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Trevail AM, Nicoll MAC, Freeman R, Le Corre M, Schwarz J, Jaeger A, Bretagnolle V, Calabrese L, Feare C, Lebarbenchon C, Norris K, Orlowski S, Pinet P, Plot V, Rocamora G, Shah N, Votier SC. Tracking seabird migration in the tropical Indian Ocean reveals basin-scale conservation need. Curr Biol 2023; 33:5247-5256.e4. [PMID: 37972589 DOI: 10.1016/j.cub.2023.10.060] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/19/2023] [Revised: 09/20/2023] [Accepted: 10/26/2023] [Indexed: 11/19/2023]
Abstract
Understanding marine predator distributions is an essential component of arresting their catastrophic declines.1,2,3,4 In temperate, polar, and upwelling seas, predictable oceanographic features can aggregate migratory predators, which benefit from site-based protection.5,6,7,8 In more oligotrophic tropical waters, however, it is unclear whether environmental conditions create similar multi-species hotspots. We track the non-breeding movements and habitat preferences of a tropical seabird assemblage (n = 348 individuals, 9 species, and 10 colonies in the western Indian Ocean), which supports globally important biodiversity.9,10,11,12 We mapped species richness from tracked populations and then predicted the same diversity measure for all known Indian Ocean colonies. Most species had large non-breeding ranges, low or variable residency patterns, and specific habitat preferences. This in turn revealed that maximum species richness covered >3.9 million km2, with no focused aggregations, in stark contrast to large-scale tracking studies in all other ocean basins.5,6,7,13,14 High species richness was captured by existing marine protected areas (MPAs) in the region; however, most occurred in the unprotected high seas beyond national jurisdictions. Seabirds experience cumulative anthropogenic impacts13 and high mortality15,16 during non-breeding. Therefore, our results suggest that seabird conservation in the tropical Indian Ocean requires an ocean-wide perspective, including high seas legislation.17 As restoration actions improve the outlook for tropical seabirds on land18,19,20,21,22 and environmental change reshapes the habitats that support them at sea,15,16 appropriate marine conservation will be crucial for their long-term recovery and whole ecosystem restoration.
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Affiliation(s)
- Alice M Trevail
- Environment and Sustainability Institute, University of Exeter, Penryn TR10 9FE, UK.
| | - Malcolm A C Nicoll
- Institute of Zoology, Zoological Society of London, Regent's Park, London NW14RY, UK
| | - Robin Freeman
- Institute of Zoology, Zoological Society of London, Regent's Park, London NW14RY, UK
| | - Matthieu Le Corre
- Écologie marine tropicale des océans Pacifique et Indien, UMR ENTROPIE, Université de la Réunion, 15 Avenue René Cassin, BP 7151, 97715 Saint Denis, La Réunion, France
| | - Jill Schwarz
- School of Biological and Marine Sciences, University of Plymouth, Drake Circus, Plymouth PL4 8AA, UK
| | - Audrey Jaeger
- Écologie marine tropicale des océans Pacifique et Indien, UMR ENTROPIE, Université de la Réunion, 15 Avenue René Cassin, BP 7151, 97715 Saint Denis, La Réunion, France
| | - Vincent Bretagnolle
- Centre d'Etudes Biologiques de Chizé (CEBC-CNRS), 79360 Beauvoir sur Niort, France
| | - Licia Calabrese
- Centre d'Etudes Biologiques de Chizé (CEBC-CNRS), 79360 Beauvoir sur Niort, France; Island Conservation Society, Pointe Larue, Mahé P.O Box 775, Seychelles; Island Biodiversity and Conservation Centre of the University of Seychelles, Anse Royale, Mahé, Seychelles
| | - Chris Feare
- WildWings Bird Management, 2 North View Cottages, Grayswood Common, Haslemere, Surrey GU27 2DN, UK; School of Biological, Earth and Environmental Sciences, Faculty of Science, University of New South Wales (UNSW), NSW, Sydney 2052, Australia
| | - Camille Lebarbenchon
- Université de la Réunion, UMR Processus Infectieux en Milieu Insulaire Tropical (PIMIT), INSERM 1187, CNRS 9192, IRD 249, Saint Denis, La Réunion, France
| | - Ken Norris
- Natural History Museum, Cromwell Road, London SW7 5BD, UK
| | - Sabine Orlowski
- Écologie marine tropicale des océans Pacifique et Indien, UMR ENTROPIE, Université de la Réunion, 15 Avenue René Cassin, BP 7151, 97715 Saint Denis, La Réunion, France
| | - Patrick Pinet
- Parc national de La Réunion, Life+ Pétrels. 258 Rue de la République, 97431 Plaine des Palmistes, La Réunion, France
| | - Virginie Plot
- Écologie marine tropicale des océans Pacifique et Indien, UMR ENTROPIE, Université de la Réunion, 15 Avenue René Cassin, BP 7151, 97715 Saint Denis, La Réunion, France
| | - Gerard Rocamora
- Centre d'Etudes Biologiques de Chizé (CEBC-CNRS), 79360 Beauvoir sur Niort, France; Island Biodiversity and Conservation Centre of the University of Seychelles, Anse Royale, Mahé, Seychelles
| | - Nirmal Shah
- Nature Seychelles, P.O. Box 1310, The Centre for Environment and Education, Roche Caiman, Mahé, Seychelles; The Centre for Environment and Education, Roche Caiman, Mahé, Seychelles
| | - Stephen C Votier
- The Lyell Centre, Heriot-Watt University, Edinburgh EH14 4AS, UK.
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Storrie L, Loseto LL, Sutherland EL, MacPhee SA, O'Corry-Crowe G, Hussey NE. Do beluga whales truly migrate? Testing a key trait of the classical migration syndrome. MOVEMENT ECOLOGY 2023; 11:53. [PMID: 37649126 PMCID: PMC10469428 DOI: 10.1186/s40462-023-00416-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2023] [Accepted: 08/05/2023] [Indexed: 09/01/2023]
Abstract
BACKGROUND Migration enables organisms to access resources in separate regions that have predictable but asynchronous spatiotemporal variability in habitat quality. The classical migration syndrome is defined by key traits including directionally persistent long-distance movements during which maintenance activities are suppressed. But recently, seasonal round-trip movements have frequently been considered to constitute migration irrespective of the traits required to meet this movement type, conflating common outcomes with common traits required for a mechanistic understanding of long-distance movements. We aimed to test whether a cetacean ceases foraging during so-called migratory movements, conforming to a trait that defines classical migration. METHODS We used location and dive data collected by satellite tags deployed on beluga whales (Delphinapterus leucas) from the Eastern Beaufort Sea population, which undertake long-distance directed movements between summer and winter areas. To identify phases of directionally persistent travel, behavioural states (area-restricted search, ARS; or Transit) were decoded using a hidden-Markov model, based on step length and turning angle. Established dive profiles were then used as a proxy for foraging, to test the hypothesis that belugas cease foraging during these long-distance transiting movements, i.e., they suppress maintenance activities. RESULTS Belugas principally made directed horizontal movements when moving between summer and winter residency areas, remaining in a Transit state for an average of 75.4% (range = 58.5-87.2%) of the time. All individuals, however, exhibited persistent foraging during Transit movements (75.8% of hours decoded as the Transit state had ≥ 1 foraging dive). These data indicate that belugas actively search for and/or respond to resources during these long-distance movements that are typically called a migration. CONCLUSIONS The long-distance movements of belugas do not conform to the traits defining the classical migration syndrome, but instead have characteristics of both migratory and nomadic behaviour, which may prove adaptive in the face of unpredictable environmental change. Such patterns are likely present in other cetaceans that have been labeled as migratory. Examination of not only horizontal movement state, but also the vertical behaviour of aquatic animals during directed movements is essential for identifying whether a species exhibits traits of the classical migration syndrome or another long-distance movement strategy, enabling improved ecological inference.
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Affiliation(s)
- Luke Storrie
- Centre for Earth Observation Science, Department of Environment and Geography, The University of Manitoba, Winnipeg, MB, Canada.
- Freshwater Institute, Fisheries and Oceans Canada, Winnipeg, MB, Canada.
| | - Lisa L Loseto
- Centre for Earth Observation Science, Department of Environment and Geography, The University of Manitoba, Winnipeg, MB, Canada
- Freshwater Institute, Fisheries and Oceans Canada, Winnipeg, MB, Canada
| | - Emma L Sutherland
- Centre for Earth Observation Science, Department of Environment and Geography, The University of Manitoba, Winnipeg, MB, Canada
- Freshwater Institute, Fisheries and Oceans Canada, Winnipeg, MB, Canada
| | - Shannon A MacPhee
- Freshwater Institute, Fisheries and Oceans Canada, Winnipeg, MB, Canada
| | - Greg O'Corry-Crowe
- Harbor Branch Oceanographic Institute, Florida Atlantic University, Fort Pierce, FL, USA
| | - Nigel E Hussey
- Department of Integrative Biology, University of Windsor, Windsor, ON, Canada
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3
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Remote and non-invasive quantification of ‘Tattoo Skin Disease-Like’ dermatopathy in endangered Arabian Sea humpback whales using drone photography. Mamm Biol 2023. [DOI: 10.1007/s42991-022-00337-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/14/2023]
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4
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Van Bressem MF, Van Waerebeek K, Duignan PJ. Tattoo Skin Disease in Cetacea: A Review, with New Cases for the Northeast Pacific. Animals (Basel) 2022; 12:ani12243581. [PMID: 36552501 PMCID: PMC9774126 DOI: 10.3390/ani12243581] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2022] [Revised: 12/12/2022] [Accepted: 12/14/2022] [Indexed: 12/23/2022] Open
Abstract
Tattoo skin disease (TSD) is a poxviral dermatopathy diagnosed in cetaceans. We review the literature on TSD aetiology, clinical characteristics, pathology and epidemiology and evaluate immune responses against the virus. In addition, necropsy reports for fifty-five harbour porpoises (Phocoena phocoena), twenty-two Delphinidae and four Kogiidae stranded in northern California in 2018-2021 were checked for diagnostic tattoo lesions. TSD occurs in the Mediterranean, North and Barents Seas, as well as in the Atlantic, eastern Pacific and Indian Oceans in at least 21 cetacean species, with varying prevalence. Two cetacean poxvirus (CePV) clades are recognised: CePV-1 in odontocetes and CePV-2 in mysticetes. CePV-1 isolates were recovered from six Delphinidae and one Phocoenidae in the Americas, Europe and Hong Kong. Strains from Delphinidae are closely related. Among Phocoenidae, poxviruses were sampled only in harbour porpoises around the British Isles. CePV-2 isolates were obtained from southern right whales (Eubalaena australis) and a bowhead whale (Balaena mysticetus). In healthy animals, an immune response develops over time, with young calves protected by maternal immunity. Salinity and sea surface temperature do not seem to influence TSD prevalence in free-ranging cetaceans. High concentrations of immunotoxic halogenated organochlorines may cause a more severe clinical disease. Substitution and loss of genes involved in anti-viral immunity may favour CePV entry, replication and persistence in the epidermis. Off California, Delphinidae were less often (26.3%) affected by TSD than harbour porpoises (43.6%). Male porpoises were significantly more prone (58.1%) to show clinical disease than females (25%). Among males, TSD affected a high proportion of juveniles and subadults. TSD was not detected in the Kogiidae.
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Affiliation(s)
- Marie-Françoise Van Bressem
- Cetacean Conservation Medicine Group, Peruvian Centre for Cetacean Research, Museo de Delfines, Lima 20, Peru
- Correspondence:
| | - Koen Van Waerebeek
- Cetacean Conservation Medicine Group, Peruvian Centre for Cetacean Research, Museo de Delfines, Lima 20, Peru
- ProDelphinus, Miraflores, Lima 18, Peru
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Oliveira FA, Pinto ACS, Duarte CL, Taranto AG, Lorenzato Junior E, Cordeiro CF, Carvalho DT, Varotti FP, Fonseca AL. Evaluation of antiplasmodial activity in silico and in vitro of N-acylhydrazone derivatives. BMC Chem 2022; 16:50. [PMID: 35810303 PMCID: PMC9271247 DOI: 10.1186/s13065-022-00843-9] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/25/2022] [Accepted: 06/17/2022] [Indexed: 11/21/2022] Open
Abstract
N-acylhydrazones are considered privileged structures in medicinal chemistry, being part of antimicrobial compounds (for example). In this study we show the activity of N-acylhydrazone compounds, namely AH1, AH2, AH4, AH5 in in vitro tests against the chloroquine-resistant strain of Plasmodium falciparum (W2) and against WI26 VA-4 human cell lines. All compounds showed low cytotoxicity (LC50 > 100 µM). The AH5 compound was the most active against Plasmodium falciparum, with an IC50 value of 0.07 μM. AH4 and AH5 were selected among the tested compounds for molecular docking calculations to elucidate possible targets involved in their mechanism of action and the SwissADME analysis to predict their pharmacokinetic profile. The AH5 compound showed affinity for 12 targets with low selectivity, while the AH4 compound had greater affinity for only one target (3PHC). These compounds met Lipinski's standards in the ADME in silico tests, indicating good bioavailability results. These results demonstrate that these N-acylhydrazone compounds are good candidates for future preclinical studies against malaria.
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Affiliation(s)
- Fernanda A Oliveira
- Núcleo de Pesquisa Em Química Biológica (NQBio), Universidade Federal de São João Del Rei, Campus Centro Oeste, Divinópolis, MG, 35501-296, Brazil
| | - Ana Claudia S Pinto
- Núcleo de Pesquisa Em Química Biológica (NQBio), Universidade Federal de São João Del Rei, Campus Centro Oeste, Divinópolis, MG, 35501-296, Brazil.
| | - Caique L Duarte
- Núcleo de Pesquisa Em Química Biológica (NQBio), Universidade Federal de São João Del Rei, Campus Centro Oeste, Divinópolis, MG, 35501-296, Brazil
| | - Alex G Taranto
- Núcleo de Pesquisa Em Química Biológica (NQBio), Universidade Federal de São João Del Rei, Campus Centro Oeste, Divinópolis, MG, 35501-296, Brazil
| | - Eder Lorenzato Junior
- Laboratório de Pesquisa Em Química Farmacêutica, Universidade Federal de Alfenas, Campus Alfenas, Alfenas, MG, 37130-001, Brazil
| | - Cleydson Finotti Cordeiro
- Laboratório de Pesquisa Em Química Farmacêutica, Universidade Federal de Alfenas, Campus Alfenas, Alfenas, MG, 37130-001, Brazil
| | - Diogo T Carvalho
- Laboratório de Pesquisa Em Química Farmacêutica, Universidade Federal de Alfenas, Campus Alfenas, Alfenas, MG, 37130-001, Brazil
| | - Fernando P Varotti
- Núcleo de Pesquisa Em Química Biológica (NQBio), Universidade Federal de São João Del Rei, Campus Centro Oeste, Divinópolis, MG, 35501-296, Brazil
| | - Amanda L Fonseca
- Núcleo de Pesquisa Em Química Biológica (NQBio), Universidade Federal de São João Del Rei, Campus Centro Oeste, Divinópolis, MG, 35501-296, Brazil.
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6
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Soldevilla MS, Debich AJ, Garrison LP, Hildebrand JA, Wiggins SM. Rice’s whales in the northwestern Gulf of Mexico: call variation and occurrence beyond the known core habitat. ENDANGER SPECIES RES 2022. [DOI: 10.3354/esr01196] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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Zandberg L, Lachlan RF, Lamoni L, Garland EC. Global cultural evolutionary model of humpback whale song. Philos Trans R Soc Lond B Biol Sci 2021; 376:20200242. [PMID: 34482732 PMCID: PMC8419575 DOI: 10.1098/rstb.2020.0242] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Humpback whale song is an extraordinary example of vocal cultural behaviour. In northern populations, the complex songs show long-lasting traditions that slowly evolve, while in the South Pacific, periodic revolutions occur when songs are adopted from neighbouring populations and rapidly spread. In this species, vocal learning cannot be studied in the laboratory, learning is instead inferred from the songs' complexity and patterns of transmission. Here, we used individual-based cultural evolutionary simulations of the entire Southern and Northern Hemisphere humpback whale populations to formalize this process of inference. We modelled processes of song mutation and patterns of contact among populations and compared our model with patterns of song theme sharing measured in South Pacific populations. Low levels of mutation in combination with rare population interactions were sufficient to closely fit the pattern of diversity in the South Pacific, including the distinctive pattern of west-to-east revolutions. Interestingly, the same learning parameters that gave rise to revolutions in the Southern Hemisphere simulations gave rise to evolutionary patterns of cultural evolution in the Northern Hemisphere populations. Our study demonstrates how cultural evolutionary approaches can be used to make inferences about the learning processes underlying cultural transmission and how they might generate emergent population-level processes. This article is part of the theme issue ‘Vocal learning in animals and humans’.
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Affiliation(s)
- Lies Zandberg
- Department of Psychology, Royal Holloway University of London, Egham Hill, Egham TW0 0EX, UK
| | - Robert F Lachlan
- Department of Psychology, Royal Holloway University of London, Egham Hill, Egham TW0 0EX, UK
| | - Luca Lamoni
- Centre for Social Learning and Cognitive Evolution, and Sea Mammal Research Unit, Scottish Oceans Institute, School of Biology, University of St Andrews, St Andrews, Fife KY16 8LB, UK
| | - Ellen C Garland
- Centre for Social Learning and Cognitive Evolution, and Sea Mammal Research Unit, Scottish Oceans Institute, School of Biology, University of St Andrews, St Andrews, Fife KY16 8LB, UK
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Kowarski K, Cerchio S, Whitehead H, Moors-Murphy H. Where, when, and why do western North Atlantic humpback whales begin to sing? BIOACOUSTICS 2021. [DOI: 10.1080/09524622.2021.1972838] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/20/2022]
Affiliation(s)
- Katie Kowarski
- Department of Biology, Dalhousie University, Halifax, Canada
- JASCO Applied Sciences, Dartmouth, Canada
| | | | - Hal Whitehead
- Department of Biology, Dalhousie University, Halifax, Canada
| | - Hilary Moors-Murphy
- Fisheries and Oceans Canada, Bedford Institute of Oceanography, Dartmouth, Canada
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9
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Cerchio S, Willson A, Leroy EC, Muirhead C, Al Harthi S, Baldwin R, Cholewiak D, Collins T, Minton G, Rasoloarijao T, Rogers TL, Sarrouf Willson M. A new blue whale song-type described for the Arabian Sea and Western Indian Ocean. ENDANGER SPECIES RES 2020. [DOI: 10.3354/esr01096] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
Abstract
Blue whales Balaenoptera musculus in the Indian Ocean (IO) are currently thought to represent 2 or 3 subspecies (B. m. intermedia, B. m. brevicauda, B. m. indica), and believed to be structured into 4 populations, each with a diagnostic song-type. Here we describe a previously unreported song-type that implies the probable existence of a population that has been undetected or conflated with another population. The novel song-type was recorded off Oman in the northern IO/Arabian Sea, off the western Chagos Archipelago in the equatorial central IO, and off Madagascar in the southwestern IO. As this is the only blue whale song that has been identified in the western Arabian Sea, we label it the ‘Northwest Indian Ocean’ song-type to distinguish it from other regional song-types. Spatiotemporal variation suggested a distribution west of 70°E, with potential affinity for the northern IO/Arabian Sea, and only minor presence in the southwestern IO. Timing of presence off Oman suggested that intensive illegal Soviet whaling that took 1294 blue whales in the 1960s likely targeted this population, as opposed to the more widely distributed ‘Sri Lanka’ acoustic population as previously assumed. Based upon geographic distribution and potential aseasonal reproduction found in the Soviet catch data, we suggest that if there is a northern IO subspecies (B. m. indica), it is likely this population. Moreover, the potentially restricted range, intensive historic whaling, and the fact that the song-type has been previously undetected, suggests a small population that is in critical need of status assessment and conservation action.
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Affiliation(s)
- S Cerchio
- African Aquatic Conservation Fund, Chilmark, MA 02535, USA
- New England Aquarium, Anderson Cabot Center for Ocean Life, Boston, MA 02110, USA
- Center for Coastal Studies, Provincetown, MA 02657, USA
| | - A Willson
- Five Oceans Environmental Services, Shatti al Qurm, Muscat PC131, Sultanate of Oman
| | - EC Leroy
- Evolution and Ecology Research Centre, School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, NSW 2052, Australia
| | - C Muirhead
- New England Aquarium, Anderson Cabot Center for Ocean Life, Boston, MA 02110, USA
- Division of Marine Science and Conservation, Duke University Marine Laboratory, Beaufort, NC 28516, USA
| | - S Al Harthi
- Environment Society of Oman, Ruwi PC112, Sultanate of Oman
| | - R Baldwin
- Five Oceans Environmental Services, Shatti al Qurm, Muscat PC131, Sultanate of Oman
| | - D Cholewiak
- NOAA Fisheries, Northeast Fisheries Science Center, Protected Species Branch, Woods Hole, MA 02543, USA
| | - T Collins
- Wildlife Conservation Society, Ocean Giants Program, Bronx, NY 10460, USA
| | - G Minton
- Megaptera Marine Conservation, The Hague 2242 PT, Netherlands
| | - T Rasoloarijao
- African Aquatic Conservation Fund, Chilmark, MA 02535, USA
- Institut Halieutique et des Sciences Marines, Toliara 601, Madagascar
| | - TL Rogers
- Evolution and Ecology Research Centre, School of Biological, Earth and Environmental Sciences, University of New South Wales, Sydney, NSW 2052, Australia
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10
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Rivera-León VE, Urbán J, Mizroch S, Brownell RL, Oosting T, Hao W, Palsbøll PJ, Bérubé M. Long-term isolation at a low effective population size greatly reduced genetic diversity in Gulf of California fin whales. Sci Rep 2019; 9:12391. [PMID: 31455830 PMCID: PMC6712047 DOI: 10.1038/s41598-019-48700-5] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2018] [Accepted: 08/06/2019] [Indexed: 11/09/2022] Open
Abstract
The Gulf of California, Mexico is home to many cetacean species, including a presumed resident population of fin whales, Balaenoptera physalus. Past studies reported very low levels of genetic diversity among Gulf of California fin whales and a significant level of genetic differentiation from con-specifics in the eastern North Pacific. The aim of the present study was to assess the degree and timing of the isolation of Gulf of California fin whales in a population genetic analysis of 18 nuclear microsatellite genotypes from 402 samples and 565 mitochondrial control region DNA sequences (including mitochondrial sequences retrieved from NCBI). The analyses revealed that the Gulf of California fin whale population was founded ~2.3 thousand years ago and has since remained at a low effective population size (~360) and isolated from the eastern North Pacific (Nem between 0.89-1.4). The low effective population size and high degree of isolation implied that Gulf of California fin whales are vulnerable to the negative effects of genetic drift, human-caused mortality and habitat change.
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Affiliation(s)
- Vania E Rivera-León
- Marine Evolution and Conservation, Groningen Institute of Evolutionary Life Sciences, University of Groningen, Nijenborgh 7, 9747 AG, Groningen, The Netherlands.
| | - Jorge Urbán
- Departamento de Ciencias Marinas y Costeras, Universidad Autónoma de Baja California Sur, Km 5.5 Carretera al Sur, 23081, La Paz, Baja California Sur, Mexico
| | - Sally Mizroch
- Blue Sea Research PO Box 15805, Seattle, WA, 98115, United States of America
| | - Robert L Brownell
- Southwest Fisheries Science Center, NOAA Fisheries, 34500 Highway 1, Monterey, CA, 93940, United States of America
| | - Tom Oosting
- Marine Evolution and Conservation, Groningen Institute of Evolutionary Life Sciences, University of Groningen, Nijenborgh 7, 9747 AG, Groningen, The Netherlands
| | - Wensi Hao
- Marine Evolution and Conservation, Groningen Institute of Evolutionary Life Sciences, University of Groningen, Nijenborgh 7, 9747 AG, Groningen, The Netherlands
| | - Per J Palsbøll
- Marine Evolution and Conservation, Groningen Institute of Evolutionary Life Sciences, University of Groningen, Nijenborgh 7, 9747 AG, Groningen, The Netherlands.
- Centre for Coastal Studies, 5 Holway Avenue, Provincetown, Massachusetts, 02657, United States of America.
| | - Martine Bérubé
- Marine Evolution and Conservation, Groningen Institute of Evolutionary Life Sciences, University of Groningen, Nijenborgh 7, 9747 AG, Groningen, The Netherlands.
- Centre for Coastal Studies, 5 Holway Avenue, Provincetown, Massachusetts, 02657, United States of America.
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11
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Moore MK, Frazier K. Humans Are Animals, Too: Critical Commonalities and Differences Between Human and Wildlife Forensic Genetics. J Forensic Sci 2019; 64:1603-1621. [DOI: 10.1111/1556-4029.14066] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/01/2018] [Revised: 03/10/2019] [Accepted: 04/08/2019] [Indexed: 12/31/2022]
Affiliation(s)
- M. Katherine Moore
- Forensic Laboratory Conservation Biology Division Northwest Fisheries Science Center, National Marine Fisheries Service National Oceanic and Atmospheric Administration 219 Fort Johnson Road Charleston SC29412
| | - Kim Frazier
- Wyoming Game and Fish Wildlife Forensic and Fish Health Laboratory 1212 South Adams Street Laramie WY 82070
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12
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Population structure of North Atlantic and North Pacific sei whales (Balaenoptera borealis) inferred from mitochondrial control region DNA sequences and microsatellite genotypes. CONSERV GENET 2018. [DOI: 10.1007/s10592-018-1076-5] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/26/2022]
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13
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Cryptic lineage differentiation among Indo-Pacific bottlenose dolphins (Tursiops aduncus) in the northwest Indian Ocean. Mol Phylogenet Evol 2018; 122:1-14. [DOI: 10.1016/j.ympev.2017.12.027] [Citation(s) in RCA: 16] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2017] [Revised: 12/15/2017] [Accepted: 12/26/2017] [Indexed: 11/19/2022]
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14
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Tracing the spatio-temporal dynamics of endangered fin whales (Balaenoptera physalus) within baleen whale (Mysticeti) lineages: a mitogenomic perspective. Genetica 2017; 145:603-612. [PMID: 29103106 DOI: 10.1007/s10709-017-9988-4] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/28/2017] [Accepted: 09/18/2017] [Indexed: 10/18/2022]
Abstract
To explore the spatio-temporal dynamics of endangered fin whales (Balaenoptera physalus) within the baleen whale (Mysticeti) lineages, we analyzed 148 published mitochondrial genome sequences of baleen whales. We used a Bayesian coalescent approach as well as Bayesian inferences and maximum likelihood methods. The results showed that the fin whales had a single maternal origin, and that there is a significant correlation between geographic location and evolution of global fin whales. The most recent common female ancestor of this species lived approximately 9.88 million years ago (Mya). Here, North Pacific fin whales first appeared about 7.48 Mya, followed by a subsequent divergence in Southern Hemisphere approximately 6.63 Mya and North Atlantic about 4.42 Mya. Relatively recently, approximately 1.76 and 1.42 Mya, there were two additional occurrences of North Pacific populations; one originated from the Southern Hemisphere and the other from an uncertain location. The evolutionary rate of this species was 1.002 × 10-3 substitutions/site/My. Our Bayesian skyline plot illustrates that the fin whale population has the rapid expansion event since ~ 2.5 Mya, during the Quaternary glaciation stage. Additionally, this study indicates that the fin whale has a sister group relationship with humpback whale (Meganoptera novaeangliae) within the baleen whale lineages. Of the 16 genomic regions, NADH5 showed the most powerful signal for baleen whale phylogenetics. Interestingly, fin whales have 16 species-specific amino acid residues in eight mitochondrial genes: NADH2, COX2, COX3, ATPase6, ATPase8, NADH4, NADH5, and Cytb.
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Rosenbaum HC, Kershaw F, Mendez M, Pomilla C, Leslie MS, Findlay KP, Best PB, Collins T, Vely M, Engel MH, Baldwin R, Minton G, Meÿer M, Flórez-González L, Poole MM, Hauser N, Garrigue C, Brasseur M, Bannister J, Anderson M, Olavarría C, Baker CS. First circumglobal assessment of Southern Hemisphere humpback whale mitochondrial genetic variation and implications for management. ENDANGER SPECIES RES 2017. [DOI: 10.3354/esr00822] [Citation(s) in RCA: 20] [Impact Index Per Article: 2.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/23/2022] Open
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Kershaw F, Carvalho I, Loo J, Pomilla C, Best PB, Findlay KP, Cerchio S, Collins T, Engel MH, Minton G, Ersts P, Barendse J, Kotze PGH, Razafindrakoto Y, Ngouessono S, Meÿer M, Thornton M, Rosenbaum HC. Multiple processes drive genetic structure of humpback whale (Megaptera novaeangliae) populations across spatial scales. Mol Ecol 2017; 26:977-994. [DOI: 10.1111/mec.13943] [Citation(s) in RCA: 22] [Impact Index Per Article: 3.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2016] [Revised: 10/01/2016] [Accepted: 11/16/2016] [Indexed: 01/01/2023]
Affiliation(s)
- Francine Kershaw
- Columbia University; 116th Street and Broadway New York NY 10027 USA
| | - Inês Carvalho
- Population and Conservation Genetics Group; Instituto Gulbenkian de Ciência; Rua da Quinta Grande, 6 2780-156 Oeiras Portugal
- Centre for Environmental and Marine Studies (CESAM); Universidade de Aveiro; Campus Universitário de Santiago 3810-193 Aveiro Portugal
| | - Jacqueline Loo
- Department of Biology; New York University; 100 Washington Square New York NY 10012 USA
| | - Cristina Pomilla
- Wellcome Trust Sanger Institute; Wellcome Trust Genome Campus Hinxton Cambridge CB10 1SA UK
| | - Peter B. Best
- Mammal Research Institute; University of Pretoria; c/o Iziko South African Museum, P.O. Box 61 Cape Town 8000 South Africa
| | - Ken P. Findlay
- Mammal Research Institute; University of Pretoria; c/o Iziko South African Museum, P.O. Box 61 Cape Town 8000 South Africa
| | - Salvatore Cerchio
- Wildlife Conservation Society; Ocean Giants Program; 2300 Southern Blvd. Bronx NY 10460-1099 USA
| | - Tim Collins
- Wildlife Conservation Society; Ocean Giants Program; 2300 Southern Blvd. Bronx NY 10460-1099 USA
- Environment Society of Oman; P.O. Box 3955 PC 112 Ruwi Sultanate of Oman
| | - Marcia H. Engel
- Humpback Whale Project/Humpback Whale Institute; Rua Barão do Rio Branco, 125 Caravelas Bahia Brazil
| | - Gianna Minton
- Environment Society of Oman; P.O. Box 3955 PC 112 Ruwi Sultanate of Oman
| | - Peter Ersts
- Center for Biodiversity and Conservation; American Museum of Natural History; Central Park West at 79th Street New York NY 10024 USA
| | - Jaco Barendse
- Mammal Research Institute; University of Pretoria; c/o Iziko South African Museum, P.O. Box 61 Cape Town 8000 South Africa
| | - P. G. H. Kotze
- Department of Environmental Affairs; Branch Oceans and Coasts; Private Bag x2, Roggebaai 8012 Cape Town South Africa
| | - Yvette Razafindrakoto
- Wildlife Conservation Society-Madagascar Program; 2300 Southern Blvd. Bronx NY 10460-1099 USA
| | - Solange Ngouessono
- Agence Nationale des Parcs Nationaux; Batterie 4 BP 20379 Libreville Gabon
| | - Michael Meÿer
- Department of Environmental Affairs; Branch Oceans and Coasts; Private Bag x2, Roggebaai 8012 Cape Town South Africa
| | - Meredith Thornton
- Mammal Research Institute; University of Pretoria; c/o Iziko South African Museum, P.O. Box 61 Cape Town 8000 South Africa
| | - Howard C. Rosenbaum
- Wildlife Conservation Society; Ocean Giants Program; 2300 Southern Blvd. Bronx NY 10460-1099 USA
- Sackler Institute for Comparative Genomics; American Museum of Natural History; Central Park West at 79th Street New York NY 10024 USA
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Bortolotto GA, Danilewicz D, Andriolo A, Secchi ER, Zerbini AN. Whale, Whale, Everywhere: Increasing Abundance of Western South Atlantic Humpback Whales (Megaptera novaeangliae) in Their Wintering Grounds. PLoS One 2016; 11:e0164596. [PMID: 27736958 PMCID: PMC5063365 DOI: 10.1371/journal.pone.0164596] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2016] [Accepted: 09/27/2016] [Indexed: 11/18/2022] Open
Abstract
The western South Atlantic (WSA) humpback whale population inhabits the coast of Brazil during the breeding and calving season in winter and spring. This population was depleted to near extinction by whaling in the mid-twentieth century. Despite recent signs of recovery, increasing coastal and offshore development pose potential threats to these animals. Therefore, continuous monitoring is needed to assess population status and support conservation strategies. The aim of this work was to present ship-based line-transect estimates of abundance for humpback whales in their WSA breeding ground and to investigate potential changes in population size. Two cruises surveyed the coast of Brazil during August-September in 2008 and 2012. The area surveyed in 2008 corresponded to the currently recognized population breeding area; effort in 2012 was limited due to unfavorable weather conditions. WSA humpback whale population size in 2008 was estimated at 16,410 (CV = 0.228, 95% CI = 10,563-25,495) animals. In order to compare abundance between 2008 and 2012, estimates for the area between Salvador and Cabo Frio, which were consistently covered in the two years, were computed at 15,332 (CV = 0.243, 95% CI = 9,595-24,500) and 19,429 (CV = 0.101, 95% CI = 15,958-23,654) whales, respectively. The difference in the two estimates represents an increase of 26.7% in whale numbers in a 4-year period. The estimated abundance for 2008 is considered the most robust for the WSA humpback whale population because the ship survey conducted in that year minimized bias from various sources. Results presented here indicate that in 2008, the WSA humpback whale population was at least around 60% of its estimated pre-modern whaling abundance and that it may recover to its pre-exploitation size sooner than previously estimated.
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Affiliation(s)
- Guilherme A. Bortolotto
- Pós-graduação em Zoologia, Universidade Estadual de Santa Cruz, Ilhéus, BA, 45662–900, Brasil
- Instituto Aqualie, Av. Dr. Paulo Japiassu Coelho, 714, Sala 202, Juiz de Fora, MG, 36033–310, Brasil
- Sea Mammal Research Unit–SMRU, Scottish Oceans Institute, University of St Andrews, St Andrews, Fife, KY16 8LB, United Kingdom
- * E-mail:
| | - Daniel Danilewicz
- Pós-graduação em Zoologia, Universidade Estadual de Santa Cruz, Ilhéus, BA, 45662–900, Brasil
- Instituto Aqualie, Av. Dr. Paulo Japiassu Coelho, 714, Sala 202, Juiz de Fora, MG, 36033–310, Brasil
- Grupo de Estudos de Mamíferos Aquáticos do Rio Grande do Sul–GEMARS, Av. Tramandaí, 976, Imbé, RS, 95625–000, Brasil
| | - Artur Andriolo
- Instituto Aqualie, Av. Dr. Paulo Japiassu Coelho, 714, Sala 202, Juiz de Fora, MG, 36033–310, Brasil
- Laboratório de Ecologia Comportamental e Bioacústica–LABEC, Departamento de Zoologia, Instituto de Ciências Biológicas, Universidade Federal de Juiz de Fora, R. José Lourenço Kelmer, Juiz de Fora, MG, 36036–900, Brasil
| | - Eduardo R. Secchi
- Laboratório de Ecologia e Conservação da Megafauna Marinha–EcoMega, Instituto de Oceanografia, Universidade Federal do Rio Grande, Av. Itália, km 8, Rio Grande, RS, 96203–900, Brasil
| | - Alexandre N. Zerbini
- Instituto Aqualie, Av. Dr. Paulo Japiassu Coelho, 714, Sala 202, Juiz de Fora, MG, 36033–310, Brasil
- Marine Mammal Laboratory, Alaska Fisheries Science Center, NOAA Fisheries, 7600 Sand Point Way NE, Seattle, WA, 98115–6349, United States of America
- Cascadia Research Collective, 218 ½ 4 Ave W, Olympia, WA, 98501, United States of America
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Geijer CK, Notarbartolo di Sciara G, Panigada S. Mysticete migration revisited: are Mediterranean fin whales an anomaly? Mamm Rev 2016. [DOI: 10.1111/mam.12069] [Citation(s) in RCA: 53] [Impact Index Per Article: 6.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
Affiliation(s)
- Christina K.A. Geijer
- Department of Geography; University College London; Pearson Building Gower Street London WC1E 6BT UK
- Department of Zoology; Stockholm University; Svante Arrhenius väg 18 114 18 Stockholm Sweden
| | | | - Simone Panigada
- Tethys Research Institute; Viale G.B. Gadio 2 20121 Milan Italy
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Spaet JLY, Jabado RW, Henderson AC, Moore ABM, Berumen ML. Population genetics of four heavily exploited shark species around the Arabian Peninsula. Ecol Evol 2015; 5:2317-32. [PMID: 26120422 PMCID: PMC4475365 DOI: 10.1002/ece3.1515] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2015] [Revised: 04/22/2015] [Accepted: 04/23/2015] [Indexed: 01/31/2023] Open
Abstract
The northwestern Indian Ocean harbors a number of larger marine vertebrate taxa that warrant the investigation of genetic population structure given remarkable spatial heterogeneity in biological characteristics such as distribution, behavior, and morphology. Here, we investigate the genetic population structure of four commercially exploited shark species with different biological characteristics (Carcharhinus limbatus, Carcharhinus sorrah, Rhizoprionodon acutus, and Sphyrna lewini) between the Red Sea and all other water bodies surrounding the Arabian Peninsula. To assess intraspecific patterns of connectivity, we constructed statistical parsimony networks among haplotypes and estimated (1) population structure; and (2) time of most recent population expansion, based on mitochondrial control region DNA and a total of 20 microsatellites. Our analysis indicates that, even in smaller, less vagile shark species, there are no contemporary barriers to gene flow across the study region, while historical events, for example, Pleistocene glacial cycles, may have affected connectivity in C. sorrah and R. acutus. A parsimony network analysis provided evidence that Arabian S. lewini may represent a population segment that is distinct from other known stocks in the Indian Ocean, raising a new layer of conservation concern. Our results call for urgent regional cooperation to ensure the sustainable exploitation of sharks in the Arabian region.
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Affiliation(s)
- Julia L Y Spaet
- Red Sea Research Center, Division of Biological and Environmental Science and Engineering, King Abdullah University of Science and Technology23955-6900, Thuwal, Saudi Arabia
| | - Rima W Jabado
- Gulf Elasmo ProjectP.O. Box 29588, Dubai, United Arab Emirates
| | - Aaron C Henderson
- Department of Marine Science & Fisheries, College of Agricultural & Marine Sciences, Sultan Qaboos UniversityMuscat, Oman
| | - Alec B M Moore
- RSK Environment Ltd, Spring LodgeHelsby, Cheshire, WA6 0AR, UK
| | - Michael L Berumen
- Red Sea Research Center, Division of Biological and Environmental Science and Engineering, King Abdullah University of Science and Technology23955-6900, Thuwal, Saudi Arabia
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