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Nimbeshaho F, Nihorimbere G, Arias AA, Liénard C, Steels S, Nibasumba A, Nihorimbere V, Legrève A, Ongena M. Unravelling the secondary metabolome and biocontrol potential of the recently described species Bacillus nakamurai. Microbiol Res 2024; 288:127841. [PMID: 39153465 DOI: 10.1016/j.micres.2024.127841] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/22/2024] [Revised: 07/02/2024] [Accepted: 07/14/2024] [Indexed: 08/19/2024]
Abstract
In the prospect of novel potential biocontrol agents, a new strain BDI-IS1 belonging to the recently described Bacillus nakamurai was selected for its strong in vitro antimicrobial activities against a range of bacterial and fungal phytopathogens. Genome mining coupled with metabolomics revealed that BDI-IS1 produces multiple non-ribosomal secondary metabolites including surfactin, iturin A, bacillaene, bacillibactin and bacilysin, together with some some ribosomally-synthesized and post-translationally modified peptides (RiPPs) such as plantazolicin, and potentially amylocyclicin, bacinapeptin and LCI. Reverse genetics further showed the specific involvement of some of these compounds in the antagonistic activity of the strain. Comparative genomics between the five already sequenced B. nakamurai strains showed that non-ribosomal products constitute the core metabolome of the species while RiPPs are more strain-specific. Although the secondary metabolome lacks some key bioactive metabolites found in B. velezensis, greenhouse experiments show that B. nakamurai BDI-IS1 is able to protect tomato and maize plants against early blight and northern leaf blight caused by Alternaria solani and Exserohilum turcicum, respectively, at levels similar to or better than B. velezensis QST713. The reduction of these foliar diseases, following root or leaf application of the bacterial suspension demonstrates that BDI-IS1 can act by direct antibiosis and by inducing plant defence mechanisms. These findings indicate that B. nakamurai BDI-IS1 can be considered as a good candidate for biocontrol of plant diseases prevailing in tropical regions, and encourage further research into its spectrum of activity, its requirements and the conditions needed to ensure its efficacy.
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Affiliation(s)
- François Nimbeshaho
- Microbial Processes and Interactions (MiPI), Teaching and Research Centre (TERRA), Gembloux Agro-BioTech, University of Liège, Avenue de la Faculté 2B, Gembloux 5030, Belgium; Laboratoire de Nutrition-Phytochimie, d'Ecologie et d'Environnement Appliquée, Centre Universitaire de Recherche et de Pédagogie Appliquées aux Sciences, Institut de Pédagogie Appliquée, Université du Burundi, Avenue de l'Unesco 2, P.O Box 1550, Bujumbura, Burundi.
| | - Gaspard Nihorimbere
- Earth and Life Institute-Applied Microbiology, Université Catholique de Louvain, Croix du Sud 2, Louvain-la-Neuve 1348, Belgium; Research department, Institut des Sciences Agronomiques du Burundi (ISABU), Boulevard du Japon, Rohero 1, P.O Box 795, Bujumbura, Burundi.
| | - Anthony Argüelles Arias
- Microbial Processes and Interactions (MiPI), Teaching and Research Centre (TERRA), Gembloux Agro-BioTech, University of Liège, Avenue de la Faculté 2B, Gembloux 5030, Belgium.
| | - Charlotte Liénard
- Earth and Life Institute-Applied Microbiology, Université Catholique de Louvain, Croix du Sud 2, Louvain-la-Neuve 1348, Belgium.
| | - Sébastien Steels
- Microbial Processes and Interactions (MiPI), Teaching and Research Centre (TERRA), Gembloux Agro-BioTech, University of Liège, Avenue de la Faculté 2B, Gembloux 5030, Belgium.
| | - Anaclet Nibasumba
- Institut Supérieur de Formation Agricole, Université du Burundi, P.O Box 241, Gitega, Burundi.
| | - Venant Nihorimbere
- Laboratoire de Microbiologie, Faculté d'Agronomie et de BioIngéniérie (FABI), Université du Burundi, Avenue de l'Unesco 2, P.O Box 2940, Bujumbura, Burundi.
| | - Anne Legrève
- Earth and Life Institute-Applied Microbiology, Université Catholique de Louvain, Croix du Sud 2, Louvain-la-Neuve 1348, Belgium.
| | - Marc Ongena
- Microbial Processes and Interactions (MiPI), Teaching and Research Centre (TERRA), Gembloux Agro-BioTech, University of Liège, Avenue de la Faculté 2B, Gembloux 5030, Belgium.
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Botcazon C, Ramos-Martín F, Rodríguez-Moraga N, Bergia T, Acket S, Sarazin C, Rippa S. Rhamnolipids and fengycins interact differently with biomimetic lipid membrane models of Botrytis cinerea and Sclerotinia sclerotiorum: Lipidomics profiles and biophysical studies. Biophys Chem 2024; 314:107305. [PMID: 39154582 DOI: 10.1016/j.bpc.2024.107305] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2024] [Revised: 07/03/2024] [Accepted: 07/25/2024] [Indexed: 08/20/2024]
Abstract
Rhamnolipids (RLs) and Fengycins (FGs) are biosurfactants with very promising antifungal properties proposed to reduce the use of synthetic pesticides in crops. They are amphiphilic molecules, both known to target the plasma membrane. They act differently on Botrytis cinerea and Sclerotinia sclerotiorum, two close Sclerotiniaceae phytopathogenic fungi. RLs are more efficient at permeabilizing S. sclerotiorum, and FGs are more efficient at permeabilizing B. cinerea mycelial cells. To study the link between the lipid membrane composition and the activity of RLs and FGs, we analyzed the lipid profiles of B. cinerea and S. sclerotiorum. We determined that unsaturated or saturated C18 and saturated C16 fatty acids are predominant in both fungi. We also showed that phosphatidylethanolamine (PE), phosphatidic acid (PA), and phosphatidylcholine (PC) are the main phospholipids (in this order) in both fungi, with more PA and less PC in S. sclerotiorum. The results were used to build biomimetic lipid membrane models of B. cinerea and S. sclerotiorum for all-atom molecular dynamic simulations and solid-state NMR experiments to more deeply study the interactions between RLs or FGs with different compositions of lipid bilayers. Distinctive effects are exerted by both compounds. RLs completely insert in all the studied model membranes with a fluidification effect. FGs tend to form aggregates out of the bilayer and insert individually more easily into the models representative of B. cinerea than those of S. sclerotiorum, with a higher fluidification effect. These results provide new insights into the lipid composition of closely related fungi and its impact on the mode of action of very promising membranotropic antifungal molecules for agricultural applications.
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Affiliation(s)
- Camille Botcazon
- Unité Génie Enzymatique et Cellulaire, CNRS, UMR 7025, Alliance Sorbonne Université, Université de technologie de Compiègne, Compiègne, France
| | - Francisco Ramos-Martín
- Unité Génie Enzymatique et Cellulaire, CNRS, UMR 7025, Université de Picardie Jules Verne, Amiens, France
| | - Nely Rodríguez-Moraga
- Unité Génie Enzymatique et Cellulaire, CNRS, UMR 7025, Université de Picardie Jules Verne, Amiens, France
| | - Thomas Bergia
- Unité Génie Enzymatique et Cellulaire, CNRS, UMR 7025, Alliance Sorbonne Université, Université de technologie de Compiègne, Compiègne, France
| | - Sébastien Acket
- Unité Génie Enzymatique et Cellulaire, CNRS, UMR 7025, Alliance Sorbonne Université, Université de technologie de Compiègne, Compiègne, France
| | - Catherine Sarazin
- Unité Génie Enzymatique et Cellulaire, CNRS, UMR 7025, Université de Picardie Jules Verne, Amiens, France.
| | - Sonia Rippa
- Unité Génie Enzymatique et Cellulaire, CNRS, UMR 7025, Alliance Sorbonne Université, Université de technologie de Compiègne, Compiègne, France.
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Thomidis T, Damos P. Sustainable Management of Tetranychus urticae and Trialeurodes vaporariorum on Tomato and Cucumber Plants Using Rhamnolipids and Essential Oil-Based Biocontrol Agents. INSECTS 2024; 15:720. [PMID: 39336688 PMCID: PMC11431958 DOI: 10.3390/insects15090720] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/13/2024] [Revised: 09/17/2024] [Accepted: 09/18/2024] [Indexed: 09/30/2024]
Abstract
Rhamnolipids (RLs), biosurfactants produced by Pseudomonas aeruginosa, have gained attention for their potential role in pest management. This study investigated the efficacy of RLs in controlling the two-spotted spider mite (Tetranychus urticae) and the whitefly (Trialeurodes vaporariorum), as well as a novel non-commercial essential oil-based product, Petir Kilat, on cucumber and tomato plants within a controlled greenhouse environment. The RLs were tested at concentrations of 1 mL/L and 2 mL/L, compared to commercial biopesticides including abamectin (ABAMAX) and Beauveria bassiana (NATURALIS). The results indicated that ABAMAX achieved the highest mortality rates for T. urticae and T. vaporariorum, with 100% mortality observed at 7 days. NATURALIS was also highly effective, particularly for whiteflies, though its efficacy declined over time. RLs showed a dose-dependent increase in mortality, with the higher concentration (2 mL/L) yielding more promising results, though not surpassing the commercial products. Petir Kilat, derived from orange essential oils, demonstrated significant control, particularly at higher concentrations, comparable to or exceeding the effectiveness of NATURALIS and ABAMAX in some cases. Statistical analyses revealed significant differences between treatments in most cases (p < 0.05). The findings underscore the potential of RLs and Petir Kilat as components of integrated pest management (IPM) strategies. While RLs are effective, their performance suggests they are best used in combination with other control methods. The study highlights the need for further research to optimize the application of RLs and essential oil-based products to enhance their role in sustainable pest management practices.
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Affiliation(s)
- Thomas Thomidis
- Department of Human Nutrition and Dietetics, International Hellenic University, 57001 Thessaloniki, Greece
| | - Petros Damos
- Directorate of Secondary Education of Veroia, Ministry of Education, Religious Affairs and Sports, 59132 Ergohori, Greece;
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Lourenço M, Duarte N, Ribeiro IAC. Exploring Biosurfactants as Antimicrobial Approaches. Pharmaceuticals (Basel) 2024; 17:1239. [PMID: 39338401 PMCID: PMC11434949 DOI: 10.3390/ph17091239] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2024] [Revised: 09/12/2024] [Accepted: 09/17/2024] [Indexed: 09/30/2024] Open
Abstract
Antibacterial resistance is one of the most important global threats to human health. Several studies have been performed to overcome this problem and infection-preventive approaches appear as promising solutions. Novel antimicrobial preventive molecules are needed and microbial biosurfactants have been explored in that scope. Considering their structure, these biomolecules can be divided into different classes, glycolipids and lipopeptides being the most studied. Besides their antimicrobial activity, biosurfactants have the advantage of being biocompatible, biodegradable, and non-toxic, which favor their application in several areas, including the health sector. Often, the most difficult infections to fight are associated with biofilm formation, particularly in medical devices. Strategies to overcome micro-organism attachment are thus emergent, and it is possible to take advantage of the antimicrobial/antibiofilm properties of biosurfactants to produce surfaces that are more resistant to the deposition/attachment of bacteria. Approaches such as the covalent bond of biosurfactants to the medical device surface leading to repulsive physical-chemical interactions or contact killing can be selected. Simpler strategies such as the absorption of biosurfactants on surfaces are also possible, eliminating micro-organisms in the vicinity. This review will focus on the physical and chemical characteristics of biosurfactants, their antimicrobial activity, antimicrobial/antibiofilm approaches, and finally on their structure-activity relationship.
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Affiliation(s)
| | - Noélia Duarte
- Research Institute for Medicines (iMed.ULisboa), Faculty of Pharmacy, Universidade de Lisboa, Avenida Prof. Gama Pinto, 1649-003 Lisboa, Portugal;
| | - Isabel A. C. Ribeiro
- Research Institute for Medicines (iMed.ULisboa), Faculty of Pharmacy, Universidade de Lisboa, Avenida Prof. Gama Pinto, 1649-003 Lisboa, Portugal;
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Fomitcheva V, Strauch CJ, Bonse S, Bauer P, Kühne T, Niehl A. Bio-control of soil-borne virus infection by seed application of Glycyrrhiza glabra extract and the rhamnolipid Rhapynal. PLANTA 2024; 260:94. [PMID: 39269658 PMCID: PMC11399307 DOI: 10.1007/s00425-024-04529-5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/29/2024] [Accepted: 09/04/2024] [Indexed: 09/15/2024]
Abstract
MAIN CONCLUSION Seed-application of the natural products protects sugar beet and wheat plants against infection with plasmodiophorid-transmitted viruses and thus may represent an efficient, environmentally friendly, easy and cost effective biocontrol strategy. In times of intensive agriculture, resource shortening and climate change, alternative, more sustainable and eco-friendly plant protection strategies are required. Here, we tested the potential of the natural plant substances Glycyrrhiza glabra leaf extract (GE) and the rhamnolipid Rhapynal (Rha) applied to seeds to protect against infection of sugar beet and wheat with soil-borne plant viruses. The soil-borne Polymyxa betae- and Polymyxa graminis-transmitted viruses cause extensive crop losses in agriculture and efficient control strategies are missing. We show that GE and Rha both efficiently protect plants against infection with soil-borne viruses in sugar beet and wheat when applied to seeds. Moreover, the antiviral protection effect is independent of the cultivar used. No protection against Polymyxa sp. was observed after seed treatment with the bio-substances at our analysis time points. However, when we applied the bio-substances directly to soil a significant anti-Polymyxa graminis effect was obtained in roots of barley plants grown in the soil as well as in the treated soil. Despite germination can be affected by high concentrations of the substances, a range of antiviral protection conditions with no effect on germination were identified. Seed-treatment with the bio-substances did not negatively affect plant growth and development in virus-containing soil, but was rather beneficial for plant growth. We conclude that seed treatment with GE and Rha may represent an efficient, ecologically friendly, non-toxic, easy to apply and cost efficient biocontrol measure against soil-borne virus infection in plants.
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Affiliation(s)
- Viktoria Fomitcheva
- Institute for Epidemiology and Pathogen Diagnostics, Julius Kühn Institute (JKI), Federal Research Centre for Cultivated Plants, Messeweg 11-12, Brunswick, Germany
| | - Claudia J Strauch
- Institute for Epidemiology and Pathogen Diagnostics, Julius Kühn Institute (JKI), Federal Research Centre for Cultivated Plants, Messeweg 11-12, Brunswick, Germany
| | - Sabine Bonse
- Institute for Epidemiology and Pathogen Diagnostics, Julius Kühn Institute (JKI), Federal Research Centre for Cultivated Plants, Messeweg 11-12, Brunswick, Germany
| | - Petra Bauer
- Institute for Epidemiology and Pathogen Diagnostics, Julius Kühn Institute (JKI), Federal Research Centre for Cultivated Plants, Messeweg 11-12, Brunswick, Germany
| | - Thomas Kühne
- Institute for Epidemiology and Pathogen Diagnostics, Julius Kühn Institute (JKI), Federal Research Centre for Cultivated Plants, Messeweg 11-12, Brunswick, Germany
| | - Annette Niehl
- Institute for Epidemiology and Pathogen Diagnostics, Julius Kühn Institute (JKI), Federal Research Centre for Cultivated Plants, Messeweg 11-12, Brunswick, Germany.
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Kenfaoui J, Dutilloy E, Benchlih S, Lahlali R, Ait-Barka E, Esmaeel Q. Bacillus velezensis: a versatile ally in the battle against phytopathogens-insights and prospects. Appl Microbiol Biotechnol 2024; 108:439. [PMID: 39145847 PMCID: PMC11327198 DOI: 10.1007/s00253-024-13255-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/15/2024] [Revised: 07/11/2024] [Accepted: 07/15/2024] [Indexed: 08/16/2024]
Abstract
The escalating interest in Bacillus velezensis as a biocontrol agent arises from its demonstrated efficacy in inhibiting both phytopathogenic fungi and bacteria, positioning it as a promising candidate for biotechnological applications. This mini review aims to offer a comprehensive exploration of the multifaceted properties of B. velezensis, with particular focus on its beneficial interactions with plants and its potential for controlling phytopathogenic fungi. The molecular dialogues involving B. velezensis, plants, and phytopathogens are scrutinized to underscore the intricate mechanisms orchestrating these interactions. Additionally, the review elucidates the mode of action of B. velezensis, particularly through cyclic lipopeptides, highlighting their importance in biocontrol and promoting plant growth. The agricultural applications of B. velezensis are detailed, showcasing its role in enhancing crop health and productivity while reducing reliance on chemical pesticides. Furthermore, the review extends its purview in the industrial and environmental arenas, highlighting its versatility across various sectors. By addressing challenges such as formulation optimization and regulatory frameworks, the review aims to chart a course for the effective utilization of B. velezensis. KEY POINTS: • B. velezensis fights phytopathogens, boosting biotech potential • B. velezensis shapes agri-biotech future, offers sustainable solutions • Explores plant-B. velezensis dialogue, lipopeptide potential showcased.
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Affiliation(s)
- Jihane Kenfaoui
- Université de Reims Champagne Ardenne, INRAE, RIBP USC 1488, 51100, Reims, France
| | - Emma Dutilloy
- Université de Reims Champagne Ardenne, INRAE, RIBP USC 1488, 51100, Reims, France
- Microbial Processes and Interactions Laboratory, Terra Teaching and Research Center, Gembloux Agro-Bio Tech, University of Liège, Gembloux, Belgium
| | - Salma Benchlih
- Université de Reims Champagne Ardenne, INRAE, RIBP USC 1488, 51100, Reims, France
| | - Rachid Lahlali
- Department of Plant Protection, Phytopathology Unit, Ecole Nationale d'Agriculture de Meknès, Km10, Rte Haj Kaddour, BP S/40, 50001, Meknes, Morocco
| | - Essaid Ait-Barka
- Université de Reims Champagne Ardenne, INRAE, RIBP USC 1488, 51100, Reims, France
| | - Qassim Esmaeel
- Université de Reims Champagne Ardenne, INRAE, RIBP USC 1488, 51100, Reims, France.
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Firdose A, Maeda T, Sukri MAM, Yasin NHM, Sabturani N, Aqma WS. Antibacterial mechanism of Pseudomonas aeruginosa UKMP14T rhamnolipids against multidrug resistant Acinetobacter baumannii. Microb Pathog 2024; 193:106743. [PMID: 38879138 DOI: 10.1016/j.micpath.2024.106743] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/19/2023] [Revised: 06/06/2024] [Accepted: 06/11/2024] [Indexed: 06/21/2024]
Abstract
Rhamnolipids, a major category of glycolipid biosurfactant, have recently gained enormous attention in medical field because of their relevance as effective antibacterial agents against a wide variety of pathogenic bacteria. Our previous studies have shown that rhamnolipids from an environmental isolate of Pseudomonas aeruginosa UKMP14T possess antibacterial, anti-adhesive and anti-biofilm activity against multidrug-resistant ESKAPE (Enterococcus faecium, Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter baumannii, Pseudomonas aeruginosa and Enterobacter sp.) pathogens. However, the mechanism of their antibacterial action remains unclear. Thus, this study aimed to elucidate the mechanism of the antibacterial action of P. aeruginosa UKMP14T rhamnolipids by studying the changes in cells of one of the ESKAPE pathogens, Acinetobacter baumannii, which is the most difficult strain to kill. Results revealed that rhamnolipid treatment rendered A. baumannii cells more hydrophobic as evaluated through contact angle measurements. It also induced the release of cellular proteins measuring 510 μg/mL at a rhamnolipid concentration of 1000 μg/mL. In addition, rhamnolipids were found to be bactericidal in their action as they could permeate the inner membranes, leading to a leak-out of nucleotides. More than 50 % of the cells were found to be killed upon 1000 μg/mL rhamnolipid treatment as observed through fluorescence microscopy. Other cellular changes such as irregular shape and size, membrane perturbations, clumping, shrinkage and physical damage were clearly visible in SEM, FESEM and laser micrographs. Furthermore, rhamnolipid treatment inhibited the levels of acyl-homoserine lactones (AHLs) in A. baumannii, which are vital for their biofilm formation and virulence. The obtained results indicate that P. aeruginosa UKMP14T rhamnolipids target outer and inner bacterial membranes through permeation, including physical damage to the cells, leading to cell leakage. Furthermore, AHL inhibition appears to be the mechanism behind their anti-biofilm action. All these observations can be correlated to rhamnolipids' antibacterial effect against A. baumannii.
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Affiliation(s)
- Ayesha Firdose
- Department of Biological Sciences & Biotechnology, Faculty of Science & Technology, Universiti Kebangsaan Malaysia, 46300 Bangi, Selangor, Malaysia.
| | - Toshinari Maeda
- Department of Biological Functions Engineering, Graduate School of Life Science and Systems Engineering, Kyushu Institute of Technology, 2-4 Hibikino, Wakamatsu-ku, Kitakyushu 808-0196, Japan
| | - Mohd Asif Mohd Sukri
- Department of Biological Sciences & Biotechnology, Faculty of Science & Technology, Universiti Kebangsaan Malaysia, 46300 Bangi, Selangor, Malaysia
| | - Nazlina Haiza Mohd Yasin
- Department of Biological Sciences & Biotechnology, Faculty of Science & Technology, Universiti Kebangsaan Malaysia, 46300 Bangi, Selangor, Malaysia
| | - Noramiza Sabturani
- Department of Biological Sciences & Biotechnology, Faculty of Science & Technology, Universiti Kebangsaan Malaysia, 46300 Bangi, Selangor, Malaysia
| | - Wan Syaidatul Aqma
- Department of Biological Sciences & Biotechnology, Faculty of Science & Technology, Universiti Kebangsaan Malaysia, 46300 Bangi, Selangor, Malaysia.
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Brauer EK, Bosnich W, Holy K, Thapa I, Krishnan S, Moatter Syed, Bredow M, Sproule A, Power M, Johnston A, Cloutier M, Haribabu N, Izhar U H Khan, Diallo JS, Monaghan J, Chabot D, Overy DP, Subramaniam R, Piñeros M, Blackwell B, Harris LJ. A cyclic lipopeptide from Fusarium graminearum targets plant membranes to promote virulence. Cell Rep 2024; 43:114384. [PMID: 38970790 DOI: 10.1016/j.celrep.2024.114384] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/03/2023] [Revised: 03/01/2024] [Accepted: 06/04/2024] [Indexed: 07/08/2024] Open
Abstract
Microbial plant pathogens deploy amphipathic cyclic lipopeptides to reduce surface tension in their environment. While plants can detect these molecules to activate cellular stress responses, the role of these lipopeptides or associated host responses in pathogenesis are not fully clear. The gramillin cyclic lipopeptide is produced by the Fusarium graminearum fungus and is a virulence factor and toxin in maize. Here, we show that gramillin promotes virulence and necrosis in both monocots and dicots by disrupting ion balance across membranes. Gramillin is a cation-conducting ionophore and causes plasma membrane depolarization. This disruption triggers cellular signaling, including a burst of reactive oxygen species (ROS), transcriptional reprogramming, and callose production. Gramillin-induced ROS depends on expression of host ILK1 and RBOHD genes, which promote fungal induction of virulence genes during infection and host susceptibility. We conclude that gramillin's ionophore activity targets plant membranes to coordinate attack by the F. graminearum fungus.
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Affiliation(s)
- Elizabeth K Brauer
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada; Department of Biology, University of Ottawa, Ottawa, ON K1N 9A7, Canada.
| | - Whynn Bosnich
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada
| | - Kirsten Holy
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada
| | - Indira Thapa
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada
| | - Srinivasan Krishnan
- Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, NY 14853, USA
| | - Moatter Syed
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada; Department of Biology, University of Ottawa, Ottawa, ON K1N 9A7, Canada
| | - Melissa Bredow
- Biology Department, Queen's University, Biological Sciences Complex, 116 Barrie St., Kingston, ON K7L 3N6, Canada
| | - Amanda Sproule
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada
| | - Monique Power
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada; Department of Biology, University of Ottawa, Ottawa, ON K1N 9A7, Canada
| | - Anne Johnston
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada
| | - Michel Cloutier
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada
| | - Naveen Haribabu
- Ottawa Hospital Research Institute, 501 Smyth Road, Ottawa, ON K1H 8L6, Canada
| | - Izhar U H Khan
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada
| | - Jean-Simon Diallo
- Ottawa Hospital Research Institute, 501 Smyth Road, Ottawa, ON K1H 8L6, Canada
| | - Jacqueline Monaghan
- Biology Department, Queen's University, Biological Sciences Complex, 116 Barrie St., Kingston, ON K7L 3N6, Canada
| | - Denise Chabot
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada
| | - David P Overy
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada
| | - Rajagopal Subramaniam
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada
| | - Miguel Piñeros
- Boyce Thompson Institute for Plant Research, Cornell University, Ithaca, NY 14853, USA; Robert W. Holley Center for Agriculture and Health, United States Department of Agriculture-Agricultural Research Service, Cornell University, Ithaca, NY 14853, USA
| | - Barbara Blackwell
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada
| | - Linda J Harris
- Ottawa Research and Development Center, Agriculture and Agri-Food Canada, Ottawa, ON K1A 0C6, Canada
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Morandini L, Caulier S, Bragard C, Mahillon J. Bacillus cereus sensu lato antimicrobial arsenal: An overview. Microbiol Res 2024; 283:127697. [PMID: 38522411 DOI: 10.1016/j.micres.2024.127697] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/17/2023] [Revised: 02/25/2024] [Accepted: 03/16/2024] [Indexed: 03/26/2024]
Abstract
The Bacillus cereus group contains genetically closed bacteria displaying a variety of phenotypic features and lifestyles. The group is mainly known through the properties of three major species: the entomopathogen Bacillus thuringiensis, the animal and human pathogen Bacillus anthracis and the foodborne opportunistic strains of B. cereus sensu stricto. Yet, the actual diversity of the group is far broader and includes multiple lifestyles. Another less-appreciated aspect of B. cereus members lies within their antimicrobial potential which deserves consideration in the context of growing emergence of resistance to antibiotics and pesticides, and makes it crucial to find new sources of antimicrobial molecules. This review presents the state of knowledge on the known antimicrobial compounds of the B. cereus group members, which are grouped according to their chemical features and biosynthetic pathways. The objective is to provide a comprehensive review of the antimicrobial range exhibited by this group of bacteria, underscoring the interest in its potent biocontrol arsenal and encouraging further research in this regard.
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Affiliation(s)
| | - Simon Caulier
- Laboratory of Plant Health, Earth and Life Institute, UCLouvain, Louvain-la-Neuve B-1348, Belgium
| | - Claude Bragard
- Laboratory of Plant Health, Earth and Life Institute, UCLouvain, Louvain-la-Neuve B-1348, Belgium
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10
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Rocha TM, Marcelino PRF, Antunes FAF, Sánchez-Muñoz S, Dos Santos JC, da Silva SS. Biocompatibility of Brazilian native yeast-derived sophorolipids and Trichoderma harzianum as plant-growth promoting bioformulations. Microbiol Res 2024; 283:127689. [PMID: 38493529 DOI: 10.1016/j.micres.2024.127689] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/16/2024] [Revised: 03/04/2024] [Accepted: 03/07/2024] [Indexed: 03/19/2024]
Abstract
The replacement of agrochemicals by biomolecules is imperative to mitigate soil contamination and inactivation of its core microbiota. Within this context, this study aimed at the interaction between a biological control agent such as Trichoderma harzianum CCT 2160 (BF-Th) and the biosurfactants (BSs) derived from the native Brazilian yeast Starmerella bombicola UFMG-CM-Y6419. Thereafter, their potential in germination of Oryza sativa L. seeds was tested. Both bioproducts were produced on site and characterized according to their chemical composition by HPLC-MS and GC-MS for BSs and SDS-PAGE gel for BF-Th. The BSs were confirmed to be sophorolipids (SLs) which is a well-studied compound with antimicrobial activity. The biocompatibility was examined by cultivating the fungus with SLs supplementation ranging from 0.1 to 2 g/L in solid and submerged fermentation. In solid state fermentation the supplementation of SLs enhanced spore production, conferring the synergy of both bioproducts. For the germination assays, bioformulations composed of SLs, BF-Th and combined (SLT) were applied in the germination of O. sativa L seeds achieving an improvement of up to 30% in morphological aspects such as root and shoot size as well as the presence of lateral roots. It was hypothesized that SLs were able to regulate phytohormones expression such as auxins and gibberellins during early stage of growth, pointing to their novel plant-growth stimulating properties. Thus, this study has pointed to the potential of hybrid bioformulations composed of biosurfactants and active endophytic fungal spores in order to augment the plant fitness and possibly the control of diseases.
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Affiliation(s)
- Thiago Moura Rocha
- Department of Industrial Biotechnology, Laboratory of bioprocesses and Sustainable Bioproducts (Lbios), University of São Paulo - Engineering School of Lorena, Lorena, SP, Brazil.
| | - Paulo Ricardo Franco Marcelino
- Department of Industrial Biotechnology, Laboratory of bioprocesses and Sustainable Bioproducts (Lbios), University of São Paulo - Engineering School of Lorena, Lorena, SP, Brazil
| | - Felipe Antonio Fernandes Antunes
- Department of Industrial Biotechnology, Laboratory of bioprocesses and Sustainable Bioproducts (Lbios), University of São Paulo - Engineering School of Lorena, Lorena, SP, Brazil
| | - Salvador Sánchez-Muñoz
- Department of Industrial Biotechnology, Laboratory of bioprocesses and Sustainable Bioproducts (Lbios), University of São Paulo - Engineering School of Lorena, Lorena, SP, Brazil
| | - Júlio César Dos Santos
- Department of Industrial Biotechnology, Laboratory of bioprocesses and Sustainable Bioproducts (Lbios), University of São Paulo - Engineering School of Lorena, Lorena, SP, Brazil
| | - Silvio Silvério da Silva
- Department of Industrial Biotechnology, Laboratory of bioprocesses and Sustainable Bioproducts (Lbios), University of São Paulo - Engineering School of Lorena, Lorena, SP, Brazil
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11
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Dini S, Bekhit AEDA, Roohinejad S, Vale JM, Agyei D. The Physicochemical and Functional Properties of Biosurfactants: A Review. Molecules 2024; 29:2544. [PMID: 38893420 PMCID: PMC11173842 DOI: 10.3390/molecules29112544] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/05/2024] [Revised: 05/20/2024] [Accepted: 05/20/2024] [Indexed: 06/21/2024] Open
Abstract
Surfactants, also known as surface-active agents, have emerged as an important class of compounds with a wide range of applications. However, the use of chemical-derived surfactants must be restricted due to their potential adverse impact on the ecosystem and the health of human and other living organisms. In the past few years, there has been a growing inclination towards natural-derived alternatives, particularly microbial surfactants, as substitutes for synthetic or chemical-based counterparts. Microbial biosurfactants are abundantly found in bacterial species, predominantly Bacillus spp. and Pseudomonas spp. The chemical structures of biosurfactants involve the complexation of lipids with carbohydrates (glycolipoproteins and glycolipids), peptides (lipopeptides), and phosphates (phospholipids). Lipopeptides, in particular, have been the subject of extensive research due to their versatile properties, including emulsifying, antimicrobial, anticancer, and anti-inflammatory properties. This review provides an update on research progress in the classification of surfactants. Furthermore, it explores various bacterial biosurfactants and their functionalities, along with their advantages over synthetic surfactants. Finally, the potential applications of these biosurfactants in many industries and insights into future research directions are discussed.
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Affiliation(s)
- Salome Dini
- Department of Food Science, University of Otago, Dunedin 9054, New Zealand; (S.D.); (A.E.-D.A.B.)
| | - Alaa El-Din A. Bekhit
- Department of Food Science, University of Otago, Dunedin 9054, New Zealand; (S.D.); (A.E.-D.A.B.)
| | - Shahin Roohinejad
- Research and Development Division, Zoom Essence Inc., 1131 Victory Place, Hebron, KY 41048, USA (J.M.V.)
| | - Jim M. Vale
- Research and Development Division, Zoom Essence Inc., 1131 Victory Place, Hebron, KY 41048, USA (J.M.V.)
| | - Dominic Agyei
- Department of Food Science, University of Otago, Dunedin 9054, New Zealand; (S.D.); (A.E.-D.A.B.)
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12
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Gilliard G, Demortier T, Boubsi F, Jijakli MH, Ongena M, De Clerck C, Deleu M. Deciphering the distinct biocontrol activities of lipopeptides fengycin and surfactin through their differential impact on lipid membranes. Colloids Surf B Biointerfaces 2024; 239:113933. [PMID: 38729019 DOI: 10.1016/j.colsurfb.2024.113933] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Revised: 04/24/2024] [Accepted: 04/26/2024] [Indexed: 05/12/2024]
Abstract
Lipopeptides produced by beneficial bacilli present promising alternatives to chemical pesticides for plant biocontrol purposes. Our research explores the distinct plant biocontrol activities of lipopeptides surfactin (SRF) and fengycin (FGC) by examining their interactions with lipid membranes. Our study shows that FGC exhibits a direct antagonistic activity against Botrytis cinerea and no marked immune-eliciting activity in Arabidopsis thaliana while SRF only demonstrates an ability to stimulate plant immunity. It also reveals that SRF and FGC exhibit diverse effects on membrane integrity and lipid packing. SRF primarily influences membrane physical state without significant membrane permeabilization, while FGC permeabilizes membranes without significantly affecting lipid packing. From our results, we can suggest that the direct antagonistic activity of lipopeptides is linked to their capacity to permeabilize lipid membrane while the stimulation of plant immunity is more likely the result of their ability to alter the mechanical properties of the membrane. Our work also explores how membrane lipid composition modulates the activities of SRF and FGC. Sterols negatively impact both lipopeptides' activities while sphingolipids mitigate the effects on membrane lipid packing but enhance membrane leakage. In conclusion, our findings emphasize the importance of considering both membrane lipid packing and leakage mechanisms in predicting the biological effects of lipopeptides. It also sheds light on the intricate interplay between the membrane composition and the effectiveness of the lipopeptides, providing insights for targeted biocontrol agent design.
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Affiliation(s)
- Guillaume Gilliard
- Laboratory of Molecular Biophysics at Interfaces, UMRt BioEcoAgro 1158 INRAE, TERRA teaching and research centre, Gembloux Agro-Bio Tech, University of Liège, Gembloux 5030, Belgium
| | - Thomas Demortier
- Laboratory of Molecular Biophysics at Interfaces, UMRt BioEcoAgro 1158 INRAE, TERRA teaching and research centre, Gembloux Agro-Bio Tech, University of Liège, Gembloux 5030, Belgium
| | - Farah Boubsi
- Microbial Processes and Interactions laboratory, UMRt BioEcoAgro 1158 INRAE, TERRA teaching and research centre, Gembloux Agro-Bio Tech, University of Liège, Gembloux 5030, Belgium
| | - M Haissam Jijakli
- Integrated and Urban Plant Pathology Laboratory, UMRt BioEcoAgro 1158 INRAE, Gembloux Agro-Bio Tech, University of Liège, Gembloux 5030, Belgium
| | - Marc Ongena
- Microbial Processes and Interactions laboratory, UMRt BioEcoAgro 1158 INRAE, TERRA teaching and research centre, Gembloux Agro-Bio Tech, University of Liège, Gembloux 5030, Belgium
| | - Caroline De Clerck
- AgricultureIsLife, UMRt BioEcoAgro 1158 INRAE, Gembloux Agro-Bio Tech, University of Liège, Gembloux 5030, Belgium
| | - Magali Deleu
- Laboratory of Molecular Biophysics at Interfaces, UMRt BioEcoAgro 1158 INRAE, TERRA teaching and research centre, Gembloux Agro-Bio Tech, University of Liège, Gembloux 5030, Belgium.
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13
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Mukadam H, Gaikwad SV, Kutty NN, Gaikwad VD. Bioformulation of Bacillus proteolyticus MITWPUB1 and its biosurfactant to control the growth of phytopathogen Sclerotium rolfsii for the crop Brassica juncea var local, as a sustainable approach. Front Bioeng Biotechnol 2024; 12:1362679. [PMID: 38707507 PMCID: PMC11066288 DOI: 10.3389/fbioe.2024.1362679] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Accepted: 03/13/2024] [Indexed: 05/07/2024] Open
Abstract
Bacillus proteolyticus MITWPUB1 is a potential producer of biosurfactants (BSs), and the organism is also found to be a producer of plant growth promoting traits, such as hydrogen cyanide and indole acetic acid (IAA), and a solubilizer of phosphate. The BSs were reportedly a blend of two classes, namely glycolipids and lipopeptides, as found by thin layer chromatography and Fourier-transform infrared spectroscopy analysis. Furthermore, semi-targeted metabolite profiling via liquid chromatography mass spectroscopy revealed the presence of phospholipids, lipopeptides, polyamines, IAA derivatives, and carotenoids. The BS showed dose-dependent antagonistic activity against Sclerotium rolfsii; scanning electron microscopy showed the effects of the BS on S. rolfsii in terms of mycelial deformations and reduced branching patterns. In vitro studies showed that the application of B. proteolyticus MITWPUB1 and its biosurfactant to seeds of Brassica juncea var local enhanced the seed germination rate. However, sawdust-carrier-based bioformulation with B. proteolyticus MITWPUB1 and its BS showed increased growth parameters for B. juncea var L. This study highlights a unique bioformulation combination that controls the growth of the phytopathogen S. rolfsii and enhances the plant growth of B. juncea var L. Bacillus proteolyticus MITWPUB1 was also shown for the first time to be a prominent BS producer with the ability to control the growth of the phytopathogen S. rolfsii.
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Affiliation(s)
- Humaira Mukadam
- Department of Biosciences and Technology, School of Science and Environment Studies, Faculty of Science and Health Science, Dr. Vishwanath Karad MIT World Peace University, Pune, Maharashtra, India
| | - Shikha V. Gaikwad
- Department of Biosciences and Technology, School of Science and Environment Studies, Faculty of Science and Health Science, Dr. Vishwanath Karad MIT World Peace University, Pune, Maharashtra, India
| | - Nithya N. Kutty
- Department of Biosciences and Technology, School of Science and Environment Studies, Faculty of Science and Health Science, Dr. Vishwanath Karad MIT World Peace University, Pune, Maharashtra, India
| | - Vikrant D. Gaikwad
- Department of Chemical Engineering, School of Engineering and Technology, Faculty of Engineering, Dr. Vishwanath Karad MIT World Peace University, Pune, Maharashtra, India
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14
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Dinango VN, Dhouib H, Wakam LN, Kouokap LK, Youmbi DY, Eke P, Driss F, Tounsi S, Boyom FF, Frikha-Gargouri O. Bacterial endophytes inhabiting desert plants provide protection against seed rot caused by Fusarium verticillioides and promote growth in maize. PEST MANAGEMENT SCIENCE 2024; 80:1206-1218. [PMID: 37886813 DOI: 10.1002/ps.7850] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/08/2023] [Revised: 10/05/2023] [Accepted: 10/21/2023] [Indexed: 10/28/2023]
Abstract
BACKGROUND Fusarium maize ear and root rot disease caused by Fusarium verticillioides has become one of the most serious fungal diseases associated with maize production. Due to their abilities to promote plant development and manage diseases, bacterial endophytes provide a more promising approach for treating this vascular disease. RESULTS This work was undertaken for the selection and identification of promising isolates as plant growth promoters and biocontrol agents against F. verticillioides in maize agroecosystems. A screening procedure consisting of in vitro and in situ tests was applied to 27 endophytic strains originating from desert plants: Euphorbia antiquorum, Calotropis procera, and Alcasia albida. In vitro studies indicated that the bacteria exhibited variable results in biocontrol, endophytism, and plant growth-promoting traits. In addition, in situ plant growth promotion and biocontrol experiments allowed the identification of the most promising bacterial endophytes. In vitro and in situ comparative study results indicated a low correlation. Our data revealed that in situ screening must be used as the method of selection of biocontrol agents against Fusarium ear and root rot disease. Based on in situ results, seven potent strains were selected and identified as Bacillus subtilis, Bacillus velezensis, Bacillus tequilensis, Stenotrophomonas maltophilia, and Klebsiella pneumoniae. CONCLUSION The results of this study showed that the selected strains seem to be promising candidates to be exploited as biofertilizers and biocontrol agents against Fusarium maize ear and root rot disease. © 2023 Society of Chemical Industry.
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Affiliation(s)
- Vanessa Nya Dinango
- Antimicrobial & Biocontrol Agents Unit (AmBcAU), Laboratory for Phytobiochemistry and Medicinal Plants Studies, Department of Biochemistry, University of Yaoundé I, Yaoundé, Cameroon
| | - Hanen Dhouib
- Laboratory of Biopesticides, Centre of Biotechnology of Sfax, Sfax University, Sfax, Tunisia
| | - Louise Nana Wakam
- Antimicrobial & Biocontrol Agents Unit (AmBcAU), Laboratory for Phytobiochemistry and Medicinal Plants Studies, Department of Biochemistry, University of Yaoundé I, Yaoundé, Cameroon
- Soil Microbiology Laboratory, Biotechnology Centre, Yaoundé, Cameroon
| | - Lanvin Kepngop Kouokap
- Antimicrobial & Biocontrol Agents Unit (AmBcAU), Laboratory for Phytobiochemistry and Medicinal Plants Studies, Department of Biochemistry, University of Yaoundé I, Yaoundé, Cameroon
| | - Diane Yimta Youmbi
- Antimicrobial & Biocontrol Agents Unit (AmBcAU), Laboratory for Phytobiochemistry and Medicinal Plants Studies, Department of Biochemistry, University of Yaoundé I, Yaoundé, Cameroon
| | - Pierre Eke
- College of Technology, Department of Crop Production Technology, University of Bamenda, Bambili, Cameroon
| | - Fatma Driss
- Laboratory of Biopesticides, Centre of Biotechnology of Sfax, Sfax University, Sfax, Tunisia
| | - Slim Tounsi
- Laboratory of Biopesticides, Centre of Biotechnology of Sfax, Sfax University, Sfax, Tunisia
| | - Fabrice Fekam Boyom
- Antimicrobial & Biocontrol Agents Unit (AmBcAU), Laboratory for Phytobiochemistry and Medicinal Plants Studies, Department of Biochemistry, University of Yaoundé I, Yaoundé, Cameroon
| | - Olfa Frikha-Gargouri
- Laboratory of Biopesticides, Centre of Biotechnology of Sfax, Sfax University, Sfax, Tunisia
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15
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Parus A, Ciesielski T, Woźniak-Karczewska M, Ławniczak Ł, Janeda M, Ślachciński M, Radzikowska-Kujawska D, Owsianiak M, Marecik R, Loibner AP, Heipieper HJ, Chrzanowski Ł. Critical evaluation of the performance of rhamnolipids as surfactants for (phyto)extraction of Cd, Cu, Fe, Pb and Zn from copper smelter-affected soil. THE SCIENCE OF THE TOTAL ENVIRONMENT 2024; 912:168382. [PMID: 37963537 DOI: 10.1016/j.scitotenv.2023.168382] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/31/2023] [Revised: 11/03/2023] [Accepted: 11/04/2023] [Indexed: 11/16/2023]
Abstract
Rhamnolipids are biosurfactants produced by bacteria belonging to the Pseudomonas genus. They are discussed to complex heavy metal cations stronger than cations of Fe, Ca, Mg. It is therefore suggested to employ rhamnolipids in phytoextraction where their addition to soil should result in preferential complexation of heavy metals that can be taken up by plants, thus enabling rapid and ecological clean-up of contaminated soil. In order to test this concept, we evaluated the rhamnolipid-mediated phytoextraction of heavy metal from soil collected from the vicinity of a copper smelter. The following aspects were investigated: i) selectivity of rhamnolipids towards Cu, Zn, Pb, Cd and Fe during soil washing; ii) phytoextraction efficiency of each ion with respect to the effective concentration of rhamnolipids; iii) possible phytotoxic effects; iv) effect of micro-sized polystyrene amendment. The experiments evaluated soil washing efficiency, BCR (Community Bureau of Reference) sequential extraction to determine the impact of rhamnolipids on the mobility of metal ions, phytoextraction with maize (Zea mays L.) and phytotoxic effects based on dry matter, chlorophyll fluorescence and content. The obtained results indicated that rhamnolipids lack desired selectivity towards heavy metal ions as Fe was complexed more efficiently by 80 % of the available rhamnolipids compared to priority pollutants like Zn, Cu, Pb, which were complexed by only 20 % of the tested rhamnolipids. With increased concentration of rhamnolipids, the soil washing efficiency increased and shifted in favour of Fe, reaching values of approx. 469 mg for Fe and only 118 mg in total of all tested heavy metals. Phytoextraction also favoured the accumulation of Fe, while Cd was not removed from the soil even at the highest applied rhamnolipid concentrations. Considering the selectivity of rhamnolipids and the costs associated with their production, our results suggest the need to search for other alternative (bio)surfactants with better selectivity and lower price.
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Affiliation(s)
- Anna Parus
- Poznan University of Technology, Institute of Chemical Technology and Engineering, Berdychowo 4, 60 - 965 Poznan, Poland.
| | - Tomasz Ciesielski
- Poznan University of Technology, Institute of Chemical Technology and Engineering, Berdychowo 4, 60 - 965 Poznan, Poland
| | - Marta Woźniak-Karczewska
- Poznan University of Technology, Institute of Chemical Technology and Engineering, Berdychowo 4, 60 - 965 Poznan, Poland
| | - Łukasz Ławniczak
- Poznan University of Technology, Institute of Chemical Technology and Engineering, Berdychowo 4, 60 - 965 Poznan, Poland
| | - Michał Janeda
- Poznan University of Technology, Institute of Chemistry and Technical Electrochemistry, Berdychowo 4, 60 - 965 Poznan, Poland
| | - Mariusz Ślachciński
- Poznan University of Technology, Institute of Chemistry and Technical Electrochemistry, Berdychowo 4, 60 - 965 Poznan, Poland
| | - Dominika Radzikowska-Kujawska
- Poznan University of Life Sciences, Agronomy Department, Faculty of Agronomy and Bioengineering, Wojska Polskiego 48, 60-627 Poznan, Poland
| | - Mikołaj Owsianiak
- Quantitative Sustainability Assessment Division, Department of Environmental and Resources Engineering, Technical University of Denmark, Produktionstorvet 424, 2800 Kgs. Lyngby, Denmark
| | - Roman Marecik
- Poznan University of Life Sciences, Department of Biotechnology and Food Microbiology, Wojska Polskiego 48, 60-627 Poznan, Poland
| | - Andreas P Loibner
- Department IFA-Tulln, Institute of Environmental Biotechnology, BOKU - University of Natural Resources and Life Sciences, Vienna, Konrad-Lorenz-Straße 20, 3430 Tulln, Austria
| | - Hermann J Heipieper
- Department of Environmental Biotechnology, Helmholtz Centre for Environmental Research - UFZ, Permoserstraße 15, 04318 Leipzig, Germany
| | - Łukasz Chrzanowski
- Poznan University of Technology, Institute of Chemical Technology and Engineering, Berdychowo 4, 60 - 965 Poznan, Poland; Department IFA-Tulln, Institute of Environmental Biotechnology, BOKU - University of Natural Resources and Life Sciences, Vienna, Konrad-Lorenz-Straße 20, 3430 Tulln, Austria
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16
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Datta D, Ghosh S, Kumar S, Gangola S, Majumdar B, Saha R, Mazumdar SP, Singh SV, Kar G. Microbial biosurfactants: Multifarious applications in sustainable agriculture. Microbiol Res 2024; 279:127551. [PMID: 38016380 DOI: 10.1016/j.micres.2023.127551] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/18/2023] [Revised: 11/02/2023] [Accepted: 11/14/2023] [Indexed: 11/30/2023]
Abstract
Agriculture in the 21st century faces grave challenges to meet the unprecedented food demand of the burgeoning population as well as reduce the ecological footprint for achieving sustainable development goals. The extensive use of harsh synthetic surfactants in pesticides and the agrochemical industry has substantial adverse impacts on the soil and environment due to their toxic and non-biodegradable nature. Biosurfactants derived from plant, animal, and microbial sources can be an eco-friendly alternative to chemical surfactants. Microbes producing biosurfactants play a noteworthy role in biofilm formation, plant pathogen elimination, biodegradation, bioremediation, improving nutrient bioavailability, and can thrive well under stressful environments. Microbial biosurfactants are well suited for heavy metal and organic contaminants remediation in agricultural soil due to their low toxicity, high activity at fluctuating temperatures, biodegradability, and stability over a wide array of environmental conditions. This green technology will improve the agricultural soil quality by increasing the soil flushing efficiency, mobilization, and solubilization of nutrients by forming metal-biosurfactant complexes, and through the dissemination of complex nutrients. Such characteristics help it to play a pivotal role in environmental sustainability in the foreseeable future, which is required to increase the viability of biosurfactants for extensive commercial uses, making them accessible, affordable, and economically sustainable.
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Affiliation(s)
- Debarati Datta
- ICAR-Central Research Institute for Jute and Allied Fibres, Barrackpore, Kolkata 700 121, India
| | - Sourav Ghosh
- ICAR-Central Research Institute for Jute and Allied Fibres, Barrackpore, Kolkata 700 121, India.
| | - Saurabh Kumar
- ICAR-Research Complex for Eastern Region, Patna 800014, Bihar, India
| | - Saurabh Gangola
- Graphic Era Hill University, Bhimtal 263 156, Uttarakhand, India
| | - Bijan Majumdar
- ICAR-Central Research Institute for Jute and Allied Fibres, Barrackpore, Kolkata 700 121, India
| | - Ritesh Saha
- ICAR-Central Research Institute for Jute and Allied Fibres, Barrackpore, Kolkata 700 121, India
| | - Sonali Paul Mazumdar
- ICAR-Central Research Institute for Jute and Allied Fibres, Barrackpore, Kolkata 700 121, India
| | - Shiv Vendra Singh
- College of Agriculture, Rani Lakshmi Bai Central Agricultural University, Jhansi 238004, Uttar Pradesh, India
| | - Gouranga Kar
- ICAR-Central Research Institute for Jute and Allied Fibres, Barrackpore, Kolkata 700 121, India
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17
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Puyol McKenna P, Naughton PJ, Dooley JSG, Ternan NG, Lemoine P, Banat IM. Microbial Biosurfactants: Antimicrobial Activity and Potential Biomedical and Therapeutic Exploits. Pharmaceuticals (Basel) 2024; 17:138. [PMID: 38276011 PMCID: PMC10818721 DOI: 10.3390/ph17010138] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2023] [Revised: 01/14/2024] [Accepted: 01/18/2024] [Indexed: 01/27/2024] Open
Abstract
The rapid emergence of multidrug-resistant pathogens worldwide has raised concerns regarding the effectiveness of conventional antibiotics. This can be observed in ESKAPE pathogens, among others, whose multiple resistance mechanisms have led to a reduction in effective treatment options. Innovative strategies aimed at mitigating the incidence of antibiotic-resistant pathogens encompass the potential use of biosurfactants. These surface-active agents comprise a group of unique amphiphilic molecules of microbial origin that are capable of interacting with the lipidic components of microorganisms. Biosurfactant interactions with different surfaces can affect their hydrophobic properties and as a result, their ability to alter microorganisms' adhesion abilities and consequent biofilm formation. Unlike synthetic surfactants, biosurfactants present low toxicity and high biodegradability and remain stable under temperature and pH extremes, making them potentially suitable for targeted use in medical and pharmaceutical applications. This review discusses the development of biosurfactants in biomedical and therapeutic uses as antimicrobial and antibiofilm agents, in addition to considering the potential synergistic effect of biosurfactants in combination with antibiotics. Furthermore, the anti-cancer and anti-viral potential of biosurfactants in relation to COVID-19 is also discussed.
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Affiliation(s)
- Patricia Puyol McKenna
- The Nutrition Innovation Centre for Food and Health (NICHE), School of Biomedical Sciences, Faculty of Life and Health Sciences, Ulster University, Coleraine BT52 1 SA, UK; (P.P.M.); (P.J.N.); (J.S.G.D.); (N.G.T.)
| | - Patrick J. Naughton
- The Nutrition Innovation Centre for Food and Health (NICHE), School of Biomedical Sciences, Faculty of Life and Health Sciences, Ulster University, Coleraine BT52 1 SA, UK; (P.P.M.); (P.J.N.); (J.S.G.D.); (N.G.T.)
| | - James S. G. Dooley
- The Nutrition Innovation Centre for Food and Health (NICHE), School of Biomedical Sciences, Faculty of Life and Health Sciences, Ulster University, Coleraine BT52 1 SA, UK; (P.P.M.); (P.J.N.); (J.S.G.D.); (N.G.T.)
| | - Nigel G. Ternan
- The Nutrition Innovation Centre for Food and Health (NICHE), School of Biomedical Sciences, Faculty of Life and Health Sciences, Ulster University, Coleraine BT52 1 SA, UK; (P.P.M.); (P.J.N.); (J.S.G.D.); (N.G.T.)
| | - Patrick Lemoine
- Nanotechnology and Integrated Bioengineering Centre (NIBEC), School of Engineering, Ulster University, Belfast BT15 1ED, UK;
| | - Ibrahim M. Banat
- Pharmaceutical Science Research Group, Biomedical Sciences Research Institute, Ulster University, Coleraine BT52 1SA, UK
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18
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Rigolet A, Argüelles Arias A, Anckaert A, Quinton L, Rigali S, Tellatin D, Burguet P, Ongena M. Lipopeptides as rhizosphere public goods for microbial cooperation. Microbiol Spectr 2024; 12:e0310623. [PMID: 38047676 PMCID: PMC10783051 DOI: 10.1128/spectrum.03106-23] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/16/2023] [Accepted: 11/06/2023] [Indexed: 12/05/2023] Open
Abstract
IMPORTANCE Here, we provide new insights into the possible fate of cyclic lipopeptides as prominent specialized metabolites from beneficial bacilli and pseudomonads once released in the soil. Our data illustrate how the B. velezensis lipopeptidome may be enzymatically remodeled by Streptomyces as important members of the soil bacterial community. The enzymatic arsenal of S. venezuelae enables an unsuspected extensive degradation of these compounds, allowing the bacterium to feed on these exogenous products via a mechanism going beyond linearization, which was previously reported as a detoxification strategy. As soils are carbon-rich and nitrogen-poor environments, we propose a new role for cyclic lipopeptides in interspecies interactions, which is to fuel the nitrogen metabolism of a part of the rhizosphere microbial community. Streptomyces and other actinomycetes, producing numerous peptidases and displaying several traits of beneficial bacteria, should be at the front line to directly benefit from these metabolites as "public goods" for microbial cooperation.
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Affiliation(s)
- Augustin Rigolet
- Microbial Processes and Interactions laboratory, TERRA teaching and research centre, Gembloux Agro-Bio Tech,University of Liège, Gembloux, Belgium
| | - Anthony Argüelles Arias
- Microbial Processes and Interactions laboratory, TERRA teaching and research centre, Gembloux Agro-Bio Tech,University of Liège, Gembloux, Belgium
| | - Adrien Anckaert
- Microbial Processes and Interactions laboratory, TERRA teaching and research centre, Gembloux Agro-Bio Tech,University of Liège, Gembloux, Belgium
| | - Loïc Quinton
- Department of Chemistry, University of Liège, Liège, Belgium
| | - Sébastien Rigali
- InBioS—Centre for Protein Engineering,University of Liège, Liege, Belgium
- Hedera-22, Liege, Belgium
| | - Deborah Tellatin
- InBioS—Centre for Protein Engineering,University of Liège, Liege, Belgium
| | - Pierre Burguet
- Department of Chemistry, University of Liège, Liège, Belgium
| | - Marc Ongena
- Microbial Processes and Interactions laboratory, TERRA teaching and research centre, Gembloux Agro-Bio Tech,University of Liège, Gembloux, Belgium
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19
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Wycisk V, Wagner MC, Urner LH. Trends in the Diversification of the Detergentome. Chempluschem 2024; 89:e202300386. [PMID: 37668309 DOI: 10.1002/cplu.202300386] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/24/2023] [Revised: 09/04/2023] [Accepted: 09/05/2023] [Indexed: 09/06/2023]
Abstract
Detergents are amphiphilic molecules that serve as enabling steps for today's world applications. The increasing diversity of the detergentome is key to applications enabled by detergent science. Regardless of the application, the optimal design of detergents is determined empirically, which leads to failed preparations, and raising costs. To facilitate project planning, here we review synthesis strategies that drive the diversification of the detergentome. Synthesis strategies relevant for industrial and academic applications include linear, modular, combinatorial, bio-based, and metric-assisted detergent synthesis. Scopes and limitations of individual synthesis strategies in context with industrial product development and academic research are discussed. Furthermore, when designing detergents, the selection of molecular building blocks, i. e., head, linker, tail, is as important as the employed synthesis strategy. To facilitate the design of safe-to-use and tailor-made detergents, we provide an overview of established head, linker, and tail groups and highlight selected scopes and limitations for applications. It becomes apparent that most recent contributions to the increasing chemical diversity of detergent building blocks originate from the development of detergents for membrane protein studies. The overview of synthesis strategies and molecular blocks will bring us closer to the ability to predictably design and synthesize optimal detergents for challenging future applications.
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Affiliation(s)
- Virginia Wycisk
- TU Dortmund University, Department of Chemistry and Chemical Biology, Otto-Hahn-Str. 6, 44227, Dortmund, Germany
| | - Marc-Christian Wagner
- TU Dortmund University, Department of Chemistry and Chemical Biology, Otto-Hahn-Str. 6, 44227, Dortmund, Germany
| | - Leonhard H Urner
- TU Dortmund University, Department of Chemistry and Chemical Biology, Otto-Hahn-Str. 6, 44227, Dortmund, Germany
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20
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Noël N, Duchateau S, Messire G, Massicot F, Vasse JL, Villaume S, Aziz A, Dorey S, Crouzet J, Behr JB. Protecting-group free synthesis of glycoconjugates displaying dual fungicidal and plant defense-eliciting activities. Bioorg Chem 2023; 141:106829. [PMID: 37690319 DOI: 10.1016/j.bioorg.2023.106829] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/08/2023] [Revised: 08/24/2023] [Accepted: 08/30/2023] [Indexed: 09/12/2023]
Abstract
A straightforward synthesis of carbohydrate templated isoxazolidines is described, by reaction of unprotected glycosylhydroxylamines (operating as 1,3-dipoles) with methyl acrylate using microwave activation. Rhamno- and erythro-isoxazolidines are recognized by plant cells, resulting in a strong ROS-production as a plant immune response, and exert a high antifungal activity against Botrytis cinerea.
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Affiliation(s)
- Nathan Noël
- Université de Reims Champagne-Ardenne, Institut de Chimie Moléculaire de Reims, CNRS UMR 7312, 51687 Reims, France
| | - Simon Duchateau
- Université de Reims Champagne Ardenne, RIBP-USC INRAE 1488, 51100 Reims, France
| | - Gatien Messire
- Université de Reims Champagne-Ardenne, Institut de Chimie Moléculaire de Reims, CNRS UMR 7312, 51687 Reims, France
| | - Fabien Massicot
- Université de Reims Champagne-Ardenne, Institut de Chimie Moléculaire de Reims, CNRS UMR 7312, 51687 Reims, France
| | - Jean-Luc Vasse
- Université de Reims Champagne-Ardenne, Institut de Chimie Moléculaire de Reims, CNRS UMR 7312, 51687 Reims, France
| | - Sandra Villaume
- Université de Reims Champagne Ardenne, RIBP-USC INRAE 1488, 51100 Reims, France
| | - Aziz Aziz
- Université de Reims Champagne Ardenne, RIBP-USC INRAE 1488, 51100 Reims, France
| | - Stéphan Dorey
- Université de Reims Champagne Ardenne, RIBP-USC INRAE 1488, 51100 Reims, France
| | - Jérôme Crouzet
- Université de Reims Champagne Ardenne, RIBP-USC INRAE 1488, 51100 Reims, France.
| | - Jean-Bernard Behr
- Université de Reims Champagne-Ardenne, Institut de Chimie Moléculaire de Reims, CNRS UMR 7312, 51687 Reims, France.
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21
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Mohy Eldin A, Hossam N. Microbial surfactants: characteristics, production and broader application prospects in environment and industry. Prep Biochem Biotechnol 2023; 53:1013-1042. [PMID: 37651735 DOI: 10.1080/10826068.2023.2175364] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 09/02/2023]
Abstract
Microbial surfactants are green molecules with high surface activities having the most promising advantages over chemical surfactants including their ability to efficiently reducing surface and interfacial tension, nontoxic emulsion-based formulations, biocompatibility, biodegradability, simplicity of preparation from low cost materials such as residual by-products and renewable resources at large scales, effectiveness and stabilization under extreme conditions and broad spectrum antagonism of pathogens to be part of the biocontrol strategy. Thus, biosurfactants are universal tools of great current interest. The present work describes the major types and microbial origin of surfactants and their production optimization from agro-industrial wastes in the batch shake-flasks and bioreactor systems through solid-state and submerged fermentation industries. Various downstream strategies that had been developed to extract and purify biosurfactants are discussed. Further, the physicochemical properties and functional characteristics of biosurfactants open new future prospects for the development of efficient and eco-friendly commercially successful biotechnological product compounds with diverse potential applications in environment, industry, biomedicine, nanotechnology and energy-saving technology as well.
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Affiliation(s)
- Ahmed Mohy Eldin
- Department of Microbiology, Soils, Water and Environmental Research Institute (SWERI), Agricultural Research Center (ARC), Giza, Egypt
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22
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Wilsmann DE, Furian TQ, Carvalho D, Chitolina GZ, Lucca V, Emery BD, Borges KA, Martins AC, Pontin KP, Salle CTP, de Souza Moraes HL, do Nascimento VP. Antibiofilm activity of electrochemically activated water (ECAW) in the control of Salmonella Heidelberg biofilms on industrial surfaces. Braz J Microbiol 2023; 54:2035-2045. [PMID: 37184738 PMCID: PMC10485189 DOI: 10.1007/s42770-023-01005-2] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/23/2022] [Accepted: 05/04/2023] [Indexed: 05/16/2023] Open
Abstract
Owing to its antimicrobial activity, electrochemically activated water (ECAW) is a potential alternative to chemical disinfectants for eliminating foodborne pathogens, including Salmonella Heidelberg, from food processing facilities. However, their antibiofilm activity remains unclear. This study aimed to evaluate the antibiofilm activity of ECAW against S. Heidelberg biofilms formed on stainless steel and polyethylene and to determine its corrosive capacity. ECAW (200 ppm) and a broad-spectrum disinfectant (0.2%) were tested for their antibiofilm activity against S. Heidelberg at 25 °C and 37 °C after 10 and 20 min of contact with stainless steel and polyethylene. Potentiostatic polarization tests were performed to compare the corrosive capacity of both compounds. Both compounds were effective in removing S. Heidelberg biofilms. Bacterial counts were significantly lower with ECAW than with disinfectant in polyethylene, regardless the time of contact. The time of contact and the surface significantly influenced the bacterial counts of S. Heidelberg. Temperature was not an important factor affecting the antibiofilm activities of the compounds. ECAW was less corrosive than the disinfectant. ECAW demonstrated a similar or even superior effect in the control of S. Heidelberg biofilms, when compared to disinfectants, reducing bacterial counts by up to 5 log10 CFU cm-2. The corrosion of stainless steel with ECAW was similar to that of commercial disinfectants. This technology is a possible alternative for controlling S. Heidelberg in the food production chain.
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Affiliation(s)
- Daiane Elisa Wilsmann
- Centro de Diagnóstico e Pesquisa em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil.
| | - Thales Quedi Furian
- Centro de Diagnóstico e Pesquisa em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Daiane Carvalho
- Centro de Diagnóstico e Pesquisa em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Gabriela Zottis Chitolina
- Centro de Diagnóstico e Pesquisa em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Vivian Lucca
- Centro de Diagnóstico e Pesquisa em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Brunna Dias Emery
- Centro de Diagnóstico e Pesquisa em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Karen Apellanis Borges
- Centro de Diagnóstico e Pesquisa em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Abrahão Carvalho Martins
- Centro de Diagnóstico e Pesquisa em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Karine Patrin Pontin
- Centro de Diagnóstico e Pesquisa em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Carlos Tadeu Pippi Salle
- Centro de Diagnóstico e Pesquisa em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Hamilton Luiz de Souza Moraes
- Centro de Diagnóstico e Pesquisa em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Vladimir Pinheiro do Nascimento
- Centro de Diagnóstico e Pesquisa em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal do Rio Grande do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
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23
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Thaeder C, Stanek J, Couvreur J, Borrego C, Brunissen F, Allais F, Flourat AL, Cordelier S. Chemo-Enzymatic Synthesis and Biological Assessment of p-Coumarate Fatty Esters: New Antifungal Agents for Potential Plant Protection. Molecules 2023; 28:5803. [PMID: 37570772 PMCID: PMC10420902 DOI: 10.3390/molecules28155803] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Revised: 07/10/2023] [Accepted: 07/20/2023] [Indexed: 08/13/2023] Open
Abstract
One trend in agriculture is the replacement of classical pesticides with more ecofriendly solutions, such as elicitation, which is a promising approach consisting of stimulating the natural immune system of a plant to improve its resistance to pathogens. In this fashion, a library of p-coumaric-based compounds were synthesized in accordance with as many principles of green chemistry as possible. Then, these molecules were tested for (1) the direct inhibition of mycelium growth of two pathogens, Botrytis cinerea and Sclerotinia sclerotiorum, and (2) plasma membrane destabilization in Arabidopsis and rapeseed. Finally, the protective effect was evaluated on an Arabidopsis/B. cinerea pathosystem. Total inhibition of the growth of both fungi could be achieved, and significant ion leakage was observed using dihydroxylated fatty p-coumarate esters. A direct effect on plants was also recorded as a ca. three-fold reduction in the necrosis area.
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Affiliation(s)
- Cyrian Thaeder
- URD Agro-Biotechnologies Industrielles (ABI), Centre Européen de Biotechnologies et Bioéconomie (CEBB), AgroParisTech, 3 rue des Rouges Terres, 51110 Pomacle, France; (C.T.); (J.C.); (F.B.); (F.A.)
| | - Juliette Stanek
- UFR Sciences Exactes et Naturelles, Université de Reims Champagne Ardenne, RIBP EA 4707, USC INRAE 1488, 51100 Reims, France; (J.S.); (C.B.)
| | - Julien Couvreur
- URD Agro-Biotechnologies Industrielles (ABI), Centre Européen de Biotechnologies et Bioéconomie (CEBB), AgroParisTech, 3 rue des Rouges Terres, 51110 Pomacle, France; (C.T.); (J.C.); (F.B.); (F.A.)
| | - Célia Borrego
- UFR Sciences Exactes et Naturelles, Université de Reims Champagne Ardenne, RIBP EA 4707, USC INRAE 1488, 51100 Reims, France; (J.S.); (C.B.)
| | - Fanny Brunissen
- URD Agro-Biotechnologies Industrielles (ABI), Centre Européen de Biotechnologies et Bioéconomie (CEBB), AgroParisTech, 3 rue des Rouges Terres, 51110 Pomacle, France; (C.T.); (J.C.); (F.B.); (F.A.)
| | - Florent Allais
- URD Agro-Biotechnologies Industrielles (ABI), Centre Européen de Biotechnologies et Bioéconomie (CEBB), AgroParisTech, 3 rue des Rouges Terres, 51110 Pomacle, France; (C.T.); (J.C.); (F.B.); (F.A.)
| | - Amandine L. Flourat
- URD Agro-Biotechnologies Industrielles (ABI), Centre Européen de Biotechnologies et Bioéconomie (CEBB), AgroParisTech, 3 rue des Rouges Terres, 51110 Pomacle, France; (C.T.); (J.C.); (F.B.); (F.A.)
| | - Sylvain Cordelier
- UFR Sciences Exactes et Naturelles, Université de Reims Champagne Ardenne, RIBP EA 4707, USC INRAE 1488, 51100 Reims, France; (J.S.); (C.B.)
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24
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Mehmood N, Saeed M, Zafarullah S, Hyder S, Rizvi ZF, Gondal AS, Jamil N, Iqbal R, Ali B, Ercisli S, Kupe M. Multifaceted Impacts of Plant-Beneficial Pseudomonas spp. in Managing Various Plant Diseases and Crop Yield Improvement. ACS OMEGA 2023; 8:22296-22315. [PMID: 37396244 PMCID: PMC10308577 DOI: 10.1021/acsomega.3c00870] [Citation(s) in RCA: 15] [Impact Index Per Article: 15.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/10/2023] [Accepted: 05/18/2023] [Indexed: 07/04/2023]
Abstract
The modern agricultural system has issues with the reduction of agricultural productivity due to a wide range of abiotic and biotic stresses. It is also expected that in the future the entire world population may rapidly increase and will surely demand more food. Farmers now utilize a massive quantity of synthetic fertilizers and pesticides for disease management and to increase food production. These synthetic fertilizers badly affect the environment, the texture of the soil, plant productivity, and human health. However, agricultural safety and sustainability depend on an ecofriendly and inexpensive biological application. In contrast to synthetic fertilizers, soil inoculation with plant-growth-promoting rhizobacteria (PGPR) is one of the excellent alternative options. In this regard, we focused on the best PGPR genera, Pseudomonas, which exists in the rhizosphere as well as inside the plant's body and plays a role in sustainable agriculture. Many Pseudomonas spp. control plant pathogens and play an effective role in disease management through direct and indirect mechanisms. Pseudomonas spp. fix the amount of atmospheric nitrogen, solubilize phosphorus and potassium, and also produce phytohormones, lytic enzymes, volatile organic compounds, antibiotics, and secondary metabolites during stress conditions. These compounds stimulate plant growth by inducing systemic resistance and by inhibiting the growth of pathogens. Furthermore, pseudomonads also protect plants during different stress conditions like heavy metal pollution, osmosis, temperature, oxidative stress, etc. Now, several Pseudomonas-based commercial biological control products have been promoted and marketed, but there are a few limitations that hinder the development of this technology for extensive usage in agricultural systems. The variability among the members of Pseudomonas spp. draws attention to the huge research interest in this genus. There is a need to explore the potential of native Pseudomonas spp. as biocontrol agents and to use them in biopesticide development to support sustainable agriculture.
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Affiliation(s)
- Najaf Mehmood
- Department
of Botany, Government College Women University
Sialkot, Sialkot 51310, Pakistan
| | - Mahnoor Saeed
- Department
of Botany, Government College Women University
Sialkot, Sialkot 51310, Pakistan
| | - Sana Zafarullah
- Department
of Botany, Government College Women University
Sialkot, Sialkot 51310, Pakistan
| | - Sajjad Hyder
- Department
of Botany, Government College Women University
Sialkot, Sialkot 51310, Pakistan
| | - Zarrin Fatima Rizvi
- Department
of Botany, Government College Women University
Sialkot, Sialkot 51310, Pakistan
| | - Amjad Shahzad Gondal
- Department
of Plant Pathology, Bahauddin Zakariya University, Multan 60000, Pakistan
| | - Nuzhat Jamil
- Department
of Botany, University of the Punjab, Quaid-i-Azam Campus, Lahore 54590, Pakistan
| | - Rashid Iqbal
- Department
of Agronomy, Faculty of Agriculture and Environment, The Islamia University of Bahawalpur Pakistan, Bahawalpur 63100, Pakistan
| | - Baber Ali
- Department
of Plant Sciences, Quaid-i-Azam University, Islamabad 45320, Pakistan
| | - Sezai Ercisli
- Department
of Horticulture, Faculty of Agriculture, Ataturk University, Erzurum 25240, Türkiye
- HGF
Agro, Ata Teknokent, Erzurum TR-25240, Türkiye
| | - Muhammed Kupe
- Department
of Horticulture, Faculty of Agriculture, Ataturk University, Erzurum 25240, Türkiye
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25
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Al-Mutar DMK, Noman M, Abduljaleel Alzawar NS, Li D, Song F. Cyclic Lipopeptides of Bacillus amyloliquefaciens DHA6 Are the Determinants to Suppress Watermelon Fusarium Wilt by Direct Antifungal Activity and Host Defense Modulation. J Fungi (Basel) 2023; 9:687. [PMID: 37367623 DOI: 10.3390/jof9060687] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Revised: 06/15/2023] [Accepted: 06/17/2023] [Indexed: 06/28/2023] Open
Abstract
Fusarium wilt, caused by Fusarium oxysporum f. sp. niveum (Fon), poses a serious threat to watermelon productivity. We previously characterized six antagonistic bacterial strains, including DHA6, capable of suppressing watermelon Fusarium wilt under greenhouse conditions. This study investigates the role of extracellular cyclic lipopeptides (CLPs) produced by strain DHA6 in Fusarium wilt suppression. Taxonomic analysis based on the 16S rRNA gene sequence categorized strain DHA6 as Bacillus amyloliquefaciens. MALDI-TOF mass spectrometry identified five families of CLPs, i.e., iturin, surfactin, bacillomycin, syringfactin, and pumilacidin, in the culture filtrate of B. amyloliquefaciens DHA6. These CLPs exhibited significant antifungal activity against Fon by inducing oxidative stress and disrupting structural integrity, inhibiting mycelial growth and spore germination. Furthermore, pretreatment with CLPs promoted plant growth and suppressed watermelon Fusarium wilt by activating antioxidant enzymes (e.g., catalase, superoxide dismutase, and peroxidase) and triggering genes involved in salicylic acid and jasmonic acid/ethylene signaling in watermelon plants. These results highlight the critical roles of CLPs as determinants for B. amyloliquefaciens DHA6 in suppressing Fusarium wilt through direct antifungal activity and modulation of plant defense responses. This study provides a foundation for developing B. amyloliquefaciens DHA6-based biopesticides, serving as both antimicrobial agents and resistance inducers, to effectively control Fusarium wilt in watermelon and other crops.
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Affiliation(s)
- Dhabyan Mutar Kareem Al-Mutar
- Key Laboratory of Crop Diseases and Insect Pests of Ministry of Agriculture, Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China
- Key Laboratory of Biology of Crop Pathogens and Insects of Zhejiang Province, Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China
- Basra Agriculture Directorate, Almudaina 61008, Iraq
| | - Muhammad Noman
- Key Laboratory of Crop Diseases and Insect Pests of Ministry of Agriculture, Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China
- Key Laboratory of Biology of Crop Pathogens and Insects of Zhejiang Province, Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China
| | | | - Dayong Li
- Key Laboratory of Crop Diseases and Insect Pests of Ministry of Agriculture, Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China
- Key Laboratory of Biology of Crop Pathogens and Insects of Zhejiang Province, Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China
| | - Fengming Song
- Key Laboratory of Crop Diseases and Insect Pests of Ministry of Agriculture, Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China
- Key Laboratory of Biology of Crop Pathogens and Insects of Zhejiang Province, Institute of Biotechnology, Zhejiang University, Hangzhou 310058, China
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26
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Huang LR, Ling XN, Peng SY, Tan MH, Yan LQ, Liang YY, Li GH, Li KT. A marine lipopeptides-producing Bacillus amyloliquefaciens HY2-1 with a broad-spectrum antifungal and antibacterial activity and its fermentation kinetics study. World J Microbiol Biotechnol 2023; 39:196. [PMID: 37183209 DOI: 10.1007/s11274-023-03643-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/31/2022] [Accepted: 05/07/2023] [Indexed: 05/16/2023]
Abstract
The antagonistic Bacillus amyloliquefaciens HY2-1 was a marine microbiology that was isolated previously from the seabed silt of Beibu Gulf in China by dual culture with Penicillium digitatum. As a continuous study, the present work focused on evaluating the antimicrobial activity, identifying the produced active components, and revealing the fermentation characteristics of B. amyloliquefaciens HY2-1, respectively. It was found that B. amyloliquefaciens HY2-1 exhibited a broad-spectrum antimicrobial activity against the tested seven phytopathogenic fungi and five pathogenic bacteria by producing Bacillus lipopeptides such as fengycin A (C14 to C19 homologues) and surfactin (C14 and C15 homologues). Morphological observation of P. digitatum under light microscope, scanning electron microscopy, transmission electron microscopy, and fluorescence microscope inferred that B. amyloliquefaciens exerted the antagonistic activity by damaging the fungal cell membrane, thus inhibiting the mycelium growth and sporification of phytopathogenic fungi. As a marine microbiology, our results showed that B. amyloliquefaciens could survive and metabolize even at the culture condition with 110 g/L of NaCl concentration, and the produced antimicrobial compounds exhibited excellent thermostability and acid-alkali tolerance. The dynamic models were further constructed to theoretically analyze the fermentation process of B. amyloliquefaciens HY2-1, suggesting that the synthesis of antimicrobial compounds was coupled with both cell growth and cell biomass. In conclusion, the marine lipopeptides-producing B. amyloliquefaciens HY2-1 showed a promising prospect to be explored as a biocontrol agent for plant disease control of crops and postharvest preservation of fruits and vegetables, especially due to its outstanding stress resistance and the broad-spectrum and effective antagonist on various phytopathogenic fungi.
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Affiliation(s)
- Lin-Ru Huang
- College of Food Science and Technology, Guangdong Provincial Key Laboratory of Aquatic Product Processing and Safety, Guangdong Provincial Engineering Technology Research Center of Seafood, Guangdong Province Engineering Laboratory for Marine Biological Products, Key Laboratory of Advanced Processing of Aquatic Product of Guangdong Higher Education Institution, Guangdong Ocean University, Zhanjiang, 524088, China
- Collaborative Innovation Center of Seafood Deep Processing, Dalian Polytechnic University, Dalian, 116034, China
| | - Xiao-Ning Ling
- Jiangxi Engineering Laboratory for the Development and Utilization of Agricultural Microbial Resources, Institute of Applied Microbiology, Jiangxi Agricultural University, Nanchang, 330045, China
| | - Shuai-Ying Peng
- Jiangxi Engineering Laboratory for the Development and Utilization of Agricultural Microbial Resources, Institute of Applied Microbiology, Jiangxi Agricultural University, Nanchang, 330045, China.
| | - Ming-Hui Tan
- College of Food Science and Technology, Guangdong Provincial Key Laboratory of Aquatic Product Processing and Safety, Guangdong Provincial Engineering Technology Research Center of Seafood, Guangdong Province Engineering Laboratory for Marine Biological Products, Key Laboratory of Advanced Processing of Aquatic Product of Guangdong Higher Education Institution, Guangdong Ocean University, Zhanjiang, 524088, China
- Collaborative Innovation Center of Seafood Deep Processing, Dalian Polytechnic University, Dalian, 116034, China
| | - Lu-Qi Yan
- College of Food Science and Technology, Guangdong Provincial Key Laboratory of Aquatic Product Processing and Safety, Guangdong Provincial Engineering Technology Research Center of Seafood, Guangdong Province Engineering Laboratory for Marine Biological Products, Key Laboratory of Advanced Processing of Aquatic Product of Guangdong Higher Education Institution, Guangdong Ocean University, Zhanjiang, 524088, China
- Collaborative Innovation Center of Seafood Deep Processing, Dalian Polytechnic University, Dalian, 116034, China
| | - Ying-Yin Liang
- College of Food Science and Technology, Guangdong Provincial Key Laboratory of Aquatic Product Processing and Safety, Guangdong Provincial Engineering Technology Research Center of Seafood, Guangdong Province Engineering Laboratory for Marine Biological Products, Key Laboratory of Advanced Processing of Aquatic Product of Guangdong Higher Education Institution, Guangdong Ocean University, Zhanjiang, 524088, China
- Collaborative Innovation Center of Seafood Deep Processing, Dalian Polytechnic University, Dalian, 116034, China
| | - Gang-Hui Li
- College of Food Science and Technology, Guangdong Provincial Key Laboratory of Aquatic Product Processing and Safety, Guangdong Provincial Engineering Technology Research Center of Seafood, Guangdong Province Engineering Laboratory for Marine Biological Products, Key Laboratory of Advanced Processing of Aquatic Product of Guangdong Higher Education Institution, Guangdong Ocean University, Zhanjiang, 524088, China
- Collaborative Innovation Center of Seafood Deep Processing, Dalian Polytechnic University, Dalian, 116034, China
| | - Kun-Tai Li
- College of Food Science and Technology, Guangdong Provincial Key Laboratory of Aquatic Product Processing and Safety, Guangdong Provincial Engineering Technology Research Center of Seafood, Guangdong Province Engineering Laboratory for Marine Biological Products, Key Laboratory of Advanced Processing of Aquatic Product of Guangdong Higher Education Institution, Guangdong Ocean University, Zhanjiang, 524088, China.
- Jiangxi Engineering Laboratory for the Development and Utilization of Agricultural Microbial Resources, Institute of Applied Microbiology, Jiangxi Agricultural University, Nanchang, 330045, China.
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Steigenberger J, Verleysen Y, Geudens N, Madder A, Martins JC, Heerklotz H. Complex electrostatic effects on the selectivity of membrane-permeabilizing cyclic lipopeptides. Biophys J 2023; 122:950-963. [PMID: 35927958 PMCID: PMC10111218 DOI: 10.1016/j.bpj.2022.07.033] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/20/2022] [Revised: 05/04/2022] [Accepted: 07/28/2022] [Indexed: 11/28/2022] Open
Abstract
Cyclic lipopeptides (CLiPs) have many biological functions, including the selective permeabilization of target membranes, and technical and medical applications. We studied the anionic CLiP viscosin from Pseudomonas along with a neutral analog, pseudodesmin A, and the cationic viscosin-E2K to better understand electrostatic effects on target selectivity. Calcein leakage from liposomes of anionic phosphatidylglycerol (PG) and phosphatidylethanolamine (PE) is measured in comparison with net-neutral phosphatidylcholine by time-resolved fluorescence. By contrast to the typical selectivity of cationic peptides against anionic membranes, we find viscosin more active against PG/PE at 30 μM lipid than viscosin-E2K. At very low lipid concentration, the selectivity is reversed. An equi-activity analysis reveals the reciprocal partition coefficients, 1/K, and the CLiP-to-lipid mole ratio within the membrane as leakage after 1 h reaches 50%, Re50. As expected, 1/K to PG/PE is much lower (higher affinity) for viscosin-E2K (3 μM) than viscosin (15 μM). However, the local damage to the PG/PE membrane caused by a viscosin molecule is much stronger than that of viscosin-E2K. This can be explained by the strong membrane expansion due to PG/viscosin repulsion inducing asymmetry stress between the two leaflets and, ultimately, transient limited leakage at Re50 = 0.08. PG/viscosin-E2K attraction opposes expansion and leakage starts only as the PG charges in the outer leaflet are essentially compensated by the cationic peptide (Re50 = 0.32). In the high-lipid regime (at lipid concentrations cL ≫ 1/K), virtually all CLiP is membrane bound anyway and Re50 governs selectivity, favoring viscosin. In the low-lipid regime at cL ≪ 1/K, virtually all CLiP is in solution, 1/K becomes important and the "cation attacks anionic membrane" selectivity gets restored. Overall, activity and selectivity data can only properly be interpreted if the lipid regime is known and predictions for other lipid concentrations or cell counts require knowledge of 1/K and Re50.
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Affiliation(s)
- Jessica Steigenberger
- Department of Pharmaceutics, Institute of Pharmaceutical Sciences, University of Freiburg, Freiburg, Germany.
| | - Yentl Verleysen
- NMR and Structure Analysis Research Group, Department of Organic and Macromolecular Chemistry, Ghent University, Ghent, Belgium; Organic and Biomimetic Chemistry Research Group, Department of Organic and Macromolecular Chemistry, Ghent University, Ghent, Belgium
| | - Niels Geudens
- NMR and Structure Analysis Research Group, Department of Organic and Macromolecular Chemistry, Ghent University, Ghent, Belgium
| | - Annemieke Madder
- Organic and Biomimetic Chemistry Research Group, Department of Organic and Macromolecular Chemistry, Ghent University, Ghent, Belgium
| | - José C Martins
- NMR and Structure Analysis Research Group, Department of Organic and Macromolecular Chemistry, Ghent University, Ghent, Belgium
| | - Heiko Heerklotz
- Department of Pharmaceutics, Institute of Pharmaceutical Sciences, University of Freiburg, Freiburg, Germany; Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, Ontario, Canada; Signaling Research Centers BIOSS and CIBSS, University of Freiburg, Freiburg, Germany.
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28
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Parus A, Ciesielski T, Woźniak-Karczewska M, Ślachciński M, Owsianiak M, Ławniczak Ł, Loibner AP, Heipieper HJ, Chrzanowski Ł. Basic principles for biosurfactant-assisted (bio)remediation of soils contaminated by heavy metals and petroleum hydrocarbons - A critical evaluation of the performance of rhamnolipids. JOURNAL OF HAZARDOUS MATERIALS 2023; 443:130171. [PMID: 36367467 DOI: 10.1016/j.jhazmat.2022.130171] [Citation(s) in RCA: 9] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/10/2022] [Revised: 10/06/2022] [Accepted: 10/08/2022] [Indexed: 06/16/2023]
Abstract
Despite the fact that rhamnolipids are among the most studied biosurfactants, there are still several gaps which must be filled. The aim of this review is to emphasize and to indicate which issues should be taken into account in order to achieve efficient rhamnolipids-assisted biodegradation or phytoextraction of soils contaminated by heavy metals and petroleum hydrocarbons without harmful side effects. Four main topics have been elucidated in the review: effective concentration of rhamnolipids in soil, their potential phytotoxicity, susceptibility to biodegradation and interaction with soil microorganisms. The discussed elements are often closely associated and often overlap, thus making the interpretation of research results all the more challenging. Each dedicated section of this review includes a description of potential issues and questions, an explanation of the background and rationale for each problem, analysis of relevant literature reports and a short summary with possible application guidelines. The main conclusion is that there is a necessity to establish regulations regarding effective concentrations for rhamnolipids-assisted remediation of soil. The use of an improper concentration is the direct cause of all the other discussed phenomena.
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Affiliation(s)
- Anna Parus
- Poznan University of Technology, Institute of Chemical Technology and Engineering, Berdychowo 4, 60-965 Poznan, Poland
| | - Tomasz Ciesielski
- Poznan University of Technology, Institute of Chemical Technology and Engineering, Berdychowo 4, 60-965 Poznan, Poland
| | - Marta Woźniak-Karczewska
- Poznan University of Technology, Institute of Chemical Technology and Engineering, Berdychowo 4, 60-965 Poznan, Poland
| | - Mariusz Ślachciński
- Poznan University of Technology, Institute of Chemistry and Technical Electrochemistry, Berdychowo 4, 60-965 Poznan, Poland
| | - Mikołaj Owsianiak
- Quantitative Sustainability Assessment Division, Department of Environmental and Resources Engineering, Technical University of Denmark, Produktionstorvet 424, 2800 Kgs. Lyngby, Denmark
| | - Łukasz Ławniczak
- Poznan University of Technology, Institute of Chemical Technology and Engineering, Berdychowo 4, 60-965 Poznan, Poland
| | - Andreas P Loibner
- Department IFA-Tulln, Institute of Environmental Biotechnology, BOKU - University of Natural Resources and Life Sciences, Vienna, Konrad-Lorenz-Straße 20, 3430 Tulln, Austria
| | - Hermann J Heipieper
- Department of Environmental Biotechnology, Helmholtz Centre for Environmental Research - UFZ, Permoserstraße 15, 04318 Leipzig, Germany
| | - Łukasz Chrzanowski
- Poznan University of Technology, Institute of Chemical Technology and Engineering, Berdychowo 4, 60-965 Poznan, Poland; Department of Environmental Biotechnology, Helmholtz Centre for Environmental Research - UFZ, Permoserstraße 15, 04318 Leipzig, Germany.
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29
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Platel R, Lucau-Danila A, Baltenweck R, Maia-Grondard A, Trapet P, Magnin-Robert M, Randoux B, Duret M, Halama P, Hilbert JL, Coutte F, Jacques P, Hugueney P, Reignault P, Siah A. Deciphering immune responses primed by a bacterial lipopeptide in wheat towards Zymoseptoria tritici. FRONTIERS IN PLANT SCIENCE 2023; 13:1074447. [PMID: 36777540 PMCID: PMC9909289 DOI: 10.3389/fpls.2022.1074447] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 10/19/2022] [Accepted: 12/27/2022] [Indexed: 06/18/2023]
Abstract
Plant immunity induction with natural biocontrol compounds is a valuable and promising ecofriendly tool that fits with sustainable agriculture and healthy food. Despite the agroeconomic significance of wheat, the mechanisms underlying its induced defense responses remain obscure. We reveal here, using combined transcriptomic, metabolomic and cytologic approach, that the lipopeptide mycosubtilin from the beneficial bacterium Bacillus subtilis, protects wheat against Zymoseptoria tritici through a dual mode of action (direct and indirect) and that the indirect one relies mainly on the priming rather than on the elicitation of plant defense-related mechanisms. Indeed, the molecule primes the expression of 80 genes associated with sixteen functional groups during the early stages of infection, as well as the accumulation of several flavonoids during the period preceding the fungal switch to the necrotrophic phase. Moreover, genes involved in abscisic acid (ABA) biosynthesis and ABA-associated signaling pathways are regulated, suggesting a role of this phytohormone in the indirect activity of mycosubtilin. The priming-based bioactivity of mycosubtilin against a biotic stress could result from an interaction of the molecule with leaf cell plasma membranes that may mimic an abiotic stress stimulus in wheat leaves. This study provides new insights into induced immunity in wheat and opens new perspectives for the use of mycosubtilin as a biocontrol compound against Z. tritici.
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Affiliation(s)
- Rémi Platel
- Joint Research Unit 1158 BioEcoAgro, Junia, Université de Lille, Université de Liège, UPJV, Université d’Artois, ULCO, INRAE, Lille, France
| | - Anca Lucau-Danila
- Joint Research Unit 1158 BioEcoAgro, Junia, Université de Lille, Université de Liège, UPJV, Université d’Artois, ULCO, INRAE, Lille, France
| | | | | | - Pauline Trapet
- Joint Research Unit 1158 BioEcoAgro, Junia, Université de Lille, Université de Liège, UPJV, Université d’Artois, ULCO, INRAE, Lille, France
| | - Maryline Magnin-Robert
- Unité de Chimie Environnementale et Interactions sur le Vivant, Université du Littoral Côte d’Opale, Calais Cedex, France
| | - Béatrice Randoux
- Unité de Chimie Environnementale et Interactions sur le Vivant, Université du Littoral Côte d’Opale, Calais Cedex, France
| | - Morgane Duret
- Joint Research Unit 1158 BioEcoAgro, Junia, Université de Lille, Université de Liège, UPJV, Université d’Artois, ULCO, INRAE, Lille, France
| | - Patrice Halama
- Joint Research Unit 1158 BioEcoAgro, Junia, Université de Lille, Université de Liège, UPJV, Université d’Artois, ULCO, INRAE, Lille, France
| | - Jean-Louis Hilbert
- Joint Research Unit 1158 BioEcoAgro, Junia, Université de Lille, Université de Liège, UPJV, Université d’Artois, ULCO, INRAE, Lille, France
| | - François Coutte
- Joint Research Unit 1158 BioEcoAgro, Junia, Université de Lille, Université de Liège, UPJV, Université d’Artois, ULCO, INRAE, Lille, France
| | - Philippe Jacques
- Joint Research Unit 1158 BioEcoAgro, TERRA Teaching and Research Centre, MiPI, Gembloux Agro-Bio Tech, Université de Liège, Gembloux, Belgium
| | | | - Philippe Reignault
- Unité de Chimie Environnementale et Interactions sur le Vivant, Université du Littoral Côte d’Opale, Calais Cedex, France
| | - Ali Siah
- Joint Research Unit 1158 BioEcoAgro, Junia, Université de Lille, Université de Liège, UPJV, Université d’Artois, ULCO, INRAE, Lille, France
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Pierre E, Marcelo P, Croutte A, Dauvé M, Bouton S, Rippa S, Pageau K. Impact of Rhamnolipids (RLs), Natural Defense Elicitors, on Shoot and Root Proteomes of Brassica napus by a Tandem Mass Tags (TMTs) Labeling Approach. Int J Mol Sci 2023; 24:ijms24032390. [PMID: 36768708 PMCID: PMC9916879 DOI: 10.3390/ijms24032390] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2022] [Revised: 01/19/2023] [Accepted: 01/21/2023] [Indexed: 01/27/2023] Open
Abstract
The rapeseed crop is susceptible to many pathogens such as parasitic plants or fungi attacking aerial or root parts. Conventional plant protection products, used intensively in agriculture, have a negative impact on the environment as well as on human health. There is therefore a growing demand for the development of more planet-friendly alternative protection methods such as biocontrol compounds. Natural rhamnolipids (RLs) can be used as elicitors of plant defense mechanisms. These glycolipids, from bacteria secretome, are biodegradable, non-toxic and are known for their stimulating and protective effects, in particular on rapeseed against filamentous fungi. Characterizing the organ responsiveness to defense-stimulating compounds such as RLs is missing. This analysis is crucial in the frame of optimizing the effectiveness of RLs against various diseases. A Tandem Mass Tags (TMT) labeling of the proteins extracted from the shoots and roots of rapeseed has been performed and showed a differential pattern of protein abundance between them. Quantitative proteomic analysis highlighted the differential accumulation of parietal and cytoplasmic defense or stress proteins in response to RL treatments with a clear effect of the type of application (foliar spraying or root absorption). These results must be considered for further use of RLs to fight specific rapeseed pathogens.
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Affiliation(s)
- Elise Pierre
- Unité Transfrontalière BioEcoAgro, BIOlogie des Plantes et Innovation (BIOPI), UMRt 1158, Université de Picardie Jules Verne, 80039 Amiens, France
- Plateforme d’Ingénierie Cellulaire & Analyses des Protéines ICAP, FR CNRS 3085 ICP, Université de Picardie Jules Verne, 80039 Amiens, France
- Unité de Génie Enzymatique et Cellulaire, UMR CNRS 7025, Alliance Sorbonne Universités, Université de Technologie de Compiègne, 60203 Compiègne, France
| | - Paulo Marcelo
- Plateforme d’Ingénierie Cellulaire & Analyses des Protéines ICAP, FR CNRS 3085 ICP, Université de Picardie Jules Verne, 80039 Amiens, France
| | - Antoine Croutte
- Plateforme d’Ingénierie Cellulaire & Analyses des Protéines ICAP, FR CNRS 3085 ICP, Université de Picardie Jules Verne, 80039 Amiens, France
| | - Morgane Dauvé
- Unité de Génie Enzymatique et Cellulaire, UMR CNRS 7025, Alliance Sorbonne Universités, Université de Technologie de Compiègne, 60203 Compiègne, France
| | - Sophie Bouton
- Unité Transfrontalière BioEcoAgro, BIOlogie des Plantes et Innovation (BIOPI), UMRt 1158, Université de Picardie Jules Verne, 80039 Amiens, France
| | - Sonia Rippa
- Unité de Génie Enzymatique et Cellulaire, UMR CNRS 7025, Alliance Sorbonne Universités, Université de Technologie de Compiègne, 60203 Compiègne, France
- Correspondence: (S.R.); (K.P.)
| | - Karine Pageau
- Unité Transfrontalière BioEcoAgro, BIOlogie des Plantes et Innovation (BIOPI), UMRt 1158, Université de Picardie Jules Verne, 80039 Amiens, France
- Correspondence: (S.R.); (K.P.)
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Rodríguez-Moraga N, Ramos-Martín F, Buchoux S, Rippa S, D'Amelio N, Sarazin C. The effect of rhamnolipids on fungal membrane models as described by their interactions with phospholipids and sterols: An in silico study. Front Chem 2023; 11:1124129. [PMID: 36895318 PMCID: PMC9989204 DOI: 10.3389/fchem.2023.1124129] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/14/2022] [Accepted: 02/06/2023] [Indexed: 02/23/2023] Open
Abstract
Introduction: Rhamnolipids (RLs) are secondary metabolites naturally produced by bacteria of the genera Pseudomonas and Burkholderia with biosurfactant properties. A specific interest raised from their potential as biocontrol agents for crop culture protection in regard to direct antifungal and elicitor activities. As for other amphiphilic compounds, a direct interaction with membrane lipids has been suggested as the key feature for the perception and subsequent activity of RLs. Methods: Molecular Dynamics (MD) simulations are used in this work to provide an atomistic description of their interactions with different membranous lipids and focusing on their antifungal properties. Results and discussion: Our results suggest the insertion of RLs into the modelled bilayers just below the plane drawn by lipid phosphate groups, a placement that is effective in promoting significant membrane fluidification of the hydrophobic core. This localization is promoted by the formation of ionic bonds between the carboxylate group of RLs and the amino group of the phosphatidylethanolamine (PE) or phosphatidylserine (PS) headgroups. Moreover, RL acyl chains adhere to the ergosterol structure, forming a significantly higher number of van der Waals contact with respect to what is observed for phospholipid acyl chains. All these interactions might be essential for the membranotropic-driven biological actions of RLs.
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Affiliation(s)
- Nely Rodríguez-Moraga
- Unité de Génie Enzymatique et Cellulaire UMR 7025 CNRS, Université de Picardie Jules Verne, Amiens, France
| | - Francisco Ramos-Martín
- Unité de Génie Enzymatique et Cellulaire UMR 7025 CNRS, Université de Picardie Jules Verne, Amiens, France
| | - Sébastien Buchoux
- Unité de Génie Enzymatique et Cellulaire UMR 7025 CNRS, Université de Picardie Jules Verne, Amiens, France
| | - Sonia Rippa
- Unité de Génie Enzymatique et Cellulaire, CNRS UMR 7025, Sorbonne Universités, Université de Technologie de Compiègne, Compiègne, France
| | - Nicola D'Amelio
- Unité de Génie Enzymatique et Cellulaire UMR 7025 CNRS, Université de Picardie Jules Verne, Amiens, France
| | - Catherine Sarazin
- Unité de Génie Enzymatique et Cellulaire UMR 7025 CNRS, Université de Picardie Jules Verne, Amiens, France
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Steigenberger J, Mergen C, De Roo V, Geudens N, Martins JC, Heerklotz H. The effect of membrane thickness on the membrane permeabilizing activity of the cyclic lipopeptide tolaasin II. Front Mol Biosci 2022; 9:1064742. [PMID: 36619163 PMCID: PMC9817028 DOI: 10.3389/fmolb.2022.1064742] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/08/2022] [Accepted: 11/21/2022] [Indexed: 12/25/2022] Open
Abstract
Tolaasin II is an amphiphilic, membrane-active, cyclic lipopeptide produced by Pseudomonas tolaasii and is responsible for brown blotch disease in mushroom. To better understand the mode of action and membrane selectivity of tolaasin II and related lipopeptides, its permeabilizing effect on liposomes of different membrane thickness was characterized. An equi-activity analysis served to distinguish between the effects of membrane partitioning and the intrinsic activity of the membrane-bound peptide. It was found that thicker membranes require higher local peptide concentrations to become leaky. More specifically, the mole ratio of membrane-bound peptide per lipid needed to induce 50% leakage of calcein within 1 h, Re 50, increased monotonically with membrane thickness from 0.0016 for the 14:1 to 0.0070 for the 20:1 lipid-chains. Moreover, fast but limited leakage kinetics in the low-lipid regime were observed implying a mode of action based on membrane asymmetry stress in this time and concentration window. While the assembly of the peptide to oligomeric pores of defined length along the bilayer z-axis can in principle explain inhibition by increasing membrane thickness, it cannot account for the observed limited leakage. Therefore, reduced intrinsic membrane-permeabilizing activity with increasing membrane thickness is attributed here to the increased mechanical strength and order of thicker membranes.
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Affiliation(s)
- Jessica Steigenberger
- Department of Pharmaceutics, Institute of Pharmaceutical Sciences, University of Freiburg, Freiburg, Germany,*Correspondence: Jessica Steigenberger, ; Heiko Heerklotz,
| | - Catherine Mergen
- Department of Pharmaceutics, Institute of Pharmaceutical Sciences, University of Freiburg, Freiburg, Germany
| | - Vic De Roo
- NMR and Structure Analysis Research Group, Department of Organic and Macromolecular Chemistry, Ghent University, Ghent, Belgium
| | - Niels Geudens
- NMR and Structure Analysis Research Group, Department of Organic and Macromolecular Chemistry, Ghent University, Ghent, Belgium
| | - José C. Martins
- NMR and Structure Analysis Research Group, Department of Organic and Macromolecular Chemistry, Ghent University, Ghent, Belgium
| | - Heiko Heerklotz
- Department of Pharmaceutics, Institute of Pharmaceutical Sciences, University of Freiburg, Freiburg, Germany,Leslie Dan Faculty of Pharmacy, University of Toronto, Toronto, ON, Canada,Signaling Research Centers BIOSS and CIBSS, University of Freiburg, Freiburg, Germany,*Correspondence: Jessica Steigenberger, ; Heiko Heerklotz,
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Karamchandani BM, Pawar AA, Pawar SS, Syed S, Mone NS, Dalvi SG, Rahman PKSM, Banat IM, Satpute SK. Biosurfactants' multifarious functional potential for sustainable agricultural practices. Front Bioeng Biotechnol 2022; 10:1047279. [PMID: 36578512 PMCID: PMC9792099 DOI: 10.3389/fbioe.2022.1047279] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2022] [Accepted: 11/21/2022] [Indexed: 12/14/2022] Open
Abstract
Increasing food demand by the ever-growing population imposes an extra burden on the agricultural and food industries. Chemical-based pesticides, fungicides, fertilizers, and high-breeding crop varieties are typically employed to enhance crop productivity. Overexploitation of chemicals and their persistence in the environment, however, has detrimental effects on soil, water, and air which consequently disturb the food chain and the ecosystem. The lower aqueous solubility and higher hydrophobicity of agrochemicals, pesticides, metals, and hydrocarbons allow them to adhere to soil particles and, therefore, continue in the environment. Chemical pesticides, viz., organophosphate, organochlorine, and carbamate, are used regularly to protect agriculture produce. Hydrophobic pollutants strongly adhered to soil particles can be solubilized or desorbed through the usage of biosurfactant/s (BSs) or BS-producing and pesticide-degrading microorganisms. Among different types of BSs, rhamnolipids (RL), surfactin, mannosylerythritol lipids (MELs), and sophorolipids (SL) have been explored extensively due to their broad-spectrum antimicrobial activities against several phytopathogens. Different isoforms of lipopeptide, viz., iturin, fengycin, and surfactin, have also been reported against phytopathogens. The key role of BSs in designing and developing biopesticide formulations is to protect crops and our environment. Various functional properties such as wetting, spreading, penetration ability, and retention period are improved in surfactant-based formulations. This review emphasizes the use of diverse types of BSs and their source microorganisms to challenge phytopathogens. Extensive efforts seem to be focused on discovering the innovative antimicrobial potential of BSs to combat phytopathogens. We discussed the effectiveness of BSs in solubilizing pesticides to reduce their toxicity and contamination effects in the soil environment. Thus, we have shed some light on the use of BSs as an alternative to chemical pesticides and other agrochemicals as sparse literature discusses their interactions with pesticides. Life cycle assessment (LCA) and life cycle sustainability analysis (LCSA) quantifying their impact on human activities/interventions are also included. Nanoencapsulation of pesticide formulations is an innovative approach in minimizing pesticide doses and ultimately reducing their direct exposures to humans and animals. Some of the established big players and new entrants in the global BS market are providing promising solutions for agricultural practices. In conclusion, a better understanding of the role of BSs in pesticide solubilization and/or degradation by microorganisms represents a valuable approach to reducing their negative impact and maintaining sustainable agricultural practices.
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Affiliation(s)
| | - Ameya A. Pawar
- Department of Microbiology, Savitribai Phule Pune University, Pune, Maharashtra, India
| | - Sujit S. Pawar
- Department of Microbiology, Savitribai Phule Pune University, Pune, Maharashtra, India
| | - Sahil Syed
- Department of Microbiology, Savitribai Phule Pune University, Pune, Maharashtra, India
| | - Nishigandha S. Mone
- Department of Microbiology, Savitribai Phule Pune University, Pune, Maharashtra, India
| | - Sunil G. Dalvi
- Tissue Culture Section, Vasantdada Sugar Institute, Pune, India
| | - Pattanathu K. S. M. Rahman
- Discovery, School of Pharmacy and Biomolecular Sciences, Liverpool John Moores University, Liverpool, United Kingdom
| | - Ibrahim M. Banat
- School of Biomedical Sciences, Faculty of Life and Health Sciences, University of Ulster, Coleraine, United Kingdom,*Correspondence: Surekha K. Satpute, ; Ibrahim M. Banat,
| | - Surekha K. Satpute
- Department of Microbiology, Savitribai Phule Pune University, Pune, Maharashtra, India,*Correspondence: Surekha K. Satpute, ; Ibrahim M. Banat,
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Mgbechidinma CL, Akan OD, Zhang C, Huang M, Linus N, Zhu H, Wakil SM. Integration of green economy concepts for sustainable biosurfactant production - A review. BIORESOURCE TECHNOLOGY 2022; 364:128021. [PMID: 36167175 DOI: 10.1016/j.biortech.2022.128021] [Citation(s) in RCA: 12] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/09/2022] [Revised: 09/18/2022] [Accepted: 09/21/2022] [Indexed: 06/16/2023]
Abstract
The link between increasing global population, food demand, industrialization, and agricultural waste is strong. Decomposing by-products from food cycles can introduce harmful toxic heavy metals, active degrading microbes, and enzymes to the environment. Additionally, high greenhouse gas emissions from the decomposing wastes contribute to global change and a high carbon economy. The bioeconomy and circular economy of biosurfactant production utilize these cheap feedstocks and promote waste to valuable product initiatives. Waste reduction, reuse, and recycling in an integrating green economy bioprocess ensure the sustainability of novel, cost-effective, safe, and renewable health-grade biosurfactants. This work reviews green economy concepts integration with sustainable biosurfactant production and its application in health-related industries. Benefits from recent advances in the production, characterization, and health-wise classification of biosurfactants were further discussed, including its limitations, techno-economic assessment, market evaluations, possible roadblocks, and future directions.
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Affiliation(s)
- Chiamaka Linda Mgbechidinma
- Integrated Life Sciences, University of Georgia, Athens, GA 30602, USA; Ocean College, Zhejiang University, Zhoushan 316021, Zhejiang, China; Department of Microbiology, University of Ibadan, Ibadan, Oyo State 200243, Nigeria
| | - Otobong Donald Akan
- College of Food Science and Engineering, Central South University of Forestry and Technology, Hunan 41004, China; Microbiology Department, Akwa-Ibom State University, Akwa-Ibom State, Nigeria
| | - Chunfang Zhang
- Ocean College, Zhejiang University, Zhoushan 316021, Zhejiang, China
| | - Mengzhen Huang
- College of Food Science and Engineering, Central South University of Forestry and Technology, Hunan 41004, China
| | - Nsemeke Linus
- Biochemistry Department, University of Uyo, Uyo, Nigeria
| | - He Zhu
- College of Food Science and Engineering, Central South University of Forestry and Technology, Hunan 41004, China; College of Food Science and Engineering, Shandong Agriculture and Engineering University, Shandong, China
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35
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Zhao F, Wang B, Yuan M, Ren S. Comparative study on antimicrobial activity of mono-rhamnolipid and di-rhamnolipid and exploration of cost-effective antimicrobial agents for agricultural applications. Microb Cell Fact 2022; 21:221. [PMID: 36274139 PMCID: PMC9590131 DOI: 10.1186/s12934-022-01950-x] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/11/2022] [Accepted: 10/13/2022] [Indexed: 11/28/2022] Open
Abstract
Background Chemical pesticides have defects in crop diseases control, such as narrow antimicrobial spectrum, chemicals residue risk and harm to farmland ecosystem. Antimicrobial agents from microbial sources are highly interested in agriculture. Studies showed that rhamnolipid biosurfactants possessed certain antimicrobial activity. The structural differences in rhamnolipid inevitably affect their activities. But the antimicrobial effect of mono-rhamnolipid and di-rhamnolipid is unknown. Rhamnolipid with unique structure can be produced using specific microbial cell factory. Results Different types of rhamnolipid were produced from different Pseudomonas aeruginosa strains. Rha-C10-C10 and Rha-Rha-C10-C10 were the main homologues in the separated mono-rhamnolipid and di-rhamnolipid, respectively. Both mono-rhamnolipid and di-rhamnolipid exhibited certain antimicrobial activity against the tested microbial strains, especially the fungi and Gram-positive bacteria. But mono-rhamnolipid was superior to di-rhamnolipid, with inhibition zone diameters larger than 25 mm and inhibition rate higher than 90%. The IC50 values of mono-rhamnolipid were lower than 5 mg/L against the tested bacterium and fungus, whereas the IC50 values of di-rhamnolipid were ranged from 10 mg/L to 20 mg/L. Mono-rhamnolipid stimulated the tested strains to generate higher level of intracellular ROS. Mono-rhamnolipid exhibited better antimicrobial activity to the potential agricultural pathogens, such as Alternaria alternata, Pantoea agglomerans and Cladosporium sp. The mono-rhamnolipid crude extract of strain P. aeruginosa SGΔrhlC can replace the separated mono-rhamnolipid. After 50 times dilution, the fermentation broth of the mono-rhamnolipid producing strain SGΔrhlC exhibited equal antimicrobial effect to mono-rhamnolipid (200 mg/L). Prospects of mono-rhamnolipid were also discussed for antimicrobial applications in agriculture. Conclusions This work discovered that mono-rhamnolipid was superior to di-rhamnolipid on antimicrobial activity for agricultural applications. Mono-rhamnolipid is an excellent candidate for agricultural biocontrol. The knockout strain P. aeruginosa SGΔrhlC is an excellent microbial cell factory for high producing mono-rhamnolipid. Its mono-rhamnolipid crude extract and its diluted fermentation broth are cost-effective antimicrobial agents. This work provided new insights to develop green and efficient antimicrobial agents for agricultural applications.
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Raouani NEH, Claverie E, Randoux B, Chaveriat L, Yaseen Y, Yada B, Martin P, Cabrera JC, Jacques P, Reignault P, Magnin-Robert M, Lounès-Hadj Sahraoui A. Bio-Inspired Rhamnolipids, Cyclic Lipopeptides and a Chito-Oligosaccharide Confer Protection against Wheat Powdery Mildew and Inhibit Conidia Germination. Molecules 2022; 27:molecules27196672. [PMID: 36235207 PMCID: PMC9571057 DOI: 10.3390/molecules27196672] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Revised: 09/26/2022] [Accepted: 09/27/2022] [Indexed: 11/06/2022] Open
Abstract
Plant protection is mainly based on the application of synthetic pesticides to limit yield losses resulting from diseases. However, the use of more eco-friendly strategies for sustainable plant protection has become a necessity that could contribute to controlling pathogens through a direct antimicrobial effect and/or an induction of plant resistance. Three different families of natural or bioinspired compounds originated from bacterial or fungal strains have been evaluated to protect wheat against powdery mildew, caused by the biotrophic Blumeria graminis f.sp. tritici (Bgt). Thus, three bio-inspired mono-rhamnolipids (smRLs), three cyclic lipopeptides (CLPs, mycosubtilin (M), fengycin (F), surfactin (S)) applied individually and in mixtures (M + F and M + F + S), as well as a chitosan oligosaccharide (COS) BioA187 were tested against Bgt, in planta and in vitro. Only the three smRLs (Rh-Eth-C12, Rh-Est-C12 and Rh-Succ-C12), the two CLP mixtures and the BioA187 led to a partial protection of wheat against Bgt. The higher inhibitor effects on the germination of Bgt spores in vitro were observed from smRLs Rh-Eth-C12 and Rh-Succ-C12, mycosubtilin and the two CLP mixtures. Taking together, these results revealed that such molecules could constitute promising tools for a more eco-friendly agriculture.
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Affiliation(s)
- Nour El Houda Raouani
- Unité de Chimie Environnementale et Interactions sur le Vivant (EA 4492), Université Littoral Côte d’Opale, CEDEX CS 80699, 62228 Calais, France
| | - Elodie Claverie
- Materia Nova ASBL, Avenue du Champ de Mars 6, 7000 Mons, Belgium
| | - Béatrice Randoux
- Unité de Chimie Environnementale et Interactions sur le Vivant (EA 4492), Université Littoral Côte d’Opale, CEDEX CS 80699, 62228 Calais, France
| | - Ludovic Chaveriat
- ULR 7519—Unité Transformations & Agroressources, Université d’Artois, UnilaSalle, CEDEX CS 20819, 62408 Béthune, France
| | - Yazen Yaseen
- Lipofabrik, Parc d’Activités du Mélantois, 917 Rue des Saules, 59810 Lesquin, France
| | - Bopha Yada
- Materia Nova ASBL, Avenue du Champ de Mars 6, 7000 Mons, Belgium
| | - Patrick Martin
- ULR 7519—Unité Transformations & Agroressources, Université d’Artois, UnilaSalle, CEDEX CS 20819, 62408 Béthune, France
| | | | - Philippe Jacques
- JUNIA, Joint Research Unit UMRt 1158-INRAE, BioEcoAgro, Équipe Métabolites Spécialisés d’Origine Végétale, University Lille, INRAE, University Liège, UPJV, University Artois, ULCO, 48, Boulevard Vauban, CEDEX BP 41290, 59014 Lille, France
- Joint Research Unit 1158 BioEcoAgro, Équipe Métabolites Spécialisés d’Origine Végétale, Microbial Processes and Interactions, TERRA Research Centre, Gembloux Agro-Bio Tech, Université de Liège, 5030 Gembloux, Belgium
| | - Philippe Reignault
- Unité de Chimie Environnementale et Interactions sur le Vivant (EA 4492), Université Littoral Côte d’Opale, CEDEX CS 80699, 62228 Calais, France
| | - Maryline Magnin-Robert
- Unité de Chimie Environnementale et Interactions sur le Vivant (EA 4492), Université Littoral Côte d’Opale, CEDEX CS 80699, 62228 Calais, France
- Correspondence: (M.M.-R.); (A.L.-H.S.)
| | - Anissa Lounès-Hadj Sahraoui
- Unité de Chimie Environnementale et Interactions sur le Vivant (EA 4492), Université Littoral Côte d’Opale, CEDEX CS 80699, 62228 Calais, France
- Correspondence: (M.M.-R.); (A.L.-H.S.)
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Botcazon C, Bergia T, Lecouturier D, Dupuis C, Rochex A, Acket S, Nicot P, Leclère V, Sarazin C, Rippa S. Rhamnolipids and fengycins, very promising amphiphilic antifungal compounds from bacteria secretomes, act on Sclerotiniaceae fungi through different mechanisms. Front Microbiol 2022; 13:977633. [PMID: 36246282 PMCID: PMC9557291 DOI: 10.3389/fmicb.2022.977633] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/24/2022] [Accepted: 09/12/2022] [Indexed: 11/13/2022] Open
Abstract
Rhamnolipids (RLs) and fengycins (FGs) are amphiphilic lipid compounds from bacteria secretomes proposed to replace synthetic pesticides for crop protection. They both display plant defense triggering properties and direct antimicrobial activities. In particular, they have well reported antifungal effects against phytopathogenic fungi. RLs and FGs are considered to act through a direct interaction with membrane lipids and a destabilization of microorganism plasma membrane, thereby limiting the risk of resistance emergence. The main objective of this work was to gain insights in the antimycelial mode of action of these metabolites to promote them as environment and human health friendly biocontrol solutions. Their biocidal effects were studied on two Sclerotiniaceae fungi responsible for diseases in numerous plant species worldwide. We show here that different strains of Botrytis cinerea and Sclerotinia sclerotiorum have opposite sensitivities to RLs and FGs on plate experiments. Overall, B. cinerea is more sensitive to FGs while S. sclerotiorum is more sensitive to RLs. Electron microscopy observations demonstrated that RLs induce mycelial destructuring by asperities emergence and hyphal fusions whereas FGs promote swelling and formation of vesicle-like structures due to vacuole fusions and autophagy. Permeability studies, phosphatidylserine externalization and reactive oxygen species production assessments showed a programmed cell death triggering by RLs at medium concentrations (until 50 μg mL−1) and necrosis characteristics at higher concentration. Programmed cell death was always observed on hyphae treated with FGs. Quantifications of mycelial ergosterol content indicated that a higher ergosterol rate in S. sclerotiorum correlates with increasing sensitivity to RLs. Oppositely, a lower ergosterol rate in B. cinerea correlates with increasing sensitivity to FGs, which was confirmed by ergosterol biosynthesis inhibition with tebuconazole. This gain of knowledge will help to better understand the mode of action of RLs and FGs to fight specific plant fungal diseases.
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Affiliation(s)
- Camille Botcazon
- Unité de Génie Enzymatique et Cellulaire, CNRS UMR 7025, Sorbonne Universités, Université de Technologie de Compiègne, Compiègne, France
| | - Thomas Bergia
- Unité de Génie Enzymatique et Cellulaire, CNRS UMR 7025, Sorbonne Universités, Université de Technologie de Compiègne, Compiègne, France
| | - Didier Lecouturier
- Charles Viollette Institute, UMRt BioEcoAgro 1158-INRAe, Métabolites Secondaires d’Origine Microbienne, Université de Lille, Université de Liège, Lille, France
| | - Chloé Dupuis
- Charles Viollette Institute, UMRt BioEcoAgro 1158-INRAe, Métabolites Secondaires d’Origine Microbienne, Université de Lille, Université de Liège, Lille, France
| | - Alice Rochex
- Charles Viollette Institute, UMRt BioEcoAgro 1158-INRAe, Métabolites Secondaires d’Origine Microbienne, Université de Lille, Université de Liège, Lille, France
| | - Sébastien Acket
- Unité de Génie Enzymatique et Cellulaire, CNRS UMR 7025, Sorbonne Universités, Université de Technologie de Compiègne, Compiègne, France
| | - Philippe Nicot
- Centre de Recherche PACA, Domaine Saint Maurice, Unité de Pathologie Végétale, INRAe, Avignon, France
| | - Valérie Leclère
- Charles Viollette Institute, UMRt BioEcoAgro 1158-INRAe, Métabolites Secondaires d’Origine Microbienne, Université de Lille, Université de Liège, Lille, France
| | - Catherine Sarazin
- Unité de Génie Enzymatique et Cellulaire, CNRS UMR 7025, Université de Picardie Jules Verne, Amiens, France
| | - Sonia Rippa
- Unité de Génie Enzymatique et Cellulaire, CNRS UMR 7025, Sorbonne Universités, Université de Technologie de Compiègne, Compiègne, France
- *Correspondence: Sonia Rippa,
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Karamchandani BM, Maurya PA, Dalvi SG, Waghmode S, Sharma D, Rahman PKSM, Ghormade V, Satpute SK. Synergistic Activity of Rhamnolipid Biosurfactant and Nanoparticles Synthesized Using Fungal Origin Chitosan Against Phytopathogens. Front Bioeng Biotechnol 2022; 10:917105. [PMID: 36017342 PMCID: PMC9396382 DOI: 10.3389/fbioe.2022.917105] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/10/2022] [Accepted: 05/24/2022] [Indexed: 11/13/2022] Open
Abstract
Phytopathogens pose severe implications in the quantity and quality of food production by instigating several diseases. Biocontrol strategies comprising the application of biomaterials have offered endless opportunities for sustainable agriculture. We explored multifarious potentials of rhamnolipid-BS (RH-BS: commercial), fungal chitosan (FCH), and FCH-derived nanoparticles (FCHNPs). The high-quality FCH was extracted from Cunninghamella echinulata NCIM 691 followed by the synthesis of FCHNPs. Both, FCH and FCHNPs were characterized by UV-visible spectroscopy, DLS, zeta potential, FTIR, SEM, and Nanoparticle Tracking Analysis (NTA). The commercial chitosan (CH) and synthesized chitosan nanoparticles (CHNPs) were used along with test compounds (FCH and FCHNPs). SEM analysis revealed the spherical shape of the nanomaterials (CHNPs and FCHNPs). NTA provided high-resolution visual validation of particle size distribution for CHNPs (256.33 ± 18.80 nm) and FCHNPs (144.33 ± 10.20 nm). The antibacterial and antifungal assays conducted for RH-BS, FCH, and FCHNPs were supportive to propose their efficacies against phytopathogens. The lower MIC of RH-BS (256 μg/ml) was observed than that of FCH and FCHNPs (>1,024 μg/ml) against Xanthomonas campestris NCIM 5028, whereas a combination study of RH-BS with FCHNPs showed a reduction in MIC up to 128 and 4 μg/ml, respectively, indicating their synergistic activity. The other combination of RH-BS with FCH resulted in an additive effect reducing MIC up to 128 and 256 μg/ml, respectively. Microdilution plate assay conducted for three test compounds demonstrated inhibition of fungi, FI: Fusarium moniliforme ITCC 191, FII: Fusarium moniliforme ITCC 4432, and FIII: Fusarium graminearum ITCC 5334 (at 0.015% and 0.020% concentration). Furthermore, potency of test compounds performed through the in vitro model (poisoned food technique) displayed dose-dependent (0.005%, 0.010%, 0.015%, and 0.020% w/v) antifungal activity. Moreover, RH-BS and FCHNPs inhibited spore germination (61–90%) of the same fungi. Our efforts toward utilizing the combination of RH-BS with FCHNPs are significant to develop eco-friendly, low cytotoxic formulations in future.
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Affiliation(s)
| | - Priya A. Maurya
- Department of Microbiology, Savitribai Phule Pune University, Pune, India
| | - Sunil G. Dalvi
- Tissue Culture Section, Vasantdada Sugar Institute, Pune, India
- *Correspondence: Sunil G. Dalvi, ; Surekha K. Satpute,
| | | | - Deepansh Sharma
- Amity Institute of Microbial Technology, Amity University Rajasthan, Jaipur, India
| | - Pattanathu K. S. M. Rahman
- TeeGene and TARA Biologics, Life Science Accelerator, Liverpool School of Tropical Medicine, Liverpool, United Kingdom
- Centre for Natural Products Discovery, School of Pharmacy and Biomolecular Sciences, Liverpool John Moores University, Liverpool, United Kingdom
| | | | - Surekha K. Satpute
- Department of Microbiology, Savitribai Phule Pune University, Pune, India
- *Correspondence: Sunil G. Dalvi, ; Surekha K. Satpute,
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Platel R, Lucau-Danila A, Baltenweck R, Maia-Grondard A, Chaveriat L, Magnin-Robert M, Randoux B, Trapet P, Halama P, Martin P, Hilbert JL, Höfte M, Hugueney P, Reignault P, Siah A. Bioinspired Rhamnolipid Protects Wheat Against Zymoseptoria tritici Through Mainly Direct Antifungal Activity and Without Major Impact on Leaf Physiology. FRONTIERS IN PLANT SCIENCE 2022; 13:878272. [PMID: 35720601 PMCID: PMC9204090 DOI: 10.3389/fpls.2022.878272] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/17/2022] [Accepted: 04/25/2022] [Indexed: 06/15/2023]
Abstract
Rhamnolipids (RLs), glycolipids biosynthesized by the Pseudomonas and Burkholderia genera, are known to display various activities against a wide range of pathogens. Most previous studies on RLs focused on their direct antimicrobial activity, while only a few reports described the mechanisms by which RLs induce resistance against phytopathogens and the related fitness cost on plant physiology. Here, we combined transcriptomic and metabolomic approaches to unravel the mechanisms underlying RL-induced resistance in wheat against the hemibiotrophic fungus Zymoseptoria tritici, a major pathogen of this crop. Investigations were carried out by treating wheat plants with a bioinspired synthetic mono-RL with a 12-carbon fatty acid tail, dodecanoyl α/β-L-rhamnopyranoside (Rh-Est-C12), under both infectious and non-infectious conditions to examine its potential wheat defense-eliciting and priming bioactivities. Whereas, Rh-Est-C12 conferred to wheat a significant protection against Z. tritici (41% disease severity reduction), only a slight effect of this RL on wheat leaf gene expression and metabolite accumulation was observed. A subset of 24 differentially expressed genes (DEGs) and 11 differentially accumulated metabolites (DAMs) was scored in elicitation modalities 2, 5, and 15 days post-treatment (dpt), and 25 DEGs and 17 DAMs were recorded in priming modalities 5 and 15 dpt. Most changes were down-regulations, and only a few DEGs and DAMs associated with resistance to pathogens were identified. Nevertheless, a transient early regulation in gene expression was highlighted at 2 dpt (e.g., genes involved in signaling, transcription, translation, cell-wall structure, and function), suggesting a perception of the RL by the plant upon treatment. Further in vitro and in planta bioassays showed that Rh-Est-C12 displays a significant direct antimicrobial activity toward Z. tritici. Taken together, our results suggest that Rh-Est-C12 confers protection to wheat against Z. tritici through direct antifungal activity and, to a lesser extent, by induction of plant defenses without causing major alterations in plant metabolism. This study provides new insights into the modes of action of RLs on the wheat-Z. tritici pathosystem and highlights the potential interest in Rh-Est-C12, a low-fitness cost molecule, to control this pathogen.
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Affiliation(s)
- Rémi Platel
- Joint Research Unit 1158 BioEcoAgro, Junia, Univ. Lille, Univ. Liège, UPJV, Univ. Artois, ULCO, INRAE, Lille, France
| | - Anca Lucau-Danila
- Joint Research Unit 1158 BioEcoAgro, Junia, Univ. Lille, Univ. Liège, UPJV, Univ. Artois, ULCO, INRAE, Lille, France
| | | | | | - Ludovic Chaveriat
- Univ. Artois, UniLasalle, ULR 7519–Unité Transformations and Agroressources, Béthune, France
| | - Maryline Magnin-Robert
- Unité de Chimie Environnementale et Interactions sur le Vivant (EA 4492), Université du Littoral Côte d'Opale, Calais, France
| | - Béatrice Randoux
- Unité de Chimie Environnementale et Interactions sur le Vivant (EA 4492), Université du Littoral Côte d'Opale, Calais, France
| | - Pauline Trapet
- Joint Research Unit 1158 BioEcoAgro, Junia, Univ. Lille, Univ. Liège, UPJV, Univ. Artois, ULCO, INRAE, Lille, France
| | - Patrice Halama
- Joint Research Unit 1158 BioEcoAgro, Junia, Univ. Lille, Univ. Liège, UPJV, Univ. Artois, ULCO, INRAE, Lille, France
| | - Patrick Martin
- Univ. Artois, UniLasalle, ULR 7519–Unité Transformations and Agroressources, Béthune, France
| | - Jean-Louis Hilbert
- Joint Research Unit 1158 BioEcoAgro, Junia, Univ. Lille, Univ. Liège, UPJV, Univ. Artois, ULCO, INRAE, Lille, France
| | - Monica Höfte
- Laboratory of Phytopathology, Department of Plants and Crops, Ghent University, Ghent, Belgium
| | | | - Philippe Reignault
- Unité de Chimie Environnementale et Interactions sur le Vivant (EA 4492), Université du Littoral Côte d'Opale, Calais, France
| | - Ali Siah
- Joint Research Unit 1158 BioEcoAgro, Junia, Univ. Lille, Univ. Liège, UPJV, Univ. Artois, ULCO, INRAE, Lille, France
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Nassar HN, Rabie AM, Abu Amr SS, El-Gendy NS. Kinetic and statistical perspectives on the interactive effects of recalcitrant polyaromatic and sulfur heterocyclic compounds and in-vitro nanobioremediation of oily marine sediment at microcosm level. ENVIRONMENTAL RESEARCH 2022; 209:112768. [PMID: 35085558 DOI: 10.1016/j.envres.2022.112768] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/04/2021] [Revised: 01/10/2022] [Accepted: 01/17/2022] [Indexed: 06/14/2023]
Abstract
A halotolerant biosurfactant producer Pseudomonas aeruginosa strain NSH3 (NCBI Gene Bank Accession No. MN149622) was isolated to degrade high concentrations of recalcitrant polyaromatic hydrocarbons (PAHs) and polyaromatic heterocyclic sulfur compounds (PASHs). In biphasic batch bioreactors, the biodegradation and biosurfactant-production activities of NSH3 have been significantly enhanced (p < 0.0001) by its decoration with eco-friendly prepared magnetite nanoparticles (MNPs). On an artificially contaminated sediment microcosm level, regression modeling and statistical analysis based on a 23 full factorial design of experiments were trendily applied to provide insights into the interactive impacts of such pollutants. MNPs-coated NSH3 were also innovatively applied for nanobioremediation (NBR) of in-vitro diesel oil-polluted sediment microcosms. Gravimetric, chromatographic, and microbial respiratory analyses proved the significantly enhanced biodegradation capabilities of MNPs-coated NSH3 (p < 0.001) and the complete mineralization of various recalcitrant diesel oil components. Kinetic analyses showed that the biodegradation of iso- and n-alkanes was best fitted with a second-order kinetic model equation. Nevertheless, PAHs and PASHs in biphasic batch bioreactors and sediment microcosms followed the first-order kinetic model equation. Sustainable NBR overcome the toxicity of low molecular weight hydrocarbons, mass transfer limitation, and steric hindrance of hydrophobic recalcitrant high molecular weight hydrocarbons and alkylated polyaromatic compounds.
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Affiliation(s)
- Hussein N Nassar
- Egyptian Petroleum Research Institute (EPRI), Nasr City, Cairo, PO, 11727, Egypt; Center of Excellence, October University for Modern Sciences and Arts (MSA), 6(th) of October City, Giza, PO, 12566, Egypt
| | - Abdelrahman M Rabie
- Egyptian Petroleum Research Institute (EPRI), Nasr City, Cairo, PO, 11727, Egypt
| | - Salem S Abu Amr
- Department of Chemical and Environmental Engineering, Faculty of Engineering, Karabuk University, Demir Campus, Karabuk, PO, 78050, Turkey
| | - Nour Sh El-Gendy
- Egyptian Petroleum Research Institute (EPRI), Nasr City, Cairo, PO, 11727, Egypt; Center of Excellence, October University for Modern Sciences and Arts (MSA), 6(th) of October City, Giza, PO, 12566, Egypt.
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Carvalho D, Menezes R, Chitolina GZ, Kunert-Filho HC, Wilsmann DE, Borges KA, Furian TQ, Salle CTP, Moraes HLDS, do Nascimento VP. Antibiofilm activity of the biosurfactant and organic acids against foodborne pathogens at different temperatures, times of contact, and concentrations. Braz J Microbiol 2022; 53:1051-1064. [PMID: 35260995 PMCID: PMC9151985 DOI: 10.1007/s42770-022-00714-4] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/11/2021] [Accepted: 02/13/2022] [Indexed: 02/01/2023] Open
Abstract
Biofilm formation has been suggested to play a significant role in the survival of pathogens in food production. Interest in evaluating alternative products of natural origin for disinfectant use has increased. However, there is a lack of information regarding the effects of biosurfactants and organic acids on Salmonella enterica serotype Enteritidis, Escherichia coli, and Campylobacter jejuni biofilms, mainly considering temperatures found in environments of poultry processing, as well as simulating the contact times used for disinfection. The aim of this study was to evaluate the antibiofilm activity of rhamnolipid, malic acid, and citric acid on the adhesion of S. Enteritidis, E. coli, and C. jejuni on polystyrene surfaces at different temperatures (4, 12, and 25 °C), compound concentrations, and times of contact (5 and 10 min), and to analyze the potential use of these compounds to disrupt formed biofilms. All three compounds exhibited antibiofilm activity under all analyzed conditions, both in the prevention and removal of formed biofilms. Contact time was less important than temperature and concentration. The antibiofilm activity of the compounds also varied according to the pathogens involved. In the food industry, compound selection must consider the temperature found in each stage of product processing and the target pathogens to be controlled.
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Affiliation(s)
- Daiane Carvalho
- Centro de Diagnóstico E Pesquisa Em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal Do Rio Grande Do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Rafaela Menezes
- Centro de Diagnóstico E Pesquisa Em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal Do Rio Grande Do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Gabriela Zottis Chitolina
- Centro de Diagnóstico E Pesquisa Em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal Do Rio Grande Do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Hiran Castagnino Kunert-Filho
- Centro de Diagnóstico E Pesquisa Em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal Do Rio Grande Do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Daiane Elisa Wilsmann
- Centro de Diagnóstico E Pesquisa Em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal Do Rio Grande Do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Karen Apellanis Borges
- Centro de Diagnóstico E Pesquisa Em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal Do Rio Grande Do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil.
| | - Thales Quedi Furian
- Centro de Diagnóstico E Pesquisa Em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal Do Rio Grande Do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Carlos Tadeu Pippi Salle
- Centro de Diagnóstico E Pesquisa Em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal Do Rio Grande Do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Hamilton Luiz de Souza Moraes
- Centro de Diagnóstico E Pesquisa Em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal Do Rio Grande Do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
| | - Vladimir Pinheiro do Nascimento
- Centro de Diagnóstico E Pesquisa Em Patologia Aviária, Departamento de Medicina Animal, Faculdade de Veterinária, Universidade Federal Do Rio Grande Do Sul, Av. Bento Gonçalves 9090, Porto Alegre, RS, CEP 91540-000, Brazil
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Patowary R, Patowary K, Kalita MC, Deka S, Borah JM, Joshi SJ, Zhang M, Peng W, Sharma G, Rinklebe J, Sarma H. Biodegradation of hazardous naphthalene and cleaner production of rhamnolipids - Green approaches of pollution mitigation. ENVIRONMENTAL RESEARCH 2022; 209:112875. [PMID: 35122743 DOI: 10.1016/j.envres.2022.112875] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/16/2021] [Revised: 01/23/2022] [Accepted: 01/30/2022] [Indexed: 06/14/2023]
Abstract
Toxic and hazardous waste poses a serious threat to human health and the environment. Green remediation technologies are required to manage such waste materials, which is a demanding and difficult task. Here, effort was made to explore the role of Pseudomonas aeruginosa SR17 in alleviating naphthalene via catabolism and simultaneously producing biosurfactant. The results showed up to 89.2% naphthalene degradation at 35 °C and pH 7. The GC/MS analysis revealed the generation of naphthalene degradation intermediates. Biosurfactant production led to the reduction of surface tension of the culture medium to 34.5 mN/m. The biosurfactant was further characterized as rhamnolipids. LC-MS of the column purified biosurfactant revealed the presence of both mono and di rhamnolipid congeners. Rhamnolipid find tremendous application in medical field and as well as in detergent industry and since they are of biological origin, they can be used as favorable alternative against their chemical counterparts. The study demonstrated that catabolism of naphthalene and concurrent formation of rhamnolipid can result in a dual activity process, namely environmental cleanup and production of a valuable microbial metabolite. Additionally, the present-day application of rhamnolipids is highlighted.
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Affiliation(s)
- Rupshikha Patowary
- Environmental Biotechnology Laboratory, Life Sciences Division, Institute of Advanced Study in Science & Technology (IASST), Paschim Boragaon, Guwahati, 781 035, Assam, India
| | - Kaustuvmani Patowary
- Environmental Biotechnology Laboratory, Life Sciences Division, Institute of Advanced Study in Science & Technology (IASST), Paschim Boragaon, Guwahati, 781 035, Assam, India
| | - Mohan Chandra Kalita
- Department of Biotechnology, Gauhati University, Guwahati, 781 014, Assam, India
| | - Suresh Deka
- Faculty of Sciences, Assam Down Town University, Guwahati, Assam, 781026, India
| | - Jayanta Madhab Borah
- Department of Chemistry, Nandanath Saikia College, Titabar, 785630, Assam, India
| | - Sanket J Joshi
- Oil & Gas Research Center, Central Analytical and Applied Research Unit, Sultan Qaboos University, Oman
| | - Ming Zhang
- Department of Environmental Engineering, China Jiliang University, No. 258 Xueyuan Street, Hangzhou, 310018, Zhejiang, China
| | - Wanxi Peng
- School of Forestry, Henan Agricultural University, Zhengzhou, 450002, China
| | - Gaurav Sharma
- International Research Centre of Nanotechnology for Himalayan Sustainability (IRCNHS), Shoolini University, Solan 173212, Himachal Pradesh, India; College of Materials Science and Engineering, Shenzhen Key Laboratory of Polymer Science and Technology, Guangdong Research Center for Interfacial Engineering of Functional Materials, Nanshan District Key Lab. for Biopolymers and Safety Evaluation, Shenzhen University, Shenzhen, 518060, PR China; School of Science and Technology, Shoolini University, Saharanpur, India
| | - Jörg Rinklebe
- School of Forestry, Henan Agricultural University, Zhengzhou, 450002, China; International Research Centre of Nanotechnology for Himalayan Sustainability (IRCNHS), Shoolini University, Solan 173212, Himachal Pradesh, India; Laboratory of Soil- and Groundwater-Management, Institute of Soil Engineering, Waste and Water Science, Faculty of Architecture and Civil Engineering, University of Wuppertal, Pauluskirchstraße 7, 42285, Wuppertal, Germany; Department of Environment, Energy and Geoinformatics, Sejong University, 98 Gunja-Dong, Guangjin-Gu, Seoul, Republic of Korea
| | - Hemen Sarma
- Bioremediation Technology Research Group, Department of Botany, Bodoland University, Rangalikhata, Deborgaon, Kokrajhar (BTR), Assam, 783370, India.
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Cordelier S, Crouzet J, Gilliard G, Dorey S, Deleu M, Dhondt-Cordelier S. Deciphering the role of plant plasma membrane lipids in response to invasion patterns: how could biology and biophysics help? JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:2765-2784. [PMID: 35560208 DOI: 10.1093/jxb/erab517] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/23/2021] [Accepted: 11/25/2021] [Indexed: 06/15/2023]
Abstract
Plants have to constantly face pathogen attacks. To cope with diseases, they have to detect the invading pathogen as early as possible via the sensing of conserved motifs called invasion patterns. The first step of perception occurs at the plasma membrane. While many invasion patterns are perceived by specific proteinaceous immune receptors, several studies have highlighted the influence of the lipid composition and dynamics of the plasma membrane in the sensing of invasion patterns. In this review, we summarize current knowledge on how some microbial invasion patterns could interact with the lipids of the plasma membrane, leading to a plant immune response. Depending on the invasion pattern, different mechanisms are involved. This review outlines the potential of combining biological with biophysical approaches to decipher how plasma membrane lipids are involved in the perception of microbial invasion patterns.
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Affiliation(s)
- Sylvain Cordelier
- Université de Reims Champagne Ardenne, RIBP EA 4707, USC INRAE 1488, SFR Condorcet FR CNRS 3417, 51100 Reims, France
| | - Jérôme Crouzet
- Université de Reims Champagne Ardenne, RIBP EA 4707, USC INRAE 1488, SFR Condorcet FR CNRS 3417, 51100 Reims, France
| | - Guillaume Gilliard
- Laboratoire de Biophysique Moléculaire aux Interfaces, SFR Condorcet FR CNRS 3417, TERRA Research Center, Gembloux Agro-Bio Tech, Université de Liège, 2 Passage des Déportés, B-5030 Gembloux, Belgium
| | - Stéphan Dorey
- Université de Reims Champagne Ardenne, RIBP EA 4707, USC INRAE 1488, SFR Condorcet FR CNRS 3417, 51100 Reims, France
| | - Magali Deleu
- Laboratoire de Biophysique Moléculaire aux Interfaces, SFR Condorcet FR CNRS 3417, TERRA Research Center, Gembloux Agro-Bio Tech, Université de Liège, 2 Passage des Déportés, B-5030 Gembloux, Belgium
| | - Sandrine Dhondt-Cordelier
- Université de Reims Champagne Ardenne, RIBP EA 4707, USC INRAE 1488, SFR Condorcet FR CNRS 3417, 51100 Reims, France
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Carbohydrate-carbohydrate interaction drives the preferential insertion of dirhamnolipid into glycosphingolipid enriched membranes. J Colloid Interface Sci 2022; 616:739-748. [PMID: 35247812 DOI: 10.1016/j.jcis.2022.02.120] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2021] [Revised: 02/04/2022] [Accepted: 02/24/2022] [Indexed: 11/22/2022]
Abstract
Rhamnolipids (RLs) are among the most important biosurfactants produced by microorganisms, and have been widely investigated because of their multiple biological activities. Their action appears to depend on their structural interference with lipid membranes, therefore several studies have been performed to investigate this aspect. We studied by X-ray scattering, neutron reflectometry and molecular dynamic simulations the insertion of dirhamnolipid (diRL), the most abundant RL, in model cellular membranes made of phospholipids and glycosphingolipids. In our model systems the affinity of diRL to the membrane is highly promoted by the presence of the glycosphingolipids and molecular dynamics simulations unveil that this evidence is related to sugar-sugar attractive interactions at the membrane surface. Our results improve the understanding of the plethora of activities associated with RLs, also opening new perspectives in their selective use for pharmaceutical and cosmetics formulations. Additionally, they shed light on the still debated role of carbohydrate-carbohydrate interactions as driving force for molecular contacts at membrane surface.
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Yang B, Yang S, Zheng W, Wang Y. Plant immunity inducers: from discovery to agricultural application. STRESS BIOLOGY 2022; 2:5. [PMID: 37676359 PMCID: PMC10442025 DOI: 10.1007/s44154-021-00028-9] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/11/2021] [Accepted: 12/13/2021] [Indexed: 09/08/2023]
Abstract
While conventional chemical fungicides directly eliminate pathogens, plant immunity inducers activate or prime plant immunity. In recent years, considerable progress has been made in understanding the mechanisms of immune regulation in plants. The development and application of plant immunity inducers based on the principles of plant immunity represent a new field in plant protection research. In this review, we describe the mechanisms of plant immunity inducers in terms of plant immune system activation, summarize the various classes of reported plant immunity inducers (proteins, oligosaccharides, chemicals, and lipids), and review methods for the identification or synthesis of plant immunity inducers. The current situation, new strategies, and future prospects in the development and application of plant immunity inducers are also discussed.
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Affiliation(s)
- Bo Yang
- Department of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China
- The Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing, 210095, China
| | - Sen Yang
- Department of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China
- The Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing, 210095, China
| | - Wenyue Zheng
- Department of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China
- The Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing, 210095, China
| | - Yuanchao Wang
- Department of Plant Pathology, Nanjing Agricultural University, Nanjing, 210095, China.
- The Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing, 210095, China.
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Oni FE, Esmaeel Q, Onyeka JT, Adeleke R, Jacquard C, Clement C, Gross H, Ait Barka E, Höfte M. Pseudomonas Lipopeptide-Mediated Biocontrol: Chemotaxonomy and Biological Activity. Molecules 2022; 27:372. [PMID: 35056688 PMCID: PMC8777863 DOI: 10.3390/molecules27020372] [Citation(s) in RCA: 16] [Impact Index Per Article: 8.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/01/2021] [Revised: 12/29/2021] [Accepted: 01/05/2022] [Indexed: 12/14/2022] Open
Abstract
Pseudomonas lipopeptides (Ps-LPs) play crucial roles in bacterial physiology, host-microbe interactions and plant disease control. Beneficial LP producers have mainly been isolated from the rhizosphere, phyllosphere and from bulk soils. Despite their wide geographic distribution and host range, emerging evidence suggests that LP-producing pseudomonads and their corresponding molecules display tight specificity and follow a phylogenetic distribution. About a decade ago, biocontrol LPs were mainly reported from the P. fluorescens group, but this has drastically advanced due to increased LP diversity research. On the one hand, the presence of a close-knit relationship between Pseudomonas taxonomy and the molecule produced may provide a startup toolbox for the delineation of unknown LPs into existing (or novel) LP groups. Furthermore, a taxonomy-molecule match may facilitate decisions regarding antimicrobial activity profiling and subsequent agricultural relevance of such LPs. In this review, we highlight and discuss the production of beneficial Ps-LPs by strains situated within unique taxonomic groups and the lineage-specificity and coevolution of this relationship. We also chronicle the antimicrobial activity demonstrated by these biomolecules in limited plant systems compared with multiple in vitro assays. Our review further stresses the need to systematically elucidate the roles of diverse Ps-LP groups in direct plant-pathogen interactions and in the enhancement of plant innate immunity.
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Affiliation(s)
- Feyisara Eyiwumi Oni
- Université de Reims Champagne Ardenne, Unité de Recherche RIBP EA4707 USC INRAE 1488, SFR Condorcet FR CNRS 3417, 51100 Reims, France; (Q.E.); (C.J.); (C.C.); (E.A.B.)
- Department of Biological Sciences, Faculty of Science, Anchor University, Ayobo P.M.B 00001, Lagos State, Nigeria
- Unit for Environmental Sciences and Management, Faculty of Natural and Agricultural Sciences, North-West University, Potchefstroom 2520, South Africa;
| | - Qassim Esmaeel
- Université de Reims Champagne Ardenne, Unité de Recherche RIBP EA4707 USC INRAE 1488, SFR Condorcet FR CNRS 3417, 51100 Reims, France; (Q.E.); (C.J.); (C.C.); (E.A.B.)
| | - Joseph Tobias Onyeka
- Plant Pathology Unit, National Root Crops Research Institute (NRCRI), Umudike 440001, Abia State, Nigeria;
| | - Rasheed Adeleke
- Unit for Environmental Sciences and Management, Faculty of Natural and Agricultural Sciences, North-West University, Potchefstroom 2520, South Africa;
| | - Cedric Jacquard
- Université de Reims Champagne Ardenne, Unité de Recherche RIBP EA4707 USC INRAE 1488, SFR Condorcet FR CNRS 3417, 51100 Reims, France; (Q.E.); (C.J.); (C.C.); (E.A.B.)
| | - Christophe Clement
- Université de Reims Champagne Ardenne, Unité de Recherche RIBP EA4707 USC INRAE 1488, SFR Condorcet FR CNRS 3417, 51100 Reims, France; (Q.E.); (C.J.); (C.C.); (E.A.B.)
| | - Harald Gross
- Department of Pharmaceutical Biology, Institute of Pharmaceutical Sciences, University of Tubingen, Auf der Morgenstelle 8, 72076 Tübingen, Germany;
| | - Essaid Ait Barka
- Université de Reims Champagne Ardenne, Unité de Recherche RIBP EA4707 USC INRAE 1488, SFR Condorcet FR CNRS 3417, 51100 Reims, France; (Q.E.); (C.J.); (C.C.); (E.A.B.)
| | - Monica Höfte
- Laboratory of Phytopathology, Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Coupure Links 653, B-9000 Ghent, Belgium;
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Control of Multidrug-Resistant Pathogenic Staphylococci Associated with Vaginal Infection Using Biosurfactants Derived from Potential Probiotic Bacillus Strain. FERMENTATION 2022. [DOI: 10.3390/fermentation8010019] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/20/2022] Open
Abstract
Biosurfactants exhibit antioxidant, antibacterial, antifungal, and antiviral activities. They can be used as therapeutic agents and in the fight against infectious diseases. Moreover, the anti-adhesive properties against several pathogens point to the possibility that they might serve as an anti-adhesive coating agent for medical inserts and prevent nosocomial infections, without using synthetic substances. In this study, the antimicrobial, antibiofilm, cell surface hydrophobicity, and antioxidative activities of biosurfactant extracted from Bacillus sp., against four pathogenic strains of Staphylococcus spp. associated with vaginal infection, were studied. Our results have shown that the tested biosurfactant possesses a promising antioxidant potential, and an antibacterial potency against multidrug clinical isolates of Staphylococcus, with an inhibitory diameter ranging between 27 and 37 mm, and a bacterial growth inhibition at an MIC of 1 mg/ mL, obtained. The BioSa3 was highly effective on the biofilm formation of different tested pathogenic strains. Following their treatment by BioSa3, a significant decrease in bacterial attachment (p < 0.05) was justified by the reduction in the optical (from 0.709 to 0.111) following their treatment by BioSa3. The antibiofilm effect can be attributed to its ability to alter the membrane physiology of the tested pathogens to cause a significant decrease (p < 0.05) of over 50% of the surface hydrophobicity. Based on the obtained result of the bioactivities in the current study, BioSa3 is a good candidate in new therapeutics to better control multidrug-resistant bacteria and overcome bacterial biofilm-associated infections by protecting surfaces from microbial contamination.
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Nadarajah K, Abdul Rahman NSN. Plant-Microbe Interaction: Aboveground to Belowground, from the Good to the Bad. Int J Mol Sci 2021; 22:ijms221910388. [PMID: 34638728 PMCID: PMC8508622 DOI: 10.3390/ijms221910388] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/27/2021] [Revised: 09/14/2021] [Accepted: 09/17/2021] [Indexed: 02/06/2023] Open
Abstract
Soil health and fertility issues are constantly addressed in the agricultural industry. Through the continuous and prolonged use of chemical heavy agricultural systems, most agricultural lands have been impacted, resulting in plateaued or reduced productivity. As such, to invigorate the agricultural industry, we would have to resort to alternative practices that will restore soil health and fertility. Therefore, in recent decades, studies have been directed towards taking a Magellan voyage of the soil rhizosphere region, to identify the diversity, density, and microbial population structure of the soil, and predict possible ways to restore soil health. Microbes that inhabit this region possess niche functions, such as the stimulation or promotion of plant growth, disease suppression, management of toxicity, and the cycling and utilization of nutrients. Therefore, studies should be conducted to identify microbes or groups of organisms that have assigned niche functions. Based on the above, this article reviews the aboveground and below-ground microbiomes, their roles in plant immunity, physiological functions, and challenges and tools available in studying these organisms. The information collected over the years may contribute toward future applications, and in designing sustainable agriculture.
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Kumar A, Singh SK, Kant C, Verma H, Kumar D, Singh PP, Modi A, Droby S, Kesawat MS, Alavilli H, Bhatia SK, Saratale GD, Saratale RG, Chung SM, Kumar M. Microbial Biosurfactant: A New Frontier for Sustainable Agriculture and Pharmaceutical Industries. Antioxidants (Basel) 2021; 10:1472. [PMID: 34573103 PMCID: PMC8469275 DOI: 10.3390/antiox10091472] [Citation(s) in RCA: 38] [Impact Index Per Article: 12.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2021] [Revised: 09/08/2021] [Accepted: 09/13/2021] [Indexed: 11/16/2022] Open
Abstract
In the current scenario of changing climatic conditions and the rising global population, there is an urgent need to explore novel, efficient, and economical natural products for the benefit of humankind. Biosurfactants are one of the latest explored microbial synthesized biomolecules that have been used in numerous fields, including agriculture, pharmaceuticals, cosmetics, food processing, and environment-cleaning industries, as a source of raw materials, for the lubrication, wetting, foaming, emulsions formulations, and as stabilizing dispersions. The amphiphilic nature of biosurfactants have shown to be a great advantage, distributing themselves into two immiscible surfaces by reducing the interfacial surface tension and increasing the solubility of hydrophobic compounds. Furthermore, their eco-friendly nature, low or even no toxic nature, durability at higher temperatures, and ability to withstand a wide range of pH fluctuations make microbial surfactants preferable compared to their chemical counterparts. Additionally, biosurfactants can obviate the oxidation flow by eliciting antioxidant properties, antimicrobial and anticancer activities, and drug delivery systems, further broadening their applicability in the food and pharmaceutical industries. Nowadays, biosurfactants have been broadly utilized to improve the soil quality by improving the concentration of trace elements and have either been mixed with pesticides or applied singly on the plant surfaces for plant disease management. In the present review, we summarize the latest research on microbial synthesized biosurfactant compounds, the limiting factors of biosurfactant production, their application in improving soil quality and plant disease management, and their use as antioxidant or antimicrobial compounds in the pharmaceutical industries.
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Affiliation(s)
- Ajay Kumar
- Agriculture Research Organization, Volcani Center, Department of Postharvest Science, Rishon Lezzion 50250, Israel; (A.K.); (A.M.); (S.D.)
| | - Sandeep Kumar Singh
- Centre of Advance Study in Botany, Banaras Hindu University, Varanasi 221005, India; (S.K.S.); (D.K.); (P.P.S.)
| | - Chandra Kant
- Department of Botany, Dharma Samaj College, Aligarh 202001, India;
| | - Hariom Verma
- Department of Botany, B.R.D. Government Degree College, Sonbhadra, Duddhi 231218, India;
| | - Dharmendra Kumar
- Centre of Advance Study in Botany, Banaras Hindu University, Varanasi 221005, India; (S.K.S.); (D.K.); (P.P.S.)
| | - Prem Pratap Singh
- Centre of Advance Study in Botany, Banaras Hindu University, Varanasi 221005, India; (S.K.S.); (D.K.); (P.P.S.)
| | - Arpan Modi
- Agriculture Research Organization, Volcani Center, Department of Postharvest Science, Rishon Lezzion 50250, Israel; (A.K.); (A.M.); (S.D.)
| | - Samir Droby
- Agriculture Research Organization, Volcani Center, Department of Postharvest Science, Rishon Lezzion 50250, Israel; (A.K.); (A.M.); (S.D.)
| | - Mahipal Singh Kesawat
- Department of Genetics and Plant Breeding, Faculty of Agriculture, Sri Sri University, Cuttack 754006, India;
| | - Hemasundar Alavilli
- Department of Bioresources Engineering, Sejong University, Seoul 05006, Korea;
| | - Shashi Kant Bhatia
- Department of Biological Engineering, College of Engineering, Konkuk University, Seoul 05029, Korea;
| | | | - Rijuta Ganesh Saratale
- Research Institute of Biotechnology and Medical Converged Science, Dongguk University, Seoul 10326, Korea;
| | - Sang-Min Chung
- Department of Life Science, College of Life Science and Biotechnology, Dongguk University, Seoul 10326, Korea;
| | - Manu Kumar
- Department of Life Science, College of Life Science and Biotechnology, Dongguk University, Seoul 10326, Korea;
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Double agent indole-3-acetic acid (IAA): Mechanistic analysis of indole-3-acetaldehyde dehydrogenase AldA that synthesizes IAA, an auxin that aids bacterial virulence. Biosci Rep 2021; 41:229488. [PMID: 34369556 PMCID: PMC8385190 DOI: 10.1042/bsr20210598] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/14/2021] [Revised: 07/10/2021] [Accepted: 07/30/2021] [Indexed: 11/17/2022] Open
Abstract
The large diversity of organisms inhabiting various environmental niches on our planet are engaged in a lively exchange of biomolecules, including nutrients, hormones, and vitamins. In a quest to survive, organisms that we define as pathogens employ innovative methods to extract valuable resources from their host leading to an infection. One such instance is where plant-associated bacterial pathogens synthesize and deploy hormones or their molecular mimics to manipulate the physiology of the host plant. This commentary describes one such specific example—the mechanism of the enzyme AldA, an aldehyde dehydrogenase (ALDH) from the bacterial plant pathogen Pseudomonas syringae which produces the plant auxin hormone indole-3-acetic acid (IAA) by oxidizing the substrate indole-3-acetaldehyde (IAAld) using the cofactor nicotinamide adenine dinucleotide (NAD+) (Bioscience Reports (2020) 40(12), https://doi.org/10.1042/BSR20202959). Using mutagenesis, enzyme kinetics, and structural analysis, Zhang et al. established that the progress of the reaction hinges on the formation of two distinct conformations of NAD(H) during the reaction course. Additionally, a key mutation in the AldA active site ‘aromatic box’ changes the enzyme’s preference for an aromatic substrate to an aliphatic one. Our commentary concludes that such molecular level investigations help to establish the nature of the dynamics of NAD(H) in ALDH-catalyzed reactions, and further show that the key active site residues control substrate specificity. We also contemplate that insights from the present study can be used to engineer novel ALDH enzymes for environmental, health, and industrial applications.
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