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Hernández-Sánchez B, Santacruz-Juárez E, Figueroa-Martínez F, Castañeda-Antonio D, Portillo-Reyes R, Viniegra-González G, Sánchez C. A novel and efficient strategy for the biodegradation of di(2-ethylhexyl) phthalate by Fusarium culmorum. Appl Microbiol Biotechnol 2024; 108:94. [PMID: 38212966 DOI: 10.1007/s00253-023-12961-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2023] [Revised: 11/24/2023] [Accepted: 12/01/2023] [Indexed: 01/13/2024]
Abstract
Di(2-ethylhexyl) phthalate (DEHP) is a plasticizer that is used worldwide and raises concerns because of its prevalence in the environment and potential toxicity. Herein, the capability of Fusarium culmorum to degrade a high concentration (3 g/L) of DEHP as the sole carbon and energy source in solid-state fermentation (SSF) was studied. Cultures grown on glucose were used as controls. The biodegradation of DEHP by F. culmorum reached 96.9% within 312 h. This fungus produced a 3-fold higher esterase activity in DEHP-supplemented cultures than in control cultures (1288.9 and 443.2 U/L, respectively). In DEHP-supplemented cultures, nine bands with esterase activity (24.6, 31.2, 34.2, 39.5, 42.8, 62.1, 74.5, 134.5, and 214.5 kDa) were observed by zymography, which were different from those in control cultures and from those previously reported for cultures grown in submerged fermentation. This is the first study to report the DEHP biodegradation pathway by a microorganism grown in SSF. The study findings uncovered a novel biodegradation strategy by which high concentrations of DEHP could be biodegraded using two alternative pathways simultaneously. F. culmorum has an outstanding capability to efficiently degrade DEHP by inducing esterase production, representing an ecologically promising alternative for the development of environmental biotechnologies, which might help mitigate the negative impacts of environmental contamination by this phthalate. KEY POINTS: • F. culmorum has potential to tolerate and remove di(2-ethylhexyl) phthalate (DEHP) • Solid-state fermentation is an efficient system for DEHP degradation by F. culmorum • High concentrations of DEHP induce high levels of esterase production by F. culmorum.
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Affiliation(s)
- Brenda Hernández-Sánchez
- PhD program in Biotechnology, Universidad Autónoma Metropolitana-Iztapalapa, 09340, Iztapalapa, CDMX, Mexico
| | - Ericka Santacruz-Juárez
- Polytechnic University of Tlaxcala, San Pedro Xalcatzinco, 90180, Tepeyanco, Tlaxcala, Mexico
| | | | - Dolores Castañeda-Antonio
- Research Centre for Microbiological Sciences, Institute of Sciences, Meritorious Autonomous University of Puebla, 72590, Puebla, Puebla, Mexico
| | - Roberto Portillo-Reyes
- Faculty of Chemical Sciences, Meritorious Autonomous University of Puebla, 72570, Puebla, Puebla, Mexico
| | - Gustavo Viniegra-González
- Department of Biotechnology, Universidad Autónoma Metropolitana-Iztapalapa, 09340, Iztapalapa, CDMX, Mexico
| | - Carmen Sánchez
- Laboratory of Biotechnology, Research Centre for Biological Sciences, Universidad Autónoma de Tlaxcala, 90120, Ixtacuixtla, Tlaxcala, Mexico.
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Ningthoujam R, Pinyakong O. Exploring di (2-ethylhexyl) phthalate degradation by a synthetic marine bacterial consortium: Genomic insights, pathway and interaction prediction, and application in sediment microcosms. JOURNAL OF HAZARDOUS MATERIALS 2024; 472:134557. [PMID: 38735188 DOI: 10.1016/j.jhazmat.2024.134557] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2024] [Revised: 05/01/2024] [Accepted: 05/04/2024] [Indexed: 05/14/2024]
Abstract
Di (2-ethylhexyl) phthalate (DEHP), a toxic phthalate ester (PAE) plasticizer, is often detected in marine sediment and biota. Our understanding of DEHP-degrading marine bacteria and the associated genetic mechanisms is limited. This study established a synthetic bacterial consortium (A02) consisting of three marine bacteria (OR05, OR16, and OR21). Consortium A02 outperformed the individual strains in DEHP degradation. Investigations into the degradation of DEHP intermediates revealed that OR05 and OR16 likely contributed to enhanced DEHP degradation by Consortium A02 via the utilization of DEHP intermediates, such as protocatechuic acid and mono (ethylhexyl) phthalate, with OR21 as the key DEHP degrader. A pathway of DEHP degradation by Consortium A02 was predicted based on genome analysis and experimental degradation. Bioaugmentation with Consortium A02 led to 80% DEHP degradation in 26 days in saline sediment (100 mg/kg), surpassing the 53% degradation by indigenous microbes, indicating the potential of A02 for treating DEHP-contaminated sediments. Meanwhile, bioaugmentation notably changed the bacterial community, with the exclusive presence of certain bacterial genera in the A02 bioaugmented microcosms, and was predicted to result in a more dynamic and active sediment bacterial community. This study contributes to the limited literature on DEHP degradation by marine bacteria and their associated genes.
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Affiliation(s)
- Ritu Ningthoujam
- International Program in Hazardous Substance and Environmental Management, Graduate School, Chulalongkorn University, Bangkok, Thailand
| | - Onruthai Pinyakong
- Center of Excellence in Microbial Technology for Marine Pollution Treatment (MiTMaPT), Department of Microbiology, Faculty of Science, Chulalongkorn University, Bangkok, Thailand; Research Program on Remediation Technologies for Petroleum Contamination, Center of Excellence on Hazardous Substance Management (HSM), Chulalongkorn University, Bangkok, Thailand.
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Zheng J, Mittal K, Fobil JN, Basu N, Bayen S. Simultaneous targeted and non-targeted analysis of plastic-related contaminants in e-waste impacted soil in Agbogbloshie, Ghana. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 917:170219. [PMID: 38266721 DOI: 10.1016/j.scitotenv.2024.170219] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2023] [Revised: 12/19/2023] [Accepted: 01/14/2024] [Indexed: 01/26/2024]
Abstract
An LC-MS based analytical method was developed and validated for the simultaneous targeted analysis and suspect screening of plastic-related contaminants in e-waste impacted soils. Satisfactory recoveries (97 ± 13 %) were achieved using ultrasound-assisted extraction for 14/15 of the targeted analytes (7 bisphenols and 8 plasticizers) in a range of agricultural and non-agricultural soils. The method was applied to 53 soil samples collected in May 2015 in the region of Agbogbloshie (Ghana) at e-waste facilities (incl. Dump, trade, and burn sites), neighboring non-agricultural (incl. upstream, downstream, and community) and agricultural fields, and at two control agricultural sites away from e-waste recycling facilities. Bisphenol A (BPA) and bis(2-ethylhexyl) phthalate (DEHP) were the two dominant contaminants in e-waste soil (with concentrations up to 48.7 and 184 μg g-1, respectively), especially at the trade site, where e-waste was sorted and dismantled. The non-targeted workflow was successfully applied to identify additional plastic-related contaminants previously unreported in e-waste impacted soils, including bis(2-propylheptyl) phthalate, diisononyl phthalate, trioctyl trimellitate, 4-dodecylbenzenesulfonic acid, perfluorooctanesulfonic acid, perfluorobutanesulfonic acid, diphenyl phosphate, and triethylene glycol monobutyl ether. The agricultural soils surrounding the e-waste sites were also contaminated by plastic-related chemicals (especially DEHP), highlighting the impact of e-waste activities on the surrounding agricultural system.
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Affiliation(s)
- Jingyun Zheng
- Department of Food Science and Agricultural Chemistry, McGill University, 21111 Lakeshore Road, Sainte-Anne-de-Bellevue, Quebec H9X3V9, Canada
| | - Krittika Mittal
- Department of Natural Resource Sciences, McGill University, 21111 Lakeshore Road, Sainte-Anne-de-Bellevue, Quebec H9X3V9, Canada
| | - Julius N Fobil
- Department of Biological, Environmental and Occupational Health Science, University of Ghana School of Public Health, Accra, Ghana; West Africa Center for Global Environmental & Occupational Health, College of Health Sciences, University of Ghana, Legon, Accra, Ghana
| | - Niladri Basu
- Department of Natural Resource Sciences, McGill University, 21111 Lakeshore Road, Sainte-Anne-de-Bellevue, Quebec H9X3V9, Canada
| | - Stéphane Bayen
- Department of Food Science and Agricultural Chemistry, McGill University, 21111 Lakeshore Road, Sainte-Anne-de-Bellevue, Quebec H9X3V9, Canada.
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Rashmi M, Singh T, Rajput NS, Kulshreshtha S. Biodegradation of di-2-ethylhexyl phthalate by Bacillus firmus MP04 strain: parametric optimization using full factorial design. Biodegradation 2023; 34:567-579. [PMID: 37354272 DOI: 10.1007/s10532-023-10043-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/01/2022] [Accepted: 05/30/2023] [Indexed: 06/26/2023]
Abstract
Di-2-ethylhexyl phthalate (DEHP) is used as a plasticizer in making plastics and released from landfills. This study attempted to degrade DEHP using microbial isolates. Isolates of Bacillus spp. were tested for their efficacy in degrading DEHP. Degradation was assessed using liquid chromatography-mass spectrometry (LC-MS). The most efficient DEHP degradation was achieved by Bacillus firmus MP04, which has been identified as Bacillus firmus MP04. This strain was found to use DEHP as the sole source of carbon without carbon source supplementation. Full factorial design was used to optimize the conditions for DEHP degradation which revealed the suitability of pH 7, 5% salt concentration, 20 to 37 °C temperature, and yeast extract as a nitrogen source. LC-MS elucidated the possible degradation mechanism via benzoic acid formation. However, prolonged incubation formed a typical compound denatonium benzoate due to reactions with other compounds. As maximum degradation was achieved in 4 days, prolonged incubation is not suggested. It can be concluded that new strain Bacillus firmus MP04 is the most efficient strain among all the tested strains for DEHP degradation.
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Affiliation(s)
- Madhavi Rashmi
- Department of Biotechnology, Magadh University, Bodh Gaya, Bihar, India
| | - Tanuja Singh
- Department of Botany, Patliputra University, Patna, Bihar, India
| | - Nitesh Singh Rajput
- Amity School of Engineering and Technology, Amity University Rajasthan, Jaipur, Rajasthan, 303007, India
| | - Shweta Kulshreshtha
- Amity Institute of Biotechnology, Amity University Rajasthan, Jaipur, Rajasthan, 303007, India.
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Dhar R, Basu S, Bhattacharyya M, Dutta TK. Evaluation of distinct molecular architectures and coordinated regulation of the catabolic pathways of oestrogenic dioctyl phthalate isomers in Gordonia sp. MICROBIOLOGY (READING, ENGLAND) 2023; 169:001353. [PMID: 37384374 PMCID: PMC10333787 DOI: 10.1099/mic.0.001353] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/05/2023] [Accepted: 06/12/2023] [Indexed: 06/30/2023]
Abstract
Bacterial strain GONU, belonging to the genus Gordonia, was isolated from a municipal waste-contaminated soil sample and was capable of utilizing an array of endocrine-disrupting phthalate diesters, including di-n-octyl phthalate (DnOP) and its isomer di(2-ethylhexyl) phthalate (DEHP), as the sole carbon and energy sources. The biochemical pathways of the degradation of DnOP and DEHP were evaluated in strain GONU by using a combination of various chromatographic, spectrometric and enzymatic analyses. Further, the upregulation of three different esterases (estG2, estG3 and estG5), a phthalic acid (PA)-metabolizing pht operon and a protocatechuic acid (PCA)-metabolizing pca operon were revealed based on de novo whole genome sequence information and substrate-induced protein profiling by LC-ESI-MS/MS analysis followed by differential gene expression by real-time PCR. Subsequently, functional characterization of the differentially upregulated esterases on the inducible hydrolytic metabolism of DnOP and DEHP revealed that EstG5 is involved in the hydrolysis of DnOP to PA, whereas EstG2 and EstG3 are involved in the metabolism of DEHP to PA. Finally, gene knockout experiments further validated the role of EstG2 and EstG5, and the present study deciphered the inducible regulation of the specific genes and operons in the assimilation of DOP isomers.
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Affiliation(s)
- Rinita Dhar
- Department of Microbiology, Bose Institute, EN-80, Sector V, Salt Lake, Kolkata – 700091, West Bengal, India
| | - Suman Basu
- Department of Microbiology, Bose Institute, EN-80, Sector V, Salt Lake, Kolkata – 700091, West Bengal, India
| | - Mousumi Bhattacharyya
- Department of Microbiology, Bose Institute, EN-80, Sector V, Salt Lake, Kolkata – 700091, West Bengal, India
| | - Tapan K. Dutta
- Department of Microbiology, Bose Institute, EN-80, Sector V, Salt Lake, Kolkata – 700091, West Bengal, India
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Ren L, Weng L, Chen D, Hu H, Jia Y, Zhou JL. Bioremediation of PAEs-contaminated saline soil: The application of a marine bacterial strain isolated from mangrove sediment. MARINE POLLUTION BULLETIN 2023; 192:115071. [PMID: 37236097 DOI: 10.1016/j.marpolbul.2023.115071] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/15/2022] [Revised: 04/10/2023] [Accepted: 05/13/2023] [Indexed: 05/28/2023]
Abstract
Phthalic acid esters (PAEs) are known as the most widely used plasticizer as well as one of the ubiquitously distributed emerging pollutants. Biodegradation and bioremediation via application of PAEs-degrading microbes is promising. In this study, a novel marine microbe, Gordonia hongkongensis RL-LY01, was isolated from mangrove sediment showing high di-(2-ethylhexyl) phthalate (DEHP) degradation capacity. Strain RL-LY01 could degrade a wide range of PAEs and the degradation kinetics of DEHP followed the first-order decay model. Meanwhile, good environmental adaptability, preference to alkaline conditions and good tolerance to salinity and metal ions was shown. Further, metabolic pathway of DEHP in strain RL-LY01 was proposed, with di-ethyl phthalate, phthalic acid, benzoic acid and catechol as intermediates. Additionally, one known mono-alkyl phthalate hydrolase gene (mehpH) was identified. Finally, the excellent performance during bioremediation of artificial DEHP-contaminated saline soil and sediment indicated strain RL-LY01 employs great application potential for the bioremediation of PAE-contaminated environments.
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Affiliation(s)
- Lei Ren
- College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang 524088, China
| | - Liyun Weng
- College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang 524088, China
| | - Danni Chen
- College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang 524088, China
| | - Hanqiao Hu
- College of Coastal Agricultural Sciences, Guangdong Ocean University, Zhanjiang 524088, China
| | - Yang Jia
- National and Local Joint Engineering Research Center of Ecological Treatment Technology for Urban Water Pollution, Zhejiang Provincial Key Lab for Subtropical Water Environment and Marine Biological Resources Protection, Wenzhou University, Wenzhou 325035, China.
| | - John L Zhou
- Centre for Green Technology, University of Technology Sydney, 15 Broadway, NSW 2007, Australia
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7
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Microbiome engineering for bioremediation of emerging pollutants. Bioprocess Biosyst Eng 2023; 46:323-339. [PMID: 36029349 DOI: 10.1007/s00449-022-02777-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/12/2022] [Accepted: 08/12/2022] [Indexed: 11/02/2022]
Abstract
Axenic microbial applications in the open environment are unrealistic and may not be always practically viable. Therefore, it is important to use mixed microbial cultures and their interactions with the microbiome in the targeted ecosystem to perform robust functions towards their sustainability in harsh environmental conditions. Emerging pollutants like phthalates and hydrocarbons that are toxic to several aquatic and terrestrial life forms in the water bodies and lands are an alarming situation. The present review explores the possibility of devising an inclusive eco-friendly strategy like microbiome engineering which proves to be a unique and crucial technology involving the power of microbial communication through quorum sensing. This review discusses the interspecies and intra-species communications between different microbial groups with their respective environments. Moreover, this review also envisages the efforts for designing the next level of microbiome-host engineering concept (MHEC). The focus of the review also extended toward using omics and metabolic network analysis-based tools for effective microbiome engineering. These approaches might be quite helpful in the future to understand such microbial interactions but it will be challenging to implement in the real environment to get the desired functions. Finally, the review also discusses multiple approaches for the bioremediation of toxic chemicals from the soil environment.
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Hsu YS, Liu YH, Lin CH, Tsai CH, Wu WF. Dual bio-degradative pathways of di-2-ethylhexyl phthalate by a novel bacterium Burkholderia sp. SP4. World J Microbiol Biotechnol 2023; 39:44. [DOI: 10.1007/s11274-022-03490-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2022] [Accepted: 12/08/2022] [Indexed: 12/23/2022]
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Mondal T, Mondal S, Ghosh SK, Pal P, Soren T, Pandey S, Maiti TK. Phthalates - A family of plasticizers, their health risks, phytotoxic effects, and microbial bioaugmentation approaches. ENVIRONMENTAL RESEARCH 2022; 214:114059. [PMID: 35961545 DOI: 10.1016/j.envres.2022.114059] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/19/2022] [Revised: 07/18/2022] [Accepted: 08/03/2022] [Indexed: 06/15/2023]
Abstract
Phthalates are a family of reprotoxicant compounds, predominantly used as a plasticizer to improve the flexibility and longevity of consumable plastic goods. After their use these plastic products find their way to the waste disposal sites where they leach out the hazardous phthalates present within them, into the surrounding environment, contaminating soil, groundwater resources, and the nearby water bodies. Subsequently, phthalates move into the living system through the food chain and exhibit the well-known phenomenon of biological magnification. Phthalates as a primary pollutant have been classified as 1B reprotoxicants and teratogens by different government authorities and they have thus imposed restrictions on their use. Nevertheless, the release of these compounds in the environment is unabated. Bioremediation has been suggested as one of the ways of mitigating this menace, but studies regarding the field applications of phthalate utilizing microbes for this purpose are limited. Through this review, we endeavor to make a deeper understanding of the cause and concern of the problem and to find out a possible solution to it. The review critically emphasizes the various aspects of phthalates toxicity, including their chemical nature, human health risks, phytoaccumulation and entry into the food chain, microbial role in phthalate degradation processes, and future challenges.
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Affiliation(s)
- Tanushree Mondal
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Golapbag, Purba Bardhaman, P. O. -Rajbati, 713104, West Bengal, India.
| | - Sayanta Mondal
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Golapbag, Purba Bardhaman, P. O. -Rajbati, 713104, West Bengal, India.
| | - Sudip Kumar Ghosh
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Golapbag, Purba Bardhaman, P. O. -Rajbati, 713104, West Bengal, India.
| | - Priyanka Pal
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Golapbag, Purba Bardhaman, P. O. -Rajbati, 713104, West Bengal, India.
| | - Tithi Soren
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Golapbag, Purba Bardhaman, P. O. -Rajbati, 713104, West Bengal, India.
| | - Sanjeev Pandey
- Department of Botany, Banwarilal Bhalotia College, Asansol, 713303, West Bengal, India.
| | - Tushar Kanti Maiti
- Microbiology Laboratory, Department of Botany, The University of Burdwan, Golapbag, Purba Bardhaman, P. O. -Rajbati, 713104, West Bengal, India.
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Insights into the Titania (TiO2) Photocatalysis on the Removal of Phthalic Acid Esters (PAEs) in Water. BULLETIN OF CHEMICAL REACTION ENGINEERING & CATALYSIS 2022. [DOI: 10.9767/bcrec.17.3.15385.608-626] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
In this era of globalization, plastic is regarded as one of the most versatile innovations, finding its uses ranging from packaging, automotive, agriculture, and construction to the medical and pharmaceutical industries. Unfortunately, the single-use nature of plastics leads to ecological and environmental problems. Among conventional disposal management of plastic waste are landfilling dumping, incineration, and recycling. However, not all plastic waste goes into disposal management and ends up accumulating in lakes, rivers, and seas. In the aquatic environment, the action of photochemical weathering plastics has resulted in the release of chemical additives such as phthalic acid esters (PAEs), an important plasticizer added to plastic products to improve their softness, flexibility, and durability. Nowadays, PAEs have been ubiquitously detected in our environment and numerous organisms are exposed to PAEs to some extent. As PAEs carry endocrine disruptive and carcinogenicity properties, an urgent search for the development of an efficient and effective method to remove PAEs from the environment is needed. As a viable option, titania (TiO2) photocatalysis is a promising tool to combat the PAEs contamination in our environment owing to its high photocatalytic activity, cost-effectiveness, and its ability to totally mineralize PAEs into carbon dioxide and water. Hence, this paper aims to highlight the concerning issue of the contamination of PAEs in our aquatic environments and the summary of the removal of PAEs by TiO2 photocatalysis. This review concerning the significance of knowledge on environmental PAEs would hopefully spark huge interest and future development to tackle this plastic-associated pollutant. Copyright © 2022 by Authors, Published by BCREC Group. This is an open access article under the CC BY-SA License (https://creativecommons.org/licenses/by-sa/4.0).
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Lv L, Qiu K, Ge S, Jiao Z, Gao C, Fu H, Su R, Liu Z, Wang Y, Wang Y. Neutralization and Improvement of Bauxite Residue by Saline-Alkali Tolerant Bacteria. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 2022; 19:11590. [PMID: 36141868 PMCID: PMC9517105 DOI: 10.3390/ijerph191811590] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 08/10/2022] [Revised: 09/08/2022] [Accepted: 09/09/2022] [Indexed: 06/16/2023]
Abstract
The high salt-alkalinity of bauxite residue (BR) hinders plant growth and revegetation of bauxite residue disposal areas (BRDA), which cause serious potential environmental and ecological risks. Bioneutralization is a promising method for improving the properties of BR and plant colonization. In the present study, a strong saline-alkali tolerant bacteria (ZH-1) was isolated from aged BR and identified as Bacillus sp. The medium of ZH-1 was optimized by orthogonal tests, and ZH-1 could decrease the medium pH from 11.8 to 6.01 (agitated culture) and 6.48 (static culture) by secretion of citric acid, oxalic acid and tartaric acid. With the inoculation of ZH-1, the pH of BR decreased from 11.6 to 8.76, and the water-soluble salt in BR increased by 68.11%. ZH-1 also changed the aggregate size distribution of BR, the mechanical-stable aggregates and water-stable aggregates increased by 18.76% and 10.83%, respectively. At the same time, the stability of the aggregates obviously increased and the destruction rate decreased from 94.37% to 73.46%. In addition, the microbial biomass carbon increased from 425 to 2794 mg/kg with the inoculation of ZH-1. Bacterial community analysis revealed that Clostridia, Bacilli, Gammaproteobacteria, Betaproteobacteria and Alphaproteobacteria were the main classes in the naturalized BR, and the inoculation of ZH-1 increased the diversity of bacteria in the BR. Overall, ZH-1 has great potential for neutralization and improvement the properties of BR and may be greatly beneficial for the revegetation of BRDA.
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Affiliation(s)
- Lv Lv
- National Demonstration Center for Environmental and Planning, College of Geography and Environmental Science, Henan University, Kaifeng 475004, China
- Key Laboratory of Geospatial Technology for the Middle and Lower Yellow River Regions, Henan University, Ministry of Education, Kaifeng 475004, China
- Henan Engineering Research Center for Control & Remediation of Soil Heavy Metal Pollution, Henan University, Kaifeng 475004, China
| | - Kunyan Qiu
- Henan Key Laboratory for Monitoring and Remediation in Heavy Metal Polluted Soil, Jiyuan 459000, China
| | - Shiji Ge
- Henan Engineering Research Center for Control & Remediation of Soil Heavy Metal Pollution, Henan University, Kaifeng 475004, China
| | - Zhiqiang Jiao
- Henan Engineering Research Center for Control & Remediation of Soil Heavy Metal Pollution, Henan University, Kaifeng 475004, China
| | - Chenyang Gao
- Henan Engineering Research Center for Control & Remediation of Soil Heavy Metal Pollution, Henan University, Kaifeng 475004, China
| | - Haiguang Fu
- Henan Engineering Research Center for Control & Remediation of Soil Heavy Metal Pollution, Henan University, Kaifeng 475004, China
| | - Rongkui Su
- School of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha 410004, China
| | - Zhongkai Liu
- Zhengzhou Non-Ferrous Metals Research Institute Co., Ltd. of CHALCO, Zhengzhou 450041, China
| | - Yulong Wang
- National Demonstration Center for Environmental and Planning, College of Geography and Environmental Science, Henan University, Kaifeng 475004, China
- Key Laboratory of Geospatial Technology for the Middle and Lower Yellow River Regions, Henan University, Ministry of Education, Kaifeng 475004, China
| | - Yangyang Wang
- National Demonstration Center for Environmental and Planning, College of Geography and Environmental Science, Henan University, Kaifeng 475004, China
- Henan Engineering Research Center for Control & Remediation of Soil Heavy Metal Pollution, Henan University, Kaifeng 475004, China
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12
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Wang Y, Ren Q, Zhan W, Zheng K, Liao Q, Yang Z, Wang Y, Ruan X. Biodegradation of di-n-octyl phthalate by Gordonia sp. Lff and its application in soil. ENVIRONMENTAL TECHNOLOGY 2022; 43:2604-2611. [PMID: 33577396 DOI: 10.1080/09593330.2021.1890839] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/20/2020] [Accepted: 02/06/2021] [Indexed: 06/12/2023]
Abstract
A previous isolated Gordonia sp. (Lff) was used to degrade di-n-octyl phthalate (DOP) contamination in both aqueous solution and soil. The influence of temperature, pH, inoculum size, salt content and initial concentration of DOP on DOP degradation by Lff were analysed. The response of soil bacterial community to DOP and Lff was also analysed by Illumina MiSeq sequence method. Results showed that the optimal temperature, pH, inoculum size and salt content were 35oC, 8.0, 5% and <5%, respectively. Under the optimal condition, more than 91.25% of DOP with different initial concentrations (100-2000 mg/L) could be degraded by Lff. Kinetics analysis indicated that biodegradation of DOP by Lff could be described by first-order kinetics (R2 > 0.917) with the half-life (t1/2) changing irregularly between 0.58 and 0.83 d. In addition, Lff enhanced the removal of DOP in soil and alleviated the toxicity of DOP on soil microorganisms. Furthermore, its influence on soil bacterial community is not obvious. These results suggested that Lff was effective in remediating DOP contamination in different environments.
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Affiliation(s)
- Yangyang Wang
- National Demonstration Center for Environmental and Planning, College of Environment & Planning, Henan University, Kaifeng, People's Republic of China
- Henan Engineering Research Center for Control & Remediation of Soil Heavy Metal Pollution, Henan University, Kaifeng, People's Republic of China
| | - Qiang Ren
- National Demonstration Center for Environmental and Planning, College of Environment & Planning, Henan University, Kaifeng, People's Republic of China
- Henan Engineering Research Center for Control & Remediation of Soil Heavy Metal Pollution, Henan University, Kaifeng, People's Republic of China
| | - Wenhao Zhan
- National Key Laboratory of Human Factors Engineering, China Astronaut Research and Training Center, Beijing, People's Republic of China
| | - Kaixuan Zheng
- National Demonstration Center for Environmental and Planning, College of Environment & Planning, Henan University, Kaifeng, People's Republic of China
- Henan Engineering Research Center for Control & Remediation of Soil Heavy Metal Pollution, Henan University, Kaifeng, People's Republic of China
| | - Qi Liao
- School of Metallurgical & Environment, Central South University, Changsha, People's Republic of China
| | - Zhihui Yang
- School of Metallurgical & Environment, Central South University, Changsha, People's Republic of China
| | - Yansong Wang
- National Demonstration Center for Environmental and Planning, College of Environment & Planning, Henan University, Kaifeng, People's Republic of China
| | - Xinling Ruan
- National Demonstration Center for Environmental and Planning, College of Environment & Planning, Henan University, Kaifeng, People's Republic of China
- Henan Engineering Research Center for Control & Remediation of Soil Heavy Metal Pollution, Henan University, Kaifeng, People's Republic of China
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13
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Microbial Consortia Are Needed to Degrade Soil Pollutants. Microorganisms 2022; 10:microorganisms10020261. [PMID: 35208716 PMCID: PMC8874626 DOI: 10.3390/microorganisms10020261] [Citation(s) in RCA: 26] [Impact Index Per Article: 13.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/03/2021] [Revised: 12/30/2021] [Accepted: 01/07/2022] [Indexed: 12/10/2022] Open
Abstract
Soil pollution is one of the most serious environmental problems globally due to the weak self-purification ability, long degradation time, and high cost of cleaning soil pollution. The pollutants in the soil can be transported into the human body through water or dust, causing adverse effects on human health. The latest research has shown that the clean-up of soil pollutants through microbial consortium is a very promising method. This review provides an in-depth discussion on the efficient removal, bio-adsorption, or carbonated precipitation of organic and inorganic pollutants by the microbial consortium, including PAHs, BPS, BPF, crude oil, pyrene, DBP, DOP, TPHP, PHs, butane, DON, TC, Mn, and Cd. In view of the good degradation ability of the consortium compared to single strains, six different synergistic mechanisms and corresponding microorganisms are summarized. The microbial consortium obtains such activities through enhancing synergistic degradation, reducing the accumulation of intermediate products, generating the crude enzyme, and self-regulating, etc. Furthermore, the degradation efficiency of pollutants can be greatly improved by adding chemical materials such as the surfactants Tween 20, Tween 80, and SDS. This review provides insightful information regarding the application of microbial consortia for soil pollutant removal.
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Wang Y, Zhan W, Liu Y, Cheng S, Zhang C, Ma J, Chen R. Di- n-octyl phthalate degradation by a halotolerant bacterial consortium LF and its application in soil. ENVIRONMENTAL TECHNOLOGY 2021; 42:2749-2756. [PMID: 31961776 DOI: 10.1080/09593330.2020.1713903] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/18/2019] [Accepted: 01/04/2020] [Indexed: 06/10/2023]
Abstract
Di-n-octyl phthalate (DOP), a plasticizer used in many different industrial products, is a frequently observed pollutant in the environment. Biodegradation by microorganisms is considered to be a realistic choice for the remediation of DOP contamination. In the present research, the halotolerant bacterial consortium (LF) enriched in our previous research was used to degrade DOP. It was found that the optimal conditions for LF to degrade DOP was temperature 30oC, pH 6.0, inoculum size >5%, and salt content <3%. LF could degrade a high concentration of DOP (2000 mg/L) with the removal efficiency of 96.33%. Substrate inhibition analyses indicated that the inhibition constant, maximum specific degradation rate and half-saturation constant were 2544.6 mg/L, 0.7 d-1 and 59.1 mg/L, respectively. Based on the analysis of the gas chromatography-mass spectrometry (GC-MS), the biodegradation pathway for DOP by LF was proposed. Furthermore, LF could degrade DOP in soil (100 mg/kg) with the highest removal efficiency of 89.3%. This study is the first report on DOP biodegradation by bacterial consortium. These results suggest that LF can be used to remediate DOP-contaminated environment.
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Affiliation(s)
- Yangyang Wang
- National Demonstration Center for Environmental and Planning, College of Environment & Planning, Henan University, Kaifeng, People's Republic of China
- Key Laboratory of Geospatial Technology for the Middle and Lower Yellow River Regions (Henan University), Ministry of Education, Kaifeng, Henan, People's Republic of China
- Key Research Institute of Yellow River Civilization and Sustainable Development & Collaborative Innovation Center on Yellow River Civilization of Henan Province, Henan University, Kaifeng, People's Republic of China
| | - Wenhao Zhan
- National Key Laboratory of Human Factors Engineering, China Astronaut Research and Training Center, Beijing, People's Republic of China
| | - Yidan Liu
- National Demonstration Center for Environmental and Planning, College of Environment & Planning, Henan University, Kaifeng, People's Republic of China
| | - Shanshan Cheng
- National Demonstration Center for Environmental and Planning, College of Environment & Planning, Henan University, Kaifeng, People's Republic of China
| | - Chaosheng Zhang
- National Demonstration Center for Environmental and Planning, College of Environment & Planning, Henan University, Kaifeng, People's Republic of China
| | - Jianhua Ma
- National Demonstration Center for Environmental and Planning, College of Environment & Planning, Henan University, Kaifeng, People's Republic of China
| | - Runhua Chen
- College of Environmental Science and Engineering, Central South University of Forestry and Technology, Changsha, People's Republic of China
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15
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Pereyra-Camacho MA, Balderas-Hernández VE, De Leon-Rodriguez A. Biodegradation of diisononyl phthalate by a consortium of saline soil bacteria: optimisation and kinetic characterisation. Appl Microbiol Biotechnol 2021; 105:3369-3380. [PMID: 33797572 DOI: 10.1007/s00253-021-11255-5] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2020] [Revised: 03/17/2021] [Accepted: 03/23/2021] [Indexed: 12/14/2022]
Abstract
Diisononyl phthalate (DINP) is one of plasticisers most employed in the production of plastic materials and belongs to the most important environmental contaminants. In this work, a consortium of saline soil bacterial (SSB) capable of degrading DINP is presented. The genera of SSB-consortium were Serratia sp., Methylobacillus sp., Achromobacter sp., Pseudomonas sp., Stenotrophomonas sp., Methyloversatilis sp., Delftia sp. and Brevundimonas sp. Response surface methodology (RSM) study was employed to optimise and evaluate the culture conditions to improve the biodegradation of DINP. The optimal conditions were a pH 7.0, 31 °C and an initial DINP concentration of 500 mg L-1, resulting in almost complete biodegradation (99%) in 168 h. DINP degradation followed a first-order kinetic model, and the half-life was 12.76 h. During the biodegradation of DINP, 4-derived compounds were identified: monoisononyl phthalate, methyl nonyl phthalate, iso-nonanol and dimethyl phthalate. The metabolite profiling indicated that DINP was degraded through simultaneous pathways of de-esterification and β-oxidation. Results suggest that the SSB-consortium could be useful for efficient biodegradation of the DINP-contaminated environments. KEY POINTS: • DINP degradation is mediated by de-esterification and β-oxidation processes. • Temperature and the concentration of the substrate are key factors for DINP biodegradation • The SSB-consortium has the ability to biodegrade 99% of DINP (500 mg L-1).
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Affiliation(s)
- Marco A Pereyra-Camacho
- IPICyT, Instituto Potosino de Investigación Científica y Tecnológica A.C., Camino a la Presa San José No. 2055, Lomas 4a sección, San Luis Potosí, San Luis Potosí, 78216, México
| | - Victor E Balderas-Hernández
- IPICyT, Instituto Potosino de Investigación Científica y Tecnológica A.C., Camino a la Presa San José No. 2055, Lomas 4a sección, San Luis Potosí, San Luis Potosí, 78216, México
| | - Antonio De Leon-Rodriguez
- IPICyT, Instituto Potosino de Investigación Científica y Tecnológica A.C., Camino a la Presa San José No. 2055, Lomas 4a sección, San Luis Potosí, San Luis Potosí, 78216, México.
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16
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Carmen S. Microbial capability for the degradation of chemical additives present in petroleum-based plastic products: A review on current status and perspectives. JOURNAL OF HAZARDOUS MATERIALS 2021; 402:123534. [PMID: 33254737 DOI: 10.1016/j.jhazmat.2020.123534] [Citation(s) in RCA: 37] [Impact Index Per Article: 12.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/28/2020] [Revised: 07/16/2020] [Accepted: 07/19/2020] [Indexed: 06/12/2023]
Abstract
Plastic additives are present as pollutants in the environment because they are released from plastics and have been reported to be toxic to mammals. Due to this toxicity, it is crucial to develop ecofriendly tools to decontaminate the environment. Microorganisms are a promising alternative for efficient and effective plastic additive removal. This review describes the current knowledge and significant advances in the microbial degradation of plastic additives (i.e. plasticizers, flame retardants, stabilizers and antioxidants) and biotechnological research strategies that are being used to accelerate the biodegradation process of these additives. It is expected that further research supported by advances in genomics, proteomics, gene expression, enzyme immobilization, protein design, and nanotechnology can substantially increase our knowledge to enhance the enzymatic degradation efficiency, which will accelerate plastic additive degradation and establish successful and cost-effective bioremediation processes. Investigations should also address the identification of the enzymes involved in the degradation process and their catalytic mechanisms to achieve full metabolization of organopollutants (i.e. plastic additives) while avoiding harmful plastic additive biodegradation products. Microorganisms and their enzymes undoubtedly represent a potential resource for developing promising environmental biotechnologies, as they have the best systems for pollutant degradation, and their actions are essential for decontaminating the environment.
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Affiliation(s)
- Sánchez Carmen
- Laboratory of Biotechnology, Research Centre for Biological Sciences, Universidad Autónoma de Tlaxcala, Ixtacuixtla, C.P.90120, Tlaxcala, Mexico.
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Complete Genome Sequence of Gordonia rubripertincta SD5, a Soil Bacterium Isolated from a Di-(2-Ethylhexyl) Phthalate-Degrading Enrichment Culture. Microbiol Resour Announc 2020; 9:9/45/e01087-20. [PMID: 33154014 PMCID: PMC7645669 DOI: 10.1128/mra.01087-20] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022] Open
Abstract
We report the complete genome sequence of Gordonia rubripertincta SD5, isolated from a soil-derived di-(2-ethylhexyl) phthalate-degrading enrichment culture. The final genome assembly consists of a 5.10-Mbp chromosome and a plasmid (159 kbp). A total of 4,814 coding sequences were predicted, including 4,741 protein-coding sequences. We report the complete genome sequence of Gordonia rubripertincta SD5, isolated from a soil-derived di-(2-ethylhexyl) phthalate-degrading enrichment culture. The final genome assembly consists of a 5.10-Mbp chromosome and a plasmid (159 kbp). A total of 4,814 coding sequences were predicted, including 4,741 protein-coding sequences.
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18
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Biodegradation of recalcitrant compounds and phthalates by culturable bacteria isolated from Liometopum apiculatum microbiota. World J Microbiol Biotechnol 2020; 36:73. [PMID: 32385754 DOI: 10.1007/s11274-020-02850-1] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/06/2019] [Accepted: 05/04/2020] [Indexed: 10/24/2022]
Abstract
Liometopum apiculatum is a species of ants widely distributed in arid and semi-arid ecosystems where there is a relative food shortage compared with tropical ecosystems. L. apiculatum has established an ecological balance involving symbiotic interactions, which have allowed them to survive through mechanisms that are still unknown. Therefore, the aim of this study was to explore the metabolic potential of isolated bacteria from L. apiculatum using enzymatic activity assay and substrate assimilation. Results revealed a complex bacteria consortium belonging to Proteobacteria, Firmicutes, and Actinobacteria phylum. Most of the isolated bacteria showed activities associated with biopolymers degradation, from them Exiguobacterium and B. simplex showed the highest amylolytic activity (27 U/mg protein), while A. johnsonii and B. pumulis showed the highest cellulolytic and xylanolytic activities (1 and 2.9 U/mg protein, respectively). By other hand, some microorganisms such as S. ficaria, E. asburiae, P. agglomerans, A. johnsonii, S. rubidaea, S. marcescens, S. warneri, and M. hydrocarbonoxydans were able to grow up to 1000 mg/L of phthalates esters. These results not only revealed the important contribution of the symbionts in L apiculatum ants feeding habits, but also have shown a promising source of enzymes with potential biotechnological applications such as lignocellulosic biomass hydrolysis and bioremediation processes.
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Wright RJ, Bosch R, Gibson MI, Christie-Oleza JA. Plasticizer Degradation by Marine Bacterial Isolates: A Proteogenomic and Metabolomic Characterization. ENVIRONMENTAL SCIENCE & TECHNOLOGY 2020; 54:2244-2256. [PMID: 31894974 PMCID: PMC7031849 DOI: 10.1021/acs.est.9b05228] [Citation(s) in RCA: 80] [Impact Index Per Article: 20.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/30/2019] [Revised: 12/30/2019] [Accepted: 01/02/2020] [Indexed: 05/19/2023]
Abstract
Many commercial plasticizers are toxic endocrine-disrupting chemicals that are added to plastics during manufacturing and may leach out once they reach the environment. Traditional phthalic acid ester plasticizers (PAEs), such as dibutyl phthalate (DBP) and bis(2-ethyl hexyl) phthalate (DEHP), are now increasingly being replaced with more environmentally friendly alternatives, such as acetyl tributyl citrate (ATBC). While the metabolic pathways for PAE degradation have been established in the terrestrial environment, to our knowledge, the mechanisms for ATBC biodegradation have not been identified previously and plasticizer degradation in the marine environment remains underexplored. From marine plastic debris, we enriched and isolated microbes able to grow using a range of plasticizers and, for the first time, identified the pathways used by two phylogenetically distinct bacteria to degrade three different plasticizers (i.e., DBP, DEHP, and ATBC) via a comprehensive proteogenomic and metabolomic approach. This integrated multi-OMIC study also revealed the different mechanisms used for ester side-chain removal from the different plasticizers (esterases and enzymes involved in the β-oxidation pathway) as well as the molecular response to deal with toxic intermediates, that is, phthalate, and the lower biodegrading potential detected for ATBC than for PAE plasticizers. This study highlights the metabolic potential that exists in the biofilms that colonize plastics-the Plastisphere-to effectively biodegrade plastic additives and flags the inherent importance of microbes in reducing plastic toxicity in the environment.
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Affiliation(s)
- Robyn J. Wright
- School of Life Sciences, University of Warwick, Coventry CV4 7AL, U.K.
- School for Resource and Environmental Studies, Dalhousie University, Halifax B3H 4R2, Canada
- E-mail: (R.J.W.)
| | - Rafael Bosch
- University of the Balearic Islands, Palma 07122, Spain
- IMEDEA (CSIC-UIB), Esporles 07190, Spain
| | - Matthew I. Gibson
- Department
of Chemistry, University of Warwick, Coventry CV4 7AL, U.K.
- Medical School, University
of Warwick, Coventry CV4 7AL, U.K.
| | - Joseph A. Christie-Oleza
- School of Life Sciences, University of Warwick, Coventry CV4 7AL, U.K.
- University of the Balearic Islands, Palma 07122, Spain
- IMEDEA (CSIC-UIB), Esporles 07190, Spain
- E-mail: (J.A.C.-O.)
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