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Ray I, Misra S, Chen M, Wang X, Das R. Entrapment of atmospheric particle bound heavy metals by ferns as evidenced by lead (Pb) isotope and MixSIAR: Implications for improving air quality. JOURNAL OF HAZARDOUS MATERIALS 2024; 469:134014. [PMID: 38503208 DOI: 10.1016/j.jhazmat.2024.134014] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/04/2024] [Revised: 03/03/2024] [Accepted: 03/10/2024] [Indexed: 03/21/2024]
Abstract
Plant metal uptake can occur through both soil-root and atmospheric transfer from leaves. The latter holds potential implications for development of biofiltration systems. To explore this potential, it is crucial to understand entrapment capacity and metal sources within plants. As ferns absorb materials from atmosphere, this study focuses on two abundant fern species growing in densely populated and highly polluted regions of Eastern India. Gravimetric quantification, elemental concentration and Pb isotopic analyses were performed by segregating the ferns into distinct components: foliage dusts (loose dust (LD) and wax-bound dust (WD)) and plant tissue (leaves and roots). To understand metal sources, the study analyzes soil, and atmospheric particulates (PM10 and dust fall (DF)). Results indicate that, while LDs have soil dust influence, wax entraps atmospheric particulates and translocates them inside the leaves. Furthermore, roots demonstrate dissimilar isotopic ratios from soil, while displaying close association with atmospheric particulates. Isotopic composition and subsequent mixing model reveal dominant contribution from DF in leaves (53-73%) and roots (33-86%). Apart from DF, leaf Pb is sourced from PM10 (21-38%) with minimal contribution from soil (6-10%). Conversely, in addition to dominance from DF, roots source Pb primarily from soil (12-62%) with a meagre 2-8% contribution from PM10.
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Affiliation(s)
- Iravati Ray
- School of Environmental Studies, Jadavpur University, Kolkata, India.
| | - Sambuddha Misra
- Centre for Earth Sciences, Indian Institute of Sciences, Bangalore, India
| | - Mengli Chen
- Tropical Marine Science Institute, National University of Singapore, Singapore; Earth Observatory of Singapore, Nanyang Technological University, Singapore
| | - Xianfeng Wang
- Earth Observatory of Singapore, Nanyang Technological University, Singapore; Asian School of Environment, Nanyang Technological University, Singapore
| | - Reshmi Das
- School of Environmental Studies, Jadavpur University, Kolkata, India; Earth Observatory of Singapore, Nanyang Technological University, Singapore.
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Haydar MS, Kundu S, Kundu S, Mandal P, Roy S. Zinc oxide nano-flowers improve the growth and propagation of mulberry cuttings grown under different irrigation regimes by mitigating drought-related complications and enhancing zinc uptake. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2023; 202:107910. [PMID: 37531852 DOI: 10.1016/j.plaphy.2023.107910] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/11/2023] [Revised: 06/21/2023] [Accepted: 07/24/2023] [Indexed: 08/04/2023]
Abstract
Silkworm larvae mainly consume mulberry leaves; therefore, mulberry cultivation is important for the production of raw silk. Drought stress and micronutrient deficiency (Zn) are known to affect the propagation of mulberry cuttings. In this purview, the current investigation attempted to inspect the efficacy of different concentrations of zinc oxide nano-flower (ZnNFs) applied through both soil admixture and foliar spray on the propagation of mulberry cuttings grown under deficit irrigation regimes. The overall results demonstrated that the ZnNF-treated plant cuttings were well-adapted to drought stress and performed better in comparison to the control set. Out of the tested concentrations - ZnNF-10 (applied as 10 mg/kg soil and 10 ppm as foliar spray thrice) was found to be optimum, showing relatively better initial root establishment, the emergence of leaves, and survival and sprouting percentage. Further studies also confirmed an improvement in the accumulation of photosynthetic pigments, carbohydrates, and protein content even under extreme drought conditions. Most importantly, the ZnNF-10 treatment contributed to ROS detoxification and cell membrane protection by enhancing the pool of antioxidant enzymes. The study further demonstrated that ZnNF-10 application enhanced zinc content by 147.50%, 179.49%, and 171.99% in root, shoot, and leaves of the treated cuttings; thereby, improving the bioaccumulation factor of the plant parts. All of these interactive phenomena led to an increment in shoot height, biomass, leaf area, and leaf number of cuttings. These findings, therefore, indicated that ZnNFs can be developed as a promising nano-fertilizer for mulberry growth facilitating Zn uptake and mitigation of drought-induced complications.
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Affiliation(s)
- Md Salman Haydar
- Nanobiology and Phytotherapy Laboratory, Department of Botany, University of North Bengal, Siliguri, West Bengal, 734013, India; Plant Biochemistry Laboratory, Department of Botany, University of North Bengal, Siliguri, West Bengal, 734013, India.
| | - Sudipta Kundu
- Nanobiology and Phytotherapy Laboratory, Department of Botany, University of North Bengal, Siliguri, West Bengal, 734013, India.
| | - Sourav Kundu
- Nanobiology and Phytotherapy Laboratory, Department of Botany, University of North Bengal, Siliguri, West Bengal, 734013, India.
| | - Palash Mandal
- Nanobiology and Phytotherapy Laboratory, Department of Botany, University of North Bengal, Siliguri, West Bengal, 734013, India.
| | - Swarnendu Roy
- Plant Biochemistry Laboratory, Department of Botany, University of North Bengal, Siliguri, West Bengal, 734013, India.
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Ashwin R, Bagyaraj DJ, Mohan Raju B. Ameliorating the drought stress tolerance of a susceptible soybean cultivar, MAUS 2 through dual inoculation with selected rhizobia and AM fungus. Fungal Biol Biotechnol 2023; 10:10. [PMID: 37138367 PMCID: PMC10158380 DOI: 10.1186/s40694-023-00157-y] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/25/2022] [Accepted: 04/24/2023] [Indexed: 05/05/2023] Open
Abstract
BACKGROUND Drought stress is currently the primary abiotic stress factor for crop loss worldwide. Although drought stress reduces the crop yield significantly, species and genotypes differ in their stress response; some tolerate the stress effect while others not. In several systems, it has been shown that, some of the beneficial soil microbes ameliorate the stress effect and thereby, minimizing yield losses under stress conditions. Realizing the importance of beneficial soil microbes, a field experiment was conducted to study the effect of selected microbial inoculants namely, N-fixing bacteria, Bradyrhizobium liaoningense and P-supplying arbuscular mycorrhizal fungus, Ambispora leptoticha on growth and performance of a drought susceptible and high yielding soybean cultivar, MAUS 2 under drought condition. RESULTS Drought stress imposed during flowering and pod filling stages showed that, dual inoculation consisting of B. liaoningense and A. leptoticha improved the physiological and biometric characteristics including nutrient uptake and yield under drought conditions. Inoculated plants showed an increased number of pods and pod weight per plant by 19% and 34% respectively, while the number of seeds and seed weight per plant increased by 17% and 32% respectively over un-inoculated plants under drought stress condition. Further, the inoculated plants showed higher chlorophyll and osmolyte content, higher detoxifying enzyme activity, and higher cell viability because of less membrane damage compared to un-inoculated plants under stress condition. In addition, they also showed higher water use efficiency coupled with more nutrients accumulation besides exhibiting higher load of beneficial microbes. CONCLUSION Dual inoculation of soybean plants with beneficial microbes would alleviate the drought stress effects, thereby allowing normal plants' growth under stress condition. The study therefore, infers that AM fungal and rhizobia inoculation seems to be necessary when soybean is to be cultivated under drought or water limiting conditions.
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Affiliation(s)
- Revanna Ashwin
- Centre for Natural Biological Resources and Community Development (CNBRCD), 41 RBI Colony, Anand Nagar, Bangalore, Karnataka, 560024, India
- Centre for Research and Development (CRD), PRIST University, Vallam, Thanjavur, Tamil Nadu, 613403, India
| | - Davis Joseph Bagyaraj
- Centre for Natural Biological Resources and Community Development (CNBRCD), 41 RBI Colony, Anand Nagar, Bangalore, Karnataka, 560024, India.
| | - Basavaiah Mohan Raju
- Department of Crop Physiology, University of Agricultural Sciences, Bangalore, Karnataka, 560065, India
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4
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Dual inoculation with Bradyrhizobium liaoningense and Ambispora leptoticha improves drought stress tolerance and Productivity in soybean cultivars, MAUS 2 and DSR 12. Biologia (Bratisl) 2022. [DOI: 10.1007/s11756-022-01196-3] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
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Alamer KH, Ali EF. Influence of foliar application of glycinebetaine on Tagetes erecta L yield cultivated under salinity conditions. BRAZ J BIOL 2022; 82:e256502. [PMID: 35239822 DOI: 10.1590/1519-6984.256502] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2021] [Accepted: 01/18/2022] [Indexed: 11/22/2022] Open
Abstract
Tagetes genus of Composite family consider one of the most favorite floriculture plants. Therefore, of particular interest examine the salt tolerance of this bedding and coloring agent plant. In this research, was report the role of glycinebetaine (GB) in attenuating the adverse impacts of salt stress in African marigold plant, along with their anti-oxidative capacities and biochemical attributes. The salt stressed African marigold (100 and 150 mM NaCl) was treated with GB at 200 mM, beside untreated control plants. According to the obtained results, the growth characters were negatively in salt stressed plants but a mitigate impact of GB were observed in this respect. Obviously, the morphological as well as some physiological characters were reduced with salinity treatments while GB treatment reverses these effects. Overall, the alleviate impact of GB on the negative impact of salt stress was enhanced through improving total phenolic and antioxidant enzyme activity. Further, it is concluded that GB concentration induces the activities of antioxidative enzymes which scavenged ROS increased under saline conditions.
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Affiliation(s)
- K H Alamer
- Biological Sciences Department, Faculty of Science and Arts, King Abdulaziz University, Rabigh 21911, Saudi Arabia
| | - E F Ali
- Biology Department, Faculty of Science, Taif University, Taif, Saudi Arabia.,Department of Horticulture (Floriculture), Faculty of Agriculture, Assuit University, Assuit, Egypt
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Kumar P, Kumar M, Gautam AK, Sonkar AB, Verma A, Singh A, Nisha R, Kumar U, Kumar D, Mahata T, Bhattacharya B, Maity B, Pandeya A, Gosipatala SB, Saha S. Ameliorative effect of fluvoxamine against colon carcinogenesis via COX-2 blockade with oxidative and metabolic stress reduction at the cellular, molecular and metabolic levels. BBA ADVANCES 2022; 2:100046. [PMID: 37082584 PMCID: PMC10074870 DOI: 10.1016/j.bbadva.2022.100046] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022] Open
Abstract
Fluvoxamine's (FLX's) anticancer potential was investigated in pre-clinical research utilizing a DMH-induced colorectal cancer (CRC) rat model. qRT-PCR and immunoblotting validated the mechanistic investigation. The CRC condition was induced in response to COX-2 and IL-6, however, following FLX therapy, the condition returned to normal. FLX's anti-CRC potential may be attributable to COX-2 inhibition since this molecular activity was more apparent for COX-2 than IL-6. FLX repaired the altered metabolites linked to CRC rats, according to 1H-NMR analysis. FLX was shown to be similar to 5-FU in terms of tumor protection, which may be useful in future medication development.
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Affiliation(s)
- Pranesh Kumar
- Department of Pharmaceutical Sciences, Babasaheb Bhimrao Ambedkar University, Vidya Vihar, Raibareli Road, Lucknow 226025, India
- Aryakul College of Pharmacy & Research, Gauri- Bijnaur Road, Natkur, adjacent to CRPF Base Camp, Lucknow, 226002, Uttar Pradesh, India
- Corresponding author: Department of Pharmaceutical Sciences, Babasaheb Bhimrao Ambedkar University, Vidya Vihar, Rai Bareli Road, Lucknow 226025, India.
| | - Mohit Kumar
- Department of Pharmaceutical Sciences, Babasaheb Bhimrao Ambedkar University, Vidya Vihar, Raibareli Road, Lucknow 226025, India
| | - Anurag Kumar Gautam
- Department of Pharmaceutical Sciences, Babasaheb Bhimrao Ambedkar University, Vidya Vihar, Raibareli Road, Lucknow 226025, India
| | - Archana Bharti Sonkar
- Department of Pharmaceutical Sciences, Babasaheb Bhimrao Ambedkar University, Vidya Vihar, Raibareli Road, Lucknow 226025, India
| | - Abhishek Verma
- Department of Pharmaceutical Sciences, Babasaheb Bhimrao Ambedkar University, Vidya Vihar, Raibareli Road, Lucknow 226025, India
| | - Amita Singh
- Department of Pharmaceutical Sciences, Babasaheb Bhimrao Ambedkar University, Vidya Vihar, Raibareli Road, Lucknow 226025, India
| | - Raquibun Nisha
- Department of Pharmaceutical Sciences, Babasaheb Bhimrao Ambedkar University, Vidya Vihar, Raibareli Road, Lucknow 226025, India
| | - Umesh Kumar
- Centre of Biomedical Research, SGPGIMS Campus, Raebareli Road, Lucknow 226014, Uttar Pradesh, India
| | - Dinesh Kumar
- Centre of Biomedical Research, SGPGIMS Campus, Raebareli Road, Lucknow 226014, Uttar Pradesh, India
| | - Tarun Mahata
- Centre of Biomedical Research, SGPGIMS Campus, Raebareli Road, Lucknow 226014, Uttar Pradesh, India
| | - Bolay Bhattacharya
- Gethanjali College of Pharmacy, Cheeryal, Keesara, Hyderabad, 501301, India
| | - Biswanath Maity
- Centre of Biomedical Research, SGPGIMS Campus, Raebareli Road, Lucknow 226014, Uttar Pradesh, India
| | - Abhishek Pandeya
- Department of Biotechnology, Babasaheb Bhimrao Ambedkar University, Vidya Vihar, Raibareli Road, Lucknow 226025, India
| | - Sunil Babu Gosipatala
- Department of Biotechnology, Babasaheb Bhimrao Ambedkar University, Vidya Vihar, Raibareli Road, Lucknow 226025, India
| | - Sudipta Saha
- Department of Pharmaceutical Sciences, Babasaheb Bhimrao Ambedkar University, Vidya Vihar, Raibareli Road, Lucknow 226025, India
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7
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Luo K, Yuan X, Xie C, Liu S, Chen P, Du Q, Zheng B, Wu Y, Wang X, Yong T, Yang W. Diethyl Aminoethyl Hexanoate Increase Relay Strip Intercropping Soybean Grain by Optimizing Photosynthesis Aera and Delaying Leaf Senescence. FRONTIERS IN PLANT SCIENCE 2022; 12:818327. [PMID: 35069671 PMCID: PMC8767051 DOI: 10.3389/fpls.2021.818327] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/19/2021] [Accepted: 12/07/2021] [Indexed: 05/31/2023]
Abstract
Insufficient and unbalanced biomass supply inhibited soybean [Glycine max (L.) Merr.] yield formation in the maize-soybean relay strip intercropping (IS) and monoculture soybean (SS). A field experiment was conducted to explore the soybean yield increase mechanism of DA-6 in IS and SS treatments. In this 2-year experiment, compact maize "Denghai 605" and shade-tolerant soybean "Nandou 25" were selected as cultivated materials. DA-6 with four concentrations, i.e., 0 mg/L (CK), 40 mg/L (D40), 60 mg/L (D60), and 80 mg/L (D80), were sprayed on soybean leaves at the beginning of flowering stage of soybean. Results showed that DA-6 treatments significantly (p < 0.05) increased soybean grain yield, and the yield increase ratio was higher in IS than SS. The leaf area index values and net photosynthesis rate of IS peaked at D60 and were increased by 32.2-49.3% and 24.1-27.2% compared with the corresponding CK. Similarly, DA-6 treatments increased the aboveground dry matter and the amount of soybean dry matter accumulation from the R1 stage to the R8 stage (VDMT) and highest at D60 both in IS and SS. D60 increased the VDMT by 29.0-47.1% in IS and 20.7-29.2% in SS. The TR G at D60 ranged 72.4-77.6% in IS and 61.4-62.5% in SS. The MDA content at D60 treatment was decreased by 38.3% in IS and 25.8% in SS. The active grain-filling day in IS was about 7 days longer than in SS. In D60 treatment, the Vmean and Vmax increased by 6.5% and 6.5% in IS and 5.7% and 4.3% in SS compared with the corresponding CK. Although the pod number and hundred-grain weight were significantly (p < 0.05) increased by DA-6 treatments, the grains per pod were maintained stable. The pod number and hundred-grain weight were increased by 30.1-36.8% and 4.5-6.7% in IS and 6.3-13% and 3.6-5.6% in SS. Thus, the grain yield at D60 was increased by 36.7-38.4% in IS and 21.7-26.6% in SS. DA-6 treatments significantly (p < 0.05) increased soybean grain yield and peaked D60 treatments both in IS and SS.
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Affiliation(s)
- Kai Luo
- College of Agronomy, Sichuan Agricultural University, Chengdu, China
- Sichuan Engineering Research Center for Crop Strip Intercropping System / Key Laboratory of Crop Ecophysiology and Farming System in Southwest, Ministry of Agriculture, Chengdu, China
| | - Xiaoting Yuan
- College of Agronomy, Sichuan Agricultural University, Chengdu, China
- Sichuan Engineering Research Center for Crop Strip Intercropping System / Key Laboratory of Crop Ecophysiology and Farming System in Southwest, Ministry of Agriculture, Chengdu, China
| | - Chen Xie
- College of Agronomy, Sichuan Agricultural University, Chengdu, China
- Sichuan Engineering Research Center for Crop Strip Intercropping System / Key Laboratory of Crop Ecophysiology and Farming System in Southwest, Ministry of Agriculture, Chengdu, China
| | - Shanshan Liu
- College of Agronomy, Sichuan Agricultural University, Chengdu, China
- Sichuan Engineering Research Center for Crop Strip Intercropping System / Key Laboratory of Crop Ecophysiology and Farming System in Southwest, Ministry of Agriculture, Chengdu, China
| | - Ping Chen
- College of Agronomy, Sichuan Agricultural University, Chengdu, China
- Sichuan Engineering Research Center for Crop Strip Intercropping System / Key Laboratory of Crop Ecophysiology and Farming System in Southwest, Ministry of Agriculture, Chengdu, China
| | - Qing Du
- College of Agronomy, Sichuan Agricultural University, Chengdu, China
- Sichuan Engineering Research Center for Crop Strip Intercropping System / Key Laboratory of Crop Ecophysiology and Farming System in Southwest, Ministry of Agriculture, Chengdu, China
| | - Benchuan Zheng
- College of Agronomy, Sichuan Agricultural University, Chengdu, China
- Sichuan Engineering Research Center for Crop Strip Intercropping System / Key Laboratory of Crop Ecophysiology and Farming System in Southwest, Ministry of Agriculture, Chengdu, China
| | - Yushan Wu
- College of Agronomy, Sichuan Agricultural University, Chengdu, China
- Sichuan Engineering Research Center for Crop Strip Intercropping System / Key Laboratory of Crop Ecophysiology and Farming System in Southwest, Ministry of Agriculture, Chengdu, China
| | - Xiaochun Wang
- College of Agronomy, Sichuan Agricultural University, Chengdu, China
- Sichuan Engineering Research Center for Crop Strip Intercropping System / Key Laboratory of Crop Ecophysiology and Farming System in Southwest, Ministry of Agriculture, Chengdu, China
| | - Taiwen Yong
- College of Agronomy, Sichuan Agricultural University, Chengdu, China
- Sichuan Engineering Research Center for Crop Strip Intercropping System / Key Laboratory of Crop Ecophysiology and Farming System in Southwest, Ministry of Agriculture, Chengdu, China
| | - Wenyu Yang
- College of Agronomy, Sichuan Agricultural University, Chengdu, China
- Sichuan Engineering Research Center for Crop Strip Intercropping System / Key Laboratory of Crop Ecophysiology and Farming System in Southwest, Ministry of Agriculture, Chengdu, China
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Almeida GDO, Silva CLC, Mota JAX, Rodal MJN, Ferreira WN, Silva MAM. Do native plant species functionally similar to invasive species suffer more impacts from the invasion in seasonally dry tropical forests? RODRIGUÉSIA 2022. [DOI: 10.1590/2175-7860202273104] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 01/11/2023]
Abstract
Abstract We tested the hypothesis that of the species studied in the Brazilian Semiarid, the ones most functionally similar to tree Azadirachta indicawould be more affected by this exotic species during germination and early development. At first, we produced a crude extract of A. indica fresh leaves in six different dilutions. We placed 25 seeds of four native species ( Cenostigma pyramidale, Libidibia ferrea, Mimosa caesalpiniifolia, and Amburana cearensis) to germinate in Petri dishes for each dilution, with four replicates for each species. We assessed: radicle length, emergence percentage, emergence speed index, and mean emergence time. We conducted an experiment in a greenhouse to assess how the exotic plant affected the development of individual plants of the studied species. We planted five seeds of each native species alone and five in interaction with the exotic species using ten 20-l buckets. The experiment lasted four months, and the functional attributes of the individuals were collected. Among the native species analyzed, according to the cluster analysis using the functional attributes of the species planted alone, M. caesalpiniifolia, C. pyramidaleand L. ferreawere functionally more similar to the exotic species. In the germination experiment, the extract affected only root length, regardless of the functional similarity. We noticed that only M. caesalpiniifoliahad its early development strongly inhibited when planted in interaction with the exotic species. Although the functional similarity between the exotic and the native species did not influence germination, it negatively affected the development.
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9
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Xirocostas ZA, Debono SA, Slavich E, Moles AT. The ZAX Herbivory Trainer—Free software for training researchers to visually estimate leaf damage. Methods Ecol Evol 2021. [DOI: 10.1111/2041-210x.13785] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/01/2022]
Affiliation(s)
- Zoe A. Xirocostas
- Evolution & Ecology Research Centre School of Biological, Earth and Environmental Sciences UNSW Sydney Sydney NSW Australia
| | | | - Eve Slavich
- Evolution & Ecology Research Centre School of Biological, Earth and Environmental Sciences UNSW Sydney Sydney NSW Australia
- Stats Central Mark Wainwright Analytical Centre School of Mathematics and Statistics UNSW Sydney Sydney NSW Australia
| | - Angela T. Moles
- Evolution & Ecology Research Centre School of Biological, Earth and Environmental Sciences UNSW Sydney Sydney NSW Australia
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10
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Leaf Area Calculation Models for Vines Based on Foliar Descriptors. PLANTS 2021; 10:plants10112453. [PMID: 34834818 PMCID: PMC8619606 DOI: 10.3390/plants10112453] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/21/2021] [Revised: 11/07/2021] [Accepted: 11/10/2021] [Indexed: 11/25/2022]
Abstract
In the case of foliar area studies on vines, with a large number of determinations, a simple, fast, sufficiently accurate and low-cost method is very useful. The typology of leaves on the vine is complex, characterized by several descriptive parameters: median rib; secondary venations of the first and second order; angles between the median rib and the secondary venations; sinuses; length and width of the leaf. The present study aimed to evaluate models for calculating the leaf area based on descriptive parameters and KA (KA as the surface constant used to calculate the leaf area) for six vine cultivars, ‘Cabernet Sauvignon’ (CS), ‘Muscat Iantarnîi’ (MI), ‘Muscat Ottonel’ (MO), ‘Chasselas’ (Ch), ‘Victoria’ (Vi) and ‘Muscat Hamburg’ (MH). The determined KA surface constants had subunit values (0.91 to 0.97), except for the cultivars ‘Muscat Iantarnîi’ and ‘Muscat Ottonel’ where the surface constant KA2 (in relation to the second-order secondary venations) had supraunitary values (1.07 and 1.08, respectively). The determination of the leaf area was possible under different conditions of statistical accuracy (R2 = 0.477, p = 0.0119, up to R2 = 0.988, p < 0.001) in relation to the variety and parametric descriptors considered. The models obtained from the regression analysis facilitated a more reliable prediction of the leaf area based on the elements on the left side of the leaf, in relation to the median rib, compared to those on the right. The accuracy of the results was checked on the basis of minimum error (ME) and confirmed by parameters R2, p and RMSE.
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11
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Danilevicz MF, Bayer PE, Nestor BJ, Bennamoun M, Edwards D. Resources for image-based high-throughput phenotyping in crops and data sharing challenges. PLANT PHYSIOLOGY 2021; 187:699-715. [PMID: 34608963 PMCID: PMC8561249 DOI: 10.1093/plphys/kiab301] [Citation(s) in RCA: 14] [Impact Index Per Article: 4.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/04/2020] [Accepted: 05/26/2021] [Indexed: 05/06/2023]
Abstract
High-throughput phenotyping (HTP) platforms are capable of monitoring the phenotypic variation of plants through multiple types of sensors, such as red green and blue (RGB) cameras, hyperspectral sensors, and computed tomography, which can be associated with environmental and genotypic data. Because of the wide range of information provided, HTP datasets represent a valuable asset to characterize crop phenotypes. As HTP becomes widely employed with more tools and data being released, it is important that researchers are aware of these resources and how they can be applied to accelerate crop improvement. Researchers may exploit these datasets either for phenotype comparison or employ them as a benchmark to assess tool performance and to support the development of tools that are better at generalizing between different crops and environments. In this review, we describe the use of image-based HTP for yield prediction, root phenotyping, development of climate-resilient crops, detecting pathogen and pest infestation, and quantitative trait measurement. We emphasize the need for researchers to share phenotypic data, and offer a comprehensive list of available datasets to assist crop breeders and tool developers to leverage these resources in order to accelerate crop breeding.
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Affiliation(s)
- Monica F. Danilevicz
- School of Biological Sciences and Institute of Agriculture, University of Western Australia, Perth, Western Australia 6009, Australia
| | - Philipp E. Bayer
- School of Biological Sciences and Institute of Agriculture, University of Western Australia, Perth, Western Australia 6009, Australia
| | - Benjamin J. Nestor
- School of Biological Sciences and Institute of Agriculture, University of Western Australia, Perth, Western Australia 6009, Australia
| | - Mohammed Bennamoun
- Department of Computer Science and Software Engineering, University of Western Australia, Perth, Western Australia 6009, Australia
| | - David Edwards
- School of Biological Sciences and Institute of Agriculture, University of Western Australia, Perth, Western Australia 6009, Australia
- Author for communication:
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12
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Sanané I, Legrand J, Dillmann C, Marion-Poll F. High-Throughput Feeding Bioassay for Lepidoptera Larvae. J Chem Ecol 2021; 47:642-652. [PMID: 34331170 PMCID: PMC8346434 DOI: 10.1007/s10886-021-01290-x] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2021] [Revised: 05/21/2021] [Accepted: 06/10/2021] [Indexed: 12/03/2022]
Abstract
Finding plant cultivars that are resistant or tolerant against lepidopteran pests, takes time, effort and is costly. We present here a high throughput leaf-disk consumption assay system, to screen plants for resistance or chemicals for their deterrence. A webcam capturing images at regular intervals can follow the feeding activities of 150 larvae placed into individual cages. We developed a computer program running under an open source image analysis program to analyze and measure the surface of each leaf disk over time. We further developed new statistical procedures to analyze the time course of the feeding activities of the larvae and to compare them between treatments. As a test case, we compared how European corn borer larvae respond to a commercial antifeedant containing azadirachtin, and to quinine, which is a bitter alkaloid for many organisms. As expected, increasing doses of azadirachtin reduced and delayed feeding. However, quinine was poorly effective at the range of concentrations tested (10-5 M to 10-2 M). The model cage, the camera holder, the plugins, and the R scripts are freely available, and can be modified according to the users' needs.
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Affiliation(s)
- Inoussa Sanané
- Université Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE - Le Moulon, 91190, Gif-sur-Yvette, France
- Université Paris-Saclay, CNRS, IRD, UMR Évolution, Génomes, Comportement et Écologie, 91198, Gif-sur-Yvette, France
| | - Judith Legrand
- Université Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE - Le Moulon, 91190, Gif-sur-Yvette, France
| | - Christine Dillmann
- Université Paris-Saclay, INRAE, CNRS, AgroParisTech, GQE - Le Moulon, 91190, Gif-sur-Yvette, France
| | - Frédéric Marion-Poll
- Université Paris-Saclay, CNRS, IRD, UMR Évolution, Génomes, Comportement et Écologie, 91198, Gif-sur-Yvette, France.
- Université Paris-Saclay, AgroParisTech, Paris, France.
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Anti-Herbivore Activity of Oregonin, a Diarylheptanoid Found in Leaves and Bark of Red Alder (Alnus rubra). J Chem Ecol 2021; 47:215-226. [PMID: 33475940 DOI: 10.1007/s10886-021-01244-3] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/18/2020] [Revised: 12/26/2020] [Accepted: 01/04/2021] [Indexed: 10/22/2022]
Abstract
Plants synthesize a wide range of bioactive secondary metabolites to defend against pests and pathogens. Red alder (Alnus rubra) bark, root, and leaf extract have a long history of use in traditional medicine and hygiene. Diarylheptanoids, especially oregonin ((5S)-1,7-bis(3,4-dihydroxyphenyl)-5-(β-D-xylopyranosyloxy)-heptan-3-one), have been identified as major bioactive constituents. Diarylheptanoids have become a focus of research following reports of their antioxidant, antifungal, and anti-cancer activities. Recent data suggest that high oregonin concentration is associated with resistance of red alder leaves to western tent caterpillar (Malacosoma californicum) defoliation. Here we test effects of this compound directly on leaf-eating insects. Purified oregonin was examined in insect choice and toxicity tests using lepidopteran caterpillars. The compound exhibited significant anti-feedant activity against cabbage looper (Trichoplusia ni), white-marked tussock moth (Orgyia leucostigma), fall webworm (Hyphantria cunea), and M. californicum at concentrations corresponding to oregonin content of the most resistant alder clones in previous experiments. Toxicity tests were carried out with cabbage looper larvae only, but no contact or ingested toxicity was detected. Our results suggest that oregonin at levels found in red alder leaves early in the growing season may contribute to protecting red alder from leaf-eating insects.
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Sun Y, Beuchat C, Müller-Schärer H. Is biocontrol efficacy rather driven by the plant or the antagonist genotypes? A conceptual bioassay approach. NEOBIOTA 2020. [DOI: 10.3897/neobiota.63.54962] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/16/2022]
Abstract
In the new range, invasive species lack their specialist co-evolved natural enemies, which then might be used as biocontrol agents. Populations of both a plant invader in the introduced range and its potential biocontrol agents in the native range may be genetically differentiated among geographically distinct regions. This, in turn, is expected to affect the outcome of their interaction when brought together, and by this the efficacy of the control. It further raises the question, is the outcome of such interactions mainly driven by the genotype of the plant invader (some plant genotypes being more resistant/tolerant to most of the antagonist genotypes), or by the antagonist genotype (some antagonist genotypes being more effective against most of the plant genotypes)? This is important for biocontrol management, as only the latter is expected to result in more effective control, when introducing the right biocontrol agent genotypes. In a third scenario, where the outcome of the interaction is driven by a specific plant by antagonist genotype interactions, an effective control will need the introduction of carefully selected multiple antagonist genotypes. Here, we challenged in a complete factorial design 11 plant genotypes (mainly half-siblings) of the invasive Ambrosia artemisiifolia with larvae of eight genotypes (full-siblings) of the leaf beetle Ophraella communa, a potential biocontrol insect, and assessed larval and adult performance and leaf consumption as proxies of their expected impact on the efficacy of biological control. Both species were collected from several locations from their native (USA) and introduced ranges (Europe and China). In summary, we found O. communa genotype to be the main driver of this interaction, indicating the potential for at least short-term control efficacy when introducing the best beetle genotypes. Besides the importance of investigating the genetic structure both among and within populations of the plant invader and the biocontrol agent during the pre-release phase of a biocontrol program, we advocate integrating such bioassays, as this will give a first indication of the probability for an – at least – short- to mid-term efficacy when introducing a potential biocontrol agent, and on where to find the most efficient agent genotypes.
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Novello N, Ferfuia C, Pasković I, Fabris A, Baldini M, Schat H, Pošćić F. Independent variation in copper tolerance and copper accumulation among crop species and varieties. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2020; 156:538-551. [PMID: 33059265 DOI: 10.1016/j.plaphy.2020.09.039] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/02/2020] [Accepted: 09/24/2020] [Indexed: 06/11/2023]
Abstract
Copper (Cu) locally contaminates soils and might negatively affect growth and yield of crops. A better understanding of plant copper tolerance and accumulation is needed in order to breed more Cu-tolerant or Cu-efficient crops. Cu tolerance was evaluated in different varieties of seven species (Brassica carinata, B. juncea, B. napus, Cynara cardunculus, Helianthus annuus, Nicotiana tabacum and Raphanus sativus) exposed to a series of CuSO4 concentrations (0.1-8 μM CuSO4) in the nutrient solution. Plants were further exposed to 0.1 μM CuSO4 and to their variety-specific concentrations that reduced root growth to 50% of the maximum rate (EC50). Among all the varieties of all the species the EC50 varied from 0.7 up to 3.1 μM Cu. B. carinata was significantly more Cu-sensitive than the other species, which were not significantly different among each other, and B. carinata and H. annuus accommodated significant intra-specific, inter-varietal variation. There were significant differences between species in Cu uptake efficiency and nutrient status. When under EC50 exposure, all the Brassicaceae, except B. carinata, maintained low Cu concentrations in shoots, whereas the other species and B. carinata exhibited significantly increased shoot Cu concentrations, compared to the control. There was no apparent relationship between Cu tolerance and Cu accumulation in roots and shoots, suggesting that the observed variation in tolerance, both between and within species, is not explained by differential exclusion capacity. Discriminant analysis and treatment comparisons suggest possible contribution of lignin, saturated fatty acids, manganese (Mn) and zinc (Zn) in tolerance to high Cu concentrations in shoot.
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Affiliation(s)
- Nicola Novello
- Department of Agriculture, Food, Environment and Animal Sciences, University of Udine, via delle Scienze 206, Udine, 33100, Italy
| | - Claudio Ferfuia
- Department of Agriculture, Food, Environment and Animal Sciences, University of Udine, via delle Scienze 206, Udine, 33100, Italy
| | - Igor Pasković
- Institute of Agriculture and Tourism Poreč, K. Huguesa 8, Poreč, 52440, Croatia
| | - Andrea Fabris
- Department of Agriculture, Food, Environment and Animal Sciences, University of Udine, via delle Scienze 206, Udine, 33100, Italy
| | - Mario Baldini
- Department of Agriculture, Food, Environment and Animal Sciences, University of Udine, via delle Scienze 206, Udine, 33100, Italy
| | - Henk Schat
- Department of Ecological Science, Faculty of Sciences, Vrije Universiteit, De Boelelaan 1085, Amsterdam, 1081, HV, the Netherlands
| | - Filip Pošćić
- Department of Applied Sciences, Institute for Adriatic Crops and Karst Reclamation, Put Duilova 11, Split, 21000, Croatia.
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Exogenous Ascorbic Acid Induced Chilling Tolerance in Tomato Plants Through Modulating Metabolism, Osmolytes, Antioxidants, and Transcriptional Regulation of Catalase and Heat Shock Proteins. PLANTS 2020; 9:plants9040431. [PMID: 32244604 PMCID: PMC7238171 DOI: 10.3390/plants9040431] [Citation(s) in RCA: 51] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/09/2020] [Revised: 03/20/2020] [Accepted: 03/22/2020] [Indexed: 12/26/2022]
Abstract
Chilling, a sort of cold stress, is a typical abiotic ecological stress that impacts the development as well as the growth of crops. The present study was carried to investigate the role of ascorbic acid root priming in enhancing tolerance of tomato seedlings against acute chilling stress. The treatments included untreated control, ascorbic acid-treated plants (AsA; 0.5 mM), acute chilling-stressed plants (4 °C), and chilling stressed seedlings treated by ascorbic acid. Exposure to acute chilling stress reduced growth in terms of length, fresh and dry biomass, pigment synthesis, and photosynthesis. AsA was effective in mitigating the injurious effects of chilling stress to significant levels when supplied at 0.5 mM concentrations. AsA priming reduced the chilling mediated oxidative damage by lowering the electrolyte leakage, lipid peroxidation, and hydrogen peroxide. Moreover, up regulating the activity of enzymatic components of the antioxidant system. Further, 0.5 mM AsA proved beneficial in enhancing ions uptake in normal and chilling stressed seedlings. At the gene expression level, AsA significantly lowered the expression level of CAT and heat shock protein genes. Therefore, we theorize that the implementation of exogenous AsA treatment reduced the negative effects of severe chilling stress on tomato.
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de Sousa LF, de Menezes-Silva PE, Lourenço LL, Galmés J, Guimarães AC, da Silva AF, Dos Reis Lima AP, Henning LMM, Costa AC, Silva FG, Farnese FDS. Improving water use efficiency by changing hydraulic and stomatal characteristics in soybean exposed to drought: the involvement of nitric oxide. PHYSIOLOGIA PLANTARUM 2020; 168:576-589. [PMID: 31102278 DOI: 10.1111/ppl.12983] [Citation(s) in RCA: 10] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2019] [Revised: 05/12/2019] [Accepted: 05/13/2019] [Indexed: 06/09/2023]
Abstract
A variety of cellular responses is needed to ensure the plants survival during drought, but little is known about the signaling mechanisms involved in this process. Soybean cultivars (EMBRAPA 48 and BR 16, tolerant and sensitive to drought, respectively) were exposed to the following treatments: control conditions (plants in field capacity), drought (20% of available water in the soil), sodium nitroprusside (SNP) treatment (plants irrigated and treated with 100-µM SNP [SNP-nitric oxide (NO) donor molecule], and Drought + SNP (plants subjected to drought and SNP treatment). Plants remained in these conditions until the reproductive stage and were evaluated for physiological (photosynthetic pigments, chlorophyll a fluorescence and gas exchange rates), hydraulic (water potential, osmotic potential and leaf hydraulic conductivity) and morpho-anatomical traits (biomass, venation density and stomatal characterization). Exposure to water deficit considerably reduced water potential in both cultivars and resulted in decrease in photosynthesis and biomass accumulation. The addition of the NO donor attenuated these damaging effects of water deficit and increased the tolerance index of both cultivars. The results showed that NO was able to reduce plant's water loss, while maintaining their biomass production through alteration in stomatal characteristics, hydraulic conductivity and the biomass distribution pattern. These hydraulic and morpho-anatomical alterations allowed the plants to obtain, transport and lose less water to the atmosphere, even in water deficit conditions.
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Affiliation(s)
| | | | | | - Jeroni Galmés
- Departament de Biologia, Universitat de les Illes Balears, Balears, Spain
| | | | | | | | | | - Alan C Costa
- Department of Biology, Instituto Federal Goiano, Goiás, Brazil
| | - Fabiano G Silva
- Department of Biology, Instituto Federal Goiano, Goiás, Brazil
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18
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Cao W, Zhou J, Yuan Y, Ye H, Nguyen HT, Chen J, Zhou J. Quantifying Variation in Soybean Due to Flood Using a Low-Cost 3D Imaging System. SENSORS (BASEL, SWITZERLAND) 2019; 19:E2682. [PMID: 31200576 PMCID: PMC6630946 DOI: 10.3390/s19122682] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 04/15/2019] [Revised: 06/04/2019] [Accepted: 06/04/2019] [Indexed: 11/17/2022]
Abstract
Flood has an important effect on plant growth by affecting their physiologic and biochemical properties. Soybean is one of the main cultivated crops in the world and the United States is one of the largest soybean producers. However, soybean plant is sensitive to flood stress that may cause slow growth, low yield, small crop production and result in significant economic loss. Therefore, it is critical to develop soybean cultivars that are tolerant to flood. One of the current bottlenecks in developing new crop cultivars is slow and inaccurate plant phenotyping that limits the genetic gain. This study aimed to develop a low-cost 3D imaging system to quantify the variation in the growth and biomass of soybean due to flood at its early growth stages. Two cultivars of soybeans, i.e. flood tolerant and flood sensitive, were planted in plant pots in a controlled greenhouse. A low-cost 3D imaging system was developed to take measurements of plant architecture including plant height, plant canopy width, petiole length, and petiole angle. It was found that the measurement error of the 3D imaging system was 5.8% in length and 5.0% in angle, which was sufficiently accurate and useful in plant phenotyping. Collected data were used to monitor the development of soybean after flood treatment. Dry biomass of soybean plant was measured at the end of the vegetative stage (two months after emergence). Results show that four groups had a significant difference in plant height, plant canopy width, petiole length, and petiole angle. Flood stress at early stages of soybean accelerated the growth of the flood-resistant plants in height and the petiole angle, however, restrained the development in plant canopy width and the petiole length of flood-sensitive plants. The dry biomass of flood-sensitive plants was near two to three times lower than that of resistant plants at the end of the vegetative stage. The results indicate that the developed low-cost 3D imaging system has the potential for accurate measurements in plant architecture and dry biomass that may be used to improve the accuracy of plant phenotyping.
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Affiliation(s)
- Wenyi Cao
- Institute Laser Engineering, Beijing University of Technology, Beijing 100124, China.
- Research Center of 3D Printing Engineering Technology, Beijing University of Technology, Beijing 100124, China.
- Division of Food Systems and Bioengineering, University of Missouri, Columbia, MO 65211, USA.
| | - Jing Zhou
- Division of Food Systems and Bioengineering, University of Missouri, Columbia, MO 65211, USA.
| | - Yanping Yuan
- Institute Laser Engineering, Beijing University of Technology, Beijing 100124, China.
- Research Center of 3D Printing Engineering Technology, Beijing University of Technology, Beijing 100124, China.
| | - Heng Ye
- Division of Plant Sciences, University of Missouri, Columbia, MO 65211, USA.
| | - Henry T Nguyen
- Division of Plant Sciences, University of Missouri, Columbia, MO 65211, USA.
| | - Jimin Chen
- Institute Laser Engineering, Beijing University of Technology, Beijing 100124, China.
- Research Center of 3D Printing Engineering Technology, Beijing University of Technology, Beijing 100124, China.
| | - Jianfeng Zhou
- Division of Food Systems and Bioengineering, University of Missouri, Columbia, MO 65211, USA.
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19
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Schuh MK, Bahlai CA, Malmstrom CM, Landis DA. Effect of Switchgrass Ecotype and Cultivar on Establishment, Feeding, and Development of Fall Armyworm (Lepidoptera: Noctuidae). JOURNAL OF ECONOMIC ENTOMOLOGY 2019; 112:440-449. [PMID: 30346580 DOI: 10.1093/jee/toy292] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/13/2018] [Indexed: 06/08/2023]
Abstract
As interest in production of second-generation biofuels increases, dedicated biomass crops are likely to be called upon to help meet feedstock demands. Switchgrass (Panicum virgatum L.) is a North American native perennial grass that as a candidate biomass crop, combines high biomass yields with other desirable ecosystem services. At present, switchgrass is produced on limited acres in the United States and experiences relatively minor insect pest problems. However, as switchgrass undergoes breeding to increase biomass yield and quality, and is grown on more acres, insect pest pressure will probably increase. To investigate how currently available switchgrass ecotypes and cultivars may influence herbivory by generalist insect herbivores, we performed feeding trials using neonate and late-instar fall armyworm [Spodoptera frugiperda JE Smith (Lepidoptera: Noctuidae)]. No-choice feeding experiments were used to explore how switchgrass varieties influence larval establishment, consumption levels, and life-history traits in contrast to a preferred host, corn (Zea mays L.). Neonate S. frugiperda consumed greater amounts of corn than switchgrass and increased amounts of upland versus lowland ecotypes. Late-instar larvae, which do the majority of the larval feeding, exhibited lower consumption of lowland ecotypes, which led to increased development time and reduced pupal weights. The exception to these trends was the upland cultivar 'Trailblazer', which unexpectedly performed similarly to lowland cultivars. These results suggest that both switchgrass ecotype and cultivar can influence feeding damage by a common generalist herbivore. These findings can be used to help inform current switchgrass planting decisions as well as future breeding efforts.
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Affiliation(s)
- Marissa K Schuh
- Department of Entomology, Michigan State University, East Lansing, MI, USA
| | - Christie A Bahlai
- Department of Biological Sciences, Kent State University, Kent, OH, USA
| | - Carolyn M Malmstrom
- Department of Plant Biology and Graduate Program in Ecology, Evolutionary Biology, and Behavior, Michigan State University, East Lansing, MI, USA
| | - Douglas A Landis
- Department of Entomology, Michigan State University, East Lansing, MI, USA
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20
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Effects of photostimulation on the catabolic process of xenobiotics. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2019; 191:38-43. [DOI: 10.1016/j.jphotobiol.2018.12.004] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/22/2018] [Revised: 11/30/2018] [Accepted: 12/10/2018] [Indexed: 12/31/2022]
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21
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Räsch A, Hunsche M, Mail M, Burkhardt J, Noga G, Pariyar S. Agricultural adjuvants may impair leaf transpiration and photosynthetic activity. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2018; 132:229-237. [PMID: 30219740 DOI: 10.1016/j.plaphy.2018.08.042] [Citation(s) in RCA: 19] [Impact Index Per Article: 3.2] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/03/2018] [Revised: 08/29/2018] [Accepted: 08/31/2018] [Indexed: 06/08/2023]
Abstract
Adjuvants such as surfactants are commonly incorporated into agrochemical formulations to enhance the biological efficiency of foliar sprays by improving the wetting behavior of the spray and/or the penetration of the active ingredients into the leaf tissues. Penetration accelerating adjuvants are known to increase the cuticular permeability and may alter the cuticular barrier to water loss. However, none or very little emphasis has been given to the impacts of adjuvants on crop water balance or drought tolerance, a very important factor affecting crop performance under water scarcity. Two model crops with strongly varying leaf traits, kohlrabi (Brassica oleracea) and apple (Malus domestica) seedlings were grown in controlled environments. Three adjuvants with varying solubility in the cuticle, i.e. octanol-water partition coefficients (logKow) were selected: rapeseed methyl ester (RME) and the surfactants alkyl polyglycoside (APG) and polyoxyethylated tallow amine (POEA). The higher the logKow of the adjuvant, the stronger was the increase of minimum epidermal conductance (gmin, an essential parameter describing plant drought tolerance). However, such effects depended on the physio-chemical properties of the leaf surface. In comparison to kohlrabi, the adjuvant effects on gmin of apple leaves were relatively weak. The increase of gmin was associated with a decrease in contact angle and with an alteration of the wax microstructure. Furthermore, POEA affected photochemical efficiency of kohlrabi leaves. Some adjuvants could have a temporal influence on transpirational water loss and gmin. At repeated applications, they might alter the effective water use and possibly reduce drought tolerance of some horticultural crops.
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Affiliation(s)
- Anna Räsch
- University of Bonn, Institute of Crop Science and Resource Conservation, Horticultural Science Department, Auf dem Huegel 6, D-53121, Bonn, Germany
| | - Mauricio Hunsche
- University of Bonn, Institute of Crop Science and Resource Conservation, Horticultural Science Department, Auf dem Huegel 6, D-53121, Bonn, Germany
| | - Matthias Mail
- University of Bonn, Institute of Crop Science and Resource Conservation, Horticultural Science Department, Auf dem Huegel 6, D-53121, Bonn, Germany
| | - Jürgen Burkhardt
- University of Bonn, Institute of Crop Science and Resource Conservation, Plant Nutrition Department, Karlrobert-Kreiten-Strasse 13, D-53115, Bonn, Germany
| | - Georg Noga
- University of Bonn, Institute of Crop Science and Resource Conservation, Horticultural Science Department, Auf dem Huegel 6, D-53121, Bonn, Germany
| | - Shyam Pariyar
- University of Bonn, Institute of Crop Science and Resource Conservation, Horticultural Science Department, Auf dem Huegel 6, D-53121, Bonn, Germany.
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22
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Kőrösi Á, Markó V, Kovács-Hostyánszki A, Somay L, Varga Á, Elek Z, Boreux V, Klein AM, Földesi R, Báldi A. Climate-induced phenological shift of apple trees has diverse effects on pollinators, herbivores and natural enemies. PeerJ 2018; 6:e5269. [PMID: 30065875 PMCID: PMC6064640 DOI: 10.7717/peerj.5269] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/27/2018] [Accepted: 06/29/2018] [Indexed: 11/20/2022] Open
Abstract
Climate change is altering the phenology of trophically linked organisms, leading to increased asynchrony between species with unknown consequences for ecosystem services. Although phenological mismatches are reported from several ecosystems, experimental evidence for altering multiple ecosystem services is hardly available. We examined how the phenological shift of apple trees affected the abundance and diversity of pollinators, generalist and specialist herbivores and predatory arthropods. We stored potted apple trees in the greenhouse or cold store in early spring before transferring them into orchards to cause mismatches and sampled arthropods on the trees repeatedly. Assemblages of pollinators on the manipulated and control trees differed markedly, but their overall abundance was similar indicating a potential insurance effect of wild bee diversity to ensure fruit set in flower-pollinator mismatch conditions. Specialized herbivores were almost absent from manipulated trees, while less-specialized ones showed diverse responses, confirming the expectation that more specialized interactions are more vulnerable to phenological mismatch. Natural enemies also responded to shifted apple tree phenology and the abundance of their prey. While arthropod abundances either declined or increased, species diversity tended to be lower on apple trees with shifted phenology. Our study indicates novel results on the role of biodiversity and specialization in plant-insect mismatch situations.
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Affiliation(s)
- Ádám Kőrösi
- MTA-ELTE-MTM Ecology Research Group, Budapest, Hungary
- Theoretical Evolutionary Ecology Group, Department of Animal Ecology and Tropical Biology, University of Würzburg, Würzburg, Germany
| | - Viktor Markó
- Department of Entomology, Szent István University, Budapest, Hungary
| | - Anikó Kovács-Hostyánszki
- Institute of Ecology and Botany, Lendület Ecosystem Services Research Group, MTA Centre for Ecological Research, Vácrátót, Hungary
| | - László Somay
- Institute of Ecology and Botany, Lendület Ecosystem Services Research Group, MTA Centre for Ecological Research, Vácrátót, Hungary
| | - Ákos Varga
- Department of Entomology, Szent István University, Budapest, Hungary
| | - Zoltán Elek
- MTA-ELTE-MTM Ecology Research Group, Budapest, Hungary
| | - Virginie Boreux
- Nature Conservation and Landscape Ecology, Faculty of Environment and Natural Resources, University of Freiburg, Freiburg, Germany
| | - Alexandra-Maria Klein
- Nature Conservation and Landscape Ecology, Faculty of Environment and Natural Resources, University of Freiburg, Freiburg, Germany
| | - Rita Földesi
- Agroecology and Organic Farming, Institute of Crop Science and Resource Conservation, University of Bonn, Bonn, Germany
| | - András Báldi
- Institute of Ecology and Botany, Lendület Ecosystem Services Research Group, MTA Centre for Ecological Research, Vácrátót, Hungary
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23
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Đeković-Šević M, Bošković-Vragolović N, Garić-Grulović R, Pejanović S. Experimental study on the ozone absorption accompanied by instantaneous chemical reaction. CHEM ENG COMMUN 2018. [DOI: 10.1080/00986445.2017.1399125] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/17/2022]
Affiliation(s)
- M. Đeković-Šević
- High Vocational School of Technology, Aranđelovac, Republic of Serbia
| | - N. Bošković-Vragolović
- Department of Chemical Engineering, Faculty of Technology and Metallurgy, University of Belgrade, Belgrade, Republic of Serbia
| | - R. Garić-Grulović
- Department of Catalysis and Chemical Engineering, Institute for Chemistry, Technology and Metallurgy, University of Belgrade, Belgrade, Republic of Serbia
| | - S. Pejanović
- Department of Chemical Engineering, Faculty of Technology and Metallurgy, University of Belgrade, Belgrade, Republic of Serbia
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24
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ROS-induced autophagy reduces B16F10 melanoma cell proliferative activity. Lasers Med Sci 2018; 33:1335-1340. [DOI: 10.1007/s10103-018-2489-6] [Citation(s) in RCA: 11] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/09/2017] [Accepted: 03/19/2018] [Indexed: 11/25/2022]
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25
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Leng BY, Yuan F, Dong XX, Wang BS. Salt gland distribution in limonium bicolor at the individual level. ACTA ACUST UNITED AC 2018. [DOI: 10.1088/1755-1315/113/1/012202] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/11/2022]
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26
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Yuan F, Liang X, Li Y, Yin S, Wang B. Methyl jasmonate improves tolerance to high salt stress in the recretohalophyte Limonium bicolor. FUNCTIONAL PLANT BIOLOGY : FPB 2018; 46:82-92. [PMID: 30939260 DOI: 10.1071/fp18120] [Citation(s) in RCA: 27] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/02/2017] [Accepted: 08/29/2018] [Indexed: 05/20/2023]
Abstract
Limonium bicolor is a typical recretohalophyte with salt glands in the epidermis, which shows maximal growth at moderate salt concentrations (100mM NaCl) but reduced growth in the presence of excess salt (more than 200mM). Jasmonic acid (JA) alleviates the reduced growth of L. bicolor under salt stress; however, the underlying mechanism is unknown. In this study we investigated the effects of exogenous methyl jasmonate (MeJA) application on L. bicolor growth at high NaCl concentrations. We found that treatment with 300mM NaCl led to dramatic inhibition of seedling growth that was significantly alleviated by the application of 0.03mM MeJA, resulting in a biomass close to that of plants not subjected to salt stress. To determine the parameters that correlate with MeJA-induced salt tolerance (assessed as the biomass production in saline and control conditions), we measured 14 physiological parameters relating to ion contents, plasma membrane permeability, photosynthetic parameters, salt gland density, and salt secretion. We identified a correlation between individual indicators and salt tolerance: the most positively correlated indicator was net photosynthetic rate, and the most negatively correlated one was relative electrical conductivity. These findings provide insights into a possible mechanism underlying MeJA-mediated salt stress alleviation.
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Affiliation(s)
- Fang Yuan
- Shandong Provincial Key Laboratory of Plant Stress, College of Life Sciences, Shandong Normal University, Ji'nan, Shandong, 250014, PR China
| | - Xue Liang
- Shandong Provincial Key Laboratory of Plant Stress, College of Life Sciences, Shandong Normal University, Ji'nan, Shandong, 250014, PR China
| | - Ying Li
- Shandong Provincial Key Laboratory of Plant Stress, College of Life Sciences, Shandong Normal University, Ji'nan, Shandong, 250014, PR China
| | - Shanshan Yin
- Shandong Provincial Key Laboratory of Plant Stress, College of Life Sciences, Shandong Normal University, Ji'nan, Shandong, 250014, PR China
| | - Baoshan Wang
- Shandong Provincial Key Laboratory of Plant Stress, College of Life Sciences, Shandong Normal University, Ji'nan, Shandong, 250014, PR China
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Blazakis KN, Kosma M, Kostelenos G, Baldoni L, Bufacchi M, Kalaitzis P. Description of olive morphological parameters by using open access software. PLANT METHODS 2017; 13:111. [PMID: 29238398 PMCID: PMC5725956 DOI: 10.1186/s13007-017-0261-8] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2017] [Accepted: 11/29/2017] [Indexed: 05/16/2023]
Abstract
BACKGROUND The morphological analysis of olive leaves, fruits and endocarps may represent an efficient tool for the characterization and discrimination of cultivars and the establishment of relationships among them. In recent years, much attention has been focused on the application of molecular markers, due to their high diagnostic efficiency and independence from environmental and phenological variables. RESULTS In this study, we present a semi-automatic methodology of detecting various morphological parameters. With the aid of computing and image analysis tools, we created semi-automatic algorithms applying intuitive mathematical descriptors that quantify many fruit, leaf and endocarp morphological features. In particular, we examined quantitative and qualitative characters such as size, shape, symmetry, contour roughness and presence of additional structures such as nipple, petiole, endocarp surface roughness, etc.. CONCLUSION We illustrate the performance and the applicability of our approach on Greek olive cultivars; on sets of images from fruits, leaves and endocarps. In addition, the proposed methodology was also applied for the description of other crop species morphologies such as tomato, grapevine and pear. This allows us to describe crop morphologies efficiently and robustly in a semi-automated way.
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Affiliation(s)
- Konstantinos N. Blazakis
- Department of Horticultural Genetics and Biotechnology, Mediterranean Agronomic Institute of Chania (MAICh), Alsyllio Agrokipiou, PO BOX 85, 73100 Chania-Crete, Greece
| | - Maria Kosma
- Department of Horticultural Genetics and Biotechnology, Mediterranean Agronomic Institute of Chania (MAICh), Alsyllio Agrokipiou, PO BOX 85, 73100 Chania-Crete, Greece
| | | | - Luciana Baldoni
- Italian National Research Council, Institute of Biosciences and Bio-Resources (CNR-IBBR), Via Madonna Alta, 130-06128 Perugia, Italy
| | - Marina Bufacchi
- Italian National Research Council, Institute for Agriculture and Forest Systems in the Mediterranean (CNR-ISAFOM), Via Madonna Alta, 130-06128 Perugia, Italy
| | - Panagiotis Kalaitzis
- Department of Horticultural Genetics and Biotechnology, Mediterranean Agronomic Institute of Chania (MAICh), Alsyllio Agrokipiou, PO BOX 85, 73100 Chania-Crete, Greece
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Marting PR, Wcislo WT, Pratt SC. Colony personality and plant health in the Azteca-Cecropia mutualism. Behav Ecol 2017. [DOI: 10.1093/beheco/arx165] [Citation(s) in RCA: 12] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/12/2022] Open
Abstract
Abstract
For interspecific mutualisms, the behavior of one partner can influence the fitness of the other, especially in the case of symbiotic mutualisms where partners live in close physical association for much of their lives. Behavioral effects on fitness may be particularly important if either species in these long-term relationships displays personality. We conducted a field study on collective personality in Azteca constructor colonies that live in Cecropia trees, one of the most successful and prominent mutualisms of the neotropics. These pioneer plants provide hollow internodes for nesting and nutrient-rich food bodies; in return, the ants provide protection from herbivores and encroaching vines. We tested the consistency and correlation of 5 colony-level behavioral traits, censused colonies, and measured the amount of leaf damage for each plant. Four of five traits were both consistent within colonies and correlated among colonies. This reveals a behavioral syndrome along a docile-aggressive axis, with higher-scoring colonies showing greater activity, aggression, and responsiveness. Scores varied substantially between colonies and were independent of colony size and age. Host plants of more active, aggressive colonies had less leaf damage, suggesting a link between a colony’s personality and effective defense of its host, though the directionality of this link remains uncertain. Our field study shows that colony personality is an ecologically relevant phenomenon and sheds light on the importance of behavioral differences within mutualism dynamics.
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Affiliation(s)
- Peter R Marting
- School of Life Sciences, Arizona State University, Tempe, AZ, USA
- Smithsonian Tropical Research Institute, Balboa Ancon, Panama, Republic of Panama
| | - William T Wcislo
- Smithsonian Tropical Research Institute, Balboa Ancon, Panama, Republic of Panama
| | - Stephen C Pratt
- School of Life Sciences, Arizona State University, Tempe, AZ, USA
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Cook JL, Newton J, Millett J. Environmental differences between sites control the diet and nutrition of the carnivorous plant Drosera rotundifolia. PLANT AND SOIL 2017; 423:41-58. [PMID: 31402798 PMCID: PMC6647551 DOI: 10.1007/s11104-017-3484-6] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2017] [Accepted: 10/31/2017] [Indexed: 05/06/2023]
Abstract
BACKGROUND AND AIMS Carnivorous plants are sensitive to small changes in resource availability, but few previous studies have examined how differences in nutrient and prey availability affect investment in and the benefit of carnivory. We studied the impact of site-level differences in resource availability on ecophysiological traits of carnivory for Drosera rotundifolia L. METHODS We measured prey availability, investment in carnivory (leaf stickiness), prey capture and diet of plants growing in two bogs with differences in N deposition and plant available N: Cors Fochno (0.62 g m-2 yr.-1, 353 μg l-1), Whixall Moss (1.37 g m-2 yr.-1, 1505 μg l-1). The total N amount per plant and the contributions of prey/root N to the plants' N budget were calculated using a single isotope natural abundance method. RESULTS Plants at Whixall Moss invested less in carnivory, were less likely to capture prey, and were less reliant on prey-derived N (25.5% compared with 49.4%). Actual prey capture did not differ between sites. Diet composition differed - Cors Fochno plants captured 62% greater proportions of Diptera. CONCLUSIONS Our results show site-level differences in plant diet and nutrition consistent with differences in resource availability. Similarity in actual prey capture may be explained by differences in leaf stickiness and prey abundance.
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Affiliation(s)
- Joni L. Cook
- Centre for Hydrological and Ecosystem Science, Department of Geography, Loughborough University, Loughborough, LE11 3TU Leicestershire UK
- NERC Life Sciences Mass Spectrometry Facility, Scottish Universities Environmental Research Centre, Rankine Avenue, Scottish Enterprise Technology Park, East Kilbride, G75 0QF UK
- Department of Geography, Loughborough University, Loughborough, Leicestershire LE11 3TU UK
| | - J. Newton
- NERC Life Sciences Mass Spectrometry Facility, Scottish Universities Environmental Research Centre, Rankine Avenue, Scottish Enterprise Technology Park, East Kilbride, G75 0QF UK
| | - J. Millett
- Centre for Hydrological and Ecosystem Science, Department of Geography, Loughborough University, Loughborough, LE11 3TU Leicestershire UK
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Fraser LA, Kinghorn AB, Dirkzwager RM, Liang S, Cheung YW, Lim B, Shiu SCC, Tang MSL, Andrew D, Manitta J, Richards JS, Tanner JA. A portable microfluidic Aptamer-Tethered Enzyme Capture (APTEC) biosensor for malaria diagnosis. Biosens Bioelectron 2017; 100:591-596. [PMID: 29032164 DOI: 10.1016/j.bios.2017.10.001] [Citation(s) in RCA: 74] [Impact Index Per Article: 10.6] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2017] [Revised: 09/29/2017] [Accepted: 10/02/2017] [Indexed: 01/04/2023]
Abstract
There is a critical need for better biosensors for the detection and diagnosis of malaria. We previously developed a DNA aptamer that recognises the Plasmodium falciparum lactate dehydrogenase (PfLDH) enzyme with high sensitivity and specificity. The aptamer was integrated into an Aptamer-Tethered Enzyme Capture (APTEC) assay as a laboratory-based diagnostic approach. However, a portable equipment-free point-of-care aptamer-mediated biosensor could have a significant impact on malaria diagnosis in endemic regions. Here, we present a new concept for a malaria biosensor whereby aptamers are coated onto magnetic microbeads for magnet-guided capture, wash and detection of the biomarker. A biosensor incorporating three separate microfluidic chambers was designed to enable such magnet-guided equipment-free colorimetric detection of PfLDH. A series of microfluidic biosensor prototypes were optimised to lower rates of inter-chamber diffusion, increase sensitivity, and provide a method for point-of-care sample testing. The biosensor showed high sensitivity and specificity when detecting PfLDH using both in vitro cultured parasite samples and using clinical samples from malaria patients. The high performance of the biosensor provides a proof-of-principle for a portable biosensor that could be adaptable for a variety of aptamer-mediated diagnostic scenarios.
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Affiliation(s)
- Lewis A Fraser
- School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong, China
| | - Andrew B Kinghorn
- School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong, China
| | - Roderick M Dirkzwager
- School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong, China
| | - Shaolin Liang
- School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong, China
| | - Yee-Wai Cheung
- School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong, China
| | - Bryce Lim
- School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong, China
| | - Simon Chi-Chin Shiu
- School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong, China
| | - Marco S L Tang
- School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong, China
| | - Dean Andrew
- Centre for Biomedical Research, The Burnet Institute of Medical Research and Public Health, Melbourne, Victoria, Australia
| | - Joseph Manitta
- Department of Haematology, Victorian Infectious Diseases Reference Laboratory, Melbourne, Victoria, Australia
| | - Jack S Richards
- Centre for Biomedical Research, The Burnet Institute of Medical Research and Public Health, Melbourne, Victoria, Australia; Department of Medicine, University of Melbourne, Parkville, Victoria, Australia; Department of Infectious Diseases, Monash University, Melbourne, Victoria, Australia
| | - Julian A Tanner
- School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Pokfulam, Hong Kong, China.
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de Oliveira SC, Monteiro JS, Pires-Santos GM, Sampaio FJP, Soares AP, Soares LGP, Pinheiro AL. LED antimicrobial photodynamic therapy with phenothiazinium dye against Staphylococcus aureus : An in vitro study. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2017; 175:46-50. [DOI: 10.1016/j.jphotobiol.2017.08.029] [Citation(s) in RCA: 13] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/09/2017] [Revised: 08/16/2017] [Accepted: 08/21/2017] [Indexed: 11/28/2022]
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Xiong X, Yu L, Yang W, Liu M, Jiang N, Wu D, Chen G, Xiong L, Liu K, Liu Q. A high-throughput stereo-imaging system for quantifying rape leaf traits during the seedling stage. PLANT METHODS 2017; 13:7. [PMID: 28163771 PMCID: PMC5282657 DOI: 10.1186/s13007-017-0157-7] [Citation(s) in RCA: 32] [Impact Index Per Article: 4.6] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/13/2016] [Accepted: 01/13/2017] [Indexed: 05/08/2023]
Abstract
BACKGROUND The fitness of the rape leaf is closely related to its biomass and photosynthesis. The study of leaf traits is significant for improving rape leaf production and optimizing crop management. Canopy structure and individual leaf traits are the major indicators of quality during the rape seedling stage. Differences in canopy structure reflect the influence of environmental factors such as water, sunlight and nutrient supply. The traits of individual rape leaves traits indicate the growth period of the rape as well as its canopy shape. RESULTS We established a high-throughput stereo-imaging system for the reconstruction of the three-dimensional canopy structure of rape seedlings from which leaf area and plant height can be extracted. To evaluate the measurement accuracy of leaf area and plant height, 66 rape seedlings were randomly selected for automatic and destructive measurements. Compared with the manual measurements, the mean absolute percentage error of automatic leaf area and plant height measurements was 3.68 and 6.18%, respectively, and the squares of the correlation coefficients (R2) were 0.984 and 0.845, respectively. Compared with the two-dimensional projective imaging method, the leaf area extracted using stereo-imaging was more accurate. In addition, a semi-automatic image analysis pipeline was developed to extract 19 individual leaf shape traits, including 11 scale-invariant traits, 3 inner cavity related traits, and 5 margin-related traits, from the images acquired by the stereo-imaging system. We used these quantified traits to classify rapes according to three different leaf shapes: mosaic-leaf, semi-mosaic-leaf, and round-leaf. Based on testing of 801 seedling rape samples, we found that the leave-one-out cross validation classification accuracy was 94.4, 95.6, and 94.8% for stepwise discriminant analysis, the support vector machine method and the random forest method, respectively. CONCLUSIONS In this study, a nondestructive and high-throughput stereo-imaging system was developed to quantify canopy three-dimensional structure and individual leaf shape traits with improved accuracy, with implications for rape phenotyping, functional genomics, and breeding.
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Affiliation(s)
- Xiong Xiong
- Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology, 1037 Luoyu Rd., Wuhan, 430074 People’s Republic of China
| | - Lejun Yu
- Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology, 1037 Luoyu Rd., Wuhan, 430074 People’s Republic of China
| | - Wanneng Yang
- National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research, Huazhong Agricultural University, Wuhan, 430070 People’s Republic of China
- College of Engineering, Huazhong Agricultural University, Wuhan, 430070 People’s Republic of China
| | - Meng Liu
- National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research, Huazhong Agricultural University, Wuhan, 430070 People’s Republic of China
| | - Ni Jiang
- Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology, 1037 Luoyu Rd., Wuhan, 430074 People’s Republic of China
| | - Di Wu
- College of Engineering, Huazhong Agricultural University, Wuhan, 430070 People’s Republic of China
| | - Guoxing Chen
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, Huazhong Agricultural University, Wuhan, 430070 People’s Republic of China
| | - Lizhong Xiong
- National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research, Huazhong Agricultural University, Wuhan, 430070 People’s Republic of China
| | - Kede Liu
- National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research, Huazhong Agricultural University, Wuhan, 430070 People’s Republic of China
| | - Qian Liu
- Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology, 1037 Luoyu Rd., Wuhan, 430074 People’s Republic of China
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Berdugo-Lattke ML, Gónzalez F, Rangel-Ch JO, Gómez F. P-type based dimensionality reduction for open contours of Colombian Páramo plant species. ECOL INFORM 2016. [DOI: 10.1016/j.ecoinf.2016.09.001] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.1] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/15/2022]
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Bai Z, Mao S, Han Y, Feng L, Wang G, Yang B, Zhi X, Fan Z, Lei Y, Du W, Li Y. Study on Light Interception and Biomass Production of Different Cotton Cultivars. PLoS One 2016; 11:e0156335. [PMID: 27227675 PMCID: PMC4882027 DOI: 10.1371/journal.pone.0156335] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.1] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/25/2015] [Accepted: 05/12/2016] [Indexed: 11/18/2022] Open
Abstract
Identifying the characteristics of light interception and utilization is of great significance for improving the potential photosynthetic activity of plants. The present research investigates the differences in absorbing and converting photosynthetically active radiation (PAR) among various cotton cultivars. Field experiments were conducted in 2012, 2013 and 2014 in Anyang, Henan, China. Ten cultivars with different maturity and plant architectures were planted at a density of 60,000 plants ha-1 in randomized blocks, with three replicates. The spatial distribution of light in canopy was measured and quantified with a geo-statistical method, according to which the cumulative amount of intercepted radiation was calculated by Simpson 3/8 rules. Finally, light interception was analyzed in association with the biomass accumulation of different cultivars. The key results were: (1) late-maturing varieties with an incompact plant architecture captured more solar radiation throughout the whole growth period than middle varieties with columnar architecture and even more than early varieties with compact architecture, and they produced more biomass; (2) the highest PAR interception ratio and the maximum biomass accumulation rate occurred during the blossoming and boll-forming stage, when leaf area index (LAI) reached its peak; (3) the distribution within the canopy presented a significant spatial heterogeneity, and at late growing stage, the PAR was mainly intercepted by upper canopies in incompact-type plant communities, but was more homogeneous in columnar-type plants; however, the majority of radiation was transmitted through the canopy in compact-type colonies; (4) there was not a consistent variation relationship between the cumulative intercepted PAR (iPAR) and biomass among these cultivars over the three years of the study. Based on these results, we attempted to clarify the distinction in light spatial distribution within different canopies and the patterns of PAR interception in diverse cotton cultivars with different hereditary characters, thereby providing a significant basis for researchers to select cultivars with appropriate growth period and optimal plant architecture for improvement of light interception and utilization.
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Affiliation(s)
- Zhigang Bai
- Institute of Cotton Research of Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Shuchun Mao
- Institute of Cotton Research of Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Yingchun Han
- Institute of Cotton Research of Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Lu Feng
- Institute of Cotton Research of Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Guoping Wang
- Institute of Cotton Research of Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Beifang Yang
- Institute of Cotton Research of Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Xiaoyu Zhi
- Institute of Cotton Research of Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Zhengyi Fan
- Institute of Cotton Research of Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Yaping Lei
- Institute of Cotton Research of Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Wenli Du
- Institute of Cotton Research of Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Yabing Li
- Institute of Cotton Research of Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
- * E-mail:
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Brito-Rocha E, Schilling AC, Dos Anjos L, Piotto D, Dalmolin AC, Mielke MS. Regression models for estimating leaf area of seedlings and adult individuals of Neotropical rainforest tree species. BRAZ J BIOL 2016; 76:983-989. [PMID: 27191468 DOI: 10.1590/1519-6984.05515] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/28/2015] [Accepted: 09/15/2015] [Indexed: 11/22/2022] Open
Abstract
Individual leaf area (LA) is a key variable in studies of tree ecophysiology because it directly influences light interception, photosynthesis and evapotranspiration of adult trees and seedlings. We analyzed the leaf dimensions (length - L and width - W) of seedlings and adults of seven Neotropical rainforest tree species (Brosimum rubescens, Manilkara maxima, Pouteria caimito, Pouteria torta, Psidium cattleyanum, Symphonia globulifera and Tabebuia stenocalyx) with the objective to test the feasibility of single regression models to estimate LA of both adults and seedlings. In southern Bahia, Brazil, a first set of data was collected between March and October 2012. From the seven species analyzed, only two (P. cattleyanum and T. stenocalyx) had very similar relationships between LW and LA in both ontogenetic stages. For these two species, a second set of data was collected in August 2014, in order to validate the single models encompassing adult and seedlings. Our results show the possibility of development of models for predicting individual leaf area encompassing different ontogenetic stages for tropical tree species. The development of these models was more dependent on the species than the differences in leaf size between seedlings and adults.
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Affiliation(s)
- E Brito-Rocha
- Departamento de Ciências Biológicas, Universidade Estadual de Santa Cruz - UESC, Rodovia Jorge Amado, Km 16, CEP 45662-900, Ilhéus, BA, Brazil
| | - A C Schilling
- Departamento de Ciências Exatas e Tecnológicas, Universidade Estadual de Santa Cruz - UESC, Rodovia Jorge Amado, Km 16, CEP 45662-900, Ilhéus, BA, Brazil
| | - L Dos Anjos
- Departamento de Ciências Biológicas, Universidade Estadual de Santa Cruz - UESC, Rodovia Jorge Amado, Km 16, CEP 45662-900, Ilhéus, BA, Brazil
| | - D Piotto
- Centro de Formação em Ciências e Tecnologias Agroflorestais, Universidade Federal do Sul da Bahia - UFSB, BR 415, Km 39, CEP 45613-204, Itabuna, BA, Brazil
| | - A C Dalmolin
- Departamento de Ciências Biológicas, Universidade Estadual de Santa Cruz - UESC, Rodovia Jorge Amado, Km 16, CEP 45662-900, Ilhéus, BA, Brazil
| | - M S Mielke
- Departamento de Ciências Biológicas, Universidade Estadual de Santa Cruz - UESC, Rodovia Jorge Amado, Km 16, CEP 45662-900, Ilhéus, BA, Brazil
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Ventorino V, Parillo R, Testa A, Viscardi S, Espresso F, Pepe O. Chestnut green waste composting for sustainable forest management: Microbiota dynamics and impact on plant disease control. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2016; 166:168-77. [PMID: 26496847 DOI: 10.1016/j.jenvman.2015.10.018] [Citation(s) in RCA: 43] [Impact Index Per Article: 5.4] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2015] [Revised: 09/25/2015] [Accepted: 10/11/2015] [Indexed: 05/03/2023]
Abstract
Making compost from chestnut lignocellulosic waste is a possible sustainable management strategy for forests that employs a high-quality renewable organic resource. Characterization of the microbiota involved in composting is essential to better understand the entire process as well as the properties of the final product. Therefore, this study investigated the microbial communities involved in the composting of chestnut residues obtained from tree cleaning and pruning. The culture-independent approach taken highlighted the fact that the microbiota varied only slightly during the process, with the exception of those of the starting substrate and mature compost. The statistical analysis indicated that most of the bacterial and fungal species in the chestnut compost persisted during composting. The dominant microbial population detected during the process belonged to genera known to degrade recalcitrant lignocellulosic materials. Specifically, we identified fungal genera, such as Penicillium, Fusarium, Cladosporium, Aspergillus and Mucor, and prokaryotic species affiliated with Bacilli, Actinobacteria, Flavobacteria and γ-Proteobacteria. The suppressive properties of compost supplements for the biocontrol of Sclerotinia minor and Rhizoctonia solani were also investigated. Compared to pure substrate, the addition of compost to the peat-based growth substrates resulted in a significant reduction of disease in tomato plants of up to 70 % or 51 % in the presence of Sclerotinia minor or Rhizoctonia solani, respectively. The obtained results were related to the presence of putative bio-control agents and plant growth-promoting rhizobacteria belonging to the genera Azotobacter, Pseudomonas, Stenotrophomonas, Bacillus, Flavobacterium, Streptomyces and Actinomyces in the chestnut compost. The composting of chestnut waste may represent a sustainable agricultural practice for disposing of lignocellulosic waste by transforming it into green waste compost that can be used to improve the fitness of agricultural plants.
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Affiliation(s)
- Valeria Ventorino
- Department of Agriculture, Division of Microbiology, University of Naples Federico II, Via Università, 100, 80055, Portici, NA, Italy
| | - Rita Parillo
- Department of Agriculture, Division of Biology and Protection of Agricultural and Forest Systems, University of Naples Federico II, Via Università, 100, 80055, Portici, NA, Italy
| | - Antonino Testa
- Department of Agriculture, Division of Biology and Protection of Agricultural and Forest Systems, University of Naples Federico II, Via Università, 100, 80055, Portici, NA, Italy
| | - Sharon Viscardi
- Department of Agriculture, Division of Microbiology, University of Naples Federico II, Via Università, 100, 80055, Portici, NA, Italy
| | - Francesco Espresso
- Department of Agriculture, Division of Microbiology, University of Naples Federico II, Via Università, 100, 80055, Portici, NA, Italy
| | - Olimpia Pepe
- Department of Agriculture, Division of Microbiology, University of Naples Federico II, Via Università, 100, 80055, Portici, NA, Italy.
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Stamm C, Räsänen K, Burdon F, Altermatt F, Jokela J, Joss A, Ackermann M, Eggen R. Unravelling the Impacts of Micropollutants in Aquatic Ecosystems. ADV ECOL RES 2016. [DOI: 10.1016/bs.aecr.2016.07.002] [Citation(s) in RCA: 77] [Impact Index Per Article: 9.6] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/14/2022]
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MacLeod MJR, Dedrick J, Ashton C, Sung WWL, Champigny MJ, Weretilnyk EA. Exposure of two Eutrema salsugineum (Thellungiella salsuginea) accessions to water deficits reveals different coping strategies in response to drought. PHYSIOLOGIA PLANTARUM 2015; 155:267-80. [PMID: 25496221 DOI: 10.1111/ppl.12316] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/05/2014] [Revised: 12/08/2014] [Accepted: 12/09/2014] [Indexed: 05/14/2023]
Abstract
Eutrema salsugineum is an extremophile related to Arabidopsis. Accessions from Yukon, Canada and Shandong, China, were evaluated for their tolerance to water deficits. Plants were exposed to two periods of water deficit separated by an interval of re-watering and recovery. All plants took the same time to wilt during the first drought exposure but Yukon plants took 1 day longer than Shandong plants following the second drought treatment. Following re-watering and turgor recovery, solute potentials of Shandong leaves returned to predrought values while those of Yukon leaves were lower than predrought levels consistent with having undergone osmotic adjustment. Polar metabolites profiled in re-watered plants showed that different metabolites are accumulated by Yukon and Shandong plants recovering from a water deficit with glucose more abundant in Yukon and fructose in Shandong leaves. The drought-responsive expression of dehydrin genes RAB18, ERD1, RD29A and RD22 showed greater changes in transcript abundance in Yukon relative to Shandong leaves during both water deficits and recovery with the greatest difference in expression appearing during the second drought. We propose that the initial exposure of Yukon plants to drought renders them more resilient to water loss during a subsequent water deficit leading to delayed wilting. Yukon plants also established a high leaf water content and increased specific leaf area during the second deficit. Shandong plants undergoing the same treatment regime do not show the same beneficial drought tolerance responses and likely use drought avoidance to cope with water deficits.
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Affiliation(s)
| | - Jeff Dedrick
- Department of Biology, McMaster University, Hamilton, ON, L8S 4K1, Canada
| | - Claire Ashton
- Department of Biology, McMaster University, Hamilton, ON, L8S 4K1, Canada
| | - Wilson W L Sung
- Department of Biology, McMaster University, Hamilton, ON, L8S 4K1, Canada
| | - Marc J Champigny
- Department of Biology, McMaster University, Hamilton, ON, L8S 4K1, Canada
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Yang W, Guo Z, Huang C, Wang K, Jiang N, Feng H, Chen G, Liu Q, Xiong L. Genome-wide association study of rice (Oryza sativa L.) leaf traits with a high-throughput leaf scorer. JOURNAL OF EXPERIMENTAL BOTANY 2015; 66:5605-15. [PMID: 25796084 PMCID: PMC4585412 DOI: 10.1093/jxb/erv100] [Citation(s) in RCA: 27] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/19/2023]
Abstract
Leaves are the plant's solar panel and food factory, and leaf traits are always key issues to investigate in plant research. Traditional methods for leaf trait measurement are time-consuming. In this work, an engineering prototype has been established for high-throughput leaf scoring (HLS) of a large number of Oryza sativa accessions. The mean absolute per cent of errors in traditional measurements versus HLS were below 5% for leaf number, area, shape, and colour. Moreover, HLS can measure up to 30 leaves per minute. To demonstrate the usefulness of HLS in dissecting the genetic bases of leaf traits, a genome-wide association study (GWAS) was performed for 29 leaf traits related to leaf size, shape, and colour at three growth stages using HLS on a panel of 533 rice accessions. Nine associated loci contained known leaf-related genes, such as Nal1 for controlling the leaf width. In addition, a total of 73, 123, and 177 new loci were detected for traits associated with leaf size, colour, and shape, respectively. In summary, after evaluating the performance with a large number of rice accessions, the combination of GWAS and high-throughput leaf phenotyping (HLS) has proven a valuable strategy to identify the genetic loci controlling rice leaf traits.
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Affiliation(s)
- Wanneng Yang
- National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan 430070, PR China College of Engineering, Huazhong Agricultural University, Wuhan 430070, PR China Agricultural Bioinformatics Key Laboratory of Hubei Province, Huazhong Agricultural University, Wuhan 430070, PR China
| | - Zilong Guo
- National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan 430070, PR China
| | - Chenglong Huang
- College of Engineering, Huazhong Agricultural University, Wuhan 430070, PR China Agricultural Bioinformatics Key Laboratory of Hubei Province, Huazhong Agricultural University, Wuhan 430070, PR China
| | - Ke Wang
- College of Engineering, Huazhong Agricultural University, Wuhan 430070, PR China Agricultural Bioinformatics Key Laboratory of Hubei Province, Huazhong Agricultural University, Wuhan 430070, PR China
| | - Ni Jiang
- Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology, 1037 Luoyu Road, Wuhan 430074, PR China
| | - Hui Feng
- Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology, 1037 Luoyu Road, Wuhan 430074, PR China
| | - Guoxing Chen
- MOA Key Laboratory of Crop Ecophysiology and Farming System in the Middle Reaches of the Yangtze River, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, Hubei 430070, PR China
| | - Qian Liu
- Britton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, Huazhong University of Science and Technology, 1037 Luoyu Road, Wuhan 430074, PR China
| | - Lizhong Xiong
- National Key Laboratory of Crop Genetic Improvement and National Center of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan 430070, PR China
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Goggin FL, Lorence A, Topp CN. Applying high-throughput phenotyping to plant-insect interactions: picturing more resistant crops. CURRENT OPINION IN INSECT SCIENCE 2015; 9:69-76. [PMID: 32846711 DOI: 10.1016/j.cois.2015.03.002] [Citation(s) in RCA: 17] [Impact Index Per Article: 1.9] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/04/2015] [Accepted: 03/09/2015] [Indexed: 05/18/2023]
Abstract
Through automated image collection and analysis, high-throughput phenotyping (HTP) systems non-destructively quantify a diversity of traits in large plant populations. Some platforms collect data in greenhouses or growth chambers while others are field-based. Platforms also vary in the number and type of sensors, including visible, fluorescence, infrared, hyperspectral, and three-dimensional cameras that can detect traits within and beyond the visible spectrum. These systems could be applied to quantify the impact of herbivores on plant health, to monitor herbivores in choice or no-choice bioassays, or to estimate plant properties such as defensive allelochemicals. By increasing the throughput, precision, and dimensionality of these measures, HTP has the potential to revolutionize the field of plant-insect interactions, including breeding programs for resistance and tolerance.
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Affiliation(s)
- Fiona L Goggin
- Department of Entomology, 319 Agriculture Building, University of Arkansas, Fayetteville, AR 72701, United States.
| | - Argelia Lorence
- Arkansas Biosciences Institute at Arkansas State University, PO Box 639, State University, AR 72467, United States
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Santoro MV, Cappellari L, Giordano W, Banchio E. Systemic Induction of Secondary Metabolite Biosynthesis in Medicinal Aromatic Plants Mediated by Rhizobacteria. SOIL BIOLOGY 2015. [DOI: 10.1007/978-3-319-13401-7_13] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/02/2022]
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Zhi X, Han Y, Mao S, Wang G, Feng L, Yang B, Fan Z, Du W, Lu J, Li Y. Light spatial distribution in the canopy and crop development in cotton. PLoS One 2014; 9:e113409. [PMID: 25409026 PMCID: PMC4237451 DOI: 10.1371/journal.pone.0113409] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/03/2014] [Accepted: 10/06/2014] [Indexed: 11/25/2022] Open
Abstract
The partitioning of light is very difficult to assess, especially in discontinuous or irregular canopies. The aim of the present study was to analyze the spatial distribution of photosynthetically active radiation (PAR) in a heterogeneous cotton canopy based on a geo-statistical sampling method. Field experiments were conducted in 2011 and 2012 in Anyang, Henan, China. Field plots were arranged in a randomized block design with the main plot factor representing the plant density. There were 3 replications and 6 densities used in every replicate. The six plant density treatments were 15,000, 33,000, 51,000, 69,000, 87,000 and 105,000 plants ha(-1). The following results were observed: 1) transmission within the canopy decreased with increasing density and significantly decreased from the top to the bottom of the canopy, but the greatest decreases were observed in the middle layers of the canopy on the vertical axis and closing to the rows along the horizontal axis; 2) the transmitted PAR (TPAR) of 6 different cotton populations decreased slowly and then increased slightly as the leaves matured, the TPAR values were approximately 52.6-84.9% (2011) and 42.7-78.8% (2012) during the early cotton developmental stage, and were 33.9-60.0% (2011) and 34.5-61.8% (2012) during the flowering stage; 3) the Leaf area index (LAI) was highly significant exponentially correlated (R(2) = 0.90 in 2011, R(2) = 0.91 in 2012) with the intercepted PAR (IPAR) within the canopy; 4) and a highly significant linear correlation (R(2) = 0.92 in 2011, R(2) = 0.96 in 2012) was observed between the accumulated IPAR and the biomass. Our findings will aid researchers to improve radiation-use efficiency by optimizing the ideotype for cotton canopy architecture based on light spatial distribution characteristics.
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Affiliation(s)
- Xiaoyu Zhi
- Institute of Cotton Research of the Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Yingchun Han
- Institute of Cotton Research of the Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Shuchun Mao
- Institute of Cotton Research of the Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Guoping Wang
- Institute of Cotton Research of the Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Lu Feng
- Institute of Cotton Research of the Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Beifang Yang
- Institute of Cotton Research of the Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Zhengyi Fan
- Institute of Cotton Research of the Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Wenli Du
- Institute of Cotton Research of the Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Jianhua Lu
- Institute of Cotton Research of the Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
| | - Yabing Li
- Institute of Cotton Research of the Chinese Academy of Agricultural Sciences/State Key Laboratory of Cotton Biology, Anyang, 455000, Henan, China
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Easlon HM, Bloom AJ. Easy Leaf Area: Automated digital image analysis for rapid and accurate measurement of leaf area. APPLICATIONS IN PLANT SCIENCES 2014; 2:apps1400033. [PMID: 25202639 PMCID: PMC4103476 DOI: 10.3732/apps.1400033] [Citation(s) in RCA: 154] [Impact Index Per Article: 15.4] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/03/2014] [Accepted: 06/17/2014] [Indexed: 05/20/2023]
Abstract
PREMISE OF THE STUDY Measurement of leaf areas from digital photographs has traditionally required significant user input unless backgrounds are carefully masked. Easy Leaf Area was developed to batch process hundreds of Arabidopsis rosette images in minutes, removing background artifacts and saving results to a spreadsheet-ready CSV file. • METHODS AND RESULTS Easy Leaf Area uses the color ratios of each pixel to distinguish leaves and calibration areas from their background and compares leaf pixel counts to a red calibration area to eliminate the need for camera distance calculations or manual ruler scale measurement that other software methods typically require. Leaf areas estimated by this software from images taken with a camera phone were more accurate than ImageJ estimates from flatbed scanner images. • CONCLUSIONS Easy Leaf Area provides an easy-to-use method for rapid measurement of leaf area and nondestructive estimation of canopy area from digital images.
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Affiliation(s)
- Hsien Ming Easlon
- Department of Plant Sciences, University of California, One Shields Avenue, Davis, California 95616 USA
- Author for correspondence:
| | - Arnold J. Bloom
- Department of Plant Sciences, University of California, One Shields Avenue, Davis, California 95616 USA
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Chaney L, Baucom RS. The costs and benefits of tolerance to competition in ipomoea purpurea, the common morning glory. Evolution 2014; 68:1698-709. [PMID: 24611886 DOI: 10.1111/evo.12383] [Citation(s) in RCA: 15] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/19/2013] [Accepted: 02/11/2014] [Indexed: 11/29/2022]
Abstract
Tolerance to competition has been hypothesized to reduce the negative impact of plant-plant competition on fitness. Although competitive interactions are a strong selective force, an analysis of net selection on tolerance to competition is absent in the literature. Using 55 full/half-sibling families from 18 maternal lines in the crop weed Ipomoea purpurea, we measured fitness and putative tolerance traits when grown with and without competition in an agricultural field. We tested for the presence of genetic variation for tolerance to competition and determined if there were costs and benefits of this trait. We also assessed correlations between tolerance and potential tolerance traits. We uncovered a fitness benefit of tolerance in the presence of competition and a cost in its absence. We failed to detect evidence of additive genetic variation underlying tolerance, but did uncover the presence of a significant maternal-line effect for tolerance, which suggests its evolutionary trajectory is not easily predicted. The cost of tolerance is likely due to later initiation of flowering of tolerant individuals in the absence of competition, whereas relative growth rate was found to positively covary with tolerance in the presence of competition, and can thus be considered a tolerance trait.
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Affiliation(s)
- Lindsay Chaney
- Department of Biological Sciences, University of Cincinnati, Cincinnati, Ohio, 45221.
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Development of a viral biopesticide for the control of the Guatemala potato tuber moth Tecia solanivora. J Invertebr Pathol 2012; 112:184-91. [PMID: 23232473 DOI: 10.1016/j.jip.2012.11.014] [Citation(s) in RCA: 24] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/04/2012] [Revised: 11/23/2012] [Accepted: 11/30/2012] [Indexed: 11/21/2022]
Abstract
The Guatemala potato tuber moth Tecia solanivora (Povolny) (Lep. Gelechiidae) is an invasive species from Mesoamerica that has considerably extended its distribution area in recent decades. While this species is considered to be a major potato pest in Venezuela, Colombia, and Ecuador, currently no specific control methods are available for farmers. To address this issue we developed a biopesticide formulation to be used in integrated pest management of T. solanivora, following three steps. First, search for entomopathogenic viruses were carried out through extensive bioprospections in 12 countries worldwide. As a result, new Phthorimaea operculella granulovirus (PhopGV) isolates were found in T. solanivora and five other gelechid species. Second, twenty PhopGV isolates, including both previously known and newly found isolates, were genetically and/or biologically characterized in order to choose the best candidate for a biopesticide formulation. Sequence data were obtained for the ecdysteroid UDP-glucosyltransferase (egt) gene, a single copy gene known to play a role in pathogenicity. Three different sizes (1086, 1305 and 1353 bp) of egt were found among the virus isolates analyzed. Unexpectedly, no obvious correlation between egt size and pathogenicity was found. Bioassays on T. solanivora neonates showed a maximum of a 14-fold difference in pathogenicity among the eight PhopGV isolates tested. The most pathogenic PhopGV isolate, JLZ9f, had a medium lethal concentration (LC(50)) of 10 viral occlusion bodies per square mm of consumed tuber skin. Third, we tested biopesticide dust formulations by mixing a dry carrier (calcium carbonate) with different adjuvants (magnesium chloride or an optical brightener or soya lecithin) and different specific amounts of JLZ9f. During laboratory experiments, satisfactory control of the pest (>98% larva mortality compared to untreated control) was achieved with a formulation containing 10 macerated JLZ9f-dead T. solanivora larvae per kg of calcium carbonate mixed with 50 mL/kg of soya lecithin. The final product provides an interesting alternative to chemical pesticides for Andean farmers affected by this potato pest.
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Gachango E, Hanson LE, Rojas A, Hao JJ, Kirk WW. Fusarium spp. Causing Dry Rot of Seed Potato Tubers in Michigan and Their Sensitivity to Fungicides. PLANT DISEASE 2012; 96:1767-1774. [PMID: 30727256 DOI: 10.1094/pdis-11-11-0932-re] [Citation(s) in RCA: 25] [Impact Index Per Article: 2.1] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 06/09/2023]
Abstract
A survey of seed potato tubers in Michigan seed production storage facilities was carried out during 2009 and 2010. Fusarium spp. associated with tuber dry rot symptoms were identified to species and tested for sensitivity to difenoconazole, fludioxonil, and thiabendazole. Symptomatic tubers (n = 370) were collected from a total of 51 seed lots, from which 228 isolates of Fusarium were recovered and identified to 11 species. Fusarium oxysporum was the most commonly isolated species (30.3%), followed by F. equiseti (19.3%). F. sambucinum and F. avenaceum were third most prevalent (each at 13.6%). Less prevalent species (each at 4 to 10%) included F. cerealis, F. solani, and F. acuminatum; and species present at ≤3% included F. sporotrichioides, F. torulosum, F. tricinctum, and F. graminearum. Representative isolates of all species were pathogenic when inoculated onto seed tubers ('Dark Red Norland'). Isolates of F. sambucinum were the most virulent. All 228 isolates of Fusarium were sensitive to difenoconazole (effective fungicide concentration that caused 50% inhibition of mycelial growth [EC50] < 5 mg/liter). Insensitivity to fludioxonil (EC50 > 100 mg/liter) was detected only for F. sambucinum and F. oxysporum isolates at 8.9 and 20.4%, respectively. All isolates were sensitive to thiabendazole (EC50 < 5 mg/liter), except for those of F. sambucinum (EC50 > 100 mg/liter). Therefore, knowledge of what Fusarium spp. are present in seed potato storage facilities in Michigan may be important if using fludioxonil or thiabendazole for seed piece treatment but not when using difenoconazole.
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Affiliation(s)
| | - L E Hanson
- Department of Plant Pathology and United States Department of Agriculture-Agricultural Research Service
| | - A Rojas
- Department of Plant Pathology, Michigan State University, East Lansing 48824
| | - J J Hao
- Department of Plant Pathology, Michigan State University, East Lansing 48824
| | - W W Kirk
- Department of Plant Pathology, Michigan State University, East Lansing 48824
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Leaf area and water content changes after permanent and temporary storage. PLoS One 2012; 7:e42604. [PMID: 22880051 PMCID: PMC3411807 DOI: 10.1371/journal.pone.0042604] [Citation(s) in RCA: 22] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/21/2012] [Accepted: 07/09/2012] [Indexed: 11/20/2022] Open
Abstract
Accurate measurements of leaf morphology must be taken to develop models of ecosystem productivity and climate change projections. Once leaves are removed from a plant they begin to lose water and degrade. If specimens cannot be measured immediately after harvest, it is important to store the leaves in a manner that reduces morphological changes. If preserved specimens are used, estimates that closely match fresh measurements need to be calculated. This study examined the change in leaf area after storage treatments and developed models that can be used to more accurately estimate initial leaf area. Fresh leaf area was measured from ten plant species then stored in one of two common storage treatments. After storage, leaf area was re-measured and comparisons were made between species and growth forms. Leaf area decreased the most after permanent storage treatments and the least after temporary storage. Pressed leaves shrunk over 18% while cold storage leaves shrunk under 4%. The woody dicot growth form shrunk the least in all treatments. Shrinkage was positively correlated with initial water content and dissection index, a measure of leaf shape and complexity.
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Yan CF, Han SJ, Zhou YM, Wang CG, Dai GH, Xiao WF, Li MH. Needle-age related variability in nitrogen, mobile carbohydrates, and δ13C within Pinus koraiensis tree crowns. PLoS One 2012; 7:e35076. [PMID: 22493732 PMCID: PMC3320863 DOI: 10.1371/journal.pone.0035076] [Citation(s) in RCA: 16] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/05/2011] [Accepted: 03/12/2012] [Indexed: 11/19/2022] Open
Abstract
For both ecologists and physiologists, foliar physioecology as a function of spatially and temporally variable environmental factors such as sunlight exposure within a tree crown is important for understanding whole tree physiology and for predicting ecosystem carbon balance and productivity. Hence, we studied concentrations of nitrogen (N), non-structural carbohydrates (NSC = soluble sugars + starch), and δ(13)C in different-aged needles within Pinus koraiensis tree crowns, to understand the needle age- and crown position-related physiology, in order to test the hypothesis that concentrations of N, NSC, and δ(13)C are needle-age and crown position dependent (more light, more photosynthesis affecting N, NSC, and δ(13)C), and to develop an accurate sampling strategy. The present study indicated that the 1-yr-old needles had significantly higher concentration levels of mobile carbohydrates (both on a mass and an area basis) and N(area) (on an area basis), as well as NSC-N ratios, but significantly lower levels of N(mass) (on a mass basis) concentration and specific leaf area (SLA), compared to the current-year needles. Azimuthal (south-facing vs. north-facing crown side) effects were found to be significant on starch [both on a mass (ST(mass)) and an area basis (ST(area))], δ(13)C values, and N(area), with higher levels in needles on the S-facing crown side than the N-facing crown side. Needle N(mass) concentrations significantly decreased but needle ST(mass), ST(area), and δ(13)C values significantly increased with increasing vertical crown levels. Our results suggest that the sun-exposed crown position related to photosynthetic activity and water availability affects starch accumulation and carbon isotope discrimination. Needle age associated with physiological activity plays an important role in determining carbon and nitrogen physiology. The present study indicates that across-scale sampling needs to carefully select tissue samples with equal age from a comparable crown position.
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Affiliation(s)
- Cai-Feng Yan
- State Key Laboratory of Forest and Soil Ecology, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, China
- Graduate University of Chinese Academy of Sciences, Beijing, China
| | - Shi-Jie Han
- State Key Laboratory of Forest and Soil Ecology, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, China
| | - Yu-Mei Zhou
- State Key Laboratory of Forest and Soil Ecology, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, China
| | - Cun-Guo Wang
- State Key Laboratory of Forest and Soil Ecology, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, China
- Graduate University of Chinese Academy of Sciences, Beijing, China
| | - Guan-Hua Dai
- Research Station of Changbai Moutain Forest Ecosystems, Chinese Academy of Sciences, Erdaobaihe, China
| | - Wen-Fa Xiao
- Key Laboratory of Forest Ecology and Environment, State Forestry Administration, Chinese Academy of Forestry, Beijing, China
| | - Mai-He Li
- State Key Laboratory of Forest and Soil Ecology, Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang, China
- Tree Physioecology, Swiss Federal Research Institute WSL, Birmensdorf, Switzerland
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Van Timmeren S, Wise JC, Isaacs R. Soil application of neonicotinoid insecticides for control of insect pests in wine grape vineyards. PEST MANAGEMENT SCIENCE 2012; 68:537-542. [PMID: 22290809 DOI: 10.1002/ps.2285] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.4] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/02/2011] [Revised: 08/18/2011] [Accepted: 08/18/2011] [Indexed: 05/31/2023]
Abstract
BACKGROUND Soil application of systemic neonicotinoid insecticides can provide opportunities for long-term control of insect pests in vineyards, with minimal risk of pesticide drift or worker exposure. This study compared the effectiveness of neonicotinoid insecticides applied via irrigation injection on key early-season and mid-season insect pests of vineyards in the eastern United States. RESULTS On vines trained to grow on drip irrigation, early-season application of imidacloprid, clothianidin, thiamethoxam and dinotefuran provided high levels of control against the potato leafhopper, Empoasca fabae. Protection of vines against Japanese beetle, Popillia japonica, and grape berry moth, Paralobesia viteana, was also observed after mid-season applications. Efficacy was poor in commercial vineyards when treatments were applied to the soil before irrigation or rain, indicating that vines must be grown with an irrigation system for efficient uptake of the insecticide. CONCLUSIONS In drip-irrigated vineyards, soil-applied neonicotinoids can be used to provide long residual control of either early-season or mid- to late-season foliage pests of vineyards. This approach can reduce the dependence on foliar-applied insecticides, with associated benefits for non-target exposure to workers and natural enemies.
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Affiliation(s)
- Steven Van Timmeren
- Department of Entomology, Michigan State University, East Lansing, MI 48824, USA
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