• Reference Citation Analysis
  • v
  • v
  • Find an Article
Find an Article PDF (4616374)   Today's Articles (3150)   Subscriber (49396)
For: Zhang H, Yin L, Wang M, Yuan X, Liu X. Factors Affecting the Accuracy of Genomic Selection for Agricultural Economic Traits in Maize, Cattle, and Pig Populations. Front Genet 2019;10:189. [PMID: 30923535 PMCID: PMC6426750 DOI: 10.3389/fgene.2019.00189] [Citation(s) in RCA: 64] [Impact Index Per Article: 12.8] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/10/2018] [Accepted: 02/21/2019] [Indexed: 11/20/2022]  Open
Number Cited by Other Article(s)
1
Schreiber M, Jayakodi M, Stein N, Mascher M. Plant pangenomes for crop improvement, biodiversity and evolution. Nat Rev Genet 2024;25:563-577. [PMID: 38378816 DOI: 10.1038/s41576-024-00691-4] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 12/14/2023] [Indexed: 02/22/2024]
2
Meyenberg C, Braun V, Longin CFH, Thorwarth P. Feature engineering and parameter tuning: improving phenomic prediction ability in multi-environmental durum wheat breeding trials. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2024;137:188. [PMID: 39037501 PMCID: PMC11263437 DOI: 10.1007/s00122-024-04695-w] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/27/2023] [Accepted: 07/10/2024] [Indexed: 07/23/2024]
3
Hemstrom W, Grummer JA, Luikart G, Christie MR. Next-generation data filtering in the genomics era. Nat Rev Genet 2024:10.1038/s41576-024-00738-6. [PMID: 38877133 DOI: 10.1038/s41576-024-00738-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 04/25/2024] [Indexed: 06/16/2024]
4
Aguirre NC, Villalba PV, García MN, Filippi CV, Rivas JG, Martínez MC, Acuña CV, López AJ, López JA, Pathauer P, Palazzini D, Harrand L, Oberschelp J, Marcó MA, Cisneros EF, Carreras R, Martins Alves AM, Rodrigues JC, Hopp HE, Grattapaglia D, Cappa EP, Paniego NB, Marcucci Poltri SN. Comparison of ddRADseq and EUChip60K SNP genotyping systems for population genetics and genomic selection in Eucalyptus dunnii (Maiden). Front Genet 2024;15:1361418. [PMID: 38606359 PMCID: PMC11008695 DOI: 10.3389/fgene.2024.1361418] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/26/2023] [Accepted: 02/19/2024] [Indexed: 04/13/2024]  Open
5
Freitas LA, Savegnago RP, Alves AAC, Stafuzza NB, Pedrosa VB, Rocha RA, Rosa GJM, Paz CCP. Genome-enabled prediction of indicator traits of resistance to gastrointestinal nematodes in sheep using parametric models and artificial neural networks. Res Vet Sci 2024;166:105099. [PMID: 38091815 DOI: 10.1016/j.rvsc.2023.105099] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2023] [Revised: 11/15/2023] [Accepted: 11/19/2023] [Indexed: 01/01/2024]
6
Lozada DN, Sandhu KS, Bhatta M. Ridge regression and deep learning models for genome-wide selection of complex traits in New Mexican Chile peppers. BMC Genom Data 2023;24:80. [PMID: 38110866 PMCID: PMC10726521 DOI: 10.1186/s12863-023-01179-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Accepted: 12/05/2023] [Indexed: 12/20/2023]  Open
7
Nisa FU, Kaul H, Asif M, Amin I, Mrode R, Mansoor S, Mukhtar Z. Genetic insights into crossbred dairy cattle of Pakistan: exploring allele frequency, linkage disequilibrium, and effective population size at a genome-wide scale. Mamm Genome 2023;34:602-614. [PMID: 37804434 DOI: 10.1007/s00335-023-10019-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/27/2023] [Accepted: 09/13/2023] [Indexed: 10/09/2023]
8
Jurado-Ruiz F, Rousseau D, Botía JA, Aranzana MJ. GenoDrawing: An Autoencoder Framework for Image Prediction from SNP Markers. PLANT PHENOMICS (WASHINGTON, D.C.) 2023;5:0113. [PMID: 38239740 PMCID: PMC10795539 DOI: 10.34133/plantphenomics.0113] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 07/04/2023] [Accepted: 10/23/2023] [Indexed: 01/22/2024]
9
Weber SE, Chawla HS, Ehrig L, Hickey LT, Frisch M, Snowdon RJ. Accurate prediction of quantitative traits with failed SNP calls in canola and maize. FRONTIERS IN PLANT SCIENCE 2023;14:1221750. [PMID: 37936929 PMCID: PMC10627008 DOI: 10.3389/fpls.2023.1221750] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/12/2023] [Accepted: 10/05/2023] [Indexed: 11/09/2023]
10
Sadeqi MB, Ballvora A, Dadshani S, Léon J. Genetic Parameter and Hyper-Parameter Estimation Underlie Nitrogen Use Efficiency in Bread Wheat. Int J Mol Sci 2023;24:14275. [PMID: 37762585 PMCID: PMC10531695 DOI: 10.3390/ijms241814275] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/08/2023] [Revised: 09/07/2023] [Accepted: 09/14/2023] [Indexed: 09/29/2023]  Open
11
Alves AAC, Fernandes AFA, Lopes FB, Breen V, Hawken R, Gianola D, Rosa GJDM. (Quasi) multitask support vector regression with heuristic hyperparameter optimization for whole-genome prediction of complex traits: a case study with carcass traits in broilers. G3 (BETHESDA, MD.) 2023;13:jkad109. [PMID: 37216670 PMCID: PMC10411556 DOI: 10.1093/g3journal/jkad109] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/13/2023] [Revised: 03/13/2023] [Accepted: 04/24/2023] [Indexed: 05/24/2023]
12
Wolf MJ, Neumann GB, Kokuć P, Yin T, Brockmann GA, König S, May K. Genetic evaluations for endangered dual-purpose German Black Pied cattle using 50K SNPs, a breed-specific 200K chip, and whole-genome sequencing. J Dairy Sci 2023;106:3345-3358. [PMID: 37028956 DOI: 10.3168/jds.2022-22665] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/17/2022] [Accepted: 12/16/2022] [Indexed: 04/09/2023]
13
Alemu A, Batista L, Singh PK, Ceplitis A, Chawade A. Haplotype-tagged SNPs improve genomic prediction accuracy for Fusarium head blight resistance and yield-related traits in wheat. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2023;136:92. [PMID: 37009920 PMCID: PMC10068637 DOI: 10.1007/s00122-023-04352-8] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/27/2022] [Accepted: 03/21/2023] [Indexed: 06/19/2023]
14
Wu PY, Ou JH, Liao CT. Sample size determination for training set optimization in genomic prediction. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2023;136:57. [PMID: 36912999 PMCID: PMC10011335 DOI: 10.1007/s00122-023-04254-9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/26/2022] [Accepted: 11/07/2022] [Indexed: 06/18/2023]
15
Fernández-González J, Akdemir D, Isidro Y Sánchez J. A comparison of methods for training population optimization in genomic selection. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2023;136:30. [PMID: 36892603 PMCID: PMC9998580 DOI: 10.1007/s00122-023-04265-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/30/2022] [Accepted: 11/21/2022] [Indexed: 06/18/2023]
16
Schneider H, Heise J, Tetens J, Thaller G, Wellmann R, Bennewitz J. Genomic dominance variance analysis of health and milk production traits in German Holstein cattle. J Anim Breed Genet 2023. [PMID: 36872841 DOI: 10.1111/jbg.12765] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/13/2022] [Accepted: 02/12/2023] [Indexed: 03/07/2023]
17
Toro-Ospina AM, Faria RA, Dominguez-Castaño P, Santana ML, Gonzalez LG, Espasandin AC, Silva JAIV. Genotype-environment interaction for milk production of Gyr cattle in Brazil and Colombia. Genes Genomics 2023;45:135-143. [PMID: 35689753 DOI: 10.1007/s13258-022-01273-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/27/2021] [Accepted: 05/18/2022] [Indexed: 01/25/2023]
18
Tang Z, Yin L, Yin D, Zhang H, Fu Y, Zhou G, Zhao Y, Wang Z, Liu X, Li X, Zhao S. Development and application of an efficient genomic mating method to maximize the production performances of three-way crossbred pigs. Brief Bioinform 2023;24:6961793. [PMID: 36575830 DOI: 10.1093/bib/bbac587] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2022] [Revised: 11/24/2022] [Accepted: 11/30/2022] [Indexed: 12/29/2022]  Open
19
Sánchez-Roncancio C, García B, Gallardo-Hidalgo J, Yáñez JM. GWAS on Imputed Whole-Genome Sequence Variants Reveal Genes Associated with Resistance to Piscirickettsia salmonis in Rainbow Trout (Oncorhynchus mykiss). Genes (Basel) 2022;14:114. [PMID: 36672855 PMCID: PMC9859203 DOI: 10.3390/genes14010114] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/14/2022] [Revised: 12/27/2022] [Accepted: 12/28/2022] [Indexed: 12/31/2022]  Open
20
Atanda SA, Steffes J, Lan Y, Al Bari MA, Kim JH, Morales M, Johnson JP, Saludares R, Worral H, Piche L, Ross A, Grusak M, Coyne C, McGee R, Rao J, Bandillo N. Multi-trait genomic prediction improves selection accuracy for enhancing seed mineral concentrations in pea. THE PLANT GENOME 2022;15:e20260. [PMID: 36193571 DOI: 10.1002/tpg2.20260] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/27/2022] [Accepted: 08/10/2022] [Indexed: 06/16/2023]
21
Brzáková M, Bauer J, Steyn Y, Šplíchal J, Fulínová D. The prediction accuracies of linear-type traits in Czech Holstein cattle when using ssGBLUP or wssGBLUP. J Anim Sci 2022;100:skac369. [PMID: 36334266 PMCID: PMC9746800 DOI: 10.1093/jas/skac369] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/09/2022] [Accepted: 11/04/2022] [Indexed: 11/07/2022]  Open
22
Rembe M, Zhao Y, Wendler N, Oldach K, Korzun V, Reif JC. The Potential of Genome-Wide Prediction to Support Parental Selection, Evaluated with Data from a Commercial Barley Breeding Program. PLANTS 2022;11:plants11192564. [PMID: 36235430 PMCID: PMC9571379 DOI: 10.3390/plants11192564] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 08/29/2022] [Revised: 09/18/2022] [Accepted: 09/23/2022] [Indexed: 11/29/2022]
23
Zuffo LT, DeLima RO, Lübberstedt T. Combining datasets for maize root seedling traits increases the power of GWAS and genomic prediction accuracies. JOURNAL OF EXPERIMENTAL BOTANY 2022;73:5460-5473. [PMID: 35608947 PMCID: PMC9467658 DOI: 10.1093/jxb/erac236] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/11/2021] [Accepted: 06/06/2022] [Indexed: 05/13/2023]
24
Breen EJ, MacLeod IM, Ho PN, Haile-Mariam M, Pryce JE, Thomas CD, Daetwyler HD, Goddard ME. BayesR3 enables fast MCMC blocked processing for largescale multi-trait genomic prediction and QTN mapping analysis. Commun Biol 2022;5:661. [PMID: 35790806 PMCID: PMC9256732 DOI: 10.1038/s42003-022-03624-1] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/31/2021] [Accepted: 06/22/2022] [Indexed: 01/26/2023]  Open
25
Atanda SA, Govindan V, Singh R, Robbins KR, Crossa J, Bentley AR. Sparse testing using genomic prediction improves selection for breeding targets in elite spring wheat. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2022;135:1939-1950. [PMID: 35348821 PMCID: PMC9205816 DOI: 10.1007/s00122-022-04085-0] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/10/2022] [Accepted: 03/16/2022] [Indexed: 06/08/2023]
26
Genomic prediction of cotton fibre quality and yield traits using Bayesian regression methods. Heredity (Edinb) 2022;129:103-112. [PMID: 35523950 PMCID: PMC9338257 DOI: 10.1038/s41437-022-00537-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/31/2021] [Revised: 04/05/2022] [Accepted: 04/07/2022] [Indexed: 01/26/2023]  Open
27
Meher PK, Rustgi S, Kumar A. Performance of Bayesian and BLUP alphabets for genomic prediction: analysis, comparison and results. Heredity (Edinb) 2022;128:519-530. [PMID: 35508540 DOI: 10.1038/s41437-022-00539-9] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/31/2021] [Revised: 04/19/2022] [Accepted: 04/19/2022] [Indexed: 11/09/2022]  Open
28
Li J, Wang Y, Mukiibi R, Karisa B, Plastow GS, Li C. Integrative analyses of genomic and metabolomic data reveal genetic mechanisms associated with carcass merit traits in beef cattle. Sci Rep 2022;12:3389. [PMID: 35232965 PMCID: PMC8888742 DOI: 10.1038/s41598-022-06567-z] [Citation(s) in RCA: 6] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2021] [Accepted: 02/01/2022] [Indexed: 11/09/2022]  Open
29
Roth M, Beugnot A, Mary-Huard T, Moreau L, Charcosset A, Fiévet JB. Improving genomic predictions with inbreeding and nonadditive effects in two admixed maize hybrid populations in single and multienvironment contexts. Genetics 2022;220:6527635. [PMID: 35150258 PMCID: PMC8982028 DOI: 10.1093/genetics/iyac018] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/27/2021] [Accepted: 01/28/2022] [Indexed: 11/12/2022]  Open
30
Genomic Predictions of Phenotypes and Pseudo-Phenotypes for Viral Nervous Necrosis Resistance, Cortisol Concentration, Antibody Titer and Body Weight in European Sea Bass. Animals (Basel) 2022;12:ani12030367. [PMID: 35158690 PMCID: PMC8833701 DOI: 10.3390/ani12030367] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/16/2021] [Revised: 01/27/2022] [Accepted: 01/30/2022] [Indexed: 11/16/2022]  Open
31
Wang J, Yu J, Lipka AE, Zhang Z. Interpretation of Manhattan Plots and Other Outputs of Genome-Wide Association Studies. Methods Mol Biol 2022;2481:63-80. [PMID: 35641759 DOI: 10.1007/978-1-0716-2237-7_5] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/15/2023]
32
Cañas-Gutiérrez GP, Sepulveda-Ortega S, López-Hernández F, Navas-Arboleda AA, Cortés AJ. Inheritance of Yield Components and Morphological Traits in Avocado cv. Hass From "Criollo" "Elite Trees" via Half-Sib Seedling Rootstocks. FRONTIERS IN PLANT SCIENCE 2022;13:843099. [PMID: 35685008 PMCID: PMC9171141 DOI: 10.3389/fpls.2022.843099] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/24/2021] [Accepted: 02/10/2022] [Indexed: 05/11/2023]
33
Martins Oliveira IC, Bernardeli A, Soler Guilhen JH, Pastina MM. Genomic Prediction of Complex Traits in an Allogamous Annual Crop: The Case of Maize Single-Cross Hybrids. Methods Mol Biol 2022;2467:543-567. [PMID: 35451790 DOI: 10.1007/978-1-0716-2205-6_20] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 06/14/2023]
34
Fernández-Paz J, Cortés AJ, Hernández-Varela CA, Mejía-de-Tafur MS, Rodriguez-Medina C, Baligar VC. Rootstock-Mediated Genetic Variance in Cadmium Uptake by Juvenile Cacao (Theobroma cacao L.) Genotypes, and Its Effect on Growth and Physiology. FRONTIERS IN PLANT SCIENCE 2021;12:777842. [PMID: 35003163 PMCID: PMC8733334 DOI: 10.3389/fpls.2021.777842] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/15/2021] [Accepted: 11/12/2021] [Indexed: 05/02/2023]
35
Atashi H, Wilmot H, Gengler N. The pattern of linkage disequilibrium in Dual-Purpose Belgian Blue cattle. J Anim Breed Genet 2021;139:320-329. [PMID: 34859921 DOI: 10.1111/jbg.12662] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/14/2021] [Revised: 11/14/2021] [Accepted: 11/22/2021] [Indexed: 11/27/2022]
36
Comparison of regression tree-based methods in genomic selection. J Genet 2021. [DOI: 10.1007/s12041-021-01334-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/19/2022]
37
Tilhou NW, Casler MD. Subsampling and DNA pooling can increase gains through genomic selection in switchgrass. THE PLANT GENOME 2021;14:e20149. [PMID: 34626166 DOI: 10.1002/tpg2.20149] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/16/2021] [Accepted: 07/22/2021] [Indexed: 06/13/2023]
38
Singh RK, Prasad M. Big genomic data analysis leads to more accurate trait prediction in hybrid breeding for yield enhancement in crop plants. PLANT CELL REPORTS 2021;40:2009-2011. [PMID: 34309724 DOI: 10.1007/s00299-021-02761-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/25/2021] [Accepted: 07/20/2021] [Indexed: 06/13/2023]
39
Isidro y Sánchez J, Akdemir D. Training Set Optimization for Sparse Phenotyping in Genomic Selection: A Conceptual Overview. FRONTIERS IN PLANT SCIENCE 2021;12:715910. [PMID: 34589099 PMCID: PMC8475495 DOI: 10.3389/fpls.2021.715910] [Citation(s) in RCA: 12] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 05/27/2021] [Accepted: 08/10/2021] [Indexed: 06/13/2023]
40
Esuma W, Ozimati A, Kulakow P, Gore MA, Wolfe MD, Nuwamanya E, Egesi C, Kawuki RS. Effectiveness of genomic selection for improving provitamin A carotenoid content and associated traits in cassava. G3 (BETHESDA, MD.) 2021;11:jkab160. [PMID: 33963852 PMCID: PMC8496257 DOI: 10.1093/g3journal/jkab160] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/31/2021] [Accepted: 04/26/2021] [Indexed: 11/14/2022]
41
Kim M, Nguyen TTP, Ahn JH, Kim GJ, Sim SC. Genome-wide association study identifies QTL for eight fruit traits in cultivated tomato (Solanum lycopersicum L.). HORTICULTURE RESEARCH 2021;8:203. [PMID: 34465758 PMCID: PMC8408251 DOI: 10.1038/s41438-021-00638-4] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2021] [Revised: 06/19/2021] [Accepted: 06/25/2021] [Indexed: 05/28/2023]
42
Impact of Marker Pruning Strategies Based on Different Measurements of Marker Distance on Genomic Prediction in Dairy Cattle. Animals (Basel) 2021;11:ani11071992. [PMID: 34359120 PMCID: PMC8300388 DOI: 10.3390/ani11071992] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/06/2021] [Revised: 06/27/2021] [Accepted: 06/28/2021] [Indexed: 11/16/2022]  Open
43
Gore D, Okeno T, Muasya T, Mburu J. Improved response to selection in dairy goat breeding programme through reproductive technology and genomic selection in the tropics. Small Rumin Res 2021. [DOI: 10.1016/j.smallrumres.2021.106397] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/21/2022]
44
Derbyshire MC, Khentry Y, Severn-Ellis A, Mwape V, Saad NSM, Newman TE, Taiwo A, Regmi R, Buchwaldt L, Denton-Giles M, Batley J, Kamphuis LG. Modeling first order additive × additive epistasis improves accuracy of genomic prediction for sclerotinia stem rot resistance in canola. THE PLANT GENOME 2021;14:e20088. [PMID: 33629543 DOI: 10.1002/tpg2.20088] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/30/2020] [Accepted: 01/13/2021] [Indexed: 06/12/2023]
45
Genomic Prediction in Local Breeds: The Rendena Cattle as a Case Study. Animals (Basel) 2021;11:ani11061815. [PMID: 34207091 PMCID: PMC8234894 DOI: 10.3390/ani11061815] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/26/2021] [Revised: 06/16/2021] [Accepted: 06/16/2021] [Indexed: 01/26/2023]  Open
46
Salek Ardestani S, Jafarikia M, Sargolzaei M, Sullivan B, Miar Y. Genomic Prediction of Average Daily Gain, Back-Fat Thickness, and Loin Muscle Depth Using Different Genomic Tools in Canadian Swine Populations. Front Genet 2021;12:665344. [PMID: 34149806 PMCID: PMC8209496 DOI: 10.3389/fgene.2021.665344] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/07/2021] [Accepted: 04/15/2021] [Indexed: 12/12/2022]  Open
47
Rice BR, Lipka AE. Diversifying maize genomic selection models. MOLECULAR BREEDING : NEW STRATEGIES IN PLANT IMPROVEMENT 2021;41:33. [PMID: 37309328 PMCID: PMC10236107 DOI: 10.1007/s11032-021-01221-4] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.7] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/16/2020] [Accepted: 03/07/2021] [Indexed: 06/14/2023]
48
An Overview of Key Factors Affecting Genomic Selection for Wheat Quality Traits. PLANTS 2021;10:plants10040745. [PMID: 33920359 PMCID: PMC8069980 DOI: 10.3390/plants10040745] [Citation(s) in RCA: 6] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/18/2021] [Revised: 04/06/2021] [Accepted: 04/08/2021] [Indexed: 11/17/2022]
49
Knoch D, Werner CR, Meyer RC, Riewe D, Abbadi A, Lücke S, Snowdon RJ, Altmann T. Multi-omics-based prediction of hybrid performance in canola. TAG. THEORETICAL AND APPLIED GENETICS. THEORETISCHE UND ANGEWANDTE GENETIK 2021;134:1147-1165. [PMID: 33523261 PMCID: PMC7973648 DOI: 10.1007/s00122-020-03759-x] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/28/2020] [Accepted: 12/19/2020] [Indexed: 05/05/2023]
50
Mancin E, Sosa-Madrid BS, Blasco A, Ibáñez-Escriche N. Genotype Imputation to Improve the Cost-Efficiency of Genomic Selection in Rabbits. Animals (Basel) 2021;11:ani11030803. [PMID: 33805619 PMCID: PMC8000098 DOI: 10.3390/ani11030803] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/02/2021] [Revised: 03/04/2021] [Accepted: 03/05/2021] [Indexed: 01/19/2023]  Open
PrevPage 1 of 2 12Next
© 2004-2024 Baishideng Publishing Group Inc. All rights reserved. 7041 Koll Center Parkway, Suite 160, Pleasanton, CA 94566, USA