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Rivero M, Gutiérrez-Cacciabue D, Rajal VB, Irazusta VP. Factorial designs are accurate tools to pick up the most promising extremophiles for future biosurfactant production. THE SCIENCE OF THE TOTAL ENVIRONMENT 2025; 959:178193. [PMID: 39721534 DOI: 10.1016/j.scitotenv.2024.178193] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/14/2024] [Revised: 09/24/2024] [Accepted: 12/17/2024] [Indexed: 12/28/2024]
Abstract
In this study, five strains previously isolated from black liquor (BL) and vinasse (V) were tested to assess the most promising regarding its capacity of biosurfactant production. For that, four factorial designs of two factors at two levels (22) were run for each strain. Selected factors were the production time and the composition media, while the surface tension reduction and optical density were the responses variables. Production media prepared just with V or BL exhibited minimal biosurfactant production, while better results were achieved when media were formulated with nutrient broth (NB), olive oil (Oo), and a percentage of V or BL. Result showed that Bacillus sp. b1 reported the highest surface tension reduction (29.39 mN/m and OD = 8.7) using 5 % BL, 5 g/l NB and 11.5 g/l Oo during 2 to 4 days followed by Lactobacillus sp. a1 (19.47 mN/m and OD = 10.87) using 1 % V, 1 g/l NB and 2.5 g/l Oo during 2 to 4 days. The other strains also showed promising results (Alkalihalobacillus sp. b2: 16.91 mN/m; Pichia sp. a6: 13.8 mN/m; Lactobacillus sp. a5: 13.66 mN/m). This study provides crucial insights regarding the ability of these particular extremophiles strains of producing biosurfactants with the hope of optimizing the process and be able to scale up the production. This will be a huge step towards the development of environmentally friendly bioproduct which can eventually compete with synthetic surfactants.
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Affiliation(s)
- Mariano Rivero
- Instituto de Investigaciones para la Industria Química (INIQUI), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET) - Universidad Nacional de Salta (UNSa), Argentina
| | - Dolores Gutiérrez-Cacciabue
- Instituto de Ingeniería Civil y Medio Ambiente Salta (ICMASa), CONICET, UNSa; Facultad de Ingeniería, UNSa, Argentina
| | - Verónica Beatriz Rajal
- Instituto de Investigaciones para la Industria Química (INIQUI), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET) - Universidad Nacional de Salta (UNSa), Argentina; Facultad de Ingeniería, UNSa, Argentina; Singapore Centre for Environmental Life Sciences Engineering (SCELSE), Nanyang Technological University, Singapore
| | - Verónica Patricia Irazusta
- Instituto de Investigaciones para la Industria Química (INIQUI), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET) - Universidad Nacional de Salta (UNSa), Argentina; Facultad de Ciencias Naturales, UNSa, Argentina.
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2
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Ambaye TG, Hassani A, Vaccari M, Franzetti A, Prasad S, Formicola F, Rosatelli A, Rehman MZU, Mohanakrishna G, Ganachari SV, Aminabhavi TM, Rtimi S. Emerging technologies for the removal of pesticides from contaminated soils and their reuse in agriculture. CHEMOSPHERE 2024; 362:142433. [PMID: 38815812 DOI: 10.1016/j.chemosphere.2024.142433] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/15/2024] [Revised: 05/23/2024] [Accepted: 05/24/2024] [Indexed: 06/01/2024]
Abstract
Pesticides are becoming more prevalent in agriculture to protect crops and increase crop yields. However, nearly all pesticides used for this purpose reach non-target crops and remain as residues for extended periods. Contamination of soil by widespread pesticide use, as well as its toxicity to humans and other living organisms, is a global concern. This has prompted us to find solutions and develop alternative remediation technologies for sustainable management. This article reviews recent technological developments for remediating pesticides from contaminated soil, focusing on the following major points: (1) The application of various pesticide types and their properties, the sources of pesticides related to soil pollution, their transport and distribution, their fate, the impact on soil and human health, and the extrinsic and intrinsic factors that affect the remediation process are the main points of focus. (2) Sustainable pesticide degradation mechanisms and various emerging nano- and bioelectrochemical soil remediation technologies. (3) The feasible and long-term sustainable research and development approaches that are required for on-site pesticide removal from soils, as well as prospects for applying them directly in agricultural fields. In this critical analysis, we found that bioremediation technology has the potential for up to 90% pesticide removal from the soil. The complete removal of pesticides through a single biological treatment approach is still a challenging task; however, the combination of electrochemical oxidation and bioelectrochemical system approaches can achieve the complete removal of pesticides from soil. Further research is required to remove pesticides directly from soils in agricultural fields on a large-scale.
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Affiliation(s)
- Teklit Gebregiorgis Ambaye
- Department of Civil, Environmental, Architectural Engineering and Mathematics, University of Brescia, Via Branze 43, Brescia, 25123, Italy; Department of Environment and Resource Engineering, Technical University of Denmark, 2800, Lyngby, Denmark
| | - Aydin Hassani
- Department of Materials Science and Nanotechnology Engineering, Faculty of Engineering, Near East University, 99138 Nicosia, TRNC, Mersin 10, Turkey; Research Center for Science, Technology and Engineering (BILTEM), Near East University, 99138 Nicosia, TRNC, Mersin 10, Turkey
| | - Mentore Vaccari
- Department of Civil, Environmental, Architectural Engineering and Mathematics, University of Brescia, Via Branze 43, Brescia, 25123, Italy
| | - Andrea Franzetti
- Department of Earth and Environmental Sciences-DISAT, University of Milano-Bicocca, Piazza Della Scienza 1 Milano, 20126, Italy
| | - Shiv Prasad
- Division of Environment Science, ICAR-Indian Agricultural Research Institute New Delhi, 110012, India
| | - Francesca Formicola
- Department of Earth and Environmental Sciences-DISAT, University of Milano-Bicocca, Piazza Della Scienza 1 Milano, 20126, Italy
| | - Asia Rosatelli
- Department of Earth and Environmental Sciences-DISAT, University of Milano-Bicocca, Piazza Della Scienza 1 Milano, 20126, Italy
| | - Muhammad Zia Ur Rehman
- Institute of Soil and Environmental Sciences, University of Agriculture Faisalabad, 38040, Pakistan
| | - Gunda Mohanakrishna
- Center for Energy and Environment (CEE), School of Advanced Sciences, KLE Technological University, Hubballi, 580 031, India
| | - Sharanabasava V Ganachari
- Center for Energy and Environment (CEE), School of Advanced Sciences, KLE Technological University, Hubballi, 580 031, India
| | - Tejraj M Aminabhavi
- Center for Energy and Environment (CEE), School of Advanced Sciences, KLE Technological University, Hubballi, 580 031, India; Korea University, Seoul, South Korea.
| | - Sami Rtimi
- Global Institute for Water Environment and Health, 1210 Geneva, Switzerland.
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3
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Khani N, Noorkhajavi G, Reziabad RH, Rad AH, Ziavand M. Postbiotics as Potential Detoxification Tools for Mitigation of Pesticides. Probiotics Antimicrob Proteins 2024; 16:1427-1439. [PMID: 37934379 DOI: 10.1007/s12602-023-10184-1] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Accepted: 10/17/2023] [Indexed: 11/08/2023]
Abstract
Pesticides possess a pivotal role in the realm of agriculture and food manufacturing, as they effectively manage the proliferation of weeds, insects, plant pathogens, and microbial contaminations. They are valuable in some ways, but if misused, they can cause health issues like cancer, reproductive toxicity, neurological illnesses, and endocrine system disturbances. In this regard, practical methods for reducing pesticide residue in food should be used. For reducing pesticide residue in food processing, some strategies have been suggested. Recent research has been done on detoxification processes, including microorganisms like probiotics and their metabolites. The term "postbiotics" describes soluble substances, such as peptides, enzymes, teichoic acids, muropeptides generated from peptidoglycans, polysaccharides, proteins, and organic acids that are secreted by living bacteria or released after bacterial lysis. Due to their distinct chemical makeup, safe dosage guidelines, lengthy shelf lives, and presence of various signaling molecules that may have antioxidant, anti-inflammatory, anti-obesogenic, immunomodulatory, anti-hypertensive, and immunomodulatory effects, these postbiotics have attracted interest. They also can detoxify heavy metals, mycotoxins, and pesticides. Hydrolytic enzymes have been proposed as a potential mechanism for pesticide degradation. Postbiotics can also reduce reactive oxygen species production, enhance gastrointestinal barrier function, reduce inflammation, and modulate host xenobiotic metabolism. This review highlights pesticide residues in food products, definitions and safety aspect of postbiotics, as well as their biological role in detoxification of pesticides and the protective role of these compounds against the adverse effects of pesticides.
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Affiliation(s)
- Nader Khani
- Student Research Committee, Tabriz University of Medical Sciences, Tabriz, Iran
- Department of Food Science and Technology, Faculty of Nutrition & Food Sciences, Nutrition, Tabriz, Iran
| | - Ghasem Noorkhajavi
- Department of Medical Nanotechnology, Tabriz University of Medical Sciences, Tabriz, Iran Research Center, Tabriz University of Medical Sciences, Tabriz, Iran
| | - Reza Hazrati Reziabad
- Student Research Committee, Department of Food Science and Technology., National Nutrition and Food Technology Research Institute, Faculty of Nutrition Science and Food Technology, Shahid Beheshti University of Medical Sciences, Tehran, Iran
| | - Aziz Homayouni Rad
- Department of Food Science and Technology, Faculty of Nutrition & Food Sciences, Nutrition, Tabriz, Iran.
| | - Mohammadreza Ziavand
- Department of Food Science and Technology, Faculty of Nutrition & Food Sciences, Nutrition, Tabriz, Iran
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Sharma I, Sharma S, Sharma V, Singh AK, Sharma A, Kumar A, Singh J, Sharma A. PGPR-Enabled bioremediation of pesticide and heavy metal-contaminated soil: A review of recent advances and emerging challenges. CHEMOSPHERE 2024; 362:142678. [PMID: 38908452 DOI: 10.1016/j.chemosphere.2024.142678] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/29/2024] [Revised: 06/19/2024] [Accepted: 06/20/2024] [Indexed: 06/24/2024]
Abstract
The excessive usage of agrochemicals, including pesticides, along with various reckless human actions, has ensued discriminating prevalence of pesticides and heavy metals (HMs) in crop plants and the environment. The enhanced exposure to these chemicals is a menace to living organisms. The pesticides may get bioaccumulated in the food chain, thereby leading to several deteriorative changes in the ecosystem health and a rise in the cases of some serious human ailments including cancer. Further, both HMs and pesticides cause some major metabolic disturbances in plants, which include oxidative burst, osmotic alterations and reduced levels of photosynthesis, leading to a decline in plant productivity. Moreover, the synergistic interaction between pesticides and HMs has a more serious impact on human and ecosystem health. Various attempts have been made to explore eco-friendly and environmentally sustainable methods of improving plant health under HMs and/or pesticide stress. Among these methods, the employment of PGPR can be a suitable and effective strategy for managing these contaminants and providing a long-term remedy. Although, the application of PGPR alone can alleviate HM-induced phytotoxicities; however, several recent reports advocate using PGPR with other micro- and macro-organisms, biochar, chelating agents, organic acids, plant growth regulators, etc., to further improve their stress ameliorative potential. Further, some PGPR are also capable of assisting in the degradation of pesticides or their sequestration, reducing their harmful effects on plants and the environment. This present review attempts to present the current status of our understanding of PGPR's potential in the remediation of pesticides and HMs-contaminated soil for the researchers working in the area.
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Affiliation(s)
- Indu Sharma
- Department of Life Sciences, University Institute of Sciences, Sant Baba Bhag Singh University, Jalandhar, Punjab, 144030, India
| | - Shivika Sharma
- Department of Molecular Biology and Genetic Engineering, Lovely Professional University, Jalandhar, Punjab, India
| | - Vikas Sharma
- Department of Molecular Biology and Genetic Engineering, Lovely Professional University, Jalandhar, Punjab, India
| | - Anil Kumar Singh
- Department of Agriculture Sciences, University Institute of Sciences, Sant Baba Bhag Singh University, Jalandhar, Punjab, 144030, India
| | - Aksh Sharma
- Department of Life Sciences, University Institute of Sciences, Sant Baba Bhag Singh University, Jalandhar, Punjab, 144030, India
| | - Ajay Kumar
- Amity Institute of Biotechnology, Amity University, Noida, Uttar Pradesh, India
| | - Joginder Singh
- Department of Botany, Nagaland University, Hqrs. Lumami, Zunheboto, Nagaland, 798627, India.
| | - Ashutosh Sharma
- Faculty of Agricultural Sciences, DAV University, Jalandhar, Punjab, 144012, India.
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Bosu S, Rajamohan N, Al Salti S, Rajasimman M, Das P. Biodegradation of chlorpyrifos pollution from contaminated environment - A review on operating variables and mechanism. ENVIRONMENTAL RESEARCH 2024; 248:118212. [PMID: 38272293 DOI: 10.1016/j.envres.2024.118212] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/16/2023] [Revised: 11/12/2023] [Accepted: 01/13/2024] [Indexed: 01/27/2024]
Abstract
Chlorpyrifos (CPF) is a highly toxic phosphate-rich organic pesticide (OP), identified as an emerging contaminant and used extensively in agricultural production. CPF persistence in the environment and its potential health hazards has become increasingly concerning worldwide in recent years due to exponential rise in food demand. Biodegradation of chlorpyrifos by microbial cultures is a promising approach to reclaiming contaminated soil and aquatic environments. The purpose of this review is to summarize the current understanding of microbiological aspects of xenobiotic chlorpyrifos biodegradation, including microbial diversity, metabolic pathways, and factors that modulate it. In both aerobic and anaerobic environments, CPF is biochemically broken down by a broad spectrum of bacteria and fungi. Hydrolysis, dehalogenation, and oxidation of chlorpyrifos are all enzymatic reactions that lead to its degradation. Biodegradation rate and efficiency are strongly influenced by parametric variables such as co-substrates abundance, pH, temperature, and initial chlorpyrifos concentration. The review provides evidence that microbial biodegradation is a viable method for remediating chlorpyrifos-contaminated sites in a sustainable and safe manner.
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Affiliation(s)
- Subrajit Bosu
- Department of Chemical and Materials Engineering, University of Kentucky, Lexington, KY 40506, USA
| | - Natarajan Rajamohan
- Chemical Engineering Section, Faculty of Engineering, Sohar University, Sohar, P C-311, Oman.
| | - Shatha Al Salti
- Chemical Engineering Section, Faculty of Engineering, Sohar University, Sohar, P C-311, Oman
| | | | - Papiya Das
- Chemical Engineering Section, Faculty of Engineering, Sohar University, Sohar, P C-311, Oman
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Zhou L, Höfte M, Hennessy RC. Does regulation hold the key to optimizing lipopeptide production in Pseudomonas for biotechnology? Front Bioeng Biotechnol 2024; 12:1363183. [PMID: 38476965 PMCID: PMC10928948 DOI: 10.3389/fbioe.2024.1363183] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/29/2023] [Accepted: 02/12/2024] [Indexed: 03/14/2024] Open
Abstract
Lipopeptides (LPs) produced by Pseudomonas spp. are specialized metabolites with diverse structures and functions, including powerful biosurfactant and antimicrobial properties. Despite their enormous potential in environmental and industrial biotechnology, low yield and high production cost limit their practical use. While genome mining and functional genomics have identified a multitude of LP biosynthetic gene clusters, the regulatory mechanisms underlying their biosynthesis remain poorly understood. We propose that regulation holds the key to unlocking LP production in Pseudomonas for biotechnology. In this review, we summarize the structure and function of Pseudomonas-derived LPs and describe the molecular basis for their biosynthesis and regulation. We examine the global and specific regulator-driven mechanisms controlling LP synthesis including the influence of environmental signals. Understanding LP regulation is key to modulating production of these valuable compounds, both quantitatively and qualitatively, for industrial and environmental biotechnology.
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Affiliation(s)
- Lu Zhou
- Laboratory of Phytopathology, Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Ghent, Belgium
| | - Monica Höfte
- Laboratory of Phytopathology, Department of Plants and Crops, Faculty of Bioscience Engineering, Ghent University, Ghent, Belgium
| | - Rosanna C. Hennessy
- Department of Plant and Environmental Sciences, University of Copenhagen, Copenhagen, Denmark
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7
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Romantschuk M, Lahti-Leikas K, Kontro M, Galitskaya P, Talvenmäki H, Simpanen S, Allen JA, Sinkkonen A. Bioremediation of contaminated soil and groundwater by in situ biostimulation. Front Microbiol 2023; 14:1258148. [PMID: 38029190 PMCID: PMC10658714 DOI: 10.3389/fmicb.2023.1258148] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/13/2023] [Accepted: 09/22/2023] [Indexed: 12/01/2023] Open
Abstract
Bioremediation by in situ biostimulation is an attractive alternative to excavation of contaminated soil. Many in situ remediation methods have been tested with some success; however, due to highly variable results in realistic field conditions, they have not been implemented as widely as they might deserve. To ensure success, methods should be validated under site-analogous conditions before full scale use, which requires expertise and local knowledge by the implementers. The focus here is on indigenous microbial degraders and evaluation of their performance. Identifying and removing biodegradation bottlenecks for degradation of organic pollutants is essential. Limiting factors commonly include: lack of oxygen or alternative electron acceptors, low temperature, and lack of essential nutrients. Additional factors: the bioavailability of the contaminating compound, pH, distribution of the contaminant, and soil structure and moisture, and in some cases, lack of degradation potential which may be amended with bioaugmentation. Methods to remove these bottlenecks are discussed. Implementers should also be prepared to combine methods or use them in sequence. Chemical/physical means may be used to enhance biostimulation. The review also suggests tools for assessing sustainability, life cycle assessment, and risk assessment. To help entrepreneurs, decision makers, and methods developers in the future, we suggest founding a database for otherwise seldom reported unsuccessful interventions, as well as the potential for artificial intelligence (AI) to assist in site evaluation and decision-making.
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Affiliation(s)
- Martin Romantschuk
- Faculty of Biological and Environmental Sciences, University of Helsinki, Lahti, Finland
| | - Katariina Lahti-Leikas
- Faculty of Biological and Environmental Sciences, University of Helsinki, Lahti, Finland
| | - Merja Kontro
- Faculty of Biological and Environmental Sciences, University of Helsinki, Lahti, Finland
| | | | - Harri Talvenmäki
- Faculty of Biological and Environmental Sciences, University of Helsinki, Lahti, Finland
| | - Suvi Simpanen
- Faculty of Biological and Environmental Sciences, University of Helsinki, Lahti, Finland
| | - John A. Allen
- Faculty of Biological and Environmental Sciences, University of Helsinki, Lahti, Finland
| | - Aki Sinkkonen
- Natural Resources Institute Finland (Luke), Horticulture Technologies, Turku, Finland
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Patowary R, Jain P, Malakar C, Devi A. Biodegradation of carbofuran by Pseudomonas aeruginosa S07: biosurfactant production, plant growth promotion, and metal tolerance. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2023; 30:115185-115198. [PMID: 37878173 DOI: 10.1007/s11356-023-30466-z] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/17/2023] [Accepted: 10/10/2023] [Indexed: 10/26/2023]
Abstract
Pesticides are an indispensable part of modern farming as it aids in controlling pests and hence increase crop yield. But, unmanaged use of pesticides is a growing concern for safety and conservation of the environment. In the present study, a novel biosurfactant-producing bacterium, Pseudomonas aeruginosa S07, was utilized to degrade carbofuran pesticide, and it was obtained at 150 mg/L concentration; 89.2% degradation was achieved on the 5th day of incubation in in vitro culture condition. GC-MS (gas chromatography and mass spectrometry) and LC-MS (liquid chromatography and mass spectrometry) analyses revealed the presence of several degradation intermediates such as hydroxycarbofurnan, ketocarbofuran, and hydroxybenzofuran, in the degradation process. The bacterium was found to exhibit tolerance towards several heavy metals: Cu, Co, Zn, Ni, and Cd, where maximum and least tolerance were obtained against Co and Ni, respectively. Additionally, the bacterium also possesses plant growth-promoting activity showing positive results in nitrogen fixation, phosphate solubilising, ammonia production, and potassium solubilizing assays. Thus, from the study, it can be assumed that the bacterium can be useful in the production of bioformulation for remediation and rejuvenation of pesticide-contaminated sites in the coming days.
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Affiliation(s)
- Rupshikha Patowary
- Department of Biotechnology, The Assam Royal Global University, Betkuchi, Guwahati, Assam, 781035, India
- Environmental Chemistry Laboratory, Life Sciences Division, Institute of Advanced Study in Science and Technology, Paschim Boragaon, Guwahati, Assam, 781 035, India
| | - Prerna Jain
- Environmental Chemistry Laboratory, Life Sciences Division, Institute of Advanced Study in Science and Technology, Paschim Boragaon, Guwahati, Assam, 781 035, India
| | - Chandana Malakar
- Microbial Biotechnology and Protein Research Laboratory, Life Sciences Division, Institute of Advanced Study in Science and Technology, Paschim Boragaon, Guwahati, Assam, 781 035, India
| | - Arundhuti Devi
- Environmental Chemistry Laboratory, Life Sciences Division, Institute of Advanced Study in Science and Technology, Paschim Boragaon, Guwahati, Assam, 781 035, India.
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9
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Raj A, Dubey A, Malla MA, Kumar A. Pesticide pestilence: Global scenario and recent advances in detection and degradation methods. JOURNAL OF ENVIRONMENTAL MANAGEMENT 2023; 338:117680. [PMID: 37011532 DOI: 10.1016/j.jenvman.2023.117680] [Citation(s) in RCA: 17] [Impact Index Per Article: 8.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/13/2023] [Revised: 02/23/2023] [Accepted: 03/04/2023] [Indexed: 06/19/2023]
Abstract
Increased anthropogenic activities are confronted as the main cause for rising environmental and health concerns globally, presenting an indisputable threat to both environment and human well-being. Modern-day industrialization has given rise to a cascade of concurrent environmental and health challenges. The global human population is growing at an alarming rate, posing tremendous pressure on future food security, and healthy and environmentally sustainable diets for all. To feed all, the global food production needs to increase by 50% by 2050, but this increase has to occur from the limited arable land, and under the present-day climate variabilities. Pesticides have become an integral component of contemporary agricultural system, safeguarding crops from pests and diseases and their use must be reduce to fulfill the SDG (Sustainable Development Goals) agenda . However, their indiscriminate use, lengthy half-lives, and high persistence in soil and aquatic ecosystems have impacted global sustainability, overshot the planetary boundaries and damaged the pure sources of life with severe and negative impacts on environmental and human health. Here in this review, we have provided an overview of the background of pesticide use and pollution status and action strategies of top pesticide-using nations. Additionally, we have summarized biosensor-based methodologies for the rapid detection of pesticide residue. Finally, omics-based approaches and their role in pesticide mitigation and sustainable development have been discussed qualitatively. The main aim of this review is to provide the scientific facts for pesticide management and application and to provide a clean, green, and sustainable environment for future generations.
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Affiliation(s)
- Aman Raj
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar, 470003, M.P., India
| | - Anamika Dubey
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar, 470003, M.P., India
| | - Muneer Ahmad Malla
- Department of Zoology, Dr. Harisingh Gour University (A Central University), Sagar, 470003, M.P, India
| | - Ashwani Kumar
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar, 470003, M.P., India; Metagenomics and Secretomics Research Laboratory, Department of Botany, University of Allahabad (A Central University), Prayagraj, 211002, U.P., India.
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Malla MA, Dubey A, Kori RK, Sharma V, Kumar A, Yadav S, Kumari S. GC-MS based untargeted metabolomics reveals the metabolic response of earthworm (Eudrilus eugeniae) after chronic combinatorial exposure to three different pesticides. Sci Rep 2023; 13:8583. [PMID: 37237073 DOI: 10.1038/s41598-023-35225-1] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/20/2023] [Accepted: 05/15/2023] [Indexed: 05/28/2023] Open
Abstract
In this study GC-MS-based untargeted metabolomics was used to identify the metabolic response of earthworm; Eudrilus eugeniae exposed to sub-lethal concentrations of chlorpyrifos-CHL, cypermethrin-CYP, Glyphosate-GLY, and Combined-C (all three pesticides) at the concentrations of 3, 6, and 12 mg/kg. Principal component analysis of the obtained datasets revealed a clear distinction between the control and treatment groups. The mean weight of the worms in the treated groups decreased significantly (p < 0.05). Among the identified metabolites, oleic acid (~ 93.47%), lysine (~ 92.20%), glutamic acid (~ 91.81%), leucine (~ 90.20%), asparagine (~ 94.20%), methionine (~ 92.27%), malic acid (~ 93.37%), turanose (~ 95.04%), maltose (~ 92.36%), cholesta-3,5-diene (~ 86.11%), galactose (~ 93.20%), cholesterol (~ 91.56%), tocopherol (~ 85.09%), decreased significantly (p < 0.05), whereas myoinositol (~ 83%) and isoleucine (78.09%) increased significantly (p < 0.05) upon exposure to the CHL, CYP, GLY, and C. Overall, the findings suggest that earthworms might be a new entry point for the pesticides into the food chain. The present study highlights that metabolomics can be a reliable approach to understand the effect of different xenobiotics including pesticides on the metabolic response of earthworms.
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Affiliation(s)
- Muneer Ahmad Malla
- Department of Zoology, Dr. Harisingh Gour University (A Central University), Sagar, MP, 470003, India
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar, MP, 470003, India
| | - Anamika Dubey
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar, MP, 470003, India
| | - Rajeesh Kumar Kori
- IRMS, National Dope Testing Laboratory, Ministry of Youth and Sports, GOI, New Delhi, India
| | - Vandana Sharma
- Quality Control & Quality Assurance Division, CSIR-Indian Institute of Integrative Medicine, Canal Road, Jammu, 180 001, India
| | - Ashwani Kumar
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar, MP, 470003, India.
- Metagenomics and Secretomics Research Laboratory, Department of Botany, University of Allahabad (A Central University), Prayagraj, UP, 211002, India.
| | - Shweta Yadav
- Department of Zoology, Dr. Harisingh Gour University (A Central University), Sagar, MP, 470003, India
| | - Sheena Kumari
- Institute for Water and Wastewater Technology, Durban University of Technology, Durban, 4001, South Africa
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Fan X, Zhao M, Wen H, Zhang Y, Zhang Y, Zhang J, Liu X. Enhancement degradation efficiency of pyrethroid-degrading esterase (Est816) through rational design and its application in bioremediation. CHEMOSPHERE 2023; 319:138021. [PMID: 36731665 DOI: 10.1016/j.chemosphere.2023.138021] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/17/2022] [Revised: 01/12/2023] [Accepted: 01/29/2023] [Indexed: 06/18/2023]
Abstract
The pervasive use of pyrethroids is seriously hazardous to the environment and even human health. Enzymatic bioremediation is potentially a rapid and environmentally friendly technology to combat the pollution of pyrethroid pesticides. The hydrolysis of ester linkages is the initial and critical enzymatic step in microbial degradation pathways. Here, the versatile and thermostable esterase Est816 was cloned and its new function, pyrethroid-hydrolysis activity, was expanded. To further improve its pyrethroid-hydrolysis ability, Est816 was modified by rational design. After two rounds of mutation, the best-performing mutant, Est816A216V/K238N/M97V, was obtained, which could completely degrade 1 mg/L λ-cyhalothrin, cypermethrin, and deltamethrin within 20 min, and efficiently degrade fenvalerate, reaching over 80% conversion. Degradation activity analyses showed that three substitutions (A216V, K238 N and M97V) were beneficial for enhancing the activity of Est816. Enzymatic characterization showed that Est816A216V/K238N/M97V inherited broad substrate specificity and possessed excellent stability and adaptability over wide ranges of temperature and pH, which is essential for bioremediation in frequently changing conditions. Furthermore, Est816A216V/K238N/M97V had the best degradation effect on all four pyrethroid residues in Panax notoginseng root, with more than 87% conversion after 24 h. Pyrethroid residues in tea, cucumber, and soil were reduced by more than 76%, 80%, and 76%, respectively. Taken together, these findings highlight the great potential of Est816A216V/K238N/M97V in the bioremediation of pyrethroid-contaminated soil and agricultural products.
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Affiliation(s)
- Xinjiong Fan
- College & Hospital of Stomatology, Anhui Medical University, Key Lab. of Oral Diseases Research of Anhui Province, Hefei, 230032, China; School of Basic Medical Sciences, Anhui Medical University, 81 Meishan Rd, Hefei, 230032, Anhui, China
| | - Meng Zhao
- School of Basic Medical Sciences, Anhui Medical University, 81 Meishan Rd, Hefei, 230032, Anhui, China; Minhang Branch, Zhongshan Hospital, Fudan University,170 Xinsong Rd, Shanghai 200000, China
| | - Huamei Wen
- School of Basic Medical Sciences, Anhui Medical University, 81 Meishan Rd, Hefei, 230032, Anhui, China
| | - Yanyu Zhang
- School of Basic Medical Sciences, Anhui Medical University, 81 Meishan Rd, Hefei, 230032, Anhui, China
| | - Yixin Zhang
- School of Basic Medical Sciences, Anhui Medical University, 81 Meishan Rd, Hefei, 230032, Anhui, China
| | - Jing Zhang
- College & Hospital of Stomatology, Anhui Medical University, Key Lab. of Oral Diseases Research of Anhui Province, Hefei, 230032, China.
| | - Xiaolong Liu
- University of Science and Technology of China, Hefei, Anhui 230026, China.
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Aliverdi A. Biological, surface, and wetting behavior of bio-surfactants tank-mixed with trifloxysulfuron-sodium on Sorghum halepense. PEST MANAGEMENT SCIENCE 2023; 79:1578-1584. [PMID: 36592156 DOI: 10.1002/ps.7330] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/01/2022] [Revised: 12/14/2022] [Accepted: 01/02/2023] [Indexed: 06/17/2023]
Abstract
BACKGROUND There is a public interest in developing bio-surfactants due to their low toxicity and high biodegradation potential. However, their biological, surface, and behavior to use with agrochemicals has not been investigated. RESULTS Critical micelle concentrations (CMCs) for the synthetic surfactant dioctyl sodium sulfosuccinate (DOSS), the bio-surfactant rhamnolipid (RL), and the bio-surfactant surfactin (SF) were 1200, 50, and 50 mg L-1 , respectively. Based on the ability of the surfactants to reduce the surface tension of trifloxysulfuron-sodium spray solution at 0.25 to 1× CMC, they are ranked SF > RL > DOSS, while at 1.5 to 4× CMC, they are ranked SF = RL > DOSS. Without surfactant, trifloxysulfuron-sodium at 10.04 g ha-1 reduced johnsongrass growth up to 50% (ED50 ). At best, SF at 1 to 4× CMC halved ED50 . Unlike DOSS, which increased ED50 (12.89 g ha-1 ) due to a phytotoxic effect, SF and RL at 4× CMC decreased ED50 (5.19 and 6.50 g ha-1 , respectively) without a phytotoxic effect. A 5-μl droplet containing SF dried faster due to greater spread on the leaf surface than other surfactants. Although the wetted area of the leaf with the droplet containing RL was wider than that of DOSS, it took longer to dry. This observation contradicts the previous theory. CONCLUSION In terms of dosage, safety, and efficacy, the RL and SF were comparable to DOSS in other tank-mix with trifloxysulfuron-sodium. It seems that RL also works as a humectant, while SF likely works as a wax solubilisant. © 2023 Society of Chemical Industry.
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Affiliation(s)
- Akbar Aliverdi
- Department of Agronomy and Plant Breeding, Faculty of Agriculture, Bu-Ali Sina University, Hamedan, Iran
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13
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Malla MA, Dubey A, Kumar A, Yadav S, Kumari S. Modeling and optimization of chlorpyrifos and glyphosate biodegradation using RSM and ANN: Elucidating their degradation pathways by GC-MS based metabolomics. ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY 2023; 252:114628. [PMID: 36774796 DOI: 10.1016/j.ecoenv.2023.114628] [Citation(s) in RCA: 7] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/05/2022] [Revised: 01/28/2023] [Accepted: 02/06/2023] [Indexed: 06/18/2023]
Abstract
Ongoing and extensive use of pesticides negatively impact the environment and human health. Microbe-based remediation bears importance as it is an eco-friendly and cost-effective technique. The present study investigated chlorpyrifos (CHL) and glyphosate (GLY) degrading potential of Bacillus cereus AKAD 3-1, isolated from the soybean rhizosphere. Optimization and validation of different process variables were carried out by response surface methodology (RSM) and artificial neural network (ANN). Critical parameters which affect the degradation process are initial pesticide concentration, pH, and inoculum size. At optimum conditions, the bacterial strain demonstrated 94.52% and 83.58% removal of chlorpyrifos and glyphosate, respectively. Both Central-composite design (CCD-RSM) and ANN approaches proved to perform well in modeling and optimizing the growth conditions. The optimum ANN-GA model resulted in R2 ≥ 0.99 for chlorpyrifos and glyphosate, while in the case of RSM, the obtained R2 value was 0.96 and 0.95, respectively. Results indicated that the process variables significantly (p < 0.05) impact chlorpyrifos and glyphosate biodegradation. Moreover, the predicted RSM model had a "lack of fit p-value" of "0.8849" and "0.2502" for chlorpyrifos and glyphosate, respectively. GC-MS analysis revealed that the strain first converted chlorpyrifos into 3,5,6-trichloro pyridin-2-ol & O, O-diethyl O-hydrogen phosphorothiate. Later, these intermediate metabolites were broken and completely mineralized into non-toxic by-products. Similarly, glyphosate was first converted into 2-(methylamino) acetic acid and amino-oxyphosphonic acid, which were further mineralized without any toxic by-products. Taken together, the results of this study clarify the biodegradation pathways and highlights the promising potential of B. cereus AKAD 3-1 in the bioremediation of chlorpyrifos and glyphosate-polluted environments.
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Affiliation(s)
- Muneer Ahmad Malla
- Department of Zoology, Dr. Harisingh Gour University (A Central University), Sagar 470003, Madhya Pradesh, India; Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar 470003, Madhya Pradesh, India
| | - Anamika Dubey
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar 470003, Madhya Pradesh, India
| | - Ashwani Kumar
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar 470003, Madhya Pradesh, India; Metagenomics and Secretomics Research Laboratory, Department of Botany, University of Allahabad (A Central University), Prayagraj 211002, Uttar Pradesh, India.
| | - Shweta Yadav
- Department of Zoology, Dr. Harisingh Gour University (A Central University), Sagar 470003, Madhya Pradesh, India
| | - Sheena Kumari
- Institute for Water and Wastewater Technology, Durban University of Technology, Durban 4001, South Africa
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14
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Malla MA, Dubey A, Kumar A, Patil A, Ahmad S, Kothari R, Yadav S. Optimization and elucidation of organophosphorus and pyrethroid degradation pathways by a novel bacterial consortium C3 using RSM and GC-MS-based metabolomics. J Taiwan Inst Chem Eng 2023. [DOI: 10.1016/j.jtice.2023.104744] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 02/18/2023]
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15
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Devale A, Sawant R, Pardesi K, Perveen K, Khanam MNI, Shouche Y, Mujumdar S. Production and characterization of bioemulsifier by Parapedobacter indicus. Front Microbiol 2023; 14:1111135. [PMID: 36876100 PMCID: PMC9978354 DOI: 10.3389/fmicb.2023.1111135] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/29/2022] [Accepted: 01/09/2023] [Indexed: 02/18/2023] Open
Abstract
The current study evaluated Parapedobacter indicus MCC 2546 for its potential to produce a bioemulsifier (BE). Screening methods performed for BE production by P. indicus MCC 2546 showed good lipase activity, positive drop collapse test, and oil-spreading activity. Furthermore, it showed maximum emulsification activity (225 EU/ml) and emulsification index (E24 50%) at 37°C in Luria Bertani broth at 72 h with olive oil as a substrate. The optimal pH and NaCl concentration for maximum emulsification activity were 7 and 1%, respectively. P. indicus MCC 2546 lowered the surface tension of the culture medium from 59.65 to 50.42 ± 0.78 mN/m. BE produced was composed of 70% protein and 30% carbohydrate, which showed the protein-polysaccharide nature of the BE. Furthermore, Fourier transform infrared spectroscopy analysis confirmed the same. P. indicus MCC 2546 showed a catecholate type of siderophore production. This is the first report on BE and siderophore production by the genus Parapedobacter.
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Affiliation(s)
- Anushka Devale
- Department of Microbiology, P.E.S. Modern College of Arts, Science and Commerce (Autonomous), Pune, India
| | - Rupali Sawant
- Department of Microbiology, P.E.S. Modern College of Arts, Science and Commerce (Autonomous), Pune, India
| | - Karishma Pardesi
- Department of Microbiology, Savitribai Phule Pune University, Pune, India
| | - Kahkashan Perveen
- Department of Botany and Microbiology, College of Science, King Saud University, Riyadh, Saudi Arabia
| | - Mehrun NIsha Khanam
- School of Biological Sciences, College of Natural Sciences, Seoul National University, Seoul, Republic of Korea
| | - Yogesh Shouche
- School of Arts and Sciences, Azim Premji University, Bengaluru, India
| | - Shilpa Mujumdar
- Department of Microbiology, P.E.S. Modern College of Arts, Science and Commerce (Autonomous), Pune, India
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Valizadeh S, Enayatizamir N, Ghomsheh HN, Motamedi H, Moghadam BK. Characterization of the biosurfactant production and enzymatic potential of bacteria isolated from an oil-contaminated saline soil. INTERNATIONAL MICROBIOLOGY : THE OFFICIAL JOURNAL OF THE SPANISH SOCIETY FOR MICROBIOLOGY 2023:10.1007/s10123-022-00318-w. [PMID: 36680696 DOI: 10.1007/s10123-022-00318-w] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/16/2022] [Revised: 12/16/2022] [Accepted: 12/29/2022] [Indexed: 01/22/2023]
Abstract
Biosurfactants are amphiphilic compounds with extensive applications in oily contaminated environments to remove hydrocarbons. Moreover, enzymes such as laccase and manganese peroxidase are responsible for the oxidation of a variety of phenolic compounds and aromatic amines. Therefore, in the present study, bacteria with the potential to produce biosurfactants and enzymes (namely, laccase, manganese peroxidase, and endoglucanase carboxymethyl cellulose (CMCase)) were isolated from petroleum oil-contaminated soil. From 15 isolated bacteria, three isolates were selected as the best producers of biosurfactants according to the related tests, such as tests for surface tension reduction. These three bacteria indicated tolerance to a salinity test and were classified as resistant and very resistant. The isolates 3, 12, 13, and 14 showed positive results for the degradation of guaiacol, phenol red, and carboxymethylcellulose, as well as the decoloration of methylene blue by the creation of a clear halo around the bacterial colony. Upon the quantitation of the laccase and manganese peroxidase activities, 22.58 U/L and 21.81 U/L, respectively, were measured by isolate 13. Furthermore, CMCase activity was recorded with 0.057436 U/ml belonging to isolate 14. Bacterial strains with appreciable laccase, peroxidase, CMCase activity, and biosurfactant production potentials were identified through 16S rDNA sequence analysis as Bacillus sp. (isolate 3), Bacillus toyonensis (isolate 12), Bacillus cereus (isolate 13), and Bacillus tropicus (isolate 14), and their nucleotide sequences were deposited in the GenBank. The potentials for the industrial applicability of the biosurfactants and enzymes abound, and production needs to be optimized by the selected bacterial strains.
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Affiliation(s)
- Sara Valizadeh
- Department of Soil Science, Agricultural Sciences and Natural Resources University of Khuzestan, Mollasani, Iran
| | - Naeimeh Enayatizamir
- Department of Soil Science, Faculty of Agriculture, Shahid Chamran University of Ahvaz, Ahvaz, Iran.
| | - Habibolah Nadian Ghomsheh
- Department of Soil Science, Agricultural Sciences and Natural Resources University of Khuzestan, Mollasani, Iran
| | - Hossein Motamedi
- Department of Biology, Faculty of Science, Shahid Chamran University of Ahvaz, Ahvaz, Iran.,Biotechnology and Biological Science Research Center, Shahid Chamran University of Ahvaz, Ahvaz, Iran
| | - Bijan Khalili Moghadam
- Department of Soil Science, Agricultural Sciences and Natural Resources University of Khuzestan, Mollasani, Iran
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Karamchandani BM, Pawar AA, Pawar SS, Syed S, Mone NS, Dalvi SG, Rahman PKSM, Banat IM, Satpute SK. Biosurfactants' multifarious functional potential for sustainable agricultural practices. Front Bioeng Biotechnol 2022; 10:1047279. [PMID: 36578512 PMCID: PMC9792099 DOI: 10.3389/fbioe.2022.1047279] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/17/2022] [Accepted: 11/21/2022] [Indexed: 12/14/2022] Open
Abstract
Increasing food demand by the ever-growing population imposes an extra burden on the agricultural and food industries. Chemical-based pesticides, fungicides, fertilizers, and high-breeding crop varieties are typically employed to enhance crop productivity. Overexploitation of chemicals and their persistence in the environment, however, has detrimental effects on soil, water, and air which consequently disturb the food chain and the ecosystem. The lower aqueous solubility and higher hydrophobicity of agrochemicals, pesticides, metals, and hydrocarbons allow them to adhere to soil particles and, therefore, continue in the environment. Chemical pesticides, viz., organophosphate, organochlorine, and carbamate, are used regularly to protect agriculture produce. Hydrophobic pollutants strongly adhered to soil particles can be solubilized or desorbed through the usage of biosurfactant/s (BSs) or BS-producing and pesticide-degrading microorganisms. Among different types of BSs, rhamnolipids (RL), surfactin, mannosylerythritol lipids (MELs), and sophorolipids (SL) have been explored extensively due to their broad-spectrum antimicrobial activities against several phytopathogens. Different isoforms of lipopeptide, viz., iturin, fengycin, and surfactin, have also been reported against phytopathogens. The key role of BSs in designing and developing biopesticide formulations is to protect crops and our environment. Various functional properties such as wetting, spreading, penetration ability, and retention period are improved in surfactant-based formulations. This review emphasizes the use of diverse types of BSs and their source microorganisms to challenge phytopathogens. Extensive efforts seem to be focused on discovering the innovative antimicrobial potential of BSs to combat phytopathogens. We discussed the effectiveness of BSs in solubilizing pesticides to reduce their toxicity and contamination effects in the soil environment. Thus, we have shed some light on the use of BSs as an alternative to chemical pesticides and other agrochemicals as sparse literature discusses their interactions with pesticides. Life cycle assessment (LCA) and life cycle sustainability analysis (LCSA) quantifying their impact on human activities/interventions are also included. Nanoencapsulation of pesticide formulations is an innovative approach in minimizing pesticide doses and ultimately reducing their direct exposures to humans and animals. Some of the established big players and new entrants in the global BS market are providing promising solutions for agricultural practices. In conclusion, a better understanding of the role of BSs in pesticide solubilization and/or degradation by microorganisms represents a valuable approach to reducing their negative impact and maintaining sustainable agricultural practices.
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Affiliation(s)
| | - Ameya A. Pawar
- Department of Microbiology, Savitribai Phule Pune University, Pune, Maharashtra, India
| | - Sujit S. Pawar
- Department of Microbiology, Savitribai Phule Pune University, Pune, Maharashtra, India
| | - Sahil Syed
- Department of Microbiology, Savitribai Phule Pune University, Pune, Maharashtra, India
| | - Nishigandha S. Mone
- Department of Microbiology, Savitribai Phule Pune University, Pune, Maharashtra, India
| | - Sunil G. Dalvi
- Tissue Culture Section, Vasantdada Sugar Institute, Pune, India
| | - Pattanathu K. S. M. Rahman
- Discovery, School of Pharmacy and Biomolecular Sciences, Liverpool John Moores University, Liverpool, United Kingdom
| | - Ibrahim M. Banat
- School of Biomedical Sciences, Faculty of Life and Health Sciences, University of Ulster, Coleraine, United Kingdom,*Correspondence: Surekha K. Satpute, ; Ibrahim M. Banat,
| | - Surekha K. Satpute
- Department of Microbiology, Savitribai Phule Pune University, Pune, Maharashtra, India,*Correspondence: Surekha K. Satpute, ; Ibrahim M. Banat,
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18
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Raj A, Kumar A. Recent advances in assessment methods and mechanism of microbe-mediated chlorpyrifos remediation. ENVIRONMENTAL RESEARCH 2022; 214:114011. [PMID: 35985484 DOI: 10.1016/j.envres.2022.114011] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2022] [Revised: 07/25/2022] [Accepted: 07/26/2022] [Indexed: 06/15/2023]
Abstract
Chlorpyrifos (CP) is one of the Organophosphorus pesticides (OPs) primarily used in agriculture to safeguard crops from pests and diseases. The pervasive use of chlorpyrifos is hazardous to humans and the environment as it inhibits the receptor for acetylcholinesterase activity, leading to abnormalities linked to the central nervous system. Hence, there is an ardent need to develop an effective and sustainable approach to the on-site degradation of chlorpyrifos. The role of microbes in the remediation of pesticides is considered the most effective and eco-friendly approach, as they have strong degradative potential due to their gene and enzymes naturally adapted to these sites. Several reports have previously been published on exploring the role of microbes in the degradation of CP. However, detection of CP as an environmental contaminant is an essential prerequisite for developing an efficient microbial-mediated biodegradation method with less harmful intermediates. Most of the articles published to date discuss the fate and impact of CP in the environment along with its degradation mechanism but still fail to discuss the analytical portion. This review is focused on the latest developments in the field of bioremediation of CP along with its physicochemical properties, toxicity, fate, and conventional (UV-Visible spectrophotometer, FTIR, NMR, GC-MS, etc) and advanced detection methods (Biosensors and immunochromatography-based methods) from different environmental samples. Apart from it, this review explores the role of metagenomics, system biology, in-silico tools, and genetic engineering in facilitating the bioremediation of CP. One of the objectives of this review is to educate policymakers with scientific data that will enable the development of appropriate strategies to reduce pesticide exposure and the harmful health impacts on both Human and other environmental components. Moreover, this review provides up-to-date developments related to the sustainable remediation of CP.
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Affiliation(s)
- Aman Raj
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar, 470003, MP, India
| | - Ashwani Kumar
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (A Central University), Sagar, 470003, MP, India.
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Malla MA, Dubey A, Kumar A, Vennapu DR, Upadhyay N, Pradhan D, Pradhan RC, Yadav S. Process optimization of cypermethrin biodegradation by regression analysis and parametric modeling along with biochemical degradation pathway. ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH INTERNATIONAL 2022; 29:77418-77427. [PMID: 35678967 DOI: 10.1007/s11356-022-21191-0] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/25/2022] [Accepted: 05/26/2022] [Indexed: 06/15/2023]
Abstract
Pyrethroid pesticides are of great environmental and health concern with regard to neurotoxicity and ubiquitous occurrence. Here, we reported a new bacterial strain identified as Bacillus cereus AKAD 3-1 that degraded 88.1% of 50 mg/l of cypermethrin in an aqueous medium. The biodegradation of cypermethrin was optimized by CCD (central composite design) and validated by ANN-GA (artificial neural network-genetic algorithm). Both the approaches proved to possess good performance in modeling and optimizing the growth conditions. Results indicated that the process variables have a significant (< 0.0001) impact on cypermethrin biodegradation. Moreover, the predicted CCD model had a "lack of fit p-value" of "0.9975." The optimum CCD and ANN model had an R2 value of 0.9703 and 0.9907, indicating that the two models' experimental and predicted values are closely fitted. The isolate successfully converted cypermethrin to CO2 and phenol without producing any toxic metabolite. Finally, a degradation pathway was proposed with the intermediate compounds identified by GC-MS. The present study highlights an important potential application of strain AKAD 3-1 for the in situ bioremediation of cypermethrin-contaminated environments.
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Affiliation(s)
- Muneer Ahmad Malla
- Department of Zoology, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India
| | - Anamika Dubey
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India
| | - Ashwani Kumar
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India.
| | - Dushyanth Reddy Vennapu
- Department of Pharmaceutical Chemistry, KLE University College of Pharmacy, Belagavi, 590010, India
| | - Niraj Upadhyay
- Department of Chemistry, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India
| | - Dileswar Pradhan
- Department of Food Process Engineering, National Institute of Technology, Rourkela, India
| | - Rama Chandra Pradhan
- Department of Food Process Engineering, National Institute of Technology, Rourkela, India
| | - Shweta Yadav
- Department of Zoology, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India
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Kumar G, Lal S, Soni SK, Maurya SK, Shukla PK, Chaudhary P, Bhattacherjee AK, Garg N. Mechanism and kinetics of chlorpyrifos co-metabolism by using environment restoring microbes isolated from rhizosphere of horticultural crops under subtropics. Front Microbiol 2022; 13:891870. [PMID: 35958149 PMCID: PMC9360973 DOI: 10.3389/fmicb.2022.891870] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/08/2022] [Accepted: 07/04/2022] [Indexed: 11/13/2022] Open
Abstract
The indiscriminate use of organophosphate insecticide chlorpyrifos in agricultural crops causes significant soil and water pollution and poses a serious threat to the global community. In this study, a microbial consortium ERM C-1 containing bacterial strains Pseudomonas putida T7, Pseudomonas aeruginosa M2, Klebsiella pneumoniae M6, and a fungal strain Aspergillus terreus TF1 was developed for the effective degradation of chlorpyrifos. Results revealed that microbial strains were not only utilizing chlorpyrifos (500 mg L-1) but also coupled with plant growth-promoting characteristics and laccase production. PGP traits, that is, IAA (35.53, 45.53, 25.19, and 25.53 μg mL-1), HCN (19.85, 17.85, 12.18, and 9.85 μg mL-1), and ammonium (14.73, 16.73, 8.05, and 10.87 μg mL-1) production, and potassium (49.53, 66.72, 46.14, and 52.72 μg mL-1), phosphate (52.37, 63.89, 33.33, and 71.89 μg mL-1), and zinc (29.75, 49.75, 49.12, and 57.75 μg mL-1) solubilization tests were positive for microbial strains T7, M2, M6, and TF1, respectively. The laccase activity by ERM C-1 was estimated as 37.53, 57.16, and 87.57 enzyme U mL-1 after 5, 10, and 15 days of incubation, respectively. Chlorpyrifos degradation was associated with ERM C-1 and laccase activity, and the degree of enzyme activity was higher in the consortium than in individual strains. The biodegradation study with developed consortium ERM C-1 showed a decreased chlorpyrifos concentration from the 7th day of incubation (65.77% degradation) followed by complete disappearance (100% degradation) after the 30th day of incubation in the MS medium. First-order degradation kinetics with a linear model revealed a high k -day value and low t 1/2 value in ERM C-1. The results of HPLC and GC-MS analysis proved that consortium ERM C-1 was capable of completely removing chlorpyrifos by co-metabolism mechanism.
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Affiliation(s)
- Govind Kumar
- Indian Council of Agricultural Research (ICAR)–Central Institute for Subtropical Horticulture, Lucknow, Uttar Pradesh, India
| | - Shatrohan Lal
- Indian Council of Agricultural Research (ICAR)–Central Institute for Subtropical Horticulture, Lucknow, Uttar Pradesh, India
| | - Sumit K. Soni
- Indian Council of Agricultural Research (ICAR)–Central Institute for Subtropical Horticulture, Lucknow, Uttar Pradesh, India
| | - Shailendra K. Maurya
- Indian Council of Agricultural Research (ICAR)–Central Institute for Subtropical Horticulture, Lucknow, Uttar Pradesh, India
| | - Pradeep K. Shukla
- Indian Council of Agricultural Research (ICAR)–Central Institute for Subtropical Horticulture, Lucknow, Uttar Pradesh, India
| | - Parul Chaudhary
- Department of Animal Biotechnology, Indian Council of Agricultural Research (ICAR)–National Dairy Research Institute, Karnal, Haryana, India
| | - A. K. Bhattacherjee
- Indian Council of Agricultural Research (ICAR)–Central Institute for Subtropical Horticulture, Lucknow, Uttar Pradesh, India
| | - Neelima Garg
- Indian Council of Agricultural Research (ICAR)–Central Institute for Subtropical Horticulture, Lucknow, Uttar Pradesh, India
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Malla MA, Dubey A, Kumar A, Yadav S. Metagenomic analysis displays the potential predictive biodegradation pathways of the persistent pesticides in agricultural soil with a long record of pesticide usage. Microbiol Res 2022; 261:127081. [DOI: 10.1016/j.micres.2022.127081] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/05/2021] [Revised: 05/13/2022] [Accepted: 05/24/2022] [Indexed: 12/29/2022]
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Eras-Muñoz E, Farré A, Sánchez A, Font X, Gea T. Microbial biosurfactants: a review of recent environmental applications. Bioengineered 2022; 13:12365-12391. [PMID: 35674010 PMCID: PMC9275870 DOI: 10.1080/21655979.2022.2074621] [Citation(s) in RCA: 50] [Impact Index Per Article: 16.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/10/2022] Open
Abstract
Microbial biosurfactants are low-molecular-weight surface-active compounds of high industrial interest owing to their chemical properties and stability under several environmental conditions. The chemistry of a biosurfactant and its production cost are defined by the selection of the producer microorganism, type of substrate, and purification strategy. Recently, biosurfactants have been applied to solve or contribute to solving some environmental problems, with this being their main field of application. The most referenced studies are based on the bioremediation of contaminated soils with recalcitrant pollutants, such as hydrocarbons or heavy metals. In the case of heavy metals, biosurfactants function as chelating agents owing to their binding capacity. However, the mechanism by which biosurfactants typically act in an environmental field is focused on their ability to reduce the surface tension, thus facilitating the emulsification and solubilization of certain pollutants (in-situ biostimulation and/or bioaugmentation). Moreover, despite the low toxicity of biosurfactants, they can also act as biocidal agents at certain doses, mainly at higher concentrations than their critical micellar concentration. More recently, biosurfactant production using alternative substrates, such as several types of organic waste and solid-state fermentation, has increased its applicability and research interest in a circular economy context. In this review, the most recent research publications on the use of biosurfactants in environmental applications as an alternative to conventional chemical surfactants are summarized and analyzed. Novel strategies using biosurfactants as agricultural and biocidal agents are also presented in this paper.
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Affiliation(s)
- Estefanía Eras-Muñoz
- Composting Research Group (GICOM), Department of Chemical, Biological and Environmental Engineering, Escola d'Enginyeria, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain
| | - Abel Farré
- Composting Research Group (GICOM), Department of Chemical, Biological and Environmental Engineering, Escola d'Enginyeria, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain
| | - Antoni Sánchez
- Composting Research Group (GICOM), Department of Chemical, Biological and Environmental Engineering, Escola d'Enginyeria, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain
| | - Xavier Font
- Composting Research Group (GICOM), Department of Chemical, Biological and Environmental Engineering, Escola d'Enginyeria, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain
| | - Teresa Gea
- Composting Research Group (GICOM), Department of Chemical, Biological and Environmental Engineering, Escola d'Enginyeria, Universitat Autònoma de Barcelona, Cerdanyola del Vallès, Spain
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Malla MA, Dubey A, Raj A, Kumar A, Upadhyay N, Yadav S. Emerging frontiers in microbe-mediated pesticide remediation: Unveiling role of omics and In silico approaches in engineered environment. ENVIRONMENTAL POLLUTION (BARKING, ESSEX : 1987) 2022; 299:118851. [PMID: 35085655 DOI: 10.1016/j.envpol.2022.118851] [Citation(s) in RCA: 26] [Impact Index Per Article: 8.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/09/2021] [Revised: 01/09/2022] [Accepted: 01/11/2022] [Indexed: 06/14/2023]
Abstract
The overuse of pesticides for augmenting agriculture productivity always comes at the cost of environment, biodiversity, and human health and has put the land, water, and environmental footprints under severe threat throughout the globe. Underpinning and maximizing the microbiome functions in pesticide-contaminated environments has become a prerequisite for a sustainable environment and resilient agriculture. It is imperative to elucidate the metabolic network of the microbial communities and environmental variables at the contaminated site to predict the best strategy for remediation and soil microbe-pesticide interactions. High throughput next-generation sequencing and in silico analysis allow us to identify and discern the members and characteristics of core microbiomes at the contaminated site. Integration of modern high throughput multi-omics investigations and informatics pipelines provide novel approaches and pathways to capitalize on the core microbiomes for enhancing environmental functioning and mitigation. The role of eco-genomics tools in visualising the microbial network, taxonomy, functional potential, and environmental variables in contaminated habitats is discussed in this review. The integrated role of the potential microbe identification as individual or consortia, mechanistic approach for pesticide degradation, identification of responsible enzymes/genes, and in silico approach is emphasized for the prospects of the area.
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Affiliation(s)
- Muneer Ahmad Malla
- Department of Zoology, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India; Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India
| | - Anamika Dubey
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India
| | - Aman Raj
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India
| | - Ashwani Kumar
- Metagenomics and Secretomics Research Laboratory, Department of Botany, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India.
| | - Niraj Upadhyay
- Department of Chemistry, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India
| | - Shweta Yadav
- Department of Zoology, Dr. Harisingh Gour University (Central University), Sagar, 470003, MP, India
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