georgia.,Joint PhD Program in Biomedical Engineering, Georgia Institute of Technology-Emory University-Peking University, Atlanta, Georgia
| | - Garrett B Stanley
- Wallace H Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, Georgia
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Tabas A, Mihai G, Kiebel S, Trampel R, von Kriegstein K. Abstract rules drive adaptation in the subcortical sensory pathway. eLife 2020; 9:64501. [PMID: 33289479 PMCID: PMC7785290 DOI: 10.7554/elife.64501] [Citation(s) in RCA: 11] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/30/2020] [Accepted: 12/03/2020] [Indexed: 01/19/2023] Open
Abstract
The subcortical sensory pathways are the fundamental channels for mapping the outside world to our minds. Sensory pathways efficiently transmit information by adapting neural responses to the local statistics of the sensory input. The long-standing mechanistic explanation for this adaptive behaviour is that neural activity decreases with increasing regularities in the local statistics of the stimuli. An alternative account is that neural coding is directly driven by expectations of the sensory input. Here, we used abstract rules to manipulate expectations independently of local stimulus statistics. The ultra-high-field functional-MRI data show that abstract expectations can drive the response amplitude to tones in the human auditory pathway. These results provide first unambiguous evidence of abstract processing in a subcortical sensory pathway. They indicate that the neural representation of the outside world is altered by our prior beliefs even at initial points of the processing hierarchy.
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Affiliation(s)
- Alejandro Tabas
- Faculty of Psychology, Technische Universität Dresden, Dresden, Germany.,Max Planck Research Group Neural Mechanism of Human Communication, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Glad Mihai
- Faculty of Psychology, Technische Universität Dresden, Dresden, Germany.,Max Planck Research Group Neural Mechanism of Human Communication, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Stefan Kiebel
- Faculty of Psychology, Technische Universität Dresden, Dresden, Germany.,Centre for Tactile Internet with Human-in-the-Loop (CeTI), Technische Universität Dresden, Dresden, Germany
| | - Robert Trampel
- Department of Neurophysics, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
| | - Katharina von Kriegstein
- Faculty of Psychology, Technische Universität Dresden, Dresden, Germany.,Max Planck Research Group Neural Mechanism of Human Communication, Max Planck Institute for Human Cognitive and Brain Sciences, Leipzig, Germany
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Bolus MF, Willats AA, Whitmire CJ, Rozell CJ, Stanley GB. Design strategies for dynamic closed-loop optogenetic neurocontrol in vivo. J Neural Eng 2019; 15:026011. [PMID: 29300002 DOI: 10.1088/1741-2552/aaa506] [Citation(s) in RCA: 27] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
Abstract
OBJECTIVE Controlling neural activity enables the possibility of manipulating sensory perception, cognitive processes, and body movement, in addition to providing a powerful framework for functionally disentangling the neural circuits that underlie these complex phenomena. Over the last decade, optogenetic stimulation has become an increasingly important and powerful tool for understanding neural circuit function, owing to the ability to target specific cell types and bidirectionally modulate neural activity. To date, most stimulation has been provided in open-loop or in an on/off closed-loop fashion, where previously-determined stimulation is triggered by an event. Here, we describe and demonstrate a design approach for precise optogenetic control of neuronal firing rate modulation using feedback to guide stimulation continuously. APPROACH Using the rodent somatosensory thalamus as an experimental testbed for realizing desired time-varying patterns of firing rate modulation, we utilized a moving average exponential filter to estimate firing rate online from single-unit spiking measured extracellularly. This estimate of instantaneous rate served as feedback for a proportional integral (PI) controller, which was designed during the experiment based on a linear-nonlinear Poisson (LNP) model of the neuronal response to light. MAIN RESULTS The LNP model fit during the experiment enabled robust closed-loop control, resulting in good tracking of sinusoidal and non-sinusoidal targets, and rejection of unmeasured disturbances. Closed-loop control also enabled manipulation of trial-to-trial variability. SIGNIFICANCE Because neuroscientists are faced with the challenge of dissecting the functions of circuit components, the ability to maintain control of a region of interest in spite of changes in ongoing neural activity will be important for disambiguating function within networks. Closed-loop stimulation strategies are ideal for control that is robust to such changes, and the employment of continuous feedback to adjust stimulation in real-time can improve the quality of data collected using optogenetic manipulation.
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Affiliation(s)
- M F Bolus
- Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA 30332, United States of America
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Response Adaptation in Barrel Cortical Neurons Facilitates Stimulus Detection during Rhythmic Whisker Stimulation in Anesthetized Mice. eNeuro 2019; 6:eN-NWR-0471-18. [PMID: 30957014 PMCID: PMC6449164 DOI: 10.1523/eneuro.0471-18.2019] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/04/2018] [Revised: 02/28/2019] [Accepted: 03/08/2019] [Indexed: 11/21/2022] Open
Abstract
Rodents use rhythmic whisker movements at frequencies between 4 and 12 Hz to sense the environment that will be disturbed when the animal touches an object. The aim of this work is to study the response adaptation to rhythmic whisker stimulation trains at 4 Hz in the barrel cortex and the sensitivity of cortical neurons to changes in the timing of the stimulation pattern. Longitudinal arrays of four iridium oxide electrodes were used to obtain single-unit recordings in supragranular, granular, and infragranular neurons in urethane anesthetized mice. The stimulation protocol consisted in a stimulation train of three air puffs (20 ms duration each) in which the time interval between the first and the third stimuli was fixed (500 ms) and the time interval between the first and the second stimuli changed (regular: 250 ms; “accelerando”: 375 ms; or “decelerando” stimulation train: 125 ms interval). Cortical neurons adapted strongly their response to regular stimulation trains. Response adaptation was reduced when accelerando or decelerando stimulation trains were applied. This facilitation of the shifted stimulus was mediated by activation of NMDA receptors because the effect was blocked by AP5. The facilitation was not observed in thalamic nuclei. Facilitation increased during periods of EEG activation induced by systemic application of IGF-I, probably by activation of NMDA receptors, as well. We suggest that response adaptation is the outcome of an intrinsic cortical information processing aimed at contributing to improve the detection of “unexpected” stimuli that disturbed the rhythmic behavior of exploration.
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Prediction of Choice from Competing Mechanosensory and Choice-Memory Cues during Active Tactile Decision Making. J Neurosci 2019; 39:3921-3933. [PMID: 30850514 PMCID: PMC6520515 DOI: 10.1523/jneurosci.2217-18.2019] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/25/2018] [Revised: 01/11/2019] [Accepted: 01/16/2019] [Indexed: 01/15/2023] Open
Abstract
Perceptual decision making is an active process where animals move their sense organs to extract task-relevant information. To investigate how the brain translates sensory input into decisions during active sensation, we developed a mouse active touch task where the mechanosensory input can be precisely measured and that challenges animals to use multiple mechanosensory cues. Male mice were trained to localize a pole using a single whisker and to report their decision by selecting one of three choices. Using high-speed imaging and machine vision, we estimated whisker-object mechanical forces at millisecond resolution. Mice solved the task by a sensory-motor strategy where both the strength and direction of whisker bending were informative cues to pole location. We found competing influences of immediate sensory input and choice memory on mouse choice. On correct trials, choice could be predicted from the direction and strength of whisker bending, but not from previous choice. In contrast, on error trials, choice could be predicted from previous choice but not from whisker bending. This study shows that animal choices during active tactile decision making can be predicted from mechanosensory and choice-memory signals, and provides a new task well suited for the future study of the neural basis of active perceptual decisions.SIGNIFICANCE STATEMENT Due to the difficulty of measuring the sensory input to moving sense organs, active perceptual decision making remains poorly understood. The whisker system provides a way forward since it is now possible to measure the mechanical forces due to whisker-object contact during behavior. Here we train mice in a novel behavioral task that challenges them to use rich mechanosensory cues but can be performed using one whisker and enables task-relevant mechanical forces to be precisely estimated. This approach enables rigorous study of how sensory cues translate into action during active, perceptual decision making. Our findings provide new insight into active touch and how sensory/internal signals interact to determine behavioral choices.
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12
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Martini FJ, Molano-Mazón M, Maravall M. Interspersed Distribution of Selectivity to Kinematic Stimulus Features in Supragranular Layers of Mouse Barrel Cortex. Cereb Cortex 2018; 27:3782-3789. [PMID: 28334121 DOI: 10.1093/cercor/bhx019] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2016] [Accepted: 12/14/2016] [Indexed: 01/17/2023] Open
Abstract
Neurons in the primary sensory regions of neocortex have heterogeneous response properties. The spatial arrangement of neurons with particular response properties is a key aspect of population representations and can shed light on how local circuits are wired. Here, we investigated how neurons with sensitivity to different kinematic features of whisker stimuli are distributed across local circuits in supragranular layers of the barrel cortex. Using 2-photon calcium population imaging in anesthetized mice, we found that nearby neurons represent diverse kinematic features, providing a rich population representation at the local scale. Neurons interspersed in space therefore responded differently to a common stimulus kinematic feature. Conversely, neurons with similar feature selectivity were located no closer to each other than predicted by a random distribution null hypothesis. This finding relied on defining a null hypothesis that was specific for testing the spatial distribution of tuning across neurons. We also measured how neurons sensitive to specific features were distributed relative to barrel boundaries, and found no systematic organization. Our results are compatible with randomly distributed selectivity to kinematic features, with no systematic ordering superimposed upon the whisker map.
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Affiliation(s)
- Francisco J Martini
- Instituto de Neurociencias de Alicante UMH-CSIC, Avda. Ramón y Cajal s/n, Campus de San Juan, 03550 Sant Joan d'Alacant, Spain
| | - Manuel Molano-Mazón
- Instituto de Neurociencias de Alicante UMH-CSIC, Avda. Ramón y Cajal s/n, Campus de San Juan, 03550 Sant Joan d'Alacant, Spain.,Laboratory of Neural Computation, Center for Neuroscience and Cognitive Systems @UniTn, Istituto Italiano di Tecnologia, 38068 Rovereto, Italy
| | - Miguel Maravall
- Instituto de Neurociencias de Alicante UMH-CSIC, Avda. Ramón y Cajal s/n, Campus de San Juan, 03550 Sant Joan d'Alacant, Spain.,Sussex Neuroscience, School of Life Sciences, University of Sussex, Brighton, UK
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13
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Bale MR, Maravall M. Organization of sensory feature selectivity in the whisker system. Neuroscience 2017; 368:70-80. [PMID: 28918260 PMCID: PMC5798594 DOI: 10.1016/j.neuroscience.2017.09.014] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/24/2017] [Revised: 08/25/2017] [Accepted: 09/05/2017] [Indexed: 12/14/2022]
Abstract
Neurons in the whisker system are selective to spatial and dynamical properties – features – of sensory stimuli. At each stage of the pathway, different neurons encode distinct features, generating a rich population representation. Whisker touch is robustly represented; neurons respond to touch-driven fast fluctuations in forces at the whisker base. Cortical neurons have more complex and context-dependent selectivity than subcortical, e.g., to collective whisker motion. Understanding how these signals are integrated to construct whisker-mediated percepts requires further research.
Our sensory receptors are faced with an onslaught of different environmental inputs. Each sensory event or encounter with an object involves a distinct combination of physical energy sources impinging upon receptors. In the rodent whisker system, each primary afferent neuron located in the trigeminal ganglion innervates and responds to a single whisker and encodes a distinct set of physical stimulus properties – features – corresponding to changes in whisker angle and shape and the consequent forces acting on the whisker follicle. Here we review the nature of the features encoded by successive stages of processing along the whisker pathway. At each stage different neurons respond to distinct features, such that the population as a whole represents diverse properties. Different neuronal types also have distinct feature selectivity. Thus, neurons at the same stage of processing and responding to the same whisker nevertheless play different roles in representing objects contacted by the whisker. This diversity, combined with the precise timing and high reliability of responses, enables populations at each stage to represent a wide range of stimuli. Cortical neurons respond to more complex stimulus properties – such as correlated motion across whiskers – than those at early subcortical stages. Temporal integration along the pathway is comparatively weak: neurons up to barrel cortex (BC) are sensitive mainly to fast (tens of milliseconds) fluctuations in whisker motion. The topographic organization of whisker sensitivity is paralleled by systematic organization of neuronal selectivity to certain other physical features, but selectivity to touch and to dynamic stimulus properties is distributed in “salt-and-pepper” fashion.
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Affiliation(s)
- Michael R Bale
- Sussex Neuroscience, School of Life Sciences, University of Sussex, Brighton BN1 9QG, United Kingdom
| | - Miguel Maravall
- Sussex Neuroscience, School of Life Sciences, University of Sussex, Brighton BN1 9QG, United Kingdom.
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14
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Kheradpezhouh E, Adibi M, Arabzadeh E. Response dynamics of rat barrel cortex neurons to repeated sensory stimulation. Sci Rep 2017; 7:11445. [PMID: 28904406 PMCID: PMC5597595 DOI: 10.1038/s41598-017-11477-6] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2017] [Accepted: 08/24/2017] [Indexed: 11/25/2022] Open
Abstract
Neuronal adaptation is a common feature observed at various stages of sensory processing. Here, we quantified the time course of adaptation in rat somatosensory cortex. Under urethane anesthesia, we juxta-cellularly recorded single neurons (n = 147) while applying a series of whisker deflections at various frequencies (2-32 Hz). For ~90% of neurons, the response per unit of time decreased with frequency. The degree of adaptation increased along the train of deflections and was strongest at the highest frequency. However, a subset of neurons showed facilitation producing higher responses to subsequent deflections. The response latency to consecutive deflections increased both for neurons that exhibited adaptation and for those that exhibited response facilitation. Histological reconstruction of neurons (n = 45) did not reveal a systematic relationship between adaptation profiles and cell types. In addition to the periodic stimuli, we applied a temporally irregular train of deflections with a mean frequency of 8 Hz. For 70% of neurons, the response to the irregular stimulus was greater than that of the 8 Hz regular. This increased response to irregular stimulation was positively correlated with the degree of adaptation. Altogether, our findings demonstrate high levels of diversity among cortical neurons, with a proportion of neurons showing facilitation at specific temporal intervals.
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Affiliation(s)
- Ehsan Kheradpezhouh
- Eccles Institute of Neuroscience, John Curtin School of Medical Research, Australian National University, Canberra, ACT, Australia.
- Australian Research Council Centre of Excellence for Integrative Brain Function, Australian National University Node, Canberra, ACT, Australia.
| | - Mehdi Adibi
- University of New South Wales, UNSW, Sydney, NSW, Australia
- International School for Advanced Studies - SISSA, Trieste, Italy
| | - Ehsan Arabzadeh
- Eccles Institute of Neuroscience, John Curtin School of Medical Research, Australian National University, Canberra, ACT, Australia
- Australian Research Council Centre of Excellence for Integrative Brain Function, Australian National University Node, Canberra, ACT, Australia
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15
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Abstract
A fundamental question in the investigation of any sensory system is what physical signals drive its sensory neurons during natural behavior. Surprisingly, in the whisker system, it is only recently that answers to this question have emerged. Here, we review the key developments, focussing mainly on the first stage of the ascending pathway - the primary whisker afferents (PWAs). We first consider a biomechanical framework, which describes the fundamental mechanical forces acting on the whiskers during active sensation. We then discuss technical progress that has allowed such mechanical variables to be estimated in awake, behaving animals. We discuss past electrophysiological evidence concerning how PWAs function and reinterpret it within the biomechanical framework. Finally, we consider recent studies of PWAs in awake, behaving animals and compare the results to related studies of the cortex. We argue that understanding 'what the whiskers tell the brain' sheds valuable light on the computational functions of downstream neural circuits, in particular, the barrel cortex.
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16
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Mease RA, Kuner T, Fairhall AL, Groh A. Multiplexed Spike Coding and Adaptation in the Thalamus. Cell Rep 2017; 19:1130-1140. [PMID: 28494863 PMCID: PMC5554799 DOI: 10.1016/j.celrep.2017.04.050] [Citation(s) in RCA: 36] [Impact Index Per Article: 5.1] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/23/2016] [Revised: 03/18/2017] [Accepted: 04/18/2017] [Indexed: 11/26/2022] Open
Abstract
High-frequency "burst" clusters of spikes are a generic output pattern of many neurons. While bursting is a ubiquitous computational feature of different nervous systems across animal species, the encoding of synaptic inputs by bursts is not well understood. We find that bursting neurons in the rodent thalamus employ "multiplexing" to differentially encode low- and high-frequency stimulus features associated with either T-type calcium "low-threshold" or fast sodium spiking events, respectively, and these events adapt differently. Thus, thalamic bursts encode disparate information in three channels: (1) burst size, (2) burst onset time, and (3) precise spike timing within bursts. Strikingly, this latter "intraburst" encoding channel shows millisecond-level feature selectivity and adapts across statistical contexts to maintain stable information encoded per spike. Consequently, calcium events both encode low-frequency stimuli and, in parallel, gate a transient window for high-frequency, adaptive stimulus encoding by sodium spike timing, allowing bursts to efficiently convey fine-scale temporal information.
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Affiliation(s)
- Rebecca A Mease
- Department of Neurosurgery, Technische Universität München, Munich 81675, Germany; Neurobiology and Behavior Graduate Program, University of Washington, Seattle, WA 98195, USA.
| | - Thomas Kuner
- Department of Functional Neuroanatomy, Heidelberg University, Heidelberg 69120, Germany
| | - Adrienne L Fairhall
- Department of Physiology and Biophysics, University of Washington, Seattle, WA 98195, USA
| | - Alexander Groh
- Department of Neurosurgery, Technische Universität München, Munich 81675, Germany
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17
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Abstract
Adaptation is fundamental to life. All organisms adapt over timescales that span from evolution to generations and lifetimes to moment-by-moment interactions. The nervous system is particularly adept at rapidly adapting to change, and this in fact may be one of its fundamental principles of organization and function. Rapid forms of sensory adaptation have been well documented across all sensory modalities in a wide range of organisms, yet we do not have a comprehensive understanding of the adaptive cellular mechanisms that ultimately give rise to the corresponding percepts, due in part to the complexity of the circuitry. In this Perspective, we aim to build links between adaptation at multiple scales of neural circuitry by investigating the differential adaptation across brain regions and sub-regions and across specific cell types, for which the explosion of modern tools has just begun to enable. This investigation points to a set of challenges for the field to link functional observations to adaptive properties of the neural circuit that ultimately underlie percepts.
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Affiliation(s)
- Clarissa J Whitmire
- Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA 30332, USA
| | - Garrett B Stanley
- Wallace H. Coulter Department of Biomedical Engineering, Georgia Institute of Technology and Emory University, Atlanta, GA 30332, USA.
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18
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Liu B, Macellaio MV, Osborne LC. Efficient sensory cortical coding optimizes pursuit eye movements. Nat Commun 2016; 7:12759. [PMID: 27611214 PMCID: PMC5023965 DOI: 10.1038/ncomms12759] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/10/2016] [Accepted: 07/29/2016] [Indexed: 01/16/2023] Open
Abstract
In the natural world, the statistics of sensory stimuli fluctuate across a wide range. In theory, the brain could maximize information recovery if sensory neurons adaptively rescale their sensitivity to the current range of inputs. Such adaptive coding has been observed in a variety of systems, but the premise that adaptation optimizes behaviour has not been tested. Here we show that adaptation in cortical sensory neurons maximizes information about visual motion in pursuit eye movements guided by that cortical activity. We find that gain adaptation drives a rapid (<100 ms) recovery of information after shifts in motion variance, because the neurons and behaviour rescale their sensitivity to motion fluctuations. Both neurons and pursuit rapidly adopt a response gain that maximizes motion information and minimizes tracking errors. Thus, efficient sensory coding is not simply an ideal standard but a description of real sensory computation that manifests in improved behavioural performance.
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Affiliation(s)
- Bing Liu
- Department of Neurobiology, The University of Chicago, 947 East 58th Street, P415 MC0928, Chicago, Illinois 60637, USA
| | - Matthew V. Macellaio
- Department of Neurobiology, The University of Chicago, 947 East 58th Street, P415 MC0928, Chicago, Illinois 60637, USA
| | - Leslie C. Osborne
- Department of Neurobiology, The University of Chicago, 947 East 58th Street, P415 MC0928, Chicago, Illinois 60637, USA
- Department of Organismal Biology and Anatomy, The University of Chicago, Chicago, Illinois 60637, USA
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19
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Williamson RS, Ahrens MB, Linden JF, Sahani M. Input-Specific Gain Modulation by Local Sensory Context Shapes Cortical and Thalamic Responses to Complex Sounds. Neuron 2016; 91:467-81. [PMID: 27346532 PMCID: PMC4961224 DOI: 10.1016/j.neuron.2016.05.041] [Citation(s) in RCA: 37] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/24/2015] [Revised: 10/25/2015] [Accepted: 05/12/2016] [Indexed: 01/19/2023]
Abstract
Sensory neurons are customarily characterized by one or more linearly weighted receptive fields describing sensitivity in sensory space and time. We show that in auditory cortical and thalamic neurons, the weight of each receptive field element depends on the pattern of sound falling within a local neighborhood surrounding it in time and frequency. Accounting for this change in effective receptive field with spectrotemporal context improves predictions of both cortical and thalamic responses to stationary complex sounds. Although context dependence varies among neurons and across brain areas, there are strong shared qualitative characteristics. In a spectrotemporally rich soundscape, sound elements modulate neuronal responsiveness more effectively when they coincide with sounds at other frequencies, and less effectively when they are preceded by sounds at similar frequencies. This local-context-driven lability in the representation of complex sounds—a modulation of “input-specific gain” rather than “output gain”—may be a widespread motif in sensory processing. Gain of neuronal responses to sound components varies with immediate acoustic context “Contextual gain fields” can be estimated from neuronal responses to complex sounds Coincident sound at different frequencies boosts gain in cortex and thalamus Preceding sound at similar frequency reduces gain for longer in cortex than thalamus
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Affiliation(s)
- Ross S Williamson
- Gatsby Computational Neuroscience Unit, University College London, London W1T 4JG, UK; Centre for Mathematics and Physics in the Life Sciences and Experimental Biology, University College London, London WC1E 6BT, UK
| | - Misha B Ahrens
- Department of Molecular and Cellular Biology, Harvard University, Cambridge, MA 02138, USA; Computational and Biological Learning Lab, Department of Engineering, University of Cambridge, Cambridge CB2 1PZ, UK
| | - Jennifer F Linden
- Ear Institute, University College London, London WC1X 8EE, UK; Department of Neuroscience, Physiology and Pharmacology, University College London, London WC1E 6BT, UK.
| | - Maneesh Sahani
- Gatsby Computational Neuroscience Unit, University College London, London W1T 4JG, UK.
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20
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On-going computation of whisking phase by mechanoreceptors. Nat Neurosci 2016; 19:487-93. [PMID: 26780508 DOI: 10.1038/nn.4221] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/02/2015] [Accepted: 12/04/2015] [Indexed: 12/25/2022]
Abstract
To attribute spatial meaning to sensory information, the state of the sensory organ must be represented in the nervous system. In the rodent's vibrissal system, the whisking-cycle phase has been identified as a key coordinate, and phase-based representation of touch has been reported in the somatosensory cortex. Where and how phase is extracted in the ascending afferent pathways remains unknown. Using a closed-loop interface in anesthetized rats, we found that whisking phase is already encoded in a frequency- and amplitude-invariant manner by primary vibrissal afferents. We found that, for naturally constrained whisking dynamics, such invariant phase coding could be obtained by tuning each receptor to a restricted kinematic subspace. Invariant phase coding was preserved in the brainstem, where paralemniscal neurons filtered out the slowly evolving offset, whereas lemniscal neurons preserved it. These results demonstrate accurate, perceptually relevant, mechanically based processing at the sensor level.
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21
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A neural mechanism for time-window separation resolves ambiguity of adaptive coding. PLoS Biol 2015; 13:e1002096. [PMID: 25761097 PMCID: PMC4356587 DOI: 10.1371/journal.pbio.1002096] [Citation(s) in RCA: 14] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/20/2014] [Accepted: 01/30/2015] [Indexed: 11/19/2022] Open
Abstract
The senses of animals are confronted with changing environments and different contexts. Neural adaptation is one important tool to adjust sensitivity to varying intensity ranges. For instance, in a quiet night outdoors, our hearing is more sensitive than when we are confronted with the plurality of sounds in a large city during the day. However, adaptation also removes available information on absolute sound levels and may thus cause ambiguity. Experimental data on the trade-off between benefits and loss through adaptation is scarce and very few mechanisms have been proposed to resolve it. We present an example where adaptation is beneficial for one task—namely, the reliable encoding of the pattern of an acoustic signal—but detrimental for another—the localization of the same acoustic stimulus. With a combination of neurophysiological data, modeling, and behavioral tests, we show that adaptation in the periphery of the auditory pathway of grasshoppers enables intensity-invariant coding of amplitude modulations, but at the same time, degrades information available for sound localization. We demonstrate how focusing the response of localization neurons to the onset of relevant signals separates processing of localization and pattern information temporally. In this way, the ambiguity of adaptive coding can be circumvented and both absolute and relative levels can be processed using the same set of peripheral neurons. Neuronal data, computational modeling, and behavioral experiments reveal how the conflict between sensory adaptation and sound localization is resolved in the grasshopper auditory system, allowing processing of both absolute and relative sound levels. Smell, vision, hearing—virtually all of our senses adapt their sensitivity to cope with the varying environment. Adaptation removes information about absolute stimulus intensity available to the brain, as this information is usually of little relevance for sensory representation. For some tasks, however, knowledge of absolute stimulus intensities is essential. How sensory pathways cope with this conflict remains an open question. We addressed this question in the grasshopper auditory system, in which comparison of absolute intensities of conspecific calls at both ears is crucial for mate localization. We recorded activity from three levels in the auditory pathway, showing that adaptation in the peripheral auditory system indeed removes information about absolute intensities. We discovered that strong negative feedback restricts coding of sound direction in the central auditory system to the very beginning of a stimulus, when peripheral adaptation has not yet acted. By using a computational model, we show that this central mechanism enables localization of the sound source over a wide range of stimulus intensities and that its time course is well matched to the time course of peripheral adaptation. In a final step, we confirmed predictions from our model in behavioral experiments on sound localization.
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22
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Martin-Cortecero J, Nuñez A. Tactile response adaptation to whisker stimulation in the lemniscal somatosensory pathway of rats. Brain Res 2014; 1591:27-37. [DOI: 10.1016/j.brainres.2014.10.002] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/26/2014] [Revised: 09/17/2014] [Accepted: 10/01/2014] [Indexed: 11/29/2022]
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23
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Maravall M, Diamond ME. Algorithms of whisker-mediated touch perception. Curr Opin Neurobiol 2014; 25:176-86. [PMID: 24549178 DOI: 10.1016/j.conb.2014.01.014] [Citation(s) in RCA: 30] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2014] [Accepted: 01/23/2014] [Indexed: 11/18/2022]
Abstract
Comparison of the functional organization of sensory modalities can reveal the specialized mechanisms unique to each modality as well as processing algorithms that are common across modalities. Here we examine the rodent whisker system. The whisker's mechanical properties shape the forces transmitted to specialized receptors. The sensory and motor systems are intimately interconnected, giving rise to two forms of sensation: generative and receptive. The sensory pathway is a test bed for fundamental concepts in computation and coding: hierarchical feature detection, sparseness, adaptive representations, and population coding. The central processing of signals can be considered a sequence of filters. At the level of cortex, neurons represent object features by a coordinated population code which encompasses cells with heterogeneous properties.
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Affiliation(s)
- Miguel Maravall
- Instituto de Neurociencias de Alicante UMH-CSIC, Campus de San Juan, Apartado 18, 03550 Sant Joan d'Alacant, Spain
| | - Mathew E Diamond
- Tactile Perception and Learning Lab, International School for Advanced Studies-SISSA, Via Bonomea 265, 34136 Trieste, Italy.
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