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Nagy KK, Takács K, Németh I, Varga B, Grolmusz V, Molnár M, Vértessy BG. Novel enzymes for biodegradation of polycyclic aromatic hydrocarbons identified by metagenomics and functional analysis in short-term soil microcosm experiments. Sci Rep 2024; 14:11608. [PMID: 38773163 PMCID: PMC11109138 DOI: 10.1038/s41598-024-61566-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/19/2023] [Accepted: 05/07/2024] [Indexed: 05/23/2024] Open
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are highly toxic, carcinogenic substances. On soils contaminated with PAHs, crop cultivation, animal husbandry and even the survival of microflora in the soil are greatly perturbed, depending on the degree of contamination. Most microorganisms cannot tolerate PAH-contaminated soils, however, some microbial strains can adapt to these harsh conditions and survive on contaminated soils. Analysis of the metagenomes of contaminated environmental samples may lead to discovery of PAH-degrading enzymes suitable for green biotechnology methodologies ranging from biocatalysis to pollution control. In the present study, our goal was to apply a metagenomic data search to identify efficient novel enzymes in remediation of PAH-contaminated soils. The metagenomic hits were further analyzed using a set of bioinformatics tools to select protein sequences predicted to encode well-folded soluble enzymes. Three novel enzymes (two dioxygenases and one peroxidase) were cloned and used in soil remediation microcosms experiments. The experimental design of the present study aimed at evaluating the effectiveness of the novel enzymes on short-term PAH degradation in the soil microcosmos model. The novel enzymes were found to be efficient for degradation of naphthalene and phenanthrene. Adding the inorganic oxidant CaO2 further increased the degrading potential of the novel enzymes for anthracene and pyrene. We conclude that metagenome mining paired with bioinformatic predictions, structural modelling and functional assays constitutes a powerful approach towards novel enzymes for soil remediation.
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Affiliation(s)
- Kinga K Nagy
- Department of Applied Biotechnology and Food Science, Faculty of Chemical Technology and Biotechnology, Budapest University of Technology and Economics, Műegyetem Rkp. 3., 1111, Budapest, Hungary
- Institute of Enzymology, Research Centre for Natural Sciences, Magyar Tudósok Körútja 2., 1117, Budapest, Hungary
| | - Kristóf Takács
- PIT Bioinformatics Group, Eötvös Loránd University, 1117, Budapest, Hungary
| | - Imre Németh
- Department of Applied Biotechnology and Food Science, Faculty of Chemical Technology and Biotechnology, Budapest University of Technology and Economics, Műegyetem Rkp. 3., 1111, Budapest, Hungary
| | - Bálint Varga
- PIT Bioinformatics Group, Eötvös Loránd University, 1117, Budapest, Hungary
| | - Vince Grolmusz
- PIT Bioinformatics Group, Eötvös Loránd University, 1117, Budapest, Hungary
- Uratim Ltd., 1118, Budapest, Hungary
| | - Mónika Molnár
- Department of Applied Biotechnology and Food Science, Faculty of Chemical Technology and Biotechnology, Budapest University of Technology and Economics, Műegyetem Rkp. 3., 1111, Budapest, Hungary.
| | - Beáta G Vértessy
- Department of Applied Biotechnology and Food Science, Faculty of Chemical Technology and Biotechnology, Budapest University of Technology and Economics, Műegyetem Rkp. 3., 1111, Budapest, Hungary.
- Institute of Enzymology, Research Centre for Natural Sciences, Magyar Tudósok Körútja 2., 1117, Budapest, Hungary.
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Jiang Y, Li C, Hou Z, Shi X, Zhang X, Gao Y, Deng SH. Pollutants removal and connections among sludge properties, metabolism potential and microbial characteristics in aerobic granular sequencing batch reactor for petrochemical wastewater treatment. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2023; 344:118715. [PMID: 37562254 DOI: 10.1016/j.jenvman.2023.118715] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2023] [Revised: 07/06/2023] [Accepted: 07/26/2023] [Indexed: 08/12/2023]
Abstract
Petrochemical wastewater contains inhibitory compounds such as aromatics that are toxic to microorganisms during biological treatment. The compact and layered structure and the high amount of extracellular polymeric substances (EPS) in aerobic granular sludge (AGS) can contribute to protecting microorganisms from the harsh environment. This study evaluated the changes in the granule properties, pollutants removal, microbial metabolic potential and molecular microbial characteristics of the AGS process for petrochemical wastewater treatment. Granules treating petrochemical wastewater had a higher SVI30/SVI5 value (0.94) than that treating synthetic wastewater. An increase in bioactivity and EPS secretion with higher bio-polymer composition, specifically the functional groups such as hydroxyl, alkoxy and amino in protein, was observed, which promoted biomass aggregation. The granules also had more than 2-fold higher specific oxygen utilization rate. The AGS-SBR process obtained an average COD removal of 93% during petrochemical wastewater treatment and an effluent bCOD of below 1 mg L-1. No obvious inhibition of nitrification and denitrification activity was observed in the processes attributed to the layered structure of AGS. The average effluent NH4+-N of 5.0 mg L-1 was obtained and TN removal efficiencies of over 80.0% was achieved. Molecular microbial analysis showed that abundant functional genera Stenotrophomonas and Pseudoxanthomonas contributed to the degradation of aromatics and other petroleum organic pollutants. They were enriched with the variation of group behavior while metabolisms of amino acids and carboxylic acids by the relevant functional genera (e.g., Cytophagia) were significantly inhibited. The enrichment of Flavobacterium and Thermomonas promoted nitrification and denitrification, respectively. This research revealed the rapid start-up, enhanced granule structural strength, high inhibition resistance and considerable performance of AGS-SBR for petrochemical wastewater treatment.
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Affiliation(s)
- Yu Jiang
- School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan, 430070, China
| | - Chaoyu Li
- School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan, 430070, China
| | - Zhaozhi Hou
- School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan, 430070, China
| | - Xueqing Shi
- School of Environmental and Municipal Engineering, Qingdao University of Technology, Qingdao, 266033, PR China
| | - Xiangling Zhang
- School of Civil Engineering and Architecture, Wuhan University of Technology, Wuhan, 430070, China
| | - Yaohuan Gao
- School of Human Settlements and Civil Engineering, Xi'an Jiaotong University, Xi'an, 710049, PR China
| | - Shi-Hai Deng
- School of Human Settlements and Civil Engineering, Xi'an Jiaotong University, Xi'an, 710049, PR China.
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Jiménez-Volkerink SN, Jordán M, Singleton DR, Grifoll M, Vila J. Bacterial benz(a)anthracene catabolic networks in contaminated soils and their modulation by other co-occurring HMW-PAHs. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2023; 328:121624. [PMID: 37059172 DOI: 10.1016/j.envpol.2023.121624] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/22/2022] [Revised: 04/04/2023] [Accepted: 04/09/2023] [Indexed: 05/09/2023]
Abstract
Polycyclic aromatic hydrocarbons (PAHs) are major environmental pollutants in a number of point source contaminated sites, where they are found embedded in complex mixtures containing different polyaromatic compounds. The application of bioremediation technologies is often constrained by unpredictable end-point concentrations enriched in recalcitrant high molecular weight (HMW)-PAHs. The aim of this study was to elucidate the microbial populations and potential interactions involved in the biodegradation of benz(a)anthracene (BaA) in PAH-contaminated soils. The combination of DNA stable isotope probing (DNA-SIP) and shotgun metagenomics of 13C-labeled DNA identified a member of the recently described genus Immundisolibacter as the key BaA-degrading population. Analysis of the corresponding metagenome assembled genome (MAG) revealed a highly conserved and unique genetic organization in this genus, including novel aromatic ring-hydroxylating dioxygenases (RHD). The influence of other HMW-PAHs on BaA degradation was ascertained in soil microcosms spiked with BaA and fluoranthene (FT), pyrene (PY) or chrysene (CHY) in binary mixtures. The co-occurrence of PAHs resulted in a significant delay in the removal of PAHs that were more resistant to biodegradation, and this delay was associated with relevant microbial interactions. Members of Immundisolibacter, associated with the biodegradation of BaA and CHY, were outcompeted by Sphingobium and Mycobacterium, triggered by the presence of FT and PY, respectively. Our findings highlight that interacting microbial populations modulate the fate of PAHs during the biodegradation of contaminant mixtures in soils.
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Affiliation(s)
- Sara N Jiménez-Volkerink
- Department of Genetics, Microbiology and Statistics, University of Barcelona, Av. Diagonal, 643, 08028, Barcelona, Spain
| | - Maria Jordán
- Department of Genetics, Microbiology and Statistics, University of Barcelona, Av. Diagonal, 643, 08028, Barcelona, Spain
| | - David R Singleton
- Department of Civil and Environmental Engineering, Pratt School of Engineering, Duke University, Durham, NC, 27708-0287, USA
| | - Magdalena Grifoll
- Department of Genetics, Microbiology and Statistics, University of Barcelona, Av. Diagonal, 643, 08028, Barcelona, Spain.
| | - Joaquim Vila
- Department of Genetics, Microbiology and Statistics, University of Barcelona, Av. Diagonal, 643, 08028, Barcelona, Spain
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Lara-Moreno A, Merchán F, Morillo E, Zampolli J, Di Gennaro P, Villaverde J. Genome analysis for the identification of genes involved in phenanthrene biodegradation pathway in Stenotrophomonas indicatrix CPHE1. Phenanthrene mineralization in soils assisted by integrated approaches. Front Bioeng Biotechnol 2023; 11:1158177. [PMID: 37214282 PMCID: PMC10192627 DOI: 10.3389/fbioe.2023.1158177] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2023] [Accepted: 04/14/2023] [Indexed: 05/24/2023] Open
Abstract
Phenanthrene (PHE) is a highly toxic compound, widely present in soils. For this reason, it is essential to remove PHE from the environment. Stenotrophomonas indicatrix CPHE1 was isolated from an industrial soil contaminated by polycyclic aromatic hydrocarbons (PAHs) and was sequenced to identify the PHE degrading genes. Dioxygenase, monooxygenase, and dehydrogenase gene products annotated in S. indicatrix CPHE1 genome were clustered into different trees with reference proteins. Moreover, S. indicatrix CPHE1 whole-genome sequences were compared to genes of PAHs-degrading bacteria retrieved from databases and literature. On these basis, reverse transcriptase-polymerase chain reaction (RT-PCR) analysis pointed out that cysteine dioxygenase (cysDO), biphenyl-2,3-diol 1,2-dioxygenase (bphC), and aldolase hydratase (phdG) were expressed only in the presence of PHE. Therefore, different techniques have been designed to improve the PHE mineralization process in five PHE artificially contaminated soils (50 mg kg-1), including biostimulation, adding a nutrient solution (NS), bioaugmentation, inoculating S. indicatrix CPHE1 which was selected for its PHE-degrading genes, and the use of 2-hydroxypropyl-β-cyclodextrin (HPBCD) as a bioavailability enhancer. High percentages of PHE mineralization were achieved for the studied soils. Depending on the soil, different treatments resulted to be successful; in the case of a clay loam soil, the best strategy was the inoculation of S. indicatrix CPHE1 and NS (59.9% mineralized after 120 days). In sandy soils (CR and R soils) the highest percentage of mineralization was achieved in presence of HPBCD and NS (87.3% and 61.3%, respectively). However, the combination of CPHE1 strain, HPBCD, and NS showed to be the most efficient strategy for sandy and sandy loam soils (LL and ALC soils showed 35% and 74.6%, respectively). The results indicated a high degree of correlation between gene expression and the rates of mineralization.
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Affiliation(s)
- Alba Lara-Moreno
- Department of Agrochemistry, Environmental Microbiology and Soil Conservation, Institute of Natural Resources and Agrobiology of Seville, Spanish National Research Council (IRNAS-CSIC), Seville, Spain
- Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Seville, Seville, Spain
| | - Francisco Merchán
- Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Seville, Seville, Spain
| | - Esmeralda Morillo
- Department of Agrochemistry, Environmental Microbiology and Soil Conservation, Institute of Natural Resources and Agrobiology of Seville, Spanish National Research Council (IRNAS-CSIC), Seville, Spain
| | - Jessica Zampolli
- Department of Biotechnology and Biosciences, University of Milano-Bicocca, Milano, Italy
| | - Patrizia Di Gennaro
- Department of Biotechnology and Biosciences, University of Milano-Bicocca, Milano, Italy
| | - Jaime Villaverde
- Department of Agrochemistry, Environmental Microbiology and Soil Conservation, Institute of Natural Resources and Agrobiology of Seville, Spanish National Research Council (IRNAS-CSIC), Seville, Spain
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Chauviat A, Meyer T, Favre-Bonté S. Versatility of Stenotrophomonas maltophilia: Ecological roles of RND efflux pumps. Heliyon 2023; 9:e14639. [PMID: 37089375 PMCID: PMC10113797 DOI: 10.1016/j.heliyon.2023.e14639] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/03/2023] [Revised: 03/13/2023] [Accepted: 03/14/2023] [Indexed: 03/30/2023] Open
Abstract
S. maltophilia is a widely distributed bacterium found in natural, anthropized and clinical environments. The genome of this opportunistic pathogen of environmental origin includes a large number of genes encoding RND efflux pumps independently of the clinical or environmental origin of the strains. These pumps have been historically associated with the uptake of antibiotics and clinically relevant molecules because they confer resistance to many antibiotics. However, considering the environmental origin of S. maltophilia, the ecological role of these pumps needs to be clarified. RND efflux systems are highly conserved within bacteria and encountered both in pathogenic and non-pathogenic species. Moreover, their evolutionary origin, conservation and multiple copies in bacterial genomes suggest a primordial role in cellular functions and environmental adaptation. This review is aimed at elucidating the ecological role of S. maltophilia RND efflux pumps in the environmental context and providing an exhaustive description of the environmental niches of S. maltophilia. By looking at the substrates and functions of the pumps, we propose different involvements and roles according to the adaptation of the bacterium to various niches. We highlight that i°) regulatory mechanisms and inducer molecules help to understand the conditions leading to their expression, and ii°) association and functional redundancy of RND pumps and other efflux systems demonstrate their complex role within S. maltophilia cells. These observations emphasize that RND efflux pumps play a role in the versatility of S. maltophilia.
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Lara-Moreno A, Aguilar-Romero I, Rubio-Bellido M, Madrid F, Villaverde J, Santos JL, Alonso E, Morillo E. Novel nonylphenol-degrading bacterial strains isolated from sewage sludge: Application in bioremediation of sludge. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 847:157647. [PMID: 35907537 DOI: 10.1016/j.scitotenv.2022.157647] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/23/2022] [Revised: 07/19/2022] [Accepted: 07/22/2022] [Indexed: 06/15/2023]
Abstract
Nonylphenol (NP) is an anthropogenic pollutant frequently found in sewage sludge due to the insufficient degrading effectiveness of conventional WWTPs and has attracted attention as an endocrine disruptor. The aim of this study was to isolate specific NP-degrading bacteria from sewage sludge to be used in the degradation of this contaminant through bioaugmentation processes in aqueous solution and sewage sludge. Up to eight different bacterial strains were isolated, six of them not previously described as NP degraders. Bacillus safensis CN12 presented the best NP degradation in solution, and glucose used as an external carbon source increased its effect, reaching DT50 degradation values (time to decline to half the initial concentration of the pollutant) of only 0.9 days and a complete degradation in <7 days. Four NP metabolites were identified throughout the biodegradation process, showing higher toxicity than the parent contaminant. In sewage sludge suspensions, the endogenous microbiota was capable of partially degrading NP, but a part remained adsorbed as bound residue. Bioaugmentation was used for the first time to remove NP from sewage sludge to obtain more environmentally friendly biosolids. However, B. safensis CN12 was not able to degrade NP due to its high adsorption on sludge, but the use of a cyclodextrin (HPBCD) as availability enhancer allowed us to extract NP and degrade it in solution. The addition of glucose as an external carbon source gave the best results since the metabolism of the sludge microbiota was activated, and HPBCD was able to remove NP from sewage sludge to the solution to be degraded by B. safensis CN12. These results indicate that B. safensis CN12 can be used to degrade NP in water and sewage sludge, but the method must be improved using consortia of B. safensis CN12 with other bacterial strains able to degrade the toxic metabolites produced.
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Affiliation(s)
- A Lara-Moreno
- Institute of Natural Resources and Agrobiology of Seville, Spanish National Research Council (IRNAS-CSIC), 41012 Seville, Spain; Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Seville, Seville, Spain
| | - I Aguilar-Romero
- Institute of Natural Resources and Agrobiology of Seville, Spanish National Research Council (IRNAS-CSIC), 41012 Seville, Spain
| | - M Rubio-Bellido
- Institute of Natural Resources and Agrobiology of Seville, Spanish National Research Council (IRNAS-CSIC), 41012 Seville, Spain
| | - F Madrid
- Institute of Natural Resources and Agrobiology of Seville, Spanish National Research Council (IRNAS-CSIC), 41012 Seville, Spain
| | - J Villaverde
- Institute of Natural Resources and Agrobiology of Seville, Spanish National Research Council (IRNAS-CSIC), 41012 Seville, Spain
| | - J L Santos
- Departamento de Química Analítica, Escuela Politécnica Superior, Universidad de Sevilla, C/ Virgen de África, 7, 41011 Seville, Spain
| | - E Alonso
- Departamento de Química Analítica, Escuela Politécnica Superior, Universidad de Sevilla, C/ Virgen de África, 7, 41011 Seville, Spain
| | - E Morillo
- Institute of Natural Resources and Agrobiology of Seville, Spanish National Research Council (IRNAS-CSIC), 41012 Seville, Spain.
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Aa I, Op A, Ujj I, Mt B. A critical review of oil spills in the Niger Delta aquatic environment: causes, impacts, and bioremediation assessment. ENVIRONMENTAL MONITORING AND ASSESSMENT 2022; 194:816. [PMID: 36131120 DOI: 10.1007/s10661-022-10424-x] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/13/2022] [Accepted: 08/30/2022] [Indexed: 06/15/2023]
Abstract
The Niger Delta region in South-South Nigeria, on Africa's West Coast, is densely populated. The region, which contains a substantial stock of crude oil and natural gas, has been nicknamed "the engine room" for Nigeria's economic development and progress. It is responsible for up to 90% of the country's economic growth (or gross domestic product/GDP). The region has multiple ecosystems, such as the aquatic environment, that are critical to the survival of the area's various habitats and living species. However, the same region has witnessed unjustifiable environmental pollution arising from oil activities over the years of exploration and production which has orchestrated negative consequences on the Niger Delta ecosystem. This has led to extended negative consequences on natural resources, which also have detrimental repercussions psychologically, ecologically, socially, economically, and physically which, in turn, impacts the overall health of the affected individuals. This write-up provides an overview of the major drivers of the oil leakage in Nigeria's Niger Delta ecosystem as well as the major impacts on the environment. It will also analyze numerous means of remediation in use and extend such for a more inclusive and productive option. Moreover, this review offers key measures that may help to maintain long-term policies for reducing adverse implications and increasing the living standard for the Niger Delta area's affected communities.
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Affiliation(s)
- Ikhumetse Aa
- Department of Microbiology, Federal University of Technology, Minna, Nigeria
| | - Abioye Op
- Department of Microbiology, Federal University of Technology, Minna, Nigeria.
| | - Ijah Ujj
- Department of Microbiology, Federal University of Technology, Minna, Nigeria
| | - Bankole Mt
- Department of Chemistry, Federal University of Technology, Minna, Nigeria
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Lara-Moreno A, Morillo E, Merchán F, Madrid F, Villaverde J. Bioremediation of a trifluralin contaminated soil using bioaugmentation with novel isolated bacterial strains and cyclodextrin. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 840:156695. [PMID: 35709999 DOI: 10.1016/j.scitotenv.2022.156695] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2022] [Revised: 05/24/2022] [Accepted: 06/10/2022] [Indexed: 06/15/2023]
Abstract
Trifluralin (TFL) is a highly persistent with a strong adsorption capacity on soil particles herbicide. This study was to isolate microbial consortia and bacterial strains from a soil with a historical application of pesticides to evaluate their potential to degrade TFL in soil. Different bioremediation techniques were considered for increasing the effectiveness of TFL degradation in soil. These techniques consisted of: i) biostimulation, using a nutrients solution (NS); ii) bioaugmentation, using a natural microbial consortium (NMC), seven individual bacterial strains isolated from NMC, and an artificial bacterial consortium formed by the seven TFL-degrading bacterial strains (ABC); iii) bioavailability enhancement, using a biodegradable compound, a randomly methylated cyclodextrin, RAMEB. Biostimulation using NS leads up to 34 % of soil TFL biodegraded after 100 d. When the contaminated soil was inoculated with NMC or ABC consortia, TFL loss increased up to 62 % and 74 %, respectively, with DT50 values (required time for the pollutant concentration to decline to half of its initial value) of 5.9 and 11 d. In the case of soil inoculation with the isolated individual bacterial strains, the extent of TFL biodegradation ranged widely from 2.3 % to 55 %. The most efficient bacterial strain was Arthrobacter aurescens CTFL7 which had not been previously described in the literature as a TFL-degrading bacterium. Bioaugmentation with CTFL7 bacterium was also tested in the presence of RAMEB, provoking a drastic increase in herbicide biodegradation up to 88 %, achieving a DT50 of only 19 d. Cyclodextrins had never been tested before for enhancement of TFL biodegradation. An ecotoxicity assay was performed to confirm that the proposed bioremediation techniques were also capable to reduce toxicity. A Microtox® test showed that after application A. aurescens CTF7 and A. aurescens CTF7 + RAMEB, the TFL-contaminated soil, which initially presented acute toxicity, became non-toxic at the end of the biodegradation experiments.
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Affiliation(s)
- A Lara-Moreno
- Institute of Natural Resources and Agrobiology of Seville, Spanish National Research Council (IRNAS-CSIC), Department of Agrochemistry, Environmental Microbiology and Soil Conservation, Seville, Spain; Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Seville, Seville, Spain
| | - E Morillo
- Institute of Natural Resources and Agrobiology of Seville, Spanish National Research Council (IRNAS-CSIC), Department of Agrochemistry, Environmental Microbiology and Soil Conservation, Seville, Spain
| | - F Merchán
- Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Seville, Seville, Spain
| | - F Madrid
- Institute of Natural Resources and Agrobiology of Seville, Spanish National Research Council (IRNAS-CSIC), Department of Agrochemistry, Environmental Microbiology and Soil Conservation, Seville, Spain
| | - J Villaverde
- Institute of Natural Resources and Agrobiology of Seville, Spanish National Research Council (IRNAS-CSIC), Department of Agrochemistry, Environmental Microbiology and Soil Conservation, Seville, Spain.
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Guo G, Liu C, Tian F, Ding K, Wang H, Zhang C, Yang F, Xu J. Bioaugmentation treatment of polycyclic aromatic hydrocarbon-polluted soil in a slurry bioreactor with a bacterial consortium and hydroxypropyl-β-cyclodextrin. ENVIRONMENTAL TECHNOLOGY 2022; 43:3231-3238. [PMID: 33945429 DOI: 10.1080/09593330.2021.1921042] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/09/2020] [Accepted: 04/16/2021] [Indexed: 06/12/2023]
Abstract
The aim of the study was to verify the effect of bioaugmentation by the bacterial consortium YS with hydroxypropyl-β-cyclodextrin (HPCD) in a soil slurry. The bacterial consortium YS was enriched from a petroleum-polluted soil using pyrene as sole carbon resource. After 3 weeks, the degradation rate of phenanthrene in CK increased from 22.58% to 55.23 and 78.21% in bioaugmentation (B) and HPCD + bioaugmentation (MB) respectively. The degradation rate of pyrene in CK increased from 17.33% to 51.10% and 60.32% in B and MB respectively in the slurry. The augmented YS persisted in the slurry as monitored by 16S rRNA gene high-throughput sequencing and outcompeted some indigenous bacteria. Enhanced polycyclic aromatic hydrocarbon (PAH) degradation was observed in the addition of HPCD due to the enhanced bioavailability of phenanthrene and pyrene. Additionally, the amount of PAH-degrading bacteria and enzymatic activity in bioaugmentation with HPCD were higher than that in the CK group. The results indicated that bioaugmentation with a bacterial consortium and HPCD is an environmentally friendly method for the bioremediation of PAH-polluted soil.
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Affiliation(s)
- Guang Guo
- College of Environmental Engineering, Nanjing Institute of Technology, Nanjing, People's Republic of China
| | - Chong Liu
- Chinese Academy of Agricultural Sciences, Institute of Environment and Sustainable Development in Agriculture, Beijing, People's Republic of China
| | - Fang Tian
- College of Environmental Engineering, Nanjing Institute of Technology, Nanjing, People's Republic of China
| | - Keqiang Ding
- College of Environmental Engineering, Nanjing Institute of Technology, Nanjing, People's Republic of China
| | - Huiya Wang
- College of Environmental Engineering, Nanjing Institute of Technology, Nanjing, People's Republic of China
| | - Can Zhang
- Center for Disease Prevention and Control of Chinese PLA, Beijing, People's Republic of China
| | - Feng Yang
- College of Environmental Engineering, Nanjing Institute of Technology, Nanjing, People's Republic of China
| | - Jin Xu
- College of Environmental Engineering, Nanjing Institute of Technology, Nanjing, People's Republic of China
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10
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Madrid F, Florido MC, Rubio-Bellido M, Villaverde J, Morillo E. Dissipation of a mix of priority PAHs in soils by using availability enhancers. Effect of aging and pollutant interactions. THE SCIENCE OF THE TOTAL ENVIRONMENT 2022; 837:155744. [PMID: 35526632 DOI: 10.1016/j.scitotenv.2022.155744] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2022] [Revised: 04/11/2022] [Accepted: 05/02/2022] [Indexed: 06/14/2023]
Abstract
A remediation strategy using three non-toxic availability enhancers (two cyclodextrins and a rhamnolipid biosurfactant) was applied to various soils artificially contaminated with a mix of Polycyclic Aromatic Hydrocarbons (PAHs) considered priority pollutants at two levels of contamination: only with 7 low molecular weight PAHs (LMW PAHs, 5 with 3-ring and 2 with 4-ring - fluoranthene and pyrene) or with 14 PAHs (from 3 to 6 rings). Natural attenuation of PAHs in all soils showed degradation capacity for the LMW PAHs, with a final content of LMW PAHs <5% of their initial concentration. Conversely, the rest of PAHs (high molecular weight PAHs, HMW) remained in the soils (61% - 83.5%), indicating abiotic dissipation of HMW PAHs due to formation of non-extractable residues in soils. The influence of the presence of HMW PAHs on the degradation of the 7 LMW PAHs was also tested, showing a general decrease in the time to obtain 50% dissipation (DT50), statistically significant for acenaphthene, acenaphthylene and fluorene. Availability enhancers showed different effects on PAHs dissipation. 2-hydroxypropyl-β-cyclodextrin (HP) decreased DT50 of some of the lighter PAHs, whereas the rhamnolipid (RL) caused a slight DT50 increase due to its initial toxicity on native soil microorganisms, but showing later high degradation rate for LMW PAHs. On the contrary, randomly methylated-β-cyclodextrin (RAMEB) slowed down PAHs degradation due to its high adsorption onto soil surface, blocking the desorption of PAHs from the soils. The high number of experimental factors not studied simultaneously before (soil type, co-contamination, availability enhancers and incubation time) allowed to conduct a statistical analysis which supported the conclusions reached. Principal Component Analysis separated the studied PAHs in 3 groups, in relation with their molecular weight and Kow. The first principal component was related with LMW PAHs, and separate the inefficient RAMEB from the other availability enhancers.
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Affiliation(s)
- F Madrid
- Instituto de Recursos Naturales y Agrobiología de Sevilla, Consejo Superior de Investigaciones Científicas (IRNAS), CSIC, Sevilla, Spain.
| | - M C Florido
- Departamento de Cristalografía, Mineralogía y Química Agrícola, Universidad de Sevilla, Sevilla, Spain
| | - M Rubio-Bellido
- Instituto de Recursos Naturales y Agrobiología de Sevilla, Consejo Superior de Investigaciones Científicas (IRNAS), CSIC, Sevilla, Spain
| | - J Villaverde
- Instituto de Recursos Naturales y Agrobiología de Sevilla, Consejo Superior de Investigaciones Científicas (IRNAS), CSIC, Sevilla, Spain
| | - E Morillo
- Instituto de Recursos Naturales y Agrobiología de Sevilla, Consejo Superior de Investigaciones Científicas (IRNAS), CSIC, Sevilla, Spain
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11
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Bio-Augmentation as an Emerging Strategy to Improve the Textile Compost Quality Using Identified Autochthonous Strains. APPLIED SCIENCES-BASEL 2022. [DOI: 10.3390/app12063160] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 11/17/2022]
Abstract
The present investigation is devoted, for the first time, to the potential of autochthonous inoculums through bio-augmentation tests to improve the compost quality and to decrease the composting time during composting of textile waste. For this reason, three strains were isolated from a mixture of textile waste, green waste, paper, and cardboard waste, and therefore identified as Streptomyces cellulosae, Achromobacter xylosoxidans, and Serratia liquefaciens, employed using bio-augmentation test. The organic matter decaying was assessed according to three different inoculums doses, separately and in consortium (4%, 6%, and 8%), to describe the effect of bio-augmentation process on the organic matter decaying. Indeed, these three strains and their consortium have shown a strong potential of organic matter degradation, equally the bacterial consortium showed a total organic carbon degradation of 20.3%, total Kjeldahl nitrogen of 1.52%, and a Carbon/Nitrogen ratio of 13.36. Compost maturity has been completed after only 12 weeks of treatment instead of 44 weeks using the classical treatment by composting. Ultimately, according to these results, bio-augmentation could be an emerging and promising strategy to accelerate the composting process of solid waste, especially in the case of industrial waste. Equally, it could be an effective tool to avoid the accumulation of industrial waste disposal in public landfills and/or nature while allowing their treatment.
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12
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Cao X, Cui X, Xie M, Zhao R, Xu L, Ni S, Cui Z. Amendments and bioaugmentation enhanced phytoremediation and micro-ecology for PAHs and heavy metals co-contaminated soils. JOURNAL OF HAZARDOUS MATERIALS 2022; 426:128096. [PMID: 34952500 DOI: 10.1016/j.jhazmat.2021.128096] [Citation(s) in RCA: 41] [Impact Index Per Article: 20.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2021] [Revised: 12/13/2021] [Accepted: 12/14/2021] [Indexed: 06/14/2023]
Abstract
Co-existence of polycyclic aromatic hydrocarbons (PAHs) and multi-metals challenges the decontamination of large-scale contaminated sites. This study aims to comprehensively evaluate the remediation potential of intensified phytoremediation in coping with complex co-contaminated soils. Results showed that the removal of PAHs and heavy metals is time-dependent, pollution-relevant, and plant-specific. Removal of sixteen PAHs by Medicago sativa L. (37.3%) was significantly higher than that of Solanum nigrum L. (20.7%) after 30 days. S. nigrum L. removed higher amounts of Cd than Zn and Pb, while M. sativa L. uptake more Zn. Nevertheless, amendments and microbial agents significantly increased the phytoremediation efficiency of pollutants and shortened the gap between plants. Cd removal and PAHs dissipation reached up to 80% and 90% after 90 days for both plants. Heavy metal stability in soil was promoted after the intensified phytoremediation. Plant lipid peroxidation was alleviated, regulated by changed antioxidant defense systems (superoxide dismutase, peroxidase, catalase). Soil enzyme activities including dehydrogenase, urease, and catalase increased up to 5-fold. Soil bacterial diversity and structure were changed, being largely composed of Proteobacteria, Actinobacteria, Patescibacteria, Bacteroidetes, and Firmicutes. These findings provide a green and sustainable approach to decontaminating complex-polluted environments with comprehensive improvement of soil health.
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Affiliation(s)
- Xiufeng Cao
- School of Environmental Science and Engineering, Shandong University, 72 Binhai Road, Jimo District, Qingdao 266237, Shandong, PR China
| | - Xiaowei Cui
- School of Environmental Science and Engineering, Shanghai Jiao Tong University, Shanghai 200030, PR China
| | - Meng Xie
- School of Environmental Science and Engineering, Shandong University, 72 Binhai Road, Jimo District, Qingdao 266237, Shandong, PR China
| | - Rui Zhao
- School of Environmental Science and Engineering, Shandong University, 72 Binhai Road, Jimo District, Qingdao 266237, Shandong, PR China
| | - Lei Xu
- School of Environmental Science and Engineering, Shandong University, 72 Binhai Road, Jimo District, Qingdao 266237, Shandong, PR China
| | - Shouqing Ni
- School of Environmental Science and Engineering, Shandong University, 72 Binhai Road, Jimo District, Qingdao 266237, Shandong, PR China
| | - Zhaojie Cui
- School of Environmental Science and Engineering, Shandong University, 72 Binhai Road, Jimo District, Qingdao 266237, Shandong, PR China.
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13
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Yeferni M, Ben Saïd O, Mahmoudi E, Essid N, Hedfi A, Almalki M, Pacioglu O, Dervishi A, Boufahja F. Effectiveness of Shewanella oneidensis bioaugmentation in the bioremediation of phenanthrene-contaminated sediments and possible consortia with omnivore-carnivore meiobenthic nematodes. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 292:118281. [PMID: 34626706 DOI: 10.1016/j.envpol.2021.118281] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/08/2021] [Revised: 09/28/2021] [Accepted: 10/03/2021] [Indexed: 06/13/2023]
Abstract
This study was conducted to assess the impact and efficiency of the bioaugmentation as a bioremediation technique in annoying effects of a polycyclic aromatic hydrocarbon (phenanthrene) on a community of free-living nematodes from Bizerte bay (Tunisia). For this purpose, closed microcosms were exposed to three doses of phananthrene (0.1 μg kg-1, 1 μg kg-1 and 10 μg kg-1), in combination or not with a strain of Shewanella oneidensis. After 40 days of the exposure, results were obtained at the numerical, taxonomic and feeding levels. The results of univariate analyses revealed significant decreases in most univariate indices for phenanthrene treated communities compared to controls, with a discernible increase in the proportion of epistrate feeders. After bioaugmentation, similar patterns were observed for univariate and multivariate analyses, with the exception of the highest treatment, which showed no difference from the controls. The results obtained showed that the bioaugmentation with Shewanellea oneidensis was highly effective in reducing the negative impact of the highest dose of phenanthrene (10 μg kg-1 Dry Weight) tested on meiobenthic nematodes. Furthermore, a combination of Shewanellea oneidensis and four omnivore-carnivore nematode taxa could be suggested as an effective method in the bioremediation of phenanthrene-contaminated sediment.
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Affiliation(s)
- Mounir Yeferni
- University of Carthage, Faculty of Sciences of Bizerte, LR01ES14 Laboratory of Environment Biomonitoring, Coastal Ecology and Ecotoxicology Unit, 7021, Zarzouna, Tunisia
| | - Olfa Ben Saïd
- University of Carthage, Faculty of Sciences of Bizerte, LR01ES14 Laboratory of Environment Biomonitoring, Coastal Ecology and Ecotoxicology Unit, 7021, Zarzouna, Tunisia
| | - Ezzeddine Mahmoudi
- University of Carthage, Faculty of Sciences of Bizerte, LR01ES14 Laboratory of Environment Biomonitoring, Coastal Ecology and Ecotoxicology Unit, 7021, Zarzouna, Tunisia
| | - Naceur Essid
- University of Carthage, Faculty of Sciences of Bizerte, LR01ES14 Laboratory of Environment Biomonitoring, Coastal Ecology and Ecotoxicology Unit, 7021, Zarzouna, Tunisia
| | - Amor Hedfi
- Department of Biology, College of Sciences, Taif University, P.O. Box 11099, Taif, 21944, Saudi Arabia
| | - Mohammed Almalki
- Department of Biology, College of Sciences, Taif University, P.O. Box 11099, Taif, 21944, Saudi Arabia
| | - Octavian Pacioglu
- National Institute of Research and Development for Biological Sciences, Bucharest, Romania
| | - Aida Dervishi
- Department of Biotechnology, Faculty of Natural Sciences, University of Tirana, Zog I, 25/1, 1001, Tirana, Albania
| | - Fehmi Boufahja
- University of Carthage, Faculty of Sciences of Bizerte, LR01ES14 Laboratory of Environment Biomonitoring, Coastal Ecology and Ecotoxicology Unit, 7021, Zarzouna, Tunisia.
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14
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Ferraro A, Massini G, Miritana VM, Panico A, Pontoni L, Race M, Rosa S, Signorini A, Fabbricino M, Pirozzi F. Bioaugmentation strategy to enhance polycyclic aromatic hydrocarbons anaerobic biodegradation in contaminated soils. CHEMOSPHERE 2021; 275:130091. [PMID: 33984916 DOI: 10.1016/j.chemosphere.2021.130091] [Citation(s) in RCA: 21] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/14/2020] [Revised: 02/08/2021] [Accepted: 02/19/2021] [Indexed: 06/12/2023]
Abstract
This paper proposes an innovative bioaugmentation approach for the remediation of polycyclic aromatic hydrocarbon (PAH) contaminated soils, based on a novel habitat-based strategy. This approach was tested using two inocula (i-24 and i-96) previously enriched through an anaerobic digestion process on wheat straw. It relies on the application of allochthonous microorganisms characterized by specific functional roles obtained by mimicking a natural hydrolytic environment such as the rumen. The inocula efficiency was tested in presence of naphthalene alone, benzo[a]pyrene alone, and a mix of both of them. In single-contamination tests, i-24 inoculum showed the highest biodegradation rates (84.7% for naphthalene and 51.7% for benzo[a]pyrene). These values were almost 1.2 times higher than those obtained for both contaminants with i-96 inoculum and in the control test in presence of naphthalene alone, while they were 3 times higher compared to the control test in presence of benzo[a]pyrene alone. In mixed-contamination tests, i-96 inoculum showed final biodegradation efficiencies for naphthalene and benzo[a]pyrene between 1.1 and 1.5 higher than i-24 inoculum or autochthonous biomass. Total microbial abundances increased in the bioaugmented tests in line with the PAH degradation. The microbial community structure showed the highest diversity at the end of the experiment in almost all cases. Values of the Firmicutes active fraction up to 7 times lower were observed in the i-24 bioaugmented tests compared to i-96 and control tests. This study highlights a successful bioaugmentation strategy with biological components that can be reused in multiple processes supporting an integrated and environmentally sustainable bioremediation system.
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Affiliation(s)
- Alberto Ferraro
- Department of Civil, Architectural and Environmental Engineering, University of Naples "Federico II", Via Claudio 21, 80125, Naples, Italy; Department of Civil, Environmental, Land, Building Engineering and Chemistry, Polytechnic University of Bari, Via E. Orabona 4, 70125, Bari, Italy
| | - Giulia Massini
- Department of Energy Technologies, Italian National Agency for New Technologies, Energy and Sustainable Economic Development (ENEA), Via Anguillarese 301, 00123, Rome, Italy
| | - Valentina Mazzurco Miritana
- Department of Energy Technologies, Italian National Agency for New Technologies, Energy and Sustainable Economic Development (ENEA), Via Anguillarese 301, 00123, Rome, Italy
| | - Antonio Panico
- Department of Engineering, University of Campania "L. Vanvitelli", Via Roma, 29, 81031, Aversa, Italy; Telematic University Pegaso, Piazza Trieste e Trento 48, Naples, Italy.
| | - Ludovico Pontoni
- Department of Civil, Architectural and Environmental Engineering, University of Naples "Federico II", Via Claudio 21, 80125, Naples, Italy
| | - Marco Race
- Department of Civil and Mechanical Engineering, University of Cassino and Southern Lazio, Via di Biasio 43, 03043, Cassino, Italy
| | - Silvia Rosa
- Department of Energy Technologies, Italian National Agency for New Technologies, Energy and Sustainable Economic Development (ENEA), Via Anguillarese 301, 00123, Rome, Italy
| | - Antonella Signorini
- Department of Energy Technologies, Italian National Agency for New Technologies, Energy and Sustainable Economic Development (ENEA), Via Anguillarese 301, 00123, Rome, Italy
| | - Massimiliano Fabbricino
- Department of Civil, Architectural and Environmental Engineering, University of Naples "Federico II", Via Claudio 21, 80125, Naples, Italy
| | - Francesco Pirozzi
- Department of Civil, Architectural and Environmental Engineering, University of Naples "Federico II", Via Claudio 21, 80125, Naples, Italy
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15
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Lara-Moreno A, Morillo E, Merchán F, Villaverde J. A comprehensive feasibility study of effectiveness and environmental impact of PAH bioremediation using an indigenous microbial degrader consortium and a novel strain Stenotrophomonas maltophilia CPHE1 isolated from an industrial polluted soil. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2021; 289:112512. [PMID: 33848881 DOI: 10.1016/j.jenvman.2021.112512] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2020] [Revised: 03/04/2021] [Accepted: 03/27/2021] [Indexed: 06/12/2023]
Abstract
Polycyclic Aromatic Hydrocarbons (PAHs) are major toxic and recalcitrant pollutants in the environment. This study assessed the capacity of an isolated soil microbial consortium (OMC) to biodegrade PAHs. OMC was able to reach 100% biodegradation of naphthalene, acenaphthylene, acenaphthene, fluorene and phenanthrene in solution, and up to 76% and 50% of anthracene and fluoranthene, respectively, from a mix of 16 PAHs. To measure phenanthrene (PHE) mineralization, OMC and eight strains isolated from OMC were used and identified by PCR amplification of the gene 16S ribosomal RNA. A novel Stenotrophomonas maltophilia CPHE1, not previously described as a PAH degrader, was able to mineralize almost 40% PHE and biodegrade 90.5% in solution, in comparison to OMC that reached 100% PHE degradation, but only 18.8% mineralization. Based on metabolites identified during PHE degradation and on the detection of two genes (PAH RHDα and nahAc) in OMC consortium, two possible via were described for its degradation, through salicylic and phthalic acid. PAH RHDα, which codified the first step on PHE biodegradation pathway, was also found in the DNA of S. maltophilia CPHE1. An ecotoxicology study showed that PHE bioremediation after inoculating S. maltophilia CPHE1 for 30 days decreased by half the solution toxicity.
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Affiliation(s)
- Alba Lara-Moreno
- Institute of Natural Resources and Agrobiology of Seville, Department of Agrochemistry, Environmental Microbiology and Soil Conservation, Science Research Council (IRNAS-CSIC), Seville, Spain; Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Seville, Seville, Spain.
| | - Esmeralda Morillo
- Institute of Natural Resources and Agrobiology of Seville, Department of Agrochemistry, Environmental Microbiology and Soil Conservation, Science Research Council (IRNAS-CSIC), Seville, Spain
| | - Francisco Merchán
- Department of Microbiology and Parasitology, Faculty of Pharmacy, University of Seville, Seville, Spain
| | - Jaime Villaverde
- Institute of Natural Resources and Agrobiology of Seville, Department of Agrochemistry, Environmental Microbiology and Soil Conservation, Science Research Council (IRNAS-CSIC), Seville, Spain
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16
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Yu F, Li Y, Wang H, Peng T, Wu YR, Hu Z. Microbial debromination of hexabromocyclododecanes. Appl Microbiol Biotechnol 2021; 105:4535-4550. [PMID: 34076715 DOI: 10.1007/s00253-021-11095-3] [Citation(s) in RCA: 11] [Impact Index Per Article: 3.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/14/2020] [Revised: 12/22/2020] [Accepted: 01/03/2021] [Indexed: 11/29/2022]
Abstract
Hexabromocyclododecanes (HBCDs), a new sort of brominated flame retardants (BFRs), are globally prevalent and recalcitrant toxic environmental pollutants. HBCDs have been found in many environmental media and even in the human body, leading to serious health concerns. HBCDs are biodegradable in the environment. By now, dozens of bacteria have been discovered with the ability to transform HBCDs. Microbial debromination of HBCDs is via HBr-elimination, HBr-dihaloelimination, and hydrolytic debromination. Biotic transformation of HBCDs yields many hydroxylated and lower brominated compounds which lack assessment of ecological toxicity. Bioremediation of HBCD pollution has only been applied in the laboratory. Here, we review the current knowledge about microbial debromination of HBCDs, aiming to promote the bioremediation applied in HBCD contaminated sites. KEY POINTS: • Microbial debromination of HBCDs is via hydrolytic debromination, HBr-elimination, and HBr-dihaloelimination. • Newly occurred halogenated contaminants such as HBCDs hitch the degradation pathway tamed by previously discharged anthropogenic organohalides. • Strategy that combines bioaugmentation with phytoremediation for bioremediation of HBCD pollution is promising.
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Affiliation(s)
- Fei Yu
- Department of Biology, Science College, Shantou University, Shantou, 515063, Guangdong Province, People's Republic of China
| | - Yuyang Li
- Department of Biology, Science College, Shantou University, Shantou, 515063, Guangdong Province, People's Republic of China
| | - Hui Wang
- Department of Biology, Science College, Shantou University, Shantou, 515063, Guangdong Province, People's Republic of China
| | - Tao Peng
- Department of Biology, Science College, Shantou University, Shantou, 515063, Guangdong Province, People's Republic of China
| | - Yi-Rui Wu
- Department of Biology, Science College, Shantou University, Shantou, 515063, Guangdong Province, People's Republic of China
| | - Zhong Hu
- Department of Biology, Science College, Shantou University, Shantou, 515063, Guangdong Province, People's Republic of China.
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17
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Morillo E, Madrid F, Lara-Moreno A, Villaverde J. Soil bioremediation by cyclodextrins. A review. Int J Pharm 2020; 591:119943. [DOI: 10.1016/j.ijpharm.2020.119943] [Citation(s) in RCA: 28] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/01/2020] [Revised: 09/28/2020] [Accepted: 09/29/2020] [Indexed: 01/12/2023]
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18
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Garbisu C, Alkorta I, Kidd P, Epelde L, Mench M. Keep and promote biodiversity at polluted sites under phytomanagement. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2020; 27:44820-44834. [PMID: 32975751 DOI: 10.1007/s11356-020-10854-5] [Citation(s) in RCA: 9] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/03/2020] [Accepted: 09/13/2020] [Indexed: 06/11/2023]
Abstract
The phytomanagement concept combines a sustainable reduction of pollutant linkages at risk-assessed contaminated sites with the generation of both valuable biomass for the (bio)economy and ecosystem services. One of the potential benefits of phytomanagement is the possibility to increase biodiversity in polluted sites. However, the unique biodiversity present in some polluted sites can be severely impacted by the implementation of phytomanagement practices, even resulting in the local extinction of endemic ecotypes or species of great conservation value. Here, we highlight the importance of promoting measures to minimise the potential adverse impact of phytomanagement on biodiversity at polluted sites, as well as recommend practices to increase biodiversity at phytomanaged sites without compromising its effectiveness in terms of reduction of pollutant linkages and the generation of valuable biomass and ecosystem services.
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Affiliation(s)
- Carlos Garbisu
- Department of Conservation of Natural Resources, Soil Microbial Ecology Group, NEIKER-Basque Institute for Agricultural Research and Development, Basque Research and Technology Alliance (BRTA), Parque Científico y Tecnológico de Bizkaia P812, E-48160, Derio, Spain.
| | - Itziar Alkorta
- Department of Biochemistry and Molecular Biology, University of the Basque Country, P. O. Box 644, 48080, Bilbao, Spain
| | - Petra Kidd
- Consejo Superior de Investigaciones Científicas (CSIC), Instituto de Investigacións Agrobiolóxicas de Galicia (IIAG), 15780, Santiago de Compostela, Spain
| | - Lur Epelde
- Department of Conservation of Natural Resources, Soil Microbial Ecology Group, NEIKER-Basque Institute for Agricultural Research and Development, Basque Research and Technology Alliance (BRTA), Parque Científico y Tecnológico de Bizkaia P812, E-48160, Derio, Spain
| | - Michel Mench
- INRAE, BIOGECO, University of Bordeaux, F-33615, Pessac, France
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