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Lai D, Sosicka P, Williams DJ, Bowyer ME, Ressler AK, Kohrt SE, Muron SJ, Crino PB, Freeze HH, Boland MJ, Heinzen EL. SLC35A2 loss of function variants affect glycomic signatures, neuronal fate, and network dynamics. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.12.27.630524. [PMID: 39763953 PMCID: PMC11703275 DOI: 10.1101/2024.12.27.630524] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Indexed: 01/11/2025]
Abstract
SLC35A2 encodes a UDP-galactose transporter essential for glycosylation of proteins and galactosylation of lipids and glycosaminoglycans. Germline genetic SLC35A2 variants have been identified in congenital disorders of glycosylation and somatic SLC35A2 variants have been linked to intractable epilepsy associated with malformations of cortical development. However, the functional consequences of these pathogenic variants on brain development and network integrity remain elusive. In this study, we use an isogenic human induced pluripotent stem cell-derived neuron model to comprehensively interrogate the functional impact of loss of function variants in SLC35A2 through the integration of cellular and molecular biology, protein glycosylation analysis, neural network dynamics, and single cell electrophysiology. We show that loss of function variants in SLC35A2 result in disrupted glycomic signatures and precocious neurodevelopment, yielding hypoactive, asynchronous neural networks. This aberrant network activity is attributed to an inhibitory/excitatory imbalance as characterization of neural composition revealed preferential differentiation of SLC35A2 loss of function variants towards the GABAergic fate. Additionally, electrophysiological recordings of synaptic activity reveal a shift in excitatory/inhibitory balance towards increased inhibitory drive, indicating changes occurring specifically at the pre-synaptic terminal. Our study is the first to provide mechanistic insight regarding the early development and functional connectivity of SLC35A2 loss of function variant harboring human neurons, providing important groundwork for future exploration of potential therapeutic interventions.
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Affiliation(s)
- Dulcie Lai
- Division of Pharmacotherapy and Experimental Therapeutics, Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC, 27599, USA
- Institute for Genomic Medicine, Columbia University Irving Medical Center, New York, NY, 10032, USA
| | - Paulina Sosicka
- Human Genetics Program, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, 92037, USA
| | - Damian J Williams
- Institute for Genomic Medicine, Columbia University Irving Medical Center, New York, NY, 10032, USA
| | - MaryAnn E Bowyer
- Division of Pharmacotherapy and Experimental Therapeutics, Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC, 27599, USA
| | - Andrew K Ressler
- Institute for Genomic Medicine, Columbia University Irving Medical Center, New York, NY, 10032, USA
| | - Sarah E Kohrt
- Division of Pharmacotherapy and Experimental Therapeutics, Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC, 27599, USA
| | - Savannah J Muron
- Division of Pharmacotherapy and Experimental Therapeutics, Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC, 27599, USA
| | - Peter B Crino
- Department of Neurology, University of Maryland School of Medicine, Baltimore, MD, 21201, USA
| | - Hudson H Freeze
- Human Genetics Program, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA, 92037, USA
| | - Michael J Boland
- Institute for Genomic Medicine, Columbia University Irving Medical Center, New York, NY, 10032, USA
- Department of Neurology, Columbia University Irving Medical Center, New York, NY, 10032, USA
- Center for Epilepsy and Neurodevelopmental Disorders, Perelman School of Medicine, University of Pennsylvania, Children's Hospital of Philadelphia, Philadelphia, PA, 19104, USA
| | - Erin L Heinzen
- Division of Pharmacotherapy and Experimental Therapeutics, Eshelman School of Pharmacy, University of North Carolina, Chapel Hill, NC, 27599, USA
- Institute for Genomic Medicine, Columbia University Irving Medical Center, New York, NY, 10032, USA
- Department of Pathology and Cell Biology, Columbia University Irving Medical Center, New York, NY, 10032, USA
- Department of Genetics, School of Medicine, University of North Carolina, Chapel Hill, NC, 27599, USA
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2
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Ho C, Jutras-Dubé L, Zhao ML, Mönke G, Kiss IZ, François P, Aulehla A. Nonreciprocal synchronization in embryonic oscillator ensembles. Proc Natl Acad Sci U S A 2024; 121:e2401604121. [PMID: 39190346 PMCID: PMC11388350 DOI: 10.1073/pnas.2401604121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2024] [Accepted: 07/10/2024] [Indexed: 08/28/2024] Open
Abstract
Synchronization of coupled oscillators is a universal phenomenon encountered across different scales and contexts, e.g., chemical wave patterns, superconductors, and the unison applause we witness in concert halls. The existence of common underlying coupling rules defines universality classes, revealing a fundamental sameness between seemingly distinct systems. Identifying rules of synchronization in any particular setting is hence of paramount relevance. Here, we address the coupling rules within an embryonic oscillator ensemble linked to vertebrate embryo body axis segmentation. In vertebrates, the periodic segmentation of the body axis involves synchronized signaling oscillations in cells within the presomitic mesoderm (PSM), from which somites, the prevertebrae, form. At the molecular level, it is known that intact Notch-signaling and cell-to-cell contact are required for synchronization between PSM cells. However, an understanding of the coupling rules is still lacking. To identify these, we develop an experimental assay that enables direct quantification of synchronization dynamics within mixtures of oscillating cell ensembles, for which the initial input frequency and phase distribution are known. Our results reveal a "winner-takes-it-all" synchronization outcome, i.e., the emerging collective rhythm matches one of the input rhythms. Using a combination of theory and experimental validation, we develop a coupling model, the "Rectified Kuramoto" (ReKu) model, characterized by a phase-dependent, nonreciprocal interaction in the coupling of oscillatory cells. Such nonreciprocal synchronization rules reveal fundamental similarities between embryonic oscillators and a class of collective behaviors seen in neurons and fireflies, where higher-level computations are performed and linked to nonreciprocal synchronization.
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Affiliation(s)
- Christine Ho
- Developmental Biology Unit, European Molecular Biology Laboratory, Heidelberg 69117, Germany
| | | | - Michael L Zhao
- Developmental Biology Unit, European Molecular Biology Laboratory, Heidelberg 69117, Germany
| | - Gregor Mönke
- Developmental Biology Unit, European Molecular Biology Laboratory, Heidelberg 69117, Germany
| | - István Z Kiss
- Department of Chemistry, Saint Louis University, St. Louis, MO 63103
| | - Paul François
- Department of Physics, McGill University, Montreal, QC H3A 2T8, Canada
| | - Alexander Aulehla
- Developmental Biology Unit, European Molecular Biology Laboratory, Heidelberg 69117, Germany
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3
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Yuan AE, Shou W. A rigorous and versatile statistical test for correlations between stationary time series. PLoS Biol 2024; 22:e3002758. [PMID: 39146390 PMCID: PMC11398661 DOI: 10.1371/journal.pbio.3002758] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2023] [Revised: 09/13/2024] [Accepted: 07/17/2024] [Indexed: 08/17/2024] Open
Abstract
In disciplines from biology to climate science, a routine task is to compute a correlation between a pair of time series and determine whether the correlation is statistically significant (i.e., unlikely under the null hypothesis that the time series are independent). This problem is challenging because time series typically exhibit autocorrelation and thus cannot be properly analyzed with the standard iid-oriented statistical tests. Although there are well-known parametric tests for time series, these are designed for linear correlation statistics and thus not suitable for the increasingly popular nonlinear correlation statistics. There are also nonparametric tests that can be used with any correlation statistic, but for these, the conditions that guarantee correct false positive rates are either restrictive or unclear. Here, we describe the truncated time-shift (TTS) test, a nonparametric procedure to test for dependence between 2 time series. We prove that this test correctly controls the false positive rate as long as one of the time series is stationary, a minimally restrictive requirement among current tests. The TTS test is versatile because it can be used with any correlation statistic. Using synthetic data, we demonstrate that this test performs correctly even while other tests suffer high false positive rates. In simulation examples, simple guidelines for parameter choices allow high statistical power to be achieved with sufficient data. We apply the test to datasets from climatology, animal behavior, and microbiome science, verifying previously discovered dependence relationships and detecting additional relationships.
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Affiliation(s)
- Alex E Yuan
- Molecular and Cellular Biology PhD program, University of Washington, Seattle, Washington, United States of America
- Fred Hutchinson Cancer Center, Seattle, Washington, United States of America
| | - Wenying Shou
- Centre for Life's Origins and Evolution, Department of Genetics, Evolution and Environment, University College London, London, United Kingdom
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4
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Kamiya H. Ectopic burst induced by blockade of axonal potassium channels on the mouse hippocampal mossy fiber. Front Cell Neurosci 2024; 18:1434165. [PMID: 39026687 PMCID: PMC11256220 DOI: 10.3389/fncel.2024.1434165] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/17/2024] [Accepted: 06/25/2024] [Indexed: 07/20/2024] Open
Abstract
A potassium channel blocker 4-AP has been shown to exert pronounced convulsive action to generate burst firings when applied to hippocampal slices. However, it remains unclear how the blockade of potassium channels leads to the generation of burst firings. One possibility is ectopic spiking from the sites different from those for physiological spike initiation at the axon initial segment, as suggested for several experimental models of epileptogenesis in vitro. To test for possible ectopic spiking at the distal axon by 4-AP application, direct recordings from large mossy fiber terminals were made with the loose-patch clamp technique in mouse hippocampal slices. To localize the action of 4-AP on the distal axon, focal perfusion, as well as micro-cut to disconnect soma and distal axons, were adopted. Focal application of 4-AP on the distal portion of mossy fibers reliably induced burst discharges of the mossy fiber terminals. Photochemical blockade of potassium channels at distal axons, by the application of RuBi-4-AP, a visible wavelength blue light-sensitive caged compound, and the illumination of blue light caused robust bursting activity originating from distal axons. Computer simulation suggested that local blockade of axonal potassium channels prolongs the duration of action potentials and thereby causes reverberating spiking activities at distal axons and subsequent antidromic propagation toward the soma. Taken together, it was suggested that local blockade of voltage-dependent potassium channels in distal axons by application of 4-AP is sufficient to cause a hyperexcitable state of hippocampal mossy fiber axons.
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Affiliation(s)
- Haruyuki Kamiya
- Department of Neurobiology, Hokkaido University Graduate School of Medicine, Sapporo, Japan
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5
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Chen H, Wang YD, Blan AW, Almanza-Fuerte EP, Bonkowski ES, Bajpai R, Pruett-Miller SM, Mefford HC. Patient derived model of UBA5-associated encephalopathy identifies defects in neurodevelopment and highlights potential therapies. BIORXIV : THE PREPRINT SERVER FOR BIOLOGY 2024:2024.01.25.577254. [PMID: 38328212 PMCID: PMC10849720 DOI: 10.1101/2024.01.25.577254] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/09/2024]
Abstract
UBA5 encodes for the E1 enzyme of the UFMylation cascade, which plays an essential role in ER homeostasis. The clinical phenotypes of UBA5-associated encephalopathy include developmental delays, epilepsy and intellectual disability. To date, there is no humanized neuronal model to study the cellular and molecular consequences of UBA5 pathogenic variants. We developed and characterized patient-derived cortical organoid cultures and identified defects in GABAergic interneuron development. We demonstrated aberrant neuronal firing and microcephaly phenotypes in patient-derived organoids. Mechanistically, we show that ER homeostasis is perturbed along with exacerbated unfolded protein response pathway in cells and organoids expressing UBA5 pathogenic variants. We also assessed two gene expression modalities that augmented UBA5 expression to rescue aberrant molecular and cellular phenotypes. Our study provides a novel humanized model that allows further investigations of UBA5 variants in the brain and highlights novel systemic approaches to alleviate cellular aberrations for this rare, developmental disorder.
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Affiliation(s)
- Helen Chen
- Center for Pediatric Neurological Disease Research, St. Jude Children’s Research Hospital, Memphis, TN, USA
| | - Yong-Dong Wang
- Department of Cell and Molecular Biology, St. Jude Children’s Research Hospital, Memphis TN, USA
| | - Aidan W. Blan
- Center for Pediatric Neurological Disease Research, St. Jude Children’s Research Hospital, Memphis, TN, USA
| | - Edith P. Almanza-Fuerte
- Center for Pediatric Neurological Disease Research, St. Jude Children’s Research Hospital, Memphis, TN, USA
| | - Emily S. Bonkowski
- Center for Pediatric Neurological Disease Research, St. Jude Children’s Research Hospital, Memphis, TN, USA
| | - Richa Bajpai
- Department of Cell and Molecular Biology, St. Jude Children’s Research Hospital, Memphis TN, USA
- Center for Advanced Genome Engineering, St. Jude Children’s Research Hospital, Memphis TN, USA
| | - Shondra M. Pruett-Miller
- Department of Cell and Molecular Biology, St. Jude Children’s Research Hospital, Memphis TN, USA
- Center for Advanced Genome Engineering, St. Jude Children’s Research Hospital, Memphis TN, USA
| | - Heather C. Mefford
- Center for Pediatric Neurological Disease Research, St. Jude Children’s Research Hospital, Memphis, TN, USA
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6
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Laing CR, Omel’chenko OE. Periodic solutions in next generation neural field models. BIOLOGICAL CYBERNETICS 2023; 117:259-274. [PMID: 37535104 PMCID: PMC10600056 DOI: 10.1007/s00422-023-00969-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/24/2023] [Accepted: 07/12/2023] [Indexed: 08/04/2023]
Abstract
We consider a next generation neural field model which describes the dynamics of a network of theta neurons on a ring. For some parameters the network supports stable time-periodic solutions. Using the fact that the dynamics at each spatial location are described by a complex-valued Riccati equation we derive a self-consistency equation that such periodic solutions must satisfy. We determine the stability of these solutions, and present numerical results to illustrate the usefulness of this technique. The generality of this approach is demonstrated through its application to several other systems involving delays, two-population architecture and networks of Winfree oscillators.
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Affiliation(s)
- Carlo R. Laing
- School of Mathematical and Computational Sciences, Massey University, Private Bag 102-904 NSMC, Auckland, New Zealand
| | - Oleh E. Omel’chenko
- Institute of Physics and Astronomy, University of Potsdam, Karl-Liebknecht-Str. 24/25, 14476 Potsdam, Germany
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7
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Andrzejak RG, Espinoso A, García-Portugués E, Pewsey A, Epifanio J, Leguia MG, Schindler K. High expectations on phase locking: Better quantifying the concentration of circular data. CHAOS (WOODBURY, N.Y.) 2023; 33:091106. [PMID: 37756609 DOI: 10.1063/5.0166468] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/05/2023] [Accepted: 09/05/2023] [Indexed: 09/29/2023]
Abstract
The degree to which unimodal circular data are concentrated around the mean direction can be quantified using the mean resultant length, a measure known under many alternative names, such as the phase locking value or the Kuramoto order parameter. For maximal concentration, achieved when all of the data take the same value, the mean resultant length attains its upper bound of one. However, for a random sample drawn from the circular uniform distribution, the expected value of the mean resultant length achieves its lower bound of zero only as the sample size tends to infinity. Moreover, as the expected value of the mean resultant length depends on the sample size, bias is induced when comparing the mean resultant lengths of samples of different sizes. In order to ameliorate this problem, here, we introduce a re-normalized version of the mean resultant length. Regardless of the sample size, the re-normalized measure has an expected value that is essentially zero for a random sample from the circular uniform distribution, takes intermediate values for partially concentrated unimodal data, and attains its upper bound of one for maximal concentration. The re-normalized measure retains the simplicity of the original mean resultant length and is, therefore, easy to implement and compute. We illustrate the relevance and effectiveness of the proposed re-normalized measure for mathematical models and electroencephalographic recordings of an epileptic seizure.
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Affiliation(s)
- Ralph G Andrzejak
- Department of Information and Communication Technologies, Universitat Pompeu Fabra, Carrer Roc Boronat 138, 08018 Barcelona, Catalonia, Spain
| | - Anaïs Espinoso
- Department of Information and Communication Technologies, Universitat Pompeu Fabra, Carrer Roc Boronat 138, 08018 Barcelona, Catalonia, Spain
- Institute for Bioengineering of Catalonia (IBEC), The Barcelona Institute of Science and Technology, Carrer Baldiri Reixac 10-12, 08028 Barcelona, Catalonia, Spain
| | - Eduardo García-Portugués
- Department of Statistics, Universidad Carlos III de Madrid, Av. de la Universidad 30, 28911 Leganés, Madrid, Spain
| | - Arthur Pewsey
- Mathematics Department, Escuela Politécnica, Universidad de Extremadura, Av. de la Universidad s/n, 10003 Cáceres, Spain
| | - Jacopo Epifanio
- Department of Information and Communication Technologies, Universitat Pompeu Fabra, Carrer Roc Boronat 138, 08018 Barcelona, Catalonia, Spain
| | - Marc G Leguia
- Department of Information and Communication Technologies, Universitat Pompeu Fabra, Carrer Roc Boronat 138, 08018 Barcelona, Catalonia, Spain
| | - Kaspar Schindler
- Sleep Wake Epilepsy Center, Department of Neurology, Inselspital, Bern University Hospital, University of Bern, Bern 3010, Switzerland
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8
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Hu L, Xiong K, Ye L, Yang Y, Chen C, Wang S, Ding Y, Wang Z, Ming W, Zheng Z, Jiang H, Li H, Zhu J, Xu C, Wang Y, Ding M, Chen Z, Wu Y, Wang S. Ictal EEG desynchronization during low-voltage fast activity for prediction of surgical outcomes in focal epilepsy. J Neurosurg 2022:1-10. [PMID: 36681967 DOI: 10.3171/2022.11.jns221469] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/22/2022] [Accepted: 11/15/2022] [Indexed: 12/24/2022]
Abstract
OBJECTIVE The authors investigated alterations in functional connectivity (FC) and EEG power during ictal onset patterns of low-voltage fast activity (LVFA) in drug-resistant focal epilepsy. They hypothesized that such changes would be useful to classify epilepsy surgical outcomes. METHODS In a cohort of 79 patients with drug-resistant focal epilepsy who underwent stereoelectroencephalography (SEEG) evaluation as well as resective surgery, FC changes during the peri-LVFA period were measured using nonlinear regression (h2) and power spectral properties within/between three regions: the seizure onset zone (SOZ), early propagation zone (PZ), and noninvolved zone (NIZ). Desynchronization and power desynchronization h2 indices were calculated to assess the degree of EEG desynchronization during LVFA. Multivariate logistic regression was employed to control for confounding factors. Finally, receiver operating characteristic curves were generated to evaluate the performance of desynchronization indices in predicting surgical outcome. RESULTS Fifty-three patients showed ictal LVFA and distinct zones of the SOZ, PZ, and NIZ. Among them, 39 patients (73.6%) achieved seizure freedom by the final follow-up. EEG desynchronization, measured by h2 analysis, was found in the seizure-free group during LVFA: FC decreased within the SOZ and between regions compared with the pre-LVFA and post-LVFA periods. In contrast, the non-seizure-free group showed no prominent EEG desynchronization. The h2 desynchronization index, but not the power desynchronization index, enabled classification of seizure-free versus non-seizure-free patients after resective surgery. CONCLUSIONS EEG desynchronization during the peri-LVFA period, measured by within-zone and between-zone h2 analysis, may be helpful for identifying patients with favorable postsurgical outcomes and also may potentially improve epileptogenic zone identification in the future.
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Affiliation(s)
- Lingli Hu
- 1Department of Neurology, Epilepsy Center, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou
| | - Kai Xiong
- 2School of Computer Science and Technology, Zhejiang University, Hangzhou
| | - Lingqi Ye
- 1Department of Neurology, Epilepsy Center, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou
| | - Yuyu Yang
- 1Department of Neurology, Epilepsy Center, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou
| | - Cong Chen
- 1Department of Neurology, Epilepsy Center, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou
| | - Shan Wang
- 1Department of Neurology, Epilepsy Center, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou
| | - Yao Ding
- 1Department of Neurology, Epilepsy Center, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou
| | - Zhongjin Wang
- 1Department of Neurology, Epilepsy Center, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou
| | - Wenjie Ming
- 1Department of Neurology, Epilepsy Center, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou
| | - Zhe Zheng
- 1Department of Neurology, Epilepsy Center, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou
| | - Hongjie Jiang
- 1Department of Neurology, Epilepsy Center, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou
| | - Hong Li
- 3Department of Radiology, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou; and
| | - Junming Zhu
- 1Department of Neurology, Epilepsy Center, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou
| | - Cenglin Xu
- 4Key Laboratory of Neuropharmacology and Translational Medicine of Zhejiang Province, School of Pharmaceutical Sciences, Zhejiang Chinese Medical University, Hangzhou, China
| | - Yi Wang
- 4Key Laboratory of Neuropharmacology and Translational Medicine of Zhejiang Province, School of Pharmaceutical Sciences, Zhejiang Chinese Medical University, Hangzhou, China
| | - Meiping Ding
- 1Department of Neurology, Epilepsy Center, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou
| | - Zhong Chen
- 4Key Laboratory of Neuropharmacology and Translational Medicine of Zhejiang Province, School of Pharmaceutical Sciences, Zhejiang Chinese Medical University, Hangzhou, China
| | - Yingcai Wu
- 2School of Computer Science and Technology, Zhejiang University, Hangzhou
| | - Shuang Wang
- 1Department of Neurology, Epilepsy Center, Second Affiliated Hospital, School of Medicine, Zhejiang University, Hangzhou
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9
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Omel'chenko O, Laing CR. Collective states in a ring network of theta neurons. Proc Math Phys Eng Sci 2022; 478:20210817. [PMID: 35280327 PMCID: PMC8908473 DOI: 10.1098/rspa.2021.0817] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2021] [Accepted: 02/08/2022] [Indexed: 11/26/2022] Open
Abstract
We consider a ring network of theta neurons with non-local homogeneous coupling. We analyse the corresponding continuum evolution equation, analytically describing all possible steady states and their stability. By considering a number of different parameter sets, we determine the typical bifurcation scenarios of the network, and put on a rigorous footing some previously observed numerical results.
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Affiliation(s)
- Oleh Omel'chenko
- University of Potsdam, Institute of Physics and Astronomy, Karl-Liebknecht-Str. 24/25, Potsdam 14476, Germany
| | - Carlo R Laing
- School of Natural and Computational Sciences, Massey University, Private Bag 102-904 NSMC, Auckland, New Zealand
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10
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Saha R, Faramarzi S, Bloom R, Benally OJ, Wu K, di Girolamo A, Tonini D, Keirstead SA, Low WC, Netoff T, Wang JP. Strength-frequency curve for micromagnetic neurostimulation through excitatory postsynaptic potentials (EPSPs) on rat hippocampal neurons and numerical modeling of magnetic microcoil (μcoil). J Neural Eng 2022; 19. [PMID: 35030549 DOI: 10.1088/1741-2552/ac4baf] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/26/2021] [Accepted: 01/14/2022] [Indexed: 11/12/2022]
Abstract
OBJECTIVE The objective of this study was to measure the effect of micromagnetic stimulation (μMS) on hippocampal neurons, by using single microcoil (μcoil) prototype, Magnetic Pen (MagPen). MagPen will be used to stimulate the CA3 magnetically and excitatory post synaptic potential (EPSP) measurements will be made from the CA1. The threshold for μMS as a function of stimulation frequency of the current driving the µcoil will be demonstrated. Finally, the optimal stimulation frequency of the current driving the μcoil to minimize power will be estimated. APPROACH A biocompatible prototype, MagPen was built, and customized such that it is easy to adjust the orientation of the μcoil over the hippocampal tissue in an in vitro setting. Finite element modeling (FEM) of the μcoil was performed to estimate the spatial profiles of the magnetic flux density (in T) and the induced electric fields (in V/m). The induced electric field profiles generated at different values of current applied to the µcoil whether can elicit a neuron response was validated by numerical modeling. The modeling settings were replicated in experiments on rat hippocampal neurons. MAIN RESULTS The preferred orientation of MagPen over the Schaffer Collateral fibers was demonstrated such that they elicit a neuron response. The recorded EPSPs from CA1 due to μMS at CA3 were validated by applying tetrodotoxin (TTX). Finally, it was interpreted through numerical analysis that increasing frequency of the current driving the μcoil, led to a decrease in the current amplitude threshold for μMS. SIGNIFICANCE This work reports that μMS can be used to evoke population EPSPs in the CA1 of hippocampus. It demonstrates the strength-frequency curve for µMS and its unique features related to orientation dependence of the µcoils, spatial selectivity and distance dependence. Finally, the challenges related to µMS experiments were studied including ways to overcome them.
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Affiliation(s)
- Renata Saha
- Electrical and Computer Engineering, University of Minnesota Twin Cities, 200 Union Street SE, Kenneth Keller Hall, Rm 6-147D, Minneapolis, Minnesota, 55455, UNITED STATES
| | - Sadegh Faramarzi
- Department of Biomedical Engineering, University of Minnesota Twin Cities, Nils Hasselmo Hall,, 312 Church St SE,, Minneapolis, Minnesota, 55455, UNITED STATES
| | - Robert Bloom
- Department of Electrical and Computer Engineering, University of Minnesota, 200 Union Street SE, 4-174 Keller Hall, Minneapolis, Minneapolis, Minnesota, 55455, UNITED STATES
| | - Onri J Benally
- Department of Electrical and Computer Engineering, University of Minnesota Twin Cities, 200 Union Street SE,, Kenneth Keller Hall, Minneapolis, Minnesota, 55455, UNITED STATES
| | - Kai Wu
- Electrical and Computer Engineering, University of Minnesota Twin Cities, 200 Union Street SE, Minneapolis, Minnesota, 55455, UNITED STATES
| | - Arturo di Girolamo
- Department of Electrical and Computer Engineering, University of Minnesota Twin Cities, 200 Union Street SE, Kenneth Keller Hall, Minneapolis, Minnesota, 55455, UNITED STATES
| | - Denis Tonini
- Department of Electrical and Computer Engineering, University of Minnesota Twin Cities, 200 Union Street SE,, Kenneth Keller Hall, Minneapolis, Minnesota, 55455, UNITED STATES
| | - Susan A Keirstead
- Department of Integrative Biology & Physiology, University of Minnesota Twin Cities, Stem Cell Institute, LRB/MTRF 2873B (Campus Delivery Code), 2001 6th St SE, Minneapolis, Minnesota, 55455, UNITED STATES
| | - Walter C Low
- Department of Neurosurgery, University of Minnesota Twin Cities, LRB/MTRF 2873J (Campus Delivery Code), 2001 6th St SE, Minneapolis, Minnesota, 55455, UNITED STATES
| | - Theoden Netoff
- Department of Biomedical Engineering, University of Minnesota Twin Cities, 312 Church Street SE, 7-105 Nils Hasselmo Hall, Minneapolis, Minnesota, 55455, UNITED STATES
| | - Jian-Ping Wang
- Department of Electrical and Computer Engineering, University of Minnesota Twin Cities, 200 Union Street SE, Kenneth Keller Hall, Minneapolis, Minnesota, 55455, UNITED STATES
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11
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Nonperiodic stimulation for the treatment of refractory epilepsy: Applications, mechanisms, and novel insights. Epilepsy Behav 2021; 121:106609. [PMID: 31704250 DOI: 10.1016/j.yebeh.2019.106609] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/29/2019] [Revised: 10/14/2019] [Accepted: 10/14/2019] [Indexed: 11/21/2022]
Abstract
Electrical stimulation of the central nervous system is a promising alternative for the treatment of pharmacoresistant epilepsy. Successful clinical and experimental stimulation is most usually carried out as continuous trains of current or voltage pulses fired at rates of 100 Hz or above, since lower frequencies yield controversial results. On the other hand, stimulation frequency should be as low as possible, in order to maximize implant safety and battery efficiency. Moreover, the development of stimulation approaches has been largely empirical in general, while they should be engineered with the neurobiology of epilepsy in mind if a more robust, efficient, efficacious, and safe application is intended. In an attempt to reconcile evidence of therapeutic effect with the understanding of the underpinnings of epilepsy, our group has developed a nonstandard form of low-frequency stimulation with randomized interpulse intervals termed nonperiodic stimulation (NPS). The rationale was that an irregular temporal pattern would impair neural hypersynchronization, which is a hallmark of epilepsy. In this review, we start by briefly revisiting the literature on the molecular, cellular, and network level mechanisms of epileptic phenomena in order to highlight this often-overlooked emergent property of cardinal importance in the pathophysiology of the disease. We then review our own studies on the efficacy of NPS against acute and chronic experimental seizures and also on the anatomical and physiological mechanism of the method, paying special attention to the hypothesis that the lack of temporal regularity induces desynchronization. We also put forward a novel insight regarding the temporal structure of NPS that may better encompass the set of findings published by the group: the fact that intervals between stimulation pulses have a distribution that follows a power law and thus may induce natural-like activity that would compete with epileptiform discharge for the recruitment of networks. We end our discussion by mentioning ongoing research and future projects of our lab.
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12
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Gandolfi D, Boiani GM, Bigiani A, Mapelli J. Modeling Neurotransmission: Computational Tools to Investigate Neurological Disorders. Int J Mol Sci 2021; 22:4565. [PMID: 33925434 PMCID: PMC8123833 DOI: 10.3390/ijms22094565] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/15/2021] [Revised: 04/22/2021] [Accepted: 04/25/2021] [Indexed: 02/06/2023] Open
Abstract
The investigation of synaptic functions remains one of the most fascinating challenges in the field of neuroscience and a large number of experimental methods have been tuned to dissect the mechanisms taking part in the neurotransmission process. Furthermore, the understanding of the insights of neurological disorders originating from alterations in neurotransmission often requires the development of (i) animal models of pathologies, (ii) invasive tools and (iii) targeted pharmacological approaches. In the last decades, additional tools to explore neurological diseases have been provided to the scientific community. A wide range of computational models in fact have been developed to explore the alterations of the mechanisms involved in neurotransmission following the emergence of neurological pathologies. Here, we review some of the advancements in the development of computational methods employed to investigate neuronal circuits with a particular focus on the application to the most diffuse neurological disorders.
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Affiliation(s)
- Daniela Gandolfi
- Department of Biomedical, Metabolic and Neural Sciences, University of Modena and Reggio Emilia, Via Campi 287, 41125 Modena, Italy; (D.G.); (G.M.B.); (A.B.)
| | - Giulia Maria Boiani
- Department of Biomedical, Metabolic and Neural Sciences, University of Modena and Reggio Emilia, Via Campi 287, 41125 Modena, Italy; (D.G.); (G.M.B.); (A.B.)
| | - Albertino Bigiani
- Department of Biomedical, Metabolic and Neural Sciences, University of Modena and Reggio Emilia, Via Campi 287, 41125 Modena, Italy; (D.G.); (G.M.B.); (A.B.)
- Center for Neuroscience and Neurotechnology, University of Modena and Reggio Emilia, Via Campi 287, 41125 Modena, Italy
| | - Jonathan Mapelli
- Department of Biomedical, Metabolic and Neural Sciences, University of Modena and Reggio Emilia, Via Campi 287, 41125 Modena, Italy; (D.G.); (G.M.B.); (A.B.)
- Center for Neuroscience and Neurotechnology, University of Modena and Reggio Emilia, Via Campi 287, 41125 Modena, Italy
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13
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EEG-Single-Channel Envelope Synchronisation and Classification for Seizure Detection and Prediction. Brain Sci 2021; 11:brainsci11040516. [PMID: 33921588 PMCID: PMC8073763 DOI: 10.3390/brainsci11040516] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2021] [Revised: 04/02/2021] [Accepted: 04/14/2021] [Indexed: 01/23/2023] Open
Abstract
This paper tackles the complex issue of detecting and classifying epileptic seizures whilst maintaining the total calculations at a minimum. Where many systems depend on the coupling between multiple sources, leading to hundreds of combinations of electrodes, our method calculates the instantaneous phase between non-identical upper and lower envelopes of a single-electroencephalography channel reducing the workload to the total number of electrode points. From over 600 h of simulations, our method shows a sensitivity and specificity of 100% for high false-positive rates and 83% and 75%, respectively, for moderate to low false positive rates, which compares well to both single- and multi-channel-based methods. Furthermore, pre-ictal variations in synchronisation were detected in over 90% of patients implying a possible prediction system.
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14
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Zhang Y, Motter AE. Mechanism for Strong Chimeras. PHYSICAL REVIEW LETTERS 2021; 126:094101. [PMID: 33750176 DOI: 10.1103/physrevlett.126.094101] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2020] [Revised: 11/23/2020] [Accepted: 01/27/2021] [Indexed: 06/12/2023]
Abstract
Chimera states have attracted significant attention as symmetry-broken states exhibiting the unexpected coexistence of coherence and incoherence. Despite the valuable insights gained from analyzing specific systems, an understanding of the general physical mechanism underlying the emergence of chimeras is still lacking. Here, we show that many stable chimeras arise because coherence in part of the system is sustained by incoherence in the rest of the system. This mechanism may be regarded as a deterministic analog of noise-induced synchronization and is shown to underlie the emergence of strong chimeras. These are chimera states whose coherent domain is formed by identically synchronized oscillators. Recognizing this mechanism offers a new meaning to the interpretation that chimeras are a natural link between coherence and incoherence.
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Affiliation(s)
- Yuanzhao Zhang
- Department of Physics and Astronomy, Northwestern University, Evanston, Illinois 60208, USA
| | - Adilson E Motter
- Department of Physics and Astronomy, Northwestern University, Evanston, Illinois 60208, USA
- Northwestern Institute on Complex Systems, Northwestern University, Evanston, Illinois 60208, USA
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15
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Bou Assi E, Zerouali Y, Robert M, Lesage F, Pouliot P, Nguyen DK. Large-Scale Desynchronization During Interictal Epileptic Discharges Recorded With Intracranial EEG. Front Neurol 2020; 11:529460. [PMID: 33424733 PMCID: PMC7785800 DOI: 10.3389/fneur.2020.529460] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/24/2020] [Accepted: 11/27/2020] [Indexed: 11/13/2022] Open
Abstract
It is increasingly recognized that deep understanding of epileptic seizures requires both localizing and characterizing the functional network of the region where they are initiated, i. e., the epileptic focus. Previous investigations of the epileptogenic focus' functional connectivity have yielded contrasting results, reporting both pathological increases and decreases during resting periods and seizures. In this study, we shifted paradigm to investigate the time course of connectivity in relation to interictal epileptiform discharges. We recruited 35 epileptic patients undergoing intracranial EEG (iEEG) investigation as part of their presurgical evaluation. For each patient, 50 interictal epileptic discharges (IEDs) were marked and iEEG signals were epoched around those markers. Signals were narrow-band filtered and time resolved phase-locking values were computed to track the dynamics of functional connectivity during IEDs. Results show that IEDs are associated with a transient decrease in global functional connectivity, time-locked to the peak of the discharge and specific to the high range of the gamma frequency band. Disruption of the long-range connectivity between the epileptic focus and other brain areas might be an important process for the generation of epileptic activity. Transient desynchronization could be a potential biomarker of the epileptogenic focus since 1) the functional connectivity involving the focus decreases significantly more than the connectivity outside the focus and 2) patients with good surgical outcome appear to have a significantly more disconnected focus than patients with bad outcomes.
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Affiliation(s)
- Elie Bou Assi
- University of Montreal Hospital Research Center (CRCHUM), University of Montreal, Montreal, QC, Canada.,Department of Neuroscience, University of Montreal, Montreal, QC, Canada
| | - Younes Zerouali
- University of Montreal Hospital Research Center (CRCHUM), University of Montreal, Montreal, QC, Canada.,Institute of Biomedical Engineering, Polytechnique Montreal, Montreal, QC, Canada
| | - Manon Robert
- University of Montreal Hospital Research Center (CRCHUM), University of Montreal, Montreal, QC, Canada
| | - Frederic Lesage
- Institute of Biomedical Engineering, Polytechnique Montreal, Montreal, QC, Canada.,Montreal Heart Institute, Montreal, QC, Canada
| | - Philippe Pouliot
- Institute of Biomedical Engineering, Polytechnique Montreal, Montreal, QC, Canada.,Montreal Heart Institute, Montreal, QC, Canada
| | - Dang K Nguyen
- University of Montreal Hospital Research Center (CRCHUM), University of Montreal, Montreal, QC, Canada.,Department of Neuroscience, University of Montreal, Montreal, QC, Canada
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16
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Ghiasvand S, Dussourd CR, Liu J, Song Y, Berdichevsky Y. Variability of seizure-like activity in an in vitro model of epilepsy depends on the electrical recording method. Heliyon 2020; 6:e05587. [PMID: 33299935 PMCID: PMC7702014 DOI: 10.1016/j.heliyon.2020.e05587] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/24/2020] [Revised: 11/12/2020] [Accepted: 11/19/2020] [Indexed: 11/30/2022] Open
Abstract
Background Hippocampal and cortical slice-based models are widely used to study seizures and epilepsy. Seizure detection and quantification are essential components for studying mechanisms of epilepsy and assessing therapeutic interventions. To obtain meaningful signals and maximize experimental throughput, variability should be minimized. Some electrical recording methods require insertion of an electrode into neuronal tissue, change in slice chemical microenvironment, and transients in temperature and pH. These perturbations can cause acute and long-term alterations of the neuronal network which may be reflected in the variability of the recorded signal. New method In this study we investigated the effect of experimental perturbations in three local field potential (LFP) recording methods including substrate micro-wires (s-MWs), multiple electrode arrays (MEAs), and inserted micro wire electrodes (i-MW). These methods enabled us to isolate effects of different perturbations. We used organotypic hippocampal slices (OHCs) as an in-vitro model of posttraumatic epilepsy. To investigate the effect of the disturbances caused by the recording method on the paroxysmal events, we introduced jitter analysis, which is sensitive to small differences in the seizure spike timing. Results Medium replacement can introduce long-lasting perturbations. Electrode insertion increased variability on a shorter time scale. OHCs also underwent spontaneous state transitions characterized by transient increases in variability. Comparison with existing methods This new method of seizure waveform analysis allows for more sensitive assessment of variability of ictal events than simply measuring seizure frequency and duration. Conclusion We demonstrated that some of the variability in OHC recordings are due to experimental perturbations while some are spontaneous and independent of recording method.
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Affiliation(s)
| | | | - Jing Liu
- Electrical Engineering Lehigh University, United States
| | - Yu Song
- Bioengineering Lehigh University, United States
| | - Yevgeny Berdichevsky
- Bioengineering Lehigh University, United States.,Electrical Engineering Lehigh University, United States
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17
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Medeiros DDC, Cota VR, Oliveira ACP, Moreira FA, Moraes MFD. The Endocannabinoid System Activation as a Neural Network Desynchronizing Mediator for Seizure Suppression. Front Behav Neurosci 2020; 14:603245. [PMID: 33281577 PMCID: PMC7691588 DOI: 10.3389/fnbeh.2020.603245] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/05/2020] [Accepted: 10/20/2020] [Indexed: 01/08/2023] Open
Abstract
The understanding that hyper-excitability and hyper-synchronism in epilepsy are indissociably bound by a cause-consequence relation has only recently been challenged. Thus, therapeutic strategies for seizure suppression have often aimed at inhibiting excitatory circuits and/or activating inhibitory ones. However, new approaches that aim to desynchronize networks or compromise abnormal coupling between adjacent neural circuitry have been proven effective, even at the cost of enhancing local neuronal activation. Although most of these novel perspectives targeting circuitry desynchronization and network coupling have been implemented by non-pharmacological devices, we argue that there may be endogenous neurochemical systems that act primarily in the desynchronization component of network behavior rather than dampening excitability of individual neurons. This review explores the endocannabinoid system as one such possible pharmacological landmark for mimicking a form of "on-demand" desynchronization analogous to those proposed by deep brain stimulation in the treatment of epilepsy. This essay discusses the evidence supporting the role of the endocannabinoid system in modulating the synchronization and/or coupling of distinct local neural circuitry; which presents obvious implications on the physiological setting of proper sensory-motor integration. Accordingly, the process of ictogenesis involves pathological circuit coupling that could be avoided, or at least have its spread throughout the containment of other areas, if such endogenous mechanisms of control could be activated or potentiated by pharmacological intervention. In addition, we will discuss evidence that supports not only a weaker role played on neuronal excitability but the potential of the endocannabinoid system strengthening its modulatory effect, only when circuitry coupling surpasses a level of activation.
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Affiliation(s)
- Daniel de Castro Medeiros
- Núcleo de Neurociências, Departamento de Fisiologia e Biofísica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
| | - Vinícius Rosa Cota
- Laboratório Interdisciplinar de Neuroengenharia e Neurociências, Departamento de Engenharia Elétrica, Universidade Federal de São João Del-Rei, São João Del-Rei, Brazil
| | - Antonio Carlos P Oliveira
- Departamento de Farmacologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
| | - Fabricio A Moreira
- Departamento de Farmacologia, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
| | - Márcio Flávio Dutra Moraes
- Núcleo de Neurociências, Departamento de Fisiologia e Biofísica, Instituto de Ciências Biológicas, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.,Centro de Tecnologia e Pesquisa em Magneto Ressonância, Programa de Pós-Graduação em Engenharia Elétrica, Universidade Federal de Minas Gerais, Belo Horizonte, Brazil
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18
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Iešmantas T, Alzbutas R. Convolutional neural network for detection and classification of seizures in clinical data. Med Biol Eng Comput 2020; 58:1919-1932. [PMID: 32533511 DOI: 10.1007/s11517-020-02208-7] [Citation(s) in RCA: 13] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/15/2019] [Accepted: 05/31/2020] [Indexed: 12/13/2022]
Abstract
Epileptic seizure detection and classification in clinical electroencephalogram data still is a challenge, and only low sensitivity with a high rate of false positives has been achieved with commercially available seizure detection tools, which usually are patient non-specific. Epilepsy patients suffer from severe detrimental effects like physical injury or depression due to unpredictable seizures. However, even in hospitals due to the high rate of false positives, the seizure alert systems are of poor help for patients as tools of seizure detection are mostly trained on unrealistically clean data, containing little noise and obtained under controlled laboratory conditions, where patient groups are homogeneous, e.g. in terms of age or type of seizures. In this study authors present the approach for detection and classification of a seizure using clinical data of electroencephalograms and a convolutional neural network trained on features of brain synchronisation and power spectrum. Various deep learning methods were applied, and the network was trained on a very heterogeneous clinical electroencephalogram dataset. In total, eight different types of seizures were considered, and the patients were of various ages, health conditions and they were observed under clinical conditions. Despite this, the classifier presented in this paper achieved sensitivity and specificity equal to 0.68 and 0.67, accordingly, which is a significant improvement as compared to the known results for clinical data. Graphical abstract.
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Affiliation(s)
- Tomas Iešmantas
- Department of Mathematics and Natural Sciences, Kaunas University of Technology, 44249, Kaunas, Lithuania.
| | - Robertas Alzbutas
- Department of Mathematics and Natural Sciences, Kaunas University of Technology, 44249, Kaunas, Lithuania
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19
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Forrester M, Crofts JJ, Sotiropoulos SN, Coombes S, O'Dea RD. The role of node dynamics in shaping emergent functional connectivity patterns in the brain. Netw Neurosci 2020; 4:467-483. [PMID: 32537537 PMCID: PMC7286301 DOI: 10.1162/netn_a_00130] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2019] [Accepted: 01/31/2020] [Indexed: 11/07/2022] Open
Abstract
The contribution of structural connectivity to functional brain states remains poorly understood. We present a mathematical and computational study suited to assess the structure–function issue, treating a system of Jansen–Rit neural mass nodes with heterogeneous structural connections estimated from diffusion MRI data provided by the Human Connectome Project. Via direct simulations we determine the similarity of functional (inferred from correlated activity between nodes) and structural connectivity matrices under variation of the parameters controlling single-node dynamics, highlighting a nontrivial structure–function relationship in regimes that support limit cycle oscillations. To determine their relationship, we firstly calculate network instabilities giving rise to oscillations, and the so-called ‘false bifurcations’ (for which a significant qualitative change in the orbit is observed, without a change of stability) occurring beyond this onset. We highlight that functional connectivity (FC) is inherited robustly from structure when node dynamics are poised near a Hopf bifurcation, whilst near false bifurcations, and structure only weakly influences FC. Secondly, we develop a weakly coupled oscillator description to analyse oscillatory phase-locked states and, furthermore, show how the modular structure of FC matrices can be predicted via linear stability analysis. This study thereby emphasises the substantial role that local dynamics can have in shaping large-scale functional brain states. Patterns of oscillation across the brain arise because of structural connections between brain regions. However, the type of oscillation at a site may also play a contributory role. We focus on an idealised model of a neural mass network, coupled using estimates of structural connections obtained via tractography on Human Connectome Project MRI data. Using a mixture of computational and mathematical techniques, we show that functional connectivity is inherited most strongly from structural connectivity when the network nodes are poised at a Hopf bifurcation. However, beyond the onset of this oscillatory instability a phase-locked network state can undergo a false bifurcation, and structural connectivity only weakly influences functional connectivity. This highlights the important effect that local dynamics can have on large-scale brain states.
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Affiliation(s)
- Michael Forrester
- Centre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham, UK
| | - Jonathan J Crofts
- Department of Physics and Mathematics, School of Science and Technology, Nottingham Trent University, Nottingham, UK
| | - Stamatios N Sotiropoulos
- Sir Peter Mansfield Imaging Centre, Queen's Medical Centre, University of Nottingham, Nottingham, UK
| | - Stephen Coombes
- Centre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham, UK
| | - Reuben D O'Dea
- Centre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham, UK
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20
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Zhang T, Sun Y, Li H, Yan G, Tanabe S, Miao R, Wang Y, Caffo BS, Quigg MS. Bayesian inference of a directional brain network model for intracranial EEG data. Comput Stat Data Anal 2020. [DOI: 10.1016/j.csda.2019.106847] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/29/2022]
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21
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Forrester M, Crofts JJ, Sotiropoulos SN, Coombes S, O'Dea RD. The role of node dynamics in shaping emergent functional connectivity patterns in the brain. Netw Neurosci 2020; 4:467-483. [PMID: 32537537 DOI: 10.1162/netn\_a_00130] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.2] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/02/2019] [Accepted: 01/31/2020] [Indexed: 05/21/2023] Open
Abstract
The contribution of structural connectivity to functional brain states remains poorly understood. We present a mathematical and computational study suited to assess the structure-function issue, treating a system of Jansen-Rit neural mass nodes with heterogeneous structural connections estimated from diffusion MRI data provided by the Human Connectome Project. Via direct simulations we determine the similarity of functional (inferred from correlated activity between nodes) and structural connectivity matrices under variation of the parameters controlling single-node dynamics, highlighting a nontrivial structure-function relationship in regimes that support limit cycle oscillations. To determine their relationship, we firstly calculate network instabilities giving rise to oscillations, and the so-called 'false bifurcations' (for which a significant qualitative change in the orbit is observed, without a change of stability) occurring beyond this onset. We highlight that functional connectivity (FC) is inherited robustly from structure when node dynamics are poised near a Hopf bifurcation, whilst near false bifurcations, and structure only weakly influences FC. Secondly, we develop a weakly coupled oscillator description to analyse oscillatory phase-locked states and, furthermore, show how the modular structure of FC matrices can be predicted via linear stability analysis. This study thereby emphasises the substantial role that local dynamics can have in shaping large-scale functional brain states.
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Affiliation(s)
- Michael Forrester
- Centre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham, UK
| | - Jonathan J Crofts
- Department of Physics and Mathematics, School of Science and Technology, Nottingham Trent University, Nottingham, UK
| | - Stamatios N Sotiropoulos
- Sir Peter Mansfield Imaging Centre, Queen's Medical Centre, University of Nottingham, Nottingham, UK
| | - Stephen Coombes
- Centre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham, UK
| | - Reuben D O'Dea
- Centre for Mathematical Medicine and Biology, School of Mathematical Sciences, University of Nottingham, Nottingham, UK
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22
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Müller M, Caporro M, Gast H, Pollo C, Wiest R, Schindler K, Rummel C. Linear and nonlinear interrelations show fundamentally distinct network structure in preictal intracranial EEG of epilepsy patients. Hum Brain Mapp 2019; 41:467-483. [PMID: 31625670 PMCID: PMC7268049 DOI: 10.1002/hbm.24816] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2019] [Revised: 09/18/2019] [Accepted: 09/20/2019] [Indexed: 12/24/2022] Open
Abstract
Resection of the seizure generating tissue can be highly beneficial in patients with drug-resistant epilepsy. However, only about half of all patients undergoing surgery get permanently and completely seizure free. Investigating the dependences between intracranial EEG signals adds a multivariate perspective largely unavailable to visual EEG analysis, which is the current clinical practice. We examined linear and nonlinear interrelations between intracranial EEG signals regarding their spatial distribution and network characteristics. The analyzed signals were recorded immediately before clinical seizure onset in epilepsy patients who received a standardized electrode implantation targeting the mesiotemporal structures. The linear interrelation networks were predominantly locally connected and highly reproducible between patients. In contrast, the nonlinear networks had a clearly centralized structure, which was specific for the individual pathology. The nonlinear interrelations were overrepresented in the focal hemisphere and in patients with no or only rare seizures after surgery specifically in the resected tissue. Connections to the outside were predominantly nonlinear. In all patients without worthwhile improvement after resective treatment, tissue producing strong nonlinear interrelations was left untouched by surgery. Our findings indicate that linear and nonlinear interrelations play fundamentally different roles in preictal intracranial EEG. Moreover, they suggest nonlinear signal interrelations to be a marker of epileptogenic tissue and not a characteristic of the mesiotemporal structures. Our results corroborate the network-based nature of epilepsy and suggest the application of network analysis to support the planning of resective epilepsy surgery.
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Affiliation(s)
- Michael Müller
- Support Center for Advanced Neuroimaging (SCAN), University Institute for Diagnostic and Interventional Neuroradiology, Inselspital, Bern, Switzerland.,Department of Neurology, Inselspital, Bern University Hospital, University Bern, Bern, Switzerland
| | - Matteo Caporro
- Department of Neurology, Inselspital, Bern University Hospital, University Bern, Bern, Switzerland
| | - Heidemarie Gast
- Department of Neurology, Inselspital, Bern University Hospital, University Bern, Bern, Switzerland
| | - Claudio Pollo
- Department of Neurosurgery, Inselspital, Bern University Hospital, University Bern, Bern, Switzerland
| | - Roland Wiest
- Support Center for Advanced Neuroimaging (SCAN), University Institute for Diagnostic and Interventional Neuroradiology, Inselspital, Bern, Switzerland
| | - Kaspar Schindler
- Department of Neurology, Inselspital, Bern University Hospital, University Bern, Bern, Switzerland
| | - Christian Rummel
- Support Center for Advanced Neuroimaging (SCAN), University Institute for Diagnostic and Interventional Neuroradiology, Inselspital, Bern, Switzerland
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23
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Alcantara-Gonzalez D, Villasana-Salazar B, Peña-Ortega F. Single amyloid-beta injection exacerbates 4-aminopyridine-induced seizures and changes synaptic coupling in the hippocampus. Hippocampus 2019; 29:1150-1164. [PMID: 31381216 DOI: 10.1002/hipo.23129] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2019] [Revised: 05/12/2019] [Accepted: 06/05/2019] [Indexed: 11/09/2022]
Abstract
Accumulation of amyloid-beta (Aβ) in temporal lobe structures, including the hippocampus, is related to a variety of Alzheimer's disease symptoms and seems to be involved in the induction of neural network hyperexcitability and even seizures. Still, a direct evaluation of the pro-epileptogenic effects of Aβ in vivo, and of the underlying mechanisms, is missing. Thus, we tested whether the intracisternal injection of Aβ modulates 4-aminopyridine (4AP)-induced epileptiform activity, hippocampal network function, and its synaptic coupling. When tested 3 weeks after its administration, Aβ (but not its vehicle) reduces the latency for 4AP-induced seizures, increases the number of generalized seizures, exacerbates the time to fully recover from seizures, and favors seizure-induced death. These pro-epileptogenic effects of Aβ correlate with a reduction in the power of the spontaneous hippocampal network activity, involving all frequency bands in vivo and only the theta band (4-10 Hz) in vitro. The pro-epileptogenic effects of Aβ also correlate with a reduction of the Schaffer-collateral CA1 synaptic coupling in vitro, which is exacerbated by the sequential bath application of 4-AP and Aβ. In summary, Aβ produces long-lasting pro-epileptic effects that can be due to alterations in the hippocampal circuit, impacting its coordinated network activity and its synaptic efficiency. It is likely that normalizing synaptic coupling and/or coordinated neural network activity (i.e., theta activity) may contribute not only to improve cognitive function in Alzheimer's disease but also to avoid hyperexcitation in conditions of amyloidosis.
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Affiliation(s)
- David Alcantara-Gonzalez
- Departamento de Neurobiología del Desarrollo y Neurofisiología, Instituto de Neurobiología, Universidad Nacional Autónoma de México, Querétaro, Qro, Mexico
| | - Benjamín Villasana-Salazar
- Departamento de Neurobiología del Desarrollo y Neurofisiología, Instituto de Neurobiología, Universidad Nacional Autónoma de México, Querétaro, Qro, Mexico
| | - Fernando Peña-Ortega
- Departamento de Neurobiología del Desarrollo y Neurofisiología, Instituto de Neurobiología, Universidad Nacional Autónoma de México, Querétaro, Qro, Mexico
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24
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Martire DJ, Wong S, Mikhail M, Ochi A, Otsubo H, Snead OC, Donner E, Ibrahim GM. Thalamocortical dysrhythmia in intraoperative recordings of focal epilepsy. J Neurophysiol 2019; 121:2020-2027. [DOI: 10.1152/jn.00079.2019] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Resonant interactions between the thalamus and cortex subserve a critical role for maintenance of consciousness as well as cognitive functions. In states of abnormal thalamic inhibition, thalamocortical dysrhythmia (TCD) has been described. The characteristics of TCD include a slowing of resting oscillations, ectopic high-frequency activity, and increased cross-frequency coupling. Here, we demonstrate the presence of TCD in four patients who underwent resective epilepsy surgery with chronically implanted electrodes under anesthesia, continuously recording activity from brain regions at the periphery of the epileptogenic zone before and after resection. Following resection, we report an acceleration of the large-scale network resting frequency coincident with decreases in cross-frequency phase-amplitude coupling. Interregional functional connectivity in the surrounding cortex was also increased following resection of the epileptogenic focus. These findings provide evidence for the presence of TCD in focal epilepsy and highlight the importance of reciprocal thalamocortical oscillatory interactions in defining novel biomarkers for resective surgeries. NEW & NOTEWORTHY Thalamocortical dysrhythmia (TCD) occurs in the context of thalamic dysfacilitation and is characterized by slowing of resting oscillations, ectopic high-frequency activity, and cross-frequency coupling. We provide evidence for TCD in focal epilepsy by studying electrophysiological changes occurring at the periphery of the resection margin. We report acceleration of resting activity coincident with decreased cross-frequency coupling and increased functional connectivity. The study of TCD in epilepsy has implications as a biomarker and therapeutic target.
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Affiliation(s)
- Daniel J. Martire
- Program in Neuroscience and Mental Health, Hospital for Sick Children Research Institute, Toronto, Ontario, Canada
| | - Simeon Wong
- Program in Neuroscience and Mental Health, Hospital for Sick Children Research Institute, Toronto, Ontario, Canada
- Institute of Biomaterials and Biomedical Engineering, University of Toronto, Toronto, Ontario, Canada
| | - Mirriam Mikhail
- Faculty of Medicine, University of Toronto, Toronto, Ontario, Canada
| | - Ayako Ochi
- Division of Neurology, Hospital for Sick Children, Toronto, Ontario, Canada
| | - Hiroshi Otsubo
- Division of Neurology, Hospital for Sick Children, Toronto, Ontario, Canada
| | - O. Carter Snead
- Division of Neurology, Hospital for Sick Children, Toronto, Ontario, Canada
| | - Elizabeth Donner
- Division of Neurology, Hospital for Sick Children, Toronto, Ontario, Canada
| | - George M. Ibrahim
- Program in Neuroscience and Mental Health, Hospital for Sick Children Research Institute, Toronto, Ontario, Canada
- Institute of Biomaterials and Biomedical Engineering, University of Toronto, Toronto, Ontario, Canada
- Division of Neurosurgery, Hospital for Sick Children, Department of Surgery, University of Toronto, Toronto, Ontario, Canada
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Farahmand S, Sobayo T, Mogul DJ. Noise-Assisted Multivariate EMD-Based Mean-Phase Coherence Analysis to Evaluate Phase-Synchrony Dynamics in Epilepsy Patients. IEEE Trans Neural Syst Rehabil Eng 2018; 26:2270-2279. [PMID: 30452374 DOI: 10.1109/tnsre.2018.2881606] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/08/2022]
Abstract
Spatiotemporal evolution of synchrony dynamics among neuronal populations plays an important role in decoding complicated brain function in normal cognitive processing as well as during pathological conditions such as epileptic seizures. In this paper, a non-linear analytical methodology is proposed to quantitatively evaluate the phase-synchrony dynamics in epilepsy patients. A set of finite neuronal oscillators was adaptively extracted from a multi-channel electrocorticographic (ECoG) dataset utilizing noise-assisted multivariate empirical mode de-composition (NA-MEMD). Next, the instantaneous phases of the oscillatory functions were extracted using the Hilbert transform in order to be utilized in the mean-phase coherence analysis. The phase-synchrony dynamics were then assessed using eigenvalue decomposition. The extracted neuronal oscillators were grouped with respect to their frequency range into wideband (1-600 Hz), ripple (80-250 Hz), and fast-ripple (250-600 Hz) bands in order to investigate the dynamics of ECoG activity in these frequency ranges as seizures evolve. Drug-refractory patients with frontal and temporal lobe epilepsy demonstrated a reduction in phase-synchrony around seizure onset. However, the network phase-synchrony started to increase toward seizure end and achieved its maximum level at seizure offset for both types of epilepsy. This result suggests that hyper-synchronization of the epileptic network may be an essential self-regulatory mechanism by which the brain terminates seizures.
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Olguín-Rodríguez PV, Arzate-Mena JD, Corsi-Cabrera M, Gast H, Marín-García A, Mathis J, Ramos Loyo J, Del Rio-Portilla IY, Rummel C, Schindler K, Müller M. Characteristic Fluctuations Around Stable Attractor Dynamics Extracted from Highly Nonstationary Electroencephalographic Recordings. Brain Connect 2018; 8:457-474. [PMID: 30198323 DOI: 10.1089/brain.2018.0609] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/22/2022] Open
Abstract
Since the discovery of electrical activity of the brain, electroencephalographic (EEG) recordings constitute one of the most popular techniques of brain research. However, EEG signals are highly nonstationary and one should expect that averages of the cross-correlation coefficient, which may take positive and negative values with equal probability, (almost) vanish when estimated over long data segments. Instead, we found that the average zero-lag cross-correlation matrix estimated with a running window over the whole night of sleep EEGs, or of resting state during eyes-open and eyes-closed conditions of healthy subjects shows a characteristic correlation pattern containing pronounced nonzero values. A similar correlation structure has already been encountered in scalp EEG signals containing focal onset seizures. Therefore, we conclude that this structure is independent of the physiological state. Because of its pronounced similarity across subjects, we believe that it depicts a generic feature of the brain dynamics. Namely, we interpret this pattern as a manifestation of a dynamical ground state of the brain activity, necessary to preserve an efficient operational mode, or, expressed in terms of dynamical system theory, we interpret it as a "shadow" of the evolution on (or close to) an attractor in phase space. Nonstationary dynamical aspects of higher cerebral processes should manifest in deviations from this stable pattern. We confirm this hypothesis through a correlation analysis of EEG recordings of 10 healthy subjects during night sleep, 20 recordings of 9 epilepsy patients, and 42 recordings of 21 healthy subjects in resting state during eyes-open and eyes-closed conditions. In particular, we show that the estimation of deviations from the stationary correlation structures provides a more significant differentiation of physiological states and more homogeneous results across subjects.
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Affiliation(s)
- Paola V Olguín-Rodríguez
- 1 Instituto de Investigación en Ciencias Básicas y Aplicadas , Universidad Autónoma del Estado de Morelos (UAEM), Cuernavaca, México
| | - J Daniel Arzate-Mena
- 1 Instituto de Investigación en Ciencias Básicas y Aplicadas , Universidad Autónoma del Estado de Morelos (UAEM), Cuernavaca, México
| | - Maria Corsi-Cabrera
- 2 Facultad de Psicología, Universidad Nacional Autónoma de México (UNAM) , Mexico City, México.,3 Unidad de Neurodesarrollo, Instituto de Neurobiología , Universidad Nacional Autónoma de México (UNAM), Juriquilla, México
| | - Heidemarie Gast
- 4 Department of Neurology, Inselspital Bern, University Bern , Bern, Switzerland
| | - Arlex Marín-García
- 5 Instituto de Ciencias Físicas (ICF) , Universidad Nacional Autónoma de México (UNAM), Cuernavaca, México
| | - Johannes Mathis
- 6 Support Center for Advanced Neuroimaging, Institute for Diagnostic and Interventional Neuroradiology, Inselspital Bern, University Bern , Bern, Switzerland
| | - Julieta Ramos Loyo
- 7 Instituto de Neurociencias , Universidad de Guadalajara, Guadalajara, México
| | | | - Christian Rummel
- 6 Support Center for Advanced Neuroimaging, Institute for Diagnostic and Interventional Neuroradiology, Inselspital Bern, University Bern , Bern, Switzerland
| | - Kaspar Schindler
- 4 Department of Neurology, Inselspital Bern, University Bern , Bern, Switzerland .,6 Support Center for Advanced Neuroimaging, Institute for Diagnostic and Interventional Neuroradiology, Inselspital Bern, University Bern , Bern, Switzerland
| | - Markus Müller
- 8 Centro de Investigación en Ciencias, Universidad Autónoma del Estado de Morelos (UAEM) , Cuernavaca, México.,9 Centro Internacional de Ciencias A. C. , Cuernavaca, México
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Qiu Y, Zhou W, Yu N, Du P. Denoising Sparse Autoencoder-Based Ictal EEG Classification. IEEE Trans Neural Syst Rehabil Eng 2018; 26:1717-1726. [PMID: 30106681 DOI: 10.1109/tnsre.2018.2864306] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/06/2022]
Abstract
Automatic seizure detection technology can automatically mark the EEG by using the epileptic detection algorithm, which is helpful to the diagnosis and treatment of epileptic diseases. This paper presents an EEG classification framework based on the denoising sparse autoencoder. The denoising sparse autoencoder (DSAE) is an improved unsupervised deep neural network over sparse autoencoder and denoising autoencoder, which can learn the closest representation of the data. The sparsity constraint applied in the hidden layer of the network makes the expression of data as sparse as possible so as to obtain a more efficient representation of EEG signals. In addition, corrupting operation used in input data help to enhance the robustness of the system and make it suitable for the analysis of non-stationary epileptic EEG signals. In this paper, we first imported the pre-processed training data to the DSAE network and trained the network. A logistic regression classifier was connected to the top of the DSAE. Then, put the test data into the system for classification. Finally, the output results of the overall network were post-processed to obtain the final epilepsy detection results. In the two-class (nonseizure and seizure EEGs) problem, the system has achieved effective results with the average sensitivity of 100%, specificity of 100%, and recognition of 100%, showing that the proposed framework can be efficient for the classification of epileptic EEGs.
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Lillis KP, Staley KJ. Optogenetic dissection of ictogenesis: in search of a targeted anti-epileptic therapy. J Neural Eng 2018; 15:041001. [PMID: 29536948 PMCID: PMC6257979 DOI: 10.1088/1741-2552/aab66a] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/29/2023]
Abstract
For over a century, epileptic seizures have been characterized as a state of pathological, hypersynchronous brain activity. Anti-epileptic therapies have been developed largely based on the dogma that the altered brain rhythms result from an overabundance of glutamatergic activity or insufficient GABAergic inhibition. The most effective drugs in use today act to globally decrease excitation, increase inhibition, or decrease all activity. Unfortunately, such broad alterations to brain activity often lead to impactful side effects such as drowsiness, cognitive impairment, and sleep disruption. Recent advances in optical imaging, optogenetics, and chemogenetics have made it feasible to record and alter neuronal activity with single neuron resolution and genetically directed targeting. The goal of this review it to summarize the usage of these research tools in the study of ictogenesis (seizure generation) and propose a translational pathway by which these studies could result in novel clinical therapies. This manuscript is not intended to serve as an exhaustive list of optogenetic tools nor as a summary of all optogenetic manipulations in epilepsy research. Rather, we will focus on the tools and research aimed at dissecting the basic neuron-level interactions underlying ictogenesis.
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29
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Jeter R, Porfiri M, Belykh I. Overcoming network resilience to synchronization through non-fast stochastic broadcasting. CHAOS (WOODBURY, N.Y.) 2018; 28:071104. [PMID: 30070517 DOI: 10.1063/1.5044420] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/12/2018] [Accepted: 07/06/2018] [Indexed: 06/08/2023]
Abstract
Stochastic broadcasting is an important and understudied paradigm for controlling networks. In this paper, we examine the feasibility of on-off broadcasting from a single reference node to induce synchronization in a target network with connections from the reference node that stochastically switch in time with an arbitrary switching period. Internal connections within the target network are static and promote the network's resilience to externally induced synchronization. Through rigorous mathematical analysis, we uncover a complex interplay between the network topology and the switching period of stochastic broadcasting, fostering or hindering synchronization to the reference node. We derive a criterion which reveals an explicit dependence of induced synchronization on the properties of the network (the Laplacian spectrum) and the switching process (strength of broadcasting, switching period, and switching probabilities). With coupled chaotic tent maps as our test-bed, we prove the emergence of "windows of opportunity" where only non-fast switching periods are favorable to synchronization. The size of these windows of opportunity is shaped by the Laplacian spectrum such that the switching period needs to be manipulated accordingly to induce synchronization. Surprisingly, only the zero and the largest eigenvalues of the Laplacian matrix control these windows of opportunities for tent maps within a wide parameter region.
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Affiliation(s)
- Russell Jeter
- Department of Mathematics and Statistics, Georgia State University, P.O. Box 4110, Atlanta, Georgia 30302-4110, USA
| | - Maurizio Porfiri
- Department of Mechanical and Aerospace Engineering, New York University Tandon School of Engineering, Brooklyn, New York 11201, USA
| | - Igor Belykh
- Department of Mathematics and Statistics, Georgia State University, P.O. Box 4110, Atlanta, Georgia 30302-4110, USA
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30
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Eissa TL, Schevon CA, Emerson RG, Mckhann GM, Goodman RR, Van Drongelen W. The Relationship Between Ictal Multi-Unit Activity and the Electrocorticogram. Int J Neural Syst 2018; 28:1850027. [PMID: 30001641 DOI: 10.1142/s0129065718500272] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
During neocortical seizures in patients with epilepsy, microelectrode array recordings from the ictal core show a strong correlation between the fast, cellular spiking activities and the low-frequency component of the potential field, reflected in the electrocorticogram (ECoG). Here, we model the relationship between the cellular spike activity and this low-frequency component as the input and output signals of a linear time invariant system. Our approach is based on the observation that this relationship can be characterized by a so-called sinc function, the unit impulse response of an ideal (brick-wall) filter. Accordingly, using a brick-wall filter, we are able to convert ictal cellular spike inputs into an output that significantly correlates with the observed seizure activity in the ECoG (r = 0.40 - 0.56,p < 0.01) , while ECoG recordings of subsequent seizures within patients also show significant, but lower, correlations (r = 0.10 - 0.30,p < 0.01) . Furthermore, we can produce seizure-like output signals using synthetic spike trains with ictal properties. We propose a possible physiological mechanism to explain the observed properties associated with an ideal filter, and discuss the potential use of our approach for the evaluation of anticonvulsant strategies.
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Affiliation(s)
- Tahra L Eissa
- 1 Committee on Neurobiology, University of Chicago, 5801 S Ellis Ave, Chicago, IL 60637, USA.,2 Department of Neurology, Columbia University, New York 10032, NY, USA
| | - Catherine A Schevon
- 3 Department of Neurology, Columbia University, 710 W 168th St, New York 10032, NY, USA
| | - Ronald G Emerson
- 3 Department of Neurology, Columbia University, 710 W 168th St, New York 10032, NY, USA.,4 Department of Neurology, Weill Cornell Medical College, New York 10021, NY, USA
| | - Guy M Mckhann
- 5 Department of Neurological Surgery, Columbia University, 710 W 168th St, New York 10032, NY, USA
| | - Robert R Goodman
- 5 Department of Neurological Surgery, Columbia University, 710 W 168th St, New York 10032, NY, USA.,6 Department of Neurosurgery, Icahn School of Medicine at Mount Sinai, New York 10029, NY, USA
| | - Wim Van Drongelen
- 7 Department of Pediatrics, University of Chicago, 900 E 57th St, Chicago, IL 60637, USA
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31
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Schulte JT, Wierenga CJ, Bruining H. Chloride transporters and GABA polarity in developmental, neurological and psychiatric conditions. Neurosci Biobehav Rev 2018; 90:260-271. [PMID: 29729285 DOI: 10.1016/j.neubiorev.2018.05.001] [Citation(s) in RCA: 76] [Impact Index Per Article: 10.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/09/2018] [Revised: 03/20/2018] [Accepted: 05/01/2018] [Indexed: 12/22/2022]
Abstract
Neuronal chloride regulation is a determinant factor for the dynamic tuning of GABAergic inhibition during and beyond brain development. This regulation is mainly dependent on the two co-transporters K+/Cl- co-transporter KCC2 and Na+/K+/Cl- co-transporter NKCC1, whose activity can decrease or increase neuronal chloride concentrations respectively. Altered expression and/or activity of either of these co-transporters has been associated with a wide variety of brain disorders including developmental disorders, epilepsy, schizophrenia and stroke. Here, we review current knowledge on chloride transporter expression and activity regulation and highlight the intriguing potential for existing and future interventions to support chloride homeostasis across a wide range of mental disorders and neurological conditions.
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Affiliation(s)
- Joran T Schulte
- Department of Psychiatry, Brain Center Rudolf Magnus, University Medical Center, Heidelberglaan 100, 3508 GA Utrecht The Netherlands
| | - Corette J Wierenga
- Division of Biology, Faculty of Science, Utrecht University, Padualaan 8, 3584 CH, Utrecht, The Netherlands
| | - Hilgo Bruining
- Department of Psychiatry, Brain Center Rudolf Magnus, University Medical Center, Heidelberglaan 100, 3508 GA Utrecht The Netherlands.
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32
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Ibrahim GM, Wong S, Morgan BR, Lipsman N, Fallah A, Weil AG, Krishna V, Wennberg RA, Lozano AA. Phase-amplitude coupling within the anterior thalamic nuclei during seizures. J Neurophysiol 2018; 119:1497-1505. [DOI: 10.1152/jn.00832.2017] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/22/2022] Open
Abstract
Cross-frequency phase-amplitude coupling (cfPAC) subserves an integral role in the hierarchical organization of interregional neuronal communication and is also expressed by epileptogenic cortex during seizures. Here, we sought to characterize patterns of cfPAC expression in the anterior thalamic nuclei during seizures by studying extra-operative recordings in patients implanted with deep brain stimulation electrodes for intractable epilepsy. Nine seizures from two patients were analyzed in the peri-ictal period. CfPAC was calculated using the modulation index and interregional functional connectivity was indexed using the phase-locking value. Statistical analysis was performed within subjects on the basis of nonparametric permutation and corrected with Gaussian field theory. Five of the nine analyzed seizures demonstrated significant cfPAC. Significant cfPAC occurred during the pre-ictal and ictal periods in three seizures, as well as the postictal windows in four seizures. The preferred phase at which cfPAC occurred differed 1) in space, between the thalami of the epileptogenic and nonepileptogenic hemispheres; and 2) in time, at seizure termination. The anterior thalamic nucleus of the epileptogenic hemisphere also exhibited altered interregional phase-locking synchrony concurrent with the expression of cfPAC. By analyzing extraoperative recordings from the anterior thalamic nuclei, we show that cfPAC associated with altered interregional phase synchrony is lateralized to the thalamus of the epileptogenic hemisphere during seizures. Electrophysiological differences in cfPAC, including preferred phase of oscillatory interactions may be further investigated as putative targets for individualized neuromodulation paradigms in patients with drug-resistant epilepsy. NEW & NOTEWORTHY The association between fast brain activity and slower oscillations is an integral mechanism for hierarchical neuronal communication, which is also manifested in epileptogenic cortex. Our data suggest that the same phenomenon occurs in the anterior thalamic nuclei during seizures. Further, the preferred phase of modulation shows differences in space, between the epileptogenic and nonepileptogenic hemispheres and time, as seizures terminate. Our data encourage the study of cross-frequency coupling for targeted, individualized closed-loop stimulation paradigms.
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Affiliation(s)
- George M. Ibrahim
- Division of Neurosurgery, Department of Surgery, University of Toronto, Toronto, Ontario, Canada
| | - Simeon Wong
- Department of Diagnostic Imaging, The Hospital for Sick Children, Toronto, Ontario, Canada
| | - Benjamin R. Morgan
- Department of Diagnostic Imaging, The Hospital for Sick Children, Toronto, Ontario, Canada
| | - Nir Lipsman
- Division of Neurosurgery, Department of Surgery, University of Toronto, Toronto, Ontario, Canada
| | - Aria Fallah
- Department of Neurosurgery, Mattel Children’s Hospital, David Geffen School of Medicine at University of California Los Angeles, Los Angeles, California
| | - Alexander G. Weil
- Division of Pediatric Neurosurgery, Department of Surgery, Sainte Justine Hospital, University of Montreal, Montreal, Quebec, Canada
| | - Vibhor Krishna
- The Ohio State University, Center for Neuromodulation, Department of Neurosurgery, Columbus, Ohio
- The Ohio State University, Department of Neuroscience, Columbus, Ohio
| | - Richard A. Wennberg
- Division of Neurology, Krembil Neuroscience Centre, Toronto Western Hospital, University of Toronto, Toronto, Ontario, Canada
| | - Andres A. Lozano
- Division of Neurosurgery, Department of Surgery, University of Toronto, Toronto, Ontario, Canada
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A Novel Multivariate Sample Entropy Algorithm for Modeling Time Series Synchronization. ENTROPY 2018; 20:e20020082. [PMID: 33265173 PMCID: PMC7512644 DOI: 10.3390/e20020082] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/29/2017] [Revised: 01/15/2018] [Accepted: 01/19/2018] [Indexed: 12/03/2022]
Abstract
Approximate and sample entropy (AE and SE) provide robust measures of the deterministic or stochastic content of a time series (regularity), as well as the degree of structural richness (complexity), through operations at multiple data scales. Despite the success of the univariate algorithms, multivariate sample entropy (mSE) algorithms are still in their infancy and have considerable shortcomings. Not only are existing mSE algorithms unable to analyse within- and cross-channel dynamics, they can counter-intuitively interpret increased correlation between variates as decreased regularity. To this end, we first revisit the embedding of multivariate delay vectors (DVs), critical to ensuring physically meaningful and accurate analysis. We next propose a novel mSE algorithm and demonstrate its improved performance over existing work, for synthetic data and for classifying wake and sleep states from real-world physiological data. It is furthermore revealed that, unlike other tools, such as the correlation of phase synchrony, synchronized regularity dynamics are uniquely identified via mSE analysis. In addition, a model for the operation of this novel algorithm in the presence of white Gaussian noise is presented, which, in contrast to the existing algorithms, reveals for the first time that increasing correlation between different variates reduces entropy.
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Fan H, Wang Y, Wang H, Lai YC, Wang X. Autapses promote synchronization in neuronal networks. Sci Rep 2018; 8:580. [PMID: 29330551 PMCID: PMC5766500 DOI: 10.1038/s41598-017-19028-9] [Citation(s) in RCA: 17] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/12/2017] [Accepted: 12/20/2017] [Indexed: 11/09/2022] Open
Abstract
Neurological disorders such as epileptic seizures are believed to be caused by neuronal synchrony. However, to ascertain the causal role of neuronal synchronization in such diseases through the traditional approach of electrophysiological data analysis remains a controversial, challenging, and outstanding problem. We offer an alternative principle to assess the physiological role of neuronal synchrony based on identifying structural anomalies in the underlying network and studying their impacts on the collective dynamics. In particular, we focus on autapses - time delayed self-feedback links that exist on a small fraction of neurons in the network, and investigate their impacts on network synchronization through a detailed stability analysis. Our main finding is that the proper placement of a small number of autapses in the network can promote synchronization significantly, providing the computational and theoretical bases for hypothesizing a high degree of synchrony in real neuronal networks with autapses. Our result that autapses, the shortest possible links in any network, can effectively modulate the collective dynamics provides also a viable strategy for optimal control of complex network dynamics at minimal cost.
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Affiliation(s)
- Huawei Fan
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an, 710062, China
| | - Yafeng Wang
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an, 710062, China
| | - Hengtong Wang
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an, 710062, China
| | - Ying-Cheng Lai
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an, 710062, China.,School of Electrical, Computer, and Energy Engineering, Arizona State University, Tempe, Arizona, 85287, USA
| | - Xingang Wang
- School of Physics and Information Technology, Shaanxi Normal University, Xi'an, 710062, China.
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Sameni R, Seraj E. A robust statistical framework for instantaneous electroencephalogram phase and frequency estimation and analysis. Physiol Meas 2017; 38:2141-2163. [PMID: 29034902 DOI: 10.1088/1361-6579/aa93a1] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.6] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
Abstract
OBJECTIVE The instantaneous phase (IP) and instantaneous frequency (IF) of the electroencephalogram (EEG) are considered as notable complements for the EEG spectrum. The calculation of these parameters commonly includes narrow-band filtering, followed by the calculation of the signal's analytical form. The calculation of the IP and IF is highly susceptible to the filter parameters and background noise level, especially in low analytical signal amplitudes. The objective of this study is to propose a robust statistical framework for EEG IP/IF estimation and analysis. APPROACH Herein, a Monte Carlo estimation scheme is proposed for the robust estimation of the EEG IP and IF. It is proposed that any EEG phase-related inference should be reported as an average with confidence intervals obtained by repeating the IP and IF estimation under infinitesimal variations (selected by an expert), in algorithmic parameters such as the filter's bandwidth, center frequency and background noise level. In the second part of the paper, a stochastic model consisting of the superposition of narrow-band foreground and background EEG is used to derive analytically probability density functions of the instantaneous envelope (IE) and IP of EEG signals, which justify the proposed Monte Carlo scheme. MAIN RESULTS The instantaneous analytical envelope of the EEG, which has been empirically used in previous studies, is shown to have a fundamental impact on the accuracy of the EEG phase contents. It is rigorously shown that the IP/IF estimation quality highly depends on the IE and any phase/frequency interpretations in low IE are statistically unreliable and require a hypothesis test. SIGNIFICANCE The impact of the proposed method on previous studies, including time-domain phase synchrony, phase resetting, phase locking value and phase amplitude coupling are studied with examples. The findings of this research can set forth new standards for EEG phase/frequency estimation and analysis techniques.
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Kassiri H, Tonekaboni S, Salam MT, Soltani N, Abdelhalim K, Velazquez JLP, Genov R. Closed-Loop Neurostimulators: A Survey and A Seizure-Predicting Design Example for Intractable Epilepsy Treatment. IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS 2017; 11:1026-1040. [PMID: 28715338 DOI: 10.1109/tbcas.2017.2694638] [Citation(s) in RCA: 29] [Impact Index Per Article: 3.6] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/21/2023]
Abstract
First, existing commercially available open-loop and closed-loop implantable neurostimulators are reviewed and compared in terms of their targeted application, physical size, system-level features, and performance as a medical device. Next, signal processing algorithms as the primary strength point of the closed-loop neurostimulators are reviewed, and various design and implementation requirements and trade-offs are discussed in details along with quantitative examples. The review results in a set of guidelines for algorithm selection and evaluation. Second, the implementation of an inductively-powered seizure-predicting microsystem for monitoring and treatment of intractable epilepsy is presented. The miniaturized system is comprised of two miniboards and a power receiver coil. The first board hosts a 24-channel neurostimulator system on chip fabricated in a [Formula: see text] CMOS technology and performs neural recording, on-chip digital signal processing, and electrical stimulation. The second board communicates recorded brain signals as well as signal processing results wirelessly. The multilayer flexible coil receives inductively-transmitted power. The system is sized at 2 × 2 × 0.7 [Formula: see text] and weighs 6 g. The approach is validated in the control of chronic seizures in vivo in freely moving rats.
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37
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Lainscsek C, Weyhenmeyer J, Cash SS, Sejnowski TJ. Delay Differential Analysis of Seizures in Multichannel Electrocorticography Data. Neural Comput 2017; 29:3181-3218. [PMID: 28777720 DOI: 10.1162/neco_a_01009] [Citation(s) in RCA: 10] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/04/2022]
Abstract
High-density electrocorticogram (ECoG) electrodes are capable of recording neurophysiological data with high temporal resolution with wide spatial coverage. These recordings are a window to understanding how the human brain processes information and subsequently behaves in healthy and pathologic states. Here, we describe and implement delay differential analysis (DDA) for the characterization of ECoG data obtained from human patients with intractable epilepsy. DDA is a time-domain analysis framework based on embedding theory in nonlinear dynamics that reveals the nonlinear invariant properties of an unknown dynamical system. The DDA embedding serves as a low-dimensional nonlinear dynamical basis onto which the data are mapped. This greatly reduces the risk of overfitting and improves the method's ability to fit classes of data. Since the basis is built on the dynamical structure of the data, preprocessing of the data (e.g., filtering) is not necessary. We performed a large-scale search for a DDA model that best fit ECoG recordings using a genetic algorithm to qualitatively discriminate between different cortical states and epileptic events for a set of 13 patients. A single DDA model with only three polynomial terms was identified. Singular value decomposition across the feature space of the model revealed both global and local dynamics that could differentiate electrographic and electroclinical seizures and provided insights into highly localized seizure onsets and diffuse seizure terminations. Other common ECoG features such as interictal periods, artifacts, and exogenous stimuli were also analyzed with DDA. This novel framework for signal processing of seizure information demonstrates an ability to reveal unique characteristics of the underlying dynamics of the seizure and may be useful in better understanding, detecting, and maybe even predicting seizures.
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Affiliation(s)
- Claudia Lainscsek
- Howard Hughes Medical Institute, Computational Neurobiology Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, U.S.A., and Institute for Neural Computation, University of California San Diego, La Jolla, CA 92093, U.S.A.
| | - Jonathan Weyhenmeyer
- Goodman Campbell Brain and Spine, Department of Neurological Surgery, Indiana University School of Medicine, Indianapolis, IN 46202, U.S.A.
| | - Sydney S Cash
- Department of Neurology, Massachusetts General Hospital and Harvard Medical School, Boston, MA 02114, U.S.A.
| | - Terrence J Sejnowski
- Howard Hughes Medical Institute, Computational Neurobiology Laboratory, Salk Institute for Biological Studies, La Jolla, CA 92037, U.S.A., and Institute for Neural Computation, University of California San Diego, La Jolla, CA 92093, U.S.A.
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Reimbayev R, Daley K, Belykh I. When two wrongs make a right: synchronized neuronal bursting from combined electrical and inhibitory coupling. PHILOSOPHICAL TRANSACTIONS. SERIES A, MATHEMATICAL, PHYSICAL, AND ENGINEERING SCIENCES 2017; 375:rsta.2016.0282. [PMID: 28507227 PMCID: PMC5434073 DOI: 10.1098/rsta.2016.0282] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Accepted: 03/08/2017] [Indexed: 05/24/2023]
Abstract
Synchronized cortical activities in the central nervous systems of mammals are crucial for sensory perception, coordination and locomotory function. The neuronal mechanisms that generate synchronous synaptic inputs in the neocortex are far from being fully understood. In this paper, we study the emergence of synchronization in networks of bursting neurons as a highly non-trivial, combined effect of electrical and inhibitory connections. We report a counterintuitive find that combined electrical and inhibitory coupling can synergistically induce robust synchronization in a range of parameters where electrical coupling alone promotes anti-phase spiking and inhibition induces anti-phase bursting. We reveal the underlying mechanism, which uses a balance between hidden properties of electrical and inhibitory coupling to act together to synchronize neuronal bursting. We show that this balance is controlled by the duty cycle of the self-coupled system which governs the synchronized bursting rhythm.This article is part of the themed issue 'Mathematical methods in medicine: neuroscience, cardiology and pathology'.
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Affiliation(s)
- Reimbay Reimbayev
- Department of Mathematics and Statistics and Neuroscience Institute, Georgia State University, 30 Pryor Street, Atlanta, GA 30303, USA
| | - Kevin Daley
- Department of Mathematics and Statistics and Neuroscience Institute, Georgia State University, 30 Pryor Street, Atlanta, GA 30303, USA
| | - Igor Belykh
- Department of Mathematics and Statistics and Neuroscience Institute, Georgia State University, 30 Pryor Street, Atlanta, GA 30303, USA
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Meyers JL, Zhang J, Manz N, Rangaswamy M, Kamarajan C, Wetherill L, Chorlian DB, Kang SJ, Bauer L, Hesselbrock V, Kramer J, Kuperman S, Nurnberger JI, Tischfield J, Wang JC, Edenberg HJ, Goate A, Foroud T, Porjesz B. A genome wide association study of fast beta EEG in families of European ancestry. Int J Psychophysiol 2017; 115:74-85. [PMID: 28040410 PMCID: PMC5426060 DOI: 10.1016/j.ijpsycho.2016.12.008] [Citation(s) in RCA: 8] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2015] [Revised: 12/08/2016] [Accepted: 12/15/2016] [Indexed: 11/25/2022]
Abstract
BACKGROUND Differences in fast beta (20-28Hz) electroencephalogram (EEG) oscillatory activity distinguish some individuals with psychiatric and substance use disorders, suggesting that it may be a useful endophenotype for studying the genetics of disorders characterized by neural hyper-excitability. Despite the high heritability estimates provided by twin and family studies, there have been relatively few genetic studies of beta EEG, and to date only one genetic association finding has replicated (i.e., GABRA2). METHOD In a sample of 1564 individuals from 117 families of European Ancestry (EA) drawn from the Collaborative Study on the Genetics of Alcoholism (COGA), we performed a Genome-Wide Association Study (GWAS) on resting-state fronto-central fast beta EEG power, adjusting regression models for family relatedness, age, sex, and ancestry. To further characterize genetic findings, we examined the functional and behavioral significance of GWAS findings. RESULTS Three intronic variants located within DSE (dermatan sulfate epimerase) on 6q22 were associated with fast beta EEG at a genome wide significant level (p<5×10-8). The most significant SNP was rs2252790 (p<2.6×10-8; MAF=0.36; β=0.135). rs2252790 is an eQTL for ROS1 expressed most robustly in the temporal cortex (p=1.2×10-6) and for DSE/TSPYL4 expressed most robustly in the hippocampus (p=7.3×10-4; β=0.29). Previous studies have indicated that DSE is involved in a network of genes integral to membrane organization; gene-based tests indicated that several variants within this network (i.e., DSE, ZEB2, RND3, MCTP1, and CTBP2) were also associated with beta EEG (empirical p<0.05), and of these genes, ZEB2 and CTBP2 were associated with DSM-V Alcohol Use Disorder (AUD; empirical p<0.05).' DISCUSSION In this sample of EA families enriched for AUDs, fast beta EEG is associated with variants within DSE on 6q22; the most significant SNP influences the mRNA expression of DSE and ROS1 in hippocampus and temporal cortex, brain regions important for beta EEG activity. Gene-based tests suggest evidence of association with related genes, ZEB2, RND3, MCTP1, CTBP2, and beta EEG. Converging data from GWAS, gene expression, and gene-networks presented in this study provide support for the role of genetic variants within DSE and related genes in neural hyperexcitability, and has highlighted two potential candidate genes for AUD and/or related neurological conditions: ZEB2 and CTBP2. However, results must be replicated in large, independent samples.
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Affiliation(s)
- Jacquelyn L Meyers
- Henri Begleiter Neurodynamics Laboratory, Department of Psychiatry and Behavioral Sciences, SUNY Downstate Medical Center, Brooklyn, NY, USA.
| | - Jian Zhang
- Henri Begleiter Neurodynamics Laboratory, Department of Psychiatry and Behavioral Sciences, SUNY Downstate Medical Center, Brooklyn, NY, USA
| | - Niklas Manz
- Henri Begleiter Neurodynamics Laboratory, Department of Psychiatry and Behavioral Sciences, SUNY Downstate Medical Center, Brooklyn, NY, USA; Department of Physics, College of Wooster, Wooster, OH, USA
| | | | - Chella Kamarajan
- Henri Begleiter Neurodynamics Laboratory, Department of Psychiatry and Behavioral Sciences, SUNY Downstate Medical Center, Brooklyn, NY, USA
| | - Leah Wetherill
- Department of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, IN, USA
| | - David B Chorlian
- Henri Begleiter Neurodynamics Laboratory, Department of Psychiatry and Behavioral Sciences, SUNY Downstate Medical Center, Brooklyn, NY, USA
| | - Sun J Kang
- Albany Stratton VA Medical Center, Albany, NY, USA
| | - Lance Bauer
- University of Connecticut School of Medicine, Farmington, CT, USA
| | | | - John Kramer
- Department of Psychiatry, University of Iowa, Iowa City, IA, USA
| | - Samuel Kuperman
- Department of Psychiatry, University of Iowa, Iowa City, IA, USA
| | - John I Nurnberger
- Department of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, IN, USA
| | | | | | - Howard J Edenberg
- Department of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, IN, USA; Department of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN, USA
| | - Alison Goate
- Icahn School of Medicine at Mt. Sinai, New York, NY, USA
| | - Tatiana Foroud
- Department of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, IN, USA
| | - Bernice Porjesz
- Henri Begleiter Neurodynamics Laboratory, Department of Psychiatry and Behavioral Sciences, SUNY Downstate Medical Center, Brooklyn, NY, USA
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Campana C, Zubler F, Gibbs S, de Carli F, Proserpio P, Rubino A, Cossu M, Tassi L, Schindler K, Nobili L. Suppression of interictal spikes during phasic rapid eye movement sleep: a quantitative stereo-electroencephalography study. J Sleep Res 2017; 26:606-613. [DOI: 10.1111/jsr.12533] [Citation(s) in RCA: 26] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/11/2017] [Accepted: 03/01/2017] [Indexed: 12/20/2022]
Affiliation(s)
- C. Campana
- ’C. Munari’ Epilepsy Surgery Centre; Niguarda Hospital; Milan Italy
- Department of Biomedical and Clinical Sciences ‘Luigi Sacco’; University of Milan; Milan Italy
| | - F. Zubler
- ’C. Munari’ Epilepsy Surgery Centre; Niguarda Hospital; Milan Italy
| | - S. Gibbs
- ’C. Munari’ Epilepsy Surgery Centre; Niguarda Hospital; Milan Italy
- Center for Advanced Research in Sleep Medicine; University of Montreal; Montreal Canada
| | - F. de Carli
- Institute of Bioimaging and Molecular Physiology; Genoa Section; National Research Council; Genoa Italy
| | - P. Proserpio
- ’C. Munari’ Epilepsy Surgery Centre; Niguarda Hospital; Milan Italy
| | - A. Rubino
- ’C. Munari’ Epilepsy Surgery Centre; Niguarda Hospital; Milan Italy
- Department of Biomedical and Clinical Sciences ‘Luigi Sacco’; University of Milan; Milan Italy
| | - M. Cossu
- ’C. Munari’ Epilepsy Surgery Centre; Niguarda Hospital; Milan Italy
| | - L. Tassi
- ’C. Munari’ Epilepsy Surgery Centre; Niguarda Hospital; Milan Italy
| | - K. Schindler
- Department of Neurology; Inselspital; Bern University Hospital; University of Bern; Bern Switzerland
| | - L. Nobili
- ’C. Munari’ Epilepsy Surgery Centre; Niguarda Hospital; Milan Italy
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41
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Human seizures couple across spatial scales through travelling wave dynamics. Nat Commun 2017; 8:14896. [PMID: 28374740 PMCID: PMC5382286 DOI: 10.1038/ncomms14896] [Citation(s) in RCA: 68] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2016] [Accepted: 02/08/2017] [Indexed: 11/21/2022] Open
Abstract
Epilepsy—the propensity toward recurrent, unprovoked seizures—is a devastating disease affecting 65 million people worldwide. Understanding and treating this disease remains a challenge, as seizures manifest through mechanisms and features that span spatial and temporal scales. Here we address this challenge through the analysis and modelling of human brain voltage activity recorded simultaneously across microscopic and macroscopic spatial scales. We show that during seizure large-scale neural populations spanning centimetres of cortex coordinate with small neural groups spanning cortical columns, and provide evidence that rapidly propagating waves of activity underlie this increased inter-scale coupling. We develop a corresponding computational model to propose specific mechanisms—namely, the effects of an increased extracellular potassium concentration diffusing in space—that support the observed spatiotemporal dynamics. Understanding the multi-scale, spatiotemporal dynamics of human seizures—and connecting these dynamics to specific biological mechanisms—promises new insights to treat this devastating disease. The authors record both local and long-range neural activity during human epileptic seizures to study the underlying multi-scale dynamics. They find that coupling of activity across spatial scales increases during seizures through propagating waves that are fit by a model that combines neural activity and potassium concentration dynamics.
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Kopal J, Vyšata O, Burian J, Schätz M, Procházka A, Vališ M. EEG Synchronizations Length During Meditation. J Med Biol Eng 2017. [DOI: 10.1007/s40846-017-0219-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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Valentín A, Selway RP, Amarouche M, Mundil N, Ughratdar I, Ayoubian L, Martín-López D, Kazi F, Dar T, Jiménez-Jiménez D, Hughes E, Alarcón G. Intracranial stimulation for children with epilepsy. Eur J Paediatr Neurol 2017; 21:223-231. [PMID: 27840024 DOI: 10.1016/j.ejpn.2016.10.011] [Citation(s) in RCA: 31] [Impact Index Per Article: 3.9] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 06/01/2016] [Revised: 10/19/2016] [Accepted: 10/24/2016] [Indexed: 01/31/2023]
Abstract
OBJECTIVES To evaluate the efficacy of intracranial stimulation to treat refractory epilepsy in children. METHODS This is a retrospective analysis of a pilot study on all 8 children who had intracranial electrical stimulation for the investigation and treatment of refractory epilepsy at King's College Hospital between 2014 and 2015. Five children (one with temporal lobe epilepsy and four with frontal lobe epilepsy) had subacute cortical stimulation (SCS) for a period of 20-161 h during intracranial video-telemetry. Efficacy of stimulation was evaluated by counting interictal discharges and seizures. Two children had thalamic deep brain stimulation (DBS) of the centromedian nucleus (one with idiopathic generalized epilepsy, one with presumed symptomatic generalized epilepsy), and one child on the anterior nucleus (right fronto-temporal epilepsy). The incidence of interictal discharges was evaluated visually and quantified automatically. RESULTS Among the three children with DBS, two had >60% improvement in seizure frequency and severity and one had no improvement. Among the five children with SCS, four showed improvement in seizure frequency (>50%) and one chid did not show improvement. Procedures were well tolerated by children. CONCLUSION Cortical and thalamic stimulation appear to be effective and well tolerated in children with refractory epilepsy. SCS can be used to identify the focus and predict the effects of resective surgery or chronic cortical stimulation. Further larger studies are necessary.
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Affiliation(s)
- Antonio Valentín
- Department of Basic and Clinical Neuroscience, Institute of Psychiatry, Psychology and Neuroscience, King's College London, UK; Department of Clinical Neurophysiology, King's College Hospital NHS Trust, London, UK.
| | - Richard P Selway
- Department of Neurosurgery, King's College Hospital NHS Trust, London, UK
| | - Meriem Amarouche
- Department of Neurosurgery, King's College Hospital NHS Trust, London, UK
| | - Nilesh Mundil
- Department of Neurosurgery, King's College Hospital NHS Trust, London, UK
| | - Ismail Ughratdar
- Department of Neurosurgery, King's College Hospital NHS Trust, London, UK
| | - Leila Ayoubian
- Department of Basic and Clinical Neuroscience, Institute of Psychiatry, Psychology and Neuroscience, King's College London, UK
| | - David Martín-López
- Department of Basic and Clinical Neuroscience, Institute of Psychiatry, Psychology and Neuroscience, King's College London, UK; Department of Clinical Neurophysiology, Kingston Hospital NHS FT, London, UK; Departamento de Fisiología, Facultad de Medicina, Universidad Complutense, Madrid, Spain
| | - Farhana Kazi
- Department of Clinical Neurophysiology, King's College Hospital NHS Trust, London, UK
| | - Talib Dar
- Department of Basic and Clinical Neuroscience, Institute of Psychiatry, Psychology and Neuroscience, King's College London, UK
| | - Diego Jiménez-Jiménez
- Department of Basic and Clinical Neuroscience, Institute of Psychiatry, Psychology and Neuroscience, King's College London, UK; Department of Clinical Neurophysiology, King's College Hospital NHS Trust, London, UK; School of Medicine, Universidad San Francisco de Quito, Quito, Ecuador
| | - Elaine Hughes
- Department of Paediatric Neurosciences, King's College Hospital NHS Trust, London, UK; Department of Paediatric Neurology, Evelina Children's Hospital, London, UK
| | - Gonzalo Alarcón
- Department of Basic and Clinical Neuroscience, Institute of Psychiatry, Psychology and Neuroscience, King's College London, UK; Department of Clinical Neurophysiology, King's College Hospital NHS Trust, London, UK; Departamento de Fisiología, Facultad de Medicina, Universidad Complutense, Madrid, Spain; Comprehensive Epilepsy Center, Neuroscience Institute, Academic Health Systems Hamad Medical Corporation, Doha, Qatar
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High frequency spectral changes induced by single-pulse electric stimulation: Comparison between physiologic and pathologic networks. Clin Neurophysiol 2016; 128:1053-1060. [PMID: 28131532 DOI: 10.1016/j.clinph.2016.12.016] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/11/2016] [Revised: 12/05/2016] [Accepted: 12/15/2016] [Indexed: 01/09/2023]
Abstract
OBJECTIVE To investigate functional coupling between brain networks using spectral changes induced by single-pulse electric stimulation (SPES). METHOD We analyzed 20 patients with focal epilepsy, implanted with depth electrodes. SPES was applied to each pair of adjacent contacts, and responses were recorded from all other contacts. The mean response amplitude value was quantified in three time-periods after stimulation (10-60, 60-255, 255-500ms) for three frequency-ranges (Gamma, Ripples, Fast-Ripples), and compared to baseline. A total of 30,755 responses were analyzed, taking into consideration three dichotomous pairs: stimulating in primary sensory areas (S1-V1) vs. outside them, to test the interaction in physiologic networks; stimulating in seizure onset zone (SOZ) vs. non-SOZ, to test pathologic interactions; recording in default mode network (DMN) vs. non-DMN. RESULTS Overall, we observed an early excitation (10-60ms) and a delayed inhibition (60-500ms). More specifically, in the delayed period, stimulation in S1-V1 produced a higher gamma-inhibition in the DMN, while stimulation in the SOZ induced a higher inhibition in the epilepsy-related higher frequencies (Ripples and Fast-Ripples). CONCLUSION Physiologic and pathologic interactions can be assessed using spectral changes induced by SPES. SIGNIFICANCE This is a promising method for connectivity studies in patients with drug-resistant focal epilepsy.
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Belykh IV, Brister BN, Belykh VN. Bistability of patterns of synchrony in Kuramoto oscillators with inertia. CHAOS (WOODBURY, N.Y.) 2016; 26:094822. [PMID: 27781476 DOI: 10.1063/1.4961435] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/06/2023]
Abstract
We study the co-existence of stable patterns of synchrony in two coupled populations of identical Kuramoto oscillators with inertia. The two populations have different sizes and can split into two clusters where the oscillators synchronize within a cluster while there is a phase shift between the dynamics of the two clusters. Due to the presence of inertia, which increases the dimensionality of the oscillator dynamics, this phase shift can oscillate, inducing a breathing cluster pattern. We derive analytical conditions for the co-existence of stable two-cluster patterns with constant and oscillating phase shifts. We demonstrate that the dynamics, that governs the bistability of the phase shifts, is described by a driven pendulum equation. We also discuss the implications of our stability results to the stability of chimeras.
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Affiliation(s)
- Igor V Belykh
- Department of Mathematics and Statistics and Neuroscience Institute, Georgia State University, 30 Pryor Street, Atlanta, Georgia 30303, USA
| | - Barrett N Brister
- Department of Mathematics and Statistics and Neuroscience Institute, Georgia State University, 30 Pryor Street, Atlanta, Georgia 30303, USA
| | - Vladimir N Belykh
- Department of Control Theory, Lobachevsky State University of Nizhny Novgorod, 23, Gagarin Ave., 603950 Nizhny Novgorod, Russia
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Amiri M, Frauscher B, Gotman J. Phase-Amplitude Coupling Is Elevated in Deep Sleep and in the Onset Zone of Focal Epileptic Seizures. Front Hum Neurosci 2016; 10:387. [PMID: 27536227 PMCID: PMC4971106 DOI: 10.3389/fnhum.2016.00387] [Citation(s) in RCA: 58] [Impact Index Per Article: 6.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/19/2016] [Accepted: 07/18/2016] [Indexed: 12/13/2022] Open
Abstract
The interactions between different EEG frequency bands have been widely investigated in normal and pathologic brain activity. Phase-amplitude coupling (PAC) is one of the important forms of this interaction where the amplitude of higher frequency oscillations is modulated by the phase of lower frequency activity. Here, we studied the dynamic variations of PAC of high (gamma and ripple) and low (delta, theta, alpha, and beta) frequency bands in patients with focal epilepsy in different sleep stages during the interictal period, in an attempt to see if coupling is different in more or less epileptogenic regions. Sharp activities were excluded to avoid their effect on the PAC. The results revealed that the coupling intensity was generally the highest in stage N3 of sleep and the lowest in rapid eye movement sleep. We also compared the coupling strength in different regions [seizure onset zone (SOZ), exclusively irritative zone, and normal zone]. PAC between high and low frequency rhythms was found to be significantly stronger in the SOZ compared to normal regions. Also, the coupling was generally more elevated in spiking channels outside the SOZ than in normal regions. We also examined how the power in the delta band correlates to the PAC, and found a mild but statistically significant correlation between slower background activity in epileptic channels and the elevated coupling in these channels. The results suggest that an elevated PAC may reflect some fundamental abnormality, even after exclusion of sharp activities and even in the interictal period. PAC may therefore contribute to understanding the underlying dynamics of epileptogenic brain regions.
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Affiliation(s)
- Mina Amiri
- Montreal Neurological Institute, McGill University, Montreal QC, Canada
| | - Birgit Frauscher
- Montreal Neurological Institute, McGill University, MontrealQC, Canada; Department of Medicine and Center for Neuroscience Studies, Queen's University, KingstonON, Canada
| | - Jean Gotman
- Montreal Neurological Institute, McGill University, Montreal QC, Canada
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Gliske SV, Stacey WC, Lim E, Holman KA, Fink CG. Emergence of Narrowband High Frequency Oscillations from Asynchronous, Uncoupled Neural Firing. Int J Neural Syst 2016; 27:1650049. [PMID: 27712456 DOI: 10.1142/s0129065716500490] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.2] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/18/2022]
Abstract
Previous experimental studies have demonstrated the emergence of narrowband local field potential oscillations during epileptic seizures in which the underlying neural activity appears to be completely asynchronous. We derive a mathematical model explaining how this counterintuitive phenomenon may occur, showing that a population of independent, completely asynchronous neurons may produce narrowband oscillations if each neuron fires quasi-periodically, without requiring any intrinsic oscillatory cells or feedback inhibition. This quasi-periodicity can occur through cells with similar frequency-current ([Formula: see text]-[Formula: see text]) curves receiving a similar, high amount of uncorrelated synaptic noise. Thus, this source of oscillatory behavior is distinct from the usual cases (pacemaker cells entraining a network, or oscillations being an inherent property of the network structure), as it requires no oscillatory drive nor any specific network or cellular properties other than cells that repetitively fire with continual stimulus. We also deduce bounds on the degree of variability in neural spike-timing which will permit the emergence of such oscillations, both for action potential- and postsynaptic potential-dominated LFPs. These results suggest that even an uncoupled network may generate collective rhythms, implying that the breakdown of inhibition and high synaptic input often observed during epileptic seizures may generate narrowband oscillations. We propose that this mechanism may explain why so many disparate epileptic and normal brain mechanisms can produce similar high frequency oscillations.
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Affiliation(s)
- Stephen V Gliske
- 1 Department of Neurology, University of Michigan, 1500 E. Medical Center Drive, Ann Arbor, MI 48109, USA
| | - William C Stacey
- 2 Departments of Biomedical Engineering and Neurology, University of Michigan, 1500 E. Medical Center Drive, Ann Arbor, MI 48109, USA
| | - Eugene Lim
- 3 Department of Physics, Ohio Wesleyan University, 61 S. Sandusky St., Delaware, OH 43015, USA
| | - Katherine A Holman
- 4 Department of Physics, Towson University, 8000 York Road, Towson, MD 21252, USA
| | - Christian G Fink
- 5 Department of Physics and Neuroscience Program, Ohio Wesleyan University, 61 S. Sandusky St., Delaware, OH 43015, USA
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Trevelyan AJ. Do Cortical Circuits Need Protecting from Themselves? Trends Neurosci 2016; 39:502-511. [PMID: 27378547 DOI: 10.1016/j.tins.2016.06.002] [Citation(s) in RCA: 18] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/06/2016] [Revised: 05/09/2016] [Accepted: 06/09/2016] [Indexed: 01/27/2023]
Abstract
All hippocampal and neocortical networks can be driven to seize quite easily. This can be done using drugs, by altering the ionic constituency of the bathing medium [cerebrospinal fluid (CSF)], or by electrical stimulation (both experimentally and clinically, as in electroconvulsive therapy). It is worth asking why this is so, because this will both tell us more about potentially devastating neurological disorders and extend our understanding of cortical function and architecture. Here I review work examining the features of cortical networks that bias activity towards and away from hyperexcitability. I suggest that several cellular- and circuit-level features of rapidly responsive interneuron networks tip the balance away from seizure in the healthy brain.
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Affiliation(s)
- Andrew J Trevelyan
- Institute of Neuroscience, Medical School, Framlington Place, Newcastle upon Tyne NE2 4HH, UK.
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Wong SM, Ibrahim GM, Ochi A, Otsubo H, Rutka JT, Snead OC, Doesburg SM. moviEEG: An animation toolbox for visualization of intracranial electroencephalography synchronization dynamics. Clin Neurophysiol 2016; 127:2370-8. [PMID: 27178855 DOI: 10.1016/j.clinph.2016.03.001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/30/2015] [Revised: 03/01/2016] [Accepted: 03/03/2016] [Indexed: 11/29/2022]
Abstract
OBJECTIVE We introduce and describe the functions of moviEEG (Multiple Overlay Visualizations for Intracranial ElectroEncephaloGraphy), a novel MATLAB-based toolbox for spatiotemporal mapping of network synchronization dynamics in intracranial electroencephalography (iEEG) data. METHODS The toolbox integrates visualizations of inter-electrode phase-locking relationships in peri-ictal epileptogenic networks with signal spectral properties and graph-theoretical network measures overlaid upon operating room images of the electrode grid. Functional connectivity between every electrode pair is evaluated over a sliding window indexed by phase synchrony. RESULTS Two case studies are presented to provide preliminary evidence for the application of the toolbox to guide network-based mapping of epileptogenic cortex and to distinguish these regions from eloquent brain networks. In both cases, epileptogenic cortex was visually distinct. CONCLUSION We introduce moviEEG, a novel toolbox for animation of oscillatory network dynamics in iEEG data, and provide two case studies showing preliminary evidence for utility of the toolbox in delineating the epileptogenic zone. SIGNIFICANCE Despite evidence that atypical network synchronization has shown to be altered in epileptogenic brain regions, network based techniques have yet to be incorporated into clinical pre-surgical mapping. moviEEG provides a set of functions to enable easy visualization with network based techniques.
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Affiliation(s)
- Simeon M Wong
- Faculty of Applied Science and Engineering, University of Toronto, Canada; Neuroscience & Mental Health Program, Hospital for Sick Children Research Institute, Canada; Department of Diagnostic Imaging, Hospital for Sick Children, Canada.
| | - George M Ibrahim
- Division of Neurosurgery, Hospital for Sick Children, Canada; Institute of Medical Science, University of Toronto, Canada
| | - Ayako Ochi
- Division of Neurology, Hospital for Sick Children, Canada
| | - Hiroshi Otsubo
- Division of Neurology, Hospital for Sick Children, Canada
| | - James T Rutka
- Division of Neurosurgery, Hospital for Sick Children, Canada
| | - O Carter Snead
- Neuroscience & Mental Health Program, Hospital for Sick Children Research Institute, Canada; Institute of Medical Science, University of Toronto, Canada; Division of Neurology, Hospital for Sick Children, Canada
| | - Sam M Doesburg
- Department of Biomedical Physiology and Kinesiology, Simon Fraser University, Canada
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Knudstrup S, Zochowski M, Booth V. Network burst dynamics under heterogeneous cholinergic modulation of neural firing properties and heterogeneous synaptic connectivity. Eur J Neurosci 2016; 43:1321-39. [PMID: 26869313 DOI: 10.1111/ejn.13210] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/06/2015] [Revised: 01/19/2016] [Accepted: 02/08/2016] [Indexed: 01/16/2023]
Abstract
The characteristics of neural network activity depend on intrinsic neural properties and synaptic connectivity in the network. In brain networks, both of these properties are critically affected by the type and levels of neuromodulators present. The expression of many of the most powerful neuromodulators, including acetylcholine (ACh), varies tonically and phasically with behavioural state, leading to dynamic, heterogeneous changes in intrinsic neural properties and synaptic connectivity properties. Namely, ACh significantly alters neural firing properties as measured by the phase response curve in a manner that has been shown to alter the propensity for network synchronization. The aim of this simulation study was to build an understanding of how heterogeneity in cholinergic modulation of neural firing properties and heterogeneity in synaptic connectivity affect the initiation and maintenance of synchronous network bursting in excitatory networks. We show that cells that display different levels of ACh modulation have differential roles in generating network activity: weakly modulated cells are necessary for burst initiation and provide synchronizing drive to the rest of the network, whereas strongly modulated cells provide the overall activity level necessary to sustain burst firing. By applying several quantitative measures of network activity, we further show that the existence of network bursting and its characteristics, such as burst duration and intraburst synchrony, are dependent on the fraction of cell types providing the synaptic connections in the network. These results suggest mechanisms underlying ACh modulation of brain oscillations and the modulation of seizure activity during sleep states.
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Affiliation(s)
- Scott Knudstrup
- Department of Mathematics, University of Michigan, 530 Church St, Ann Arbor, MI, 48109, USA
| | - Michal Zochowski
- Department of Physics and Biophysics Program, University of Michigan, 450 Church St, Ann Arbor, MI, 48109, USA
| | - Victoria Booth
- Department of Mathematics, University of Michigan, 530 Church St, Ann Arbor, MI, 48109, USA.,Department of Anesthesiology, University of Michigan, Ann Arbor, MI, USA
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