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Guo Z, Wang J, Jing T, Fu L. Investigating the interpretability of schizophrenia EEG mechanism through a 3DCNN-based hidden layer features aggregation framework. COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE 2024; 247:108105. [PMID: 38447316 DOI: 10.1016/j.cmpb.2024.108105] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/25/2023] [Revised: 02/07/2024] [Accepted: 02/26/2024] [Indexed: 03/08/2024]
Abstract
BACKGROUND AND OBJECTIVE Electroencephalogram (EEG) signals record brain activity, with growing interest in quantifying neural activity through complexity analysis as a potential biological marker for schizophrenia. Presently, EEG complexity analysis primarily relies on manual feature extraction, which is subjective and yields varied findings in studies involving schizophrenia and healthy controls. METHODS This study aims to leverage deep learning methods for enhanced EEG complexity exploration, aiding early schizophrenia screening and diagnosis. Our proposed approach utilizes a three-dimensional Convolutional Neural Network (3DCNN) to extract enhanced data features for early schizophrenia identification and subsequent complexity analysis. Leveraging the spatiotemporal capabilities of 3DCNN, we extract advanced latent features and employ knowledge distillation to reintegrate these features into the original channels, creating feature-enhanced data. RESULTS We employ a 10-fold cross-validation strategy, achieving the average accuracies of 99.46% and 98.06% in subject-dependent experiments on Dataset 1(14SZ and 14HC) and Dataset 2 (45SZ and 39HC). The average accuracy for subject-independent is 96.04% and 92.67% on both datasets. Feature extraction and classification are conducted on both the re-aggregated data and the original data. Our results demonstrate that re-aggregated data exhibit superior classification performance and a more stable training process after feature extraction. In the complexity analysis of re-aggregated data, we observe lower entropy features in schizophrenic patients compared to healthy controls, with more pronounced differences in the temporal and frontal lobes. Analyzing Katz's Fractal Dimension (KFD) across three sub-bands of lobe channels reveals the lowest α band KFD value in schizophrenia patients. CONCLUSIONS This emphasizes the ability of our method to enhance the discrimination and interpretability in schizophrenia detection and analysis. Our approach enhances the potential for EEG-based schizophrenia diagnosis by leveraging deep learning, offering superior discrimination capabilities and richer interpretive insights.
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Affiliation(s)
- Zhifen Guo
- College of Information Science and Engineering, Northeastern University, Shenyang, China.
| | - Jiao Wang
- College of Information Science and Engineering, Northeastern University, Shenyang, China.
| | - Tianyu Jing
- College of Information Science and Engineering, Northeastern University, Shenyang, China.
| | - Longyue Fu
- College of Information Science and Engineering, Northeastern University, Shenyang, China.
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2
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Czoch A, Kaposzta Z, Mukli P, Stylianou O, Eke A, Racz FS. Resting-state fractal brain connectivity is associated with impaired cognitive performance in healthy aging. GeroScience 2024; 46:473-489. [PMID: 37458934 PMCID: PMC10828136 DOI: 10.1007/s11357-023-00836-z] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/21/2023] [Accepted: 05/20/2023] [Indexed: 01/31/2024] Open
Abstract
Aging affects cognitive functions even in the absence of ongoing pathologies. The neurophysiological basis of age-related cognitive decline (CD), however, is not completely understood. Alterations in both functional brain connectivity and in the fractal scaling of neuronal dynamics have been linked to aging and cognitive performance. Recently, fractal connectivity (FrC) has been proposed - combining the two concepts - for capturing long-term interactions among brain regions. FrC was shown to be influenced by increased mental workload; however, no prior studies investigated how resting-state FrC relates to cognitive performance and plausible CD in healthy aging. We recruited 19 healthy elderly (HE) and 24 young control (YC) participants, who underwent resting-state electroencephalography (EEG) measurements and comprehensive cognitive evaluation using 7 tests of the Cambridge Neurophysiological Test Automated Battery. FrC networks were reconstructed from EEG data using the recently introduced multiple-resampling cross-spectral analysis (MRCSA). Elderly individuals could be characterized with increased response latency and reduced performance in 4-4 tasks, respectively, with both reaction time and accuracy being affected in two tasks. Auto- and cross-spectral exponents - characterizing regional fractal dynamics and FrC, respectively, - were found reduced in HE when compared to YC over most of the cortex. Additionally, fractal scaling of frontoparietal connections expressed an inverse relationship with task performance in visual memory and sustained attention domains in elderly, but not in young individuals. Our results confirm that the fractal nature of brain connectivity - as captured by MRCSA - is affected in healthy aging. Furthermore, FrC appears as a sensitive neurophysiological marker of age-related CD.
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Affiliation(s)
- Akos Czoch
- Department of Physiology, Semmelweis University, Budapest, Hungary
| | - Zalan Kaposzta
- Department of Physiology, Semmelweis University, Budapest, Hungary
| | - Peter Mukli
- Department of Physiology, Semmelweis University, Budapest, Hungary
- Oklahoma Center for Geroscience and Healthy Brain Aging, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA
- Vascular Cognitive Impairment and Neurodegeneration Program, Department of Neurosurgery, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA
- International Training Program in Geroscience, Doctoral School of Basic and Translational Medicine/Department of Public Health, Semmelweis University, Budapest, Hungary
| | - Orestis Stylianou
- Department of Physiology, Semmelweis University, Budapest, Hungary
- Institute of Translational Medicine, Semmelweis University, Budapest, Hungary
- Berlin Institute of Health at Charité, University Hospital Berlin, Berlin, Germany
- Department of Neurology With Experimental Neurology, Charité-University Hospital Berlin, Corporate Member of Freie Universität Berlin and Humboldt Universität Zu Berlin, Berlin, Germany
| | - Andras Eke
- Department of Physiology, Semmelweis University, Budapest, Hungary
- Department of Radiology and Biomedical Imaging, Yale University School of Medicine, New Haven, CT, USA
| | - Frigyes Samuel Racz
- Department of Physiology, Semmelweis University, Budapest, Hungary.
- Department of Neurology, Dell Medical School, The University of Texas at Austin, Austin, TX, USA.
- Mulva Clinic for the Neurosciences, Dell Medical School, The University of Texas at Austin, Austin, TX, USA.
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Kaposzta Z, Czoch A, Mukli P, Stylianou O, Liu DH, Eke A, Racz FS. Fingerprints of decreased cognitive performance on fractal connectivity dynamics in healthy aging. GeroScience 2024; 46:713-736. [PMID: 38117421 PMCID: PMC10828149 DOI: 10.1007/s11357-023-01022-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/25/2023] [Accepted: 11/19/2023] [Indexed: 12/21/2023] Open
Abstract
Analysis of brain functional connectivity (FC) could provide insight in how and why cognitive functions decline even in healthy aging (HA). Despite FC being established as fluctuating over time even in the resting state (RS), dynamic functional connectivity (DFC) studies involving healthy elderly individuals and assessing how these patterns relate to cognitive performance are yet scarce. In our recent study we showed that fractal temporal scaling of functional connections in RS is not only reduced in HA, but also predicts increased response latency and reduced task solving accuracy. However, in that work we did not address changes in the dynamics of fractal connectivity (FrC) strength itself and its plausible relationship with mental capabilities. Therefore, here we analyzed RS electroencephalography recordings of the same subject cohort as previously, consisting of 24 young and 19 healthy elderly individuals, who also completed 7 different cognitive tasks after data collection. Dynamic fractal connectivity (dFrC) analysis was carried out via sliding-window detrended cross-correlation analysis (DCCA). A machine learning method based on recursive feature elimination was employed to select the subset of connections most discriminative between the two age groups, identifying 56 connections that allowed for classifying participants with an accuracy surpassing 92%. Mean of DCCA was found generally increased, while temporal variability of FrC decreased in the elderly when compared to the young group. Finally, dFrC indices expressed an elaborate pattern of associations-assessed via Spearman correlation-with cognitive performance scores in both groups, linking fractal connectivity strength and variance to increased response latency and reduced accuracy in the elderly population. Our results provide further support for the relevance of FrC dynamics in understanding age-related cognitive decline and might help to identify potential targets for future intervention strategies.
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Affiliation(s)
- Zalan Kaposzta
- Department of Physiology, Semmelweis University, 37-47 Tuzolto Street, Budapest, 1094, Hungary
| | - Akos Czoch
- Department of Physiology, Semmelweis University, 37-47 Tuzolto Street, Budapest, 1094, Hungary
| | - Peter Mukli
- Department of Physiology, Semmelweis University, 37-47 Tuzolto Street, Budapest, 1094, Hungary
- Oklahoma Center for Geroscience and Healthy Brain Aging, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA
- Vascular Cognitive Impairment and Neurodegeneration Program, Department of Neurosurgery, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA
- International Training Program in Geroscience, Doctoral School of Basic and Translational Medicine/Department of Public Health, Semmelweis University, Budapest, Hungary
| | - Orestis Stylianou
- Department of Physiology, Semmelweis University, 37-47 Tuzolto Street, Budapest, 1094, Hungary
- Institute of Translational Medicine, Semmelweis University, Budapest, Hungary
- Berlin Institute of Health at Charité, University Hospital Berlin, Charitéplatz 1, 10117, Berlin, Germany
- Department of Neurology with Experimental Neurology, Charité-University Hospital Berlin, Corporate Member of Freie Universität Berlin and Humboldt Universität zu Berlin, Berlin, Germany
| | - Deland Hu Liu
- Chandra Department of Electrical and Computer Engineering, Cockrell School of Engineering, The University of Texas at Austin, Austin, TX, USA
| | - Andras Eke
- Department of Physiology, Semmelweis University, 37-47 Tuzolto Street, Budapest, 1094, Hungary
- Department of Radiology and Biomedical Imaging, Yale University School of Medicine, New Haven, CT, USA
| | - Frigyes Samuel Racz
- Department of Physiology, Semmelweis University, 37-47 Tuzolto Street, Budapest, 1094, Hungary.
- Department of Neurology, Dell Medical School, The University of Texas at Austin, 1601 Trinity St, Austin, TX, 78712, USA.
- Mulva Clinic for the Neurosciences, Dell Medical School, The University of Texas at Austin, Austin, TX, USA.
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Soria C, Arroyo Y, Torres AM, Redondo MÁ, Basar C, Mateo J. Method for Classifying Schizophrenia Patients Based on Machine Learning. J Clin Med 2023; 12:4375. [PMID: 37445410 DOI: 10.3390/jcm12134375] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/29/2023] [Revised: 06/21/2023] [Accepted: 06/27/2023] [Indexed: 07/15/2023] Open
Abstract
Schizophrenia is a chronic and severe mental disorder that affects individuals in various ways, particularly in their ability to perceive, process, and respond to stimuli. This condition has a significant impact on a considerable number of individuals. Consequently, the study, analysis, and characterization of this pathology are of paramount importance. Electroencephalography (EEG) is frequently utilized in the diagnostic assessment of various brain disorders due to its non-intrusiveness, excellent resolution and ease of placement. However, the manual analysis of electroencephalogram (EEG) recordings can be a complex and time-consuming task for healthcare professionals. Therefore, the automated analysis of EEG recordings can help alleviate the burden on doctors and provide valuable insights to support clinical diagnosis. Many studies are working along these lines. In this research paper, the authors propose a machine learning (ML) method based on the eXtreme Gradient Boosting (XGB) algorithm for analyzing EEG signals. The study compares the performance of the proposed XGB-based approach with four other supervised ML systems. According to the results, the proposed XGB-based method demonstrates superior performance, with an AUC value of 0.94 and an accuracy value of 0.94, surpassing the other compared methods. The implemented system exhibits high accuracy and robustness in accurately classifying schizophrenia patients based on EEG recordings. This method holds the potential to be implemented as a valuable complementary tool for clinical use in hospitals, supporting clinicians in their clinical diagnosis of schizophrenia.
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Affiliation(s)
- Carmen Soria
- Institute of Technology, University of Castilla-La Mancha, 16071 Cuenca, Spain
- Clinical Neurophysiology Service, Virgen de la Luz Hospital, 16002 Cuenca, Spain
| | - Yoel Arroyo
- Faculty of Social Sciences and Information Technology, University of Castilla-La Mancha, 45600 Talavera de la Reina, Spain
| | - Ana María Torres
- Institute of Technology, University of Castilla-La Mancha, 16071 Cuenca, Spain
| | - Miguel Ángel Redondo
- School of Informatics, University of Castilla-La Mancha, 13071 Ciudad Real, Spain
| | - Christoph Basar
- Faculty of Human and Health Sciences, University of Bremen, 28359 Bremen, Germany
| | - Jorge Mateo
- Institute of Technology, University of Castilla-La Mancha, 16071 Cuenca, Spain
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Khare SK, Bajaj V, Acharya UR. SchizoNET: a robust and accurate Margenau-Hill time-frequency distribution based deep neural network model for schizophrenia detection using EEG signals. Physiol Meas 2023; 44. [PMID: 36787641 DOI: 10.1088/1361-6579/acbc06] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/12/2022] [Accepted: 02/14/2023] [Indexed: 02/16/2023]
Abstract
Objective.Schizophrenia (SZ) is a severe chronic illness characterized by delusions, cognitive dysfunctions, and hallucinations that impact feelings, behaviour, and thinking. Timely detection and treatment of SZ are necessary to avoid long-term consequences. Electroencephalogram (EEG) signals are one form of a biomarker that can reveal hidden changes in the brain during SZ. However, the EEG signals are non-stationary in nature with low amplitude. Therefore, extracting the hidden information from the EEG signals is challenging.Approach.The time-frequency domain is crucial for the automatic detection of SZ. Therefore, this paper presents the SchizoNET model combining the Margenau-Hill time-frequency distribution (MH-TFD) and convolutional neural network (CNN). The instantaneous information of EEG signals is captured in the time-frequency domain using MH-TFD. The time-frequency amplitude is converted to two-dimensional plots and fed to the developed CNN model.Results.The SchizoNET model is developed using three different validation techniques, including holdout, five-fold cross-validation, and ten-fold cross-validation techniques using three separate public SZ datasets (Dataset 1, 2, and 3). The proposed model achieved an accuracy of 97.4%, 99.74%, and 96.35% on Dataset 1 (adolescents: 45 SZ and 39 HC subjects), Dataset 2 (adults: 14 SZ and 14 HC subjects), and Dataset 3 (adults: 49 SZ and 32 HC subjects), respectively. We have also evaluated six performance parameters and the area under the curve to evaluate the performance of our developed model.Significance.The SchizoNET is robust, effective, and accurate, as it performed better than the state-of-the-art techniques. To the best of our knowledge, this is the first work to explore three publicly available EEG datasets for the automated detection of SZ. Our SchizoNET model can help neurologists detect the SZ in various scenarios.
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Affiliation(s)
- Smith K Khare
- Electrical and Computer Engineering Department, Aarhus University, Denmark
| | - Varun Bajaj
- Discipline of Electronics and Communication Engineering, Indian Institute of Information Technology, Design, and Manufacturing (IIITDM) Jabalpur, India
| | - U Rajendra Acharya
- School of Mathematics, Physics, and Computing, University of Southern Queensland, Springfield, Australia.,Department of Biomedical Engineering, School of Science and Technology, University of Social Sciences, Singapore.,Department of Biomedical Informatics and Medical Engineering, Asia University, Taiwan.,Distinguished Professor, Kumamoto University, Japan.,Adjunct Professor, University of Malaya, Malaysia
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6
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Agarwal M, Singhal A. Fusion of pattern-based and statistical features for Schizophrenia detection from EEG signals. Med Eng Phys 2023; 112:103949. [PMID: 36842772 DOI: 10.1016/j.medengphy.2023.103949] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/29/2022] [Revised: 12/01/2022] [Accepted: 01/03/2023] [Indexed: 01/06/2023]
Abstract
Schizophrenia (SZ) is a chronic disorder affecting the functioning of the brain. It can lead to irrational behaviour amongst the patients suffering from this disease. A low-cost diagnostic needs to be developed for SZ so that timely treatment can be provided to the patients. In this work, we propose an accurate and easy-to-implement system to detect SZ using electroencephalogram (EEG) signals. The signal is divided into sub-band components by a Fourier-based technique that can be implemented in real-time using fast Fourier transform. Thereafter, statistical features are computed from these components. Further, look ahead pattern (LAP) is developed as a feature to capture local variations in the EEG signal. The fusion of these two distinct schemes enables a thorough examination of EEG signals. Kruskal-Wallis test is utilized for the selection of significant features. Various machine learning classifiers are employed and the proposed framework achieves 98.62% and 99.24% accuracy in identifying SZ cases, considering two distinct datasets, using boosted trees classifier. This method provides a promising candidate for widespread deployment in efficient real-time systems for SZ detection.
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Affiliation(s)
- Megha Agarwal
- Department of Electronics & Communication Engineering, Jaypee Institute of Information Technology, Noida, India.
| | - Amit Singhal
- Department of Electronics & Communication Engineering, Netaji Subhas University of Technology, Delhi, India.
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7
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Hou JY, Wu JR, Chen YB, Xu D, Liu S, Shang DD, Fan GW, Cui YL. Systematic identification of the interventional mechanism of Qingfei Xiaoyan Wan (QFXYW) in treatment of the cytokine storm in acute lung injury using transcriptomics-based system pharmacological analyses. PHARMACEUTICAL BIOLOGY 2022; 60:743-754. [PMID: 35357989 PMCID: PMC8979529 DOI: 10.1080/13880209.2022.2055090] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/15/2023]
Abstract
CONTEXT Acute lung injury (ALI) is a complex, severe inflammation disease with high mortality, and there is no specific and effective treatment for ALI. Qingfei Xiaoyan Wan (QFXYW) has been widely used to treat lung-related diseases for centuries. OBJECTIVE This study evaluates the potential effects and elucidates the therapeutic mechanism of QFXYW against LPS induced ALI in mice. MATERIALS AND METHODS BALB/c Mice in each group were first orally administered medicines (0.9% saline solution for the control group, 0.5 mg/kg Dexamethasone, or 1.3, 2.6, 5.2 g/kg QFXYW), after 4 h, the groups were injected LPS (1.0 mg/kg) to induce ALI, then the same medicines were administered repeatedly. The transcriptomics-based system pharmacological analyses were applied to screen the hub genes, RT-PCR, ELISA, and protein array assay was applied to verify the predicted hub genes and key pathways. RESULTS QFXYW significantly decreased the number of leukocytes from (6.34 ± 0.51) × 105/mL to (4.01 ± 0.11) × 105/mL, accompanied by the neutrophil from (1.41 ± 0.19) × 105/mL to (0.77 ± 0.10) × 105/mL in bronchoalveolar lavage fluid (BALF). Based on Degree of node connection (Degree) and BottleNeck (BN), important parameters of network topology, the protein-protein interaction (PPI) network screened hub genes, including IL-6, TNF-α, CCL2, TLR2, CXCL1, and MMP-9. The results of RT-PCR, ELISA, and protein chip assay revealed that QFXYW could effectively inhibit ALI via multiple key targets and the cytokine-cytokine signalling pathway. CONCLUSIONS This study showed that QFXYW decreased the number of leukocytes and neutrophils by attenuating inflammatory response, which provides an important basis for the use of QFXYW in the treatment of ALI.
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Affiliation(s)
- Jing-Yi Hou
- State Key Laboratory of Component-based Chinese Medicine, Tianjin University of Traditional Chinese Medicine, Tianjin, People’s Republic of China
| | - Jia-Rong Wu
- State Key Laboratory of Component-based Chinese Medicine, Tianjin University of Traditional Chinese Medicine, Tianjin, People’s Republic of China
| | - Yi-Bing Chen
- Tianjin Key Laboratory of Transformation of Traditional Chinese Medicine, First Teaching Hospital of Tianjin University of Traditional Chinese Medicine, Tianjin, China
| | - Dong Xu
- State Key Laboratory of Component-based Chinese Medicine, Tianjin University of Traditional Chinese Medicine, Tianjin, People’s Republic of China
| | - Shu Liu
- Tianjin Zhongxin Pharmaceutical Group Corporation Limited Darentang Pharmaceutical Factory, Tianjin, China
| | - Dan-dan Shang
- Tianjin Zhongxin Pharmaceutical Group Corporation Limited Darentang Pharmaceutical Factory, Tianjin, China
| | - Guan-Wei Fan
- Tianjin Key Laboratory of Transformation of Traditional Chinese Medicine, First Teaching Hospital of Tianjin University of Traditional Chinese Medicine, Tianjin, China
- Guan-Wei Fan Tianjin Key Laboratory of Transformation of Traditional Chinese Medicine, First Teaching Hospital of Tianjin University of Traditional Chinese Medicine, Tianjin, China
| | - Yuan-Lu Cui
- State Key Laboratory of Component-based Chinese Medicine, Tianjin University of Traditional Chinese Medicine, Tianjin, People’s Republic of China
- CONTACT Yuan-Lu Cui State Key Laboratory of Component-based Chinese Medicine, Tianjin University of Traditional Chinese Medicine, Tianjin, People’s Republic of China
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8
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Parija S, Sahani M, Bisoi R, Dash PK. Autoencoder-based improved deep learning approach for schizophrenic EEG signal classification. Pattern Anal Appl 2022. [DOI: 10.1007/s10044-022-01107-x] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 10/14/2022]
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9
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Venegas-Aravena P, Cordaro EG, Laroze D. Natural Fractals as Irreversible Disorder: Entropy Approach from Cracks in the Semi Brittle-Ductile Lithosphere and Generalization. ENTROPY (BASEL, SWITZERLAND) 2022; 24:1337. [PMID: 37420357 DOI: 10.3390/e24101337] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/23/2022] [Revised: 09/12/2022] [Accepted: 09/13/2022] [Indexed: 07/09/2023]
Abstract
The seismo-electromagnetic theory describes the growth of fractally distributed cracks within the lithosphere that generate the emission of magnetic anomalies prior to large earthquakes. One of the main physical properties of this theory is their consistency regarding the second law of thermodynamics. That is, the crack generation of the lithosphere corresponds to the manifestation of an irreversible process evolving from one steady state to another. Nevertheless, there is still not a proper thermodynamic description of lithospheric crack generation. That is why this work presents the derivation of the entropy changes generated by the lithospheric cracking. It is found that the growth of the fractal cracks increases the entropy prior impending earthquakes. As fractality is observed across different topics, our results are generalized by using the Onsager's coefficient for any system characterized by fractal volumes. It is found that the growth of fractality in nature corresponds to an irreversible process.
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Affiliation(s)
- Patricio Venegas-Aravena
- Department of Structural and Geotechnical Engineering, School of Engineering, Pontificia Universidad Católica de Chile, Vicuña Mackenna 4860, Macul, Santiago 8331150, Chile
| | - Enrique G Cordaro
- Observatorios de Radiación Cósmica y Geomagnetismo, Departamento de Física, FCFM, Universidad de Chile, Casilla 487-3, Santiago 8370415, Chile
- Facultad de Ingeniería, Universidad Autónoma de Chile, Pedro de Valdivia 425, Santiago 7500912, Chile
| | - David Laroze
- Instituto de Alta Investigación, CEDENNA, Universidad de Tarapacá, Casilla 7D, Arica 1000000, Chile
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E DO, V MS, S LV, E SY. Fractal Structure of Brain Electrical Activity of Patients With Mental Disorders. Front Physiol 2022; 13:905318. [PMID: 35923231 PMCID: PMC9340582 DOI: 10.3389/fphys.2022.905318] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/26/2022] [Accepted: 06/23/2022] [Indexed: 11/19/2022] Open
Abstract
This work was aimed at a comparative analysis of the degree of multifractality of electroencephalographic time series obtained from a group of healthy subjects and from patients with mental disorders. We analyzed long-term records of patients with paranoid schizophrenia and patients with depression. To evaluate the properties of multifractal scaling of various electroencephalographic time series, the method of maximum modulus of the wavelet transform and multifractal analysis of fluctuations without a trend were used. The stability of the width and position of the singularity spectrum for each of the test groups was revealed, and a relationship was established between the correlation and anticorrelation dynamics of successive values of the electroencephalographic time series and the type of mental disorders. It was shown that the main differences between the multifractal properties of brain activity in normal and pathological conditions lie in the different width of the multifractality spectrum and its location associated with the correlated or anticorrelated dynamics of the values of successive time series. It was found that the schizophrenia group is characterized by a greater degree of multifractality compared to the depression group. Thus, the degree of multifractality can be included in a set of tests for differential diagnosis and research of mental disorders.
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Affiliation(s)
- Dick O. E
- Laboratory of Physiology of Reception, Pavlov Institute of Physiology of Russian Academy of Science, St. Petersburg, Russia
- *Correspondence: Dick O. E,
| | - Murav’eva S. V
- Laboratory of Vision Physiology, Pavlov Institute of Physiology of Russian Academy of Science, St. Petersburg, Russia
| | - Lebedev V. S
- Laboratory of Vision Physiology, Pavlov Institute of Physiology of Russian Academy of Science, St. Petersburg, Russia
| | - Shelepin Yu. E
- Laboratory of Vision Physiology, Pavlov Institute of Physiology of Russian Academy of Science, St. Petersburg, Russia
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11
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Kipiński L, Maciejowski A, Małyszczak K, Pilecki W. High-frequency changes in single-trial visual evoked potentials for unattended stimuli in chronic schizophrenia. J Neurosci Methods 2022; 377:109626. [DOI: 10.1016/j.jneumeth.2022.109626] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/15/2021] [Revised: 04/26/2022] [Accepted: 05/18/2022] [Indexed: 10/18/2022]
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12
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Ye H, Li G, Sheng X, Zhu X. Phase-amplitude coupling between low-frequency scalp EEG and high-frequency intracranial EEG during working memory task. J Neural Eng 2022; 19. [PMID: 35441594 DOI: 10.1088/1741-2552/ac63e9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 12/15/2021] [Accepted: 04/04/2022] [Indexed: 11/12/2022]
Abstract
Objective. Revealing the relationship between simultaneous scalp electroencephalography (EEG) and intracranial electroencephalography (iEEG) is of great importance for both neuroscientific research and translational applications. However, whether prominent iEEG features in the high-gamma band can be reflected by scalp EEG is largely unknown. To address this, we investigated the phase-amplitude coupling (PAC) phenomenon between the low-frequency band of scalp EEG and the high-gamma band of iEEG.Approach. We analyzed a simultaneous iEEG and scalp EEG dataset acquired under a verbal working memory paradigm from nine epilepsy subjects. The PAC values between pairs of scalp EEG channel and identified iEEG channel were explored. After identifying the frequency combinations and electrode locations that generated the most significant PAC values, we compared the PAC values of different task periods (encoding, maintenance, and retrieval) and memory loads.Main results. We demonstrated that the amplitude of high-gamma activities in the entorhinal cortex, hippocampus, and amygdala was correlated to the delta or theta phase at scalp locations such as Cz and Pz. In particular, the frequency bin that generated the maximum PAC value centered at 3.16-3.84 Hz for the phase and 50-85 Hz for the amplitude. Moreover, our results showed that PAC values for the retrieval period were significantly higher than those of the encoding and maintenance periods, and the PAC was also influenced by the memory load.Significance. This is the first human simultaneous iEEG and scalp EEG study demonstrating that the amplitude of iEEG high-gamma components is associated with the phase of low-frequency components in scalp EEG. These findings enhance our understanding of multiscale neural interactions during working memory, and meanwhile, provide a new perspective to estimate intracranial high-frequency features with non-invasive neural recordings.
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Affiliation(s)
- Huanpeng Ye
- State Key Laboratory of Mechanical System and Vibration, School of Mechanical Engineering, Shanghai Jiao Tong University, Shanghai, People's Republic of China
| | - Guangye Li
- State Key Laboratory of Mechanical System and Vibration, School of Mechanical Engineering, Shanghai Jiao Tong University, Shanghai, People's Republic of China
| | - Xinjun Sheng
- State Key Laboratory of Mechanical System and Vibration, School of Mechanical Engineering, Shanghai Jiao Tong University, Shanghai, People's Republic of China
| | - Xiangyang Zhu
- State Key Laboratory of Mechanical System and Vibration, School of Mechanical Engineering, Shanghai Jiao Tong University, Shanghai, People's Republic of China
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13
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Multifractality in the Movement System When Adapting to Arm Cranking in Wheelchair Athletes, Able-Bodied Athletes, and Untrained People. FRACTAL AND FRACTIONAL 2022. [DOI: 10.3390/fractalfract6040176] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 12/07/2022]
Abstract
Complexity science has helped neuroscientists shed new light on brain-body coordination during movement performance and motor learning in humans. A critical intuition based on monofractal approaches has been a fractal-like coordination in the movement system, more marked in motor-skilled people. Here we aimed to show that heterogeneity in scaling exponents of movements series, literally multifractality, may reflect a special kind of interactions spanning multiple temporal scales at once, which can be grasped by a focus-based multifractal detrended fluctuation analysis. We analyzed multifractality in the variability structure of a 10-min arm cranking movement series repeated as 3 sets a day for 3 days, comparatively with their linearized (phase-randomized) surrogate series in sedentary (SED) untrained people, wheelchair athletes (WATH), and able-bodied athletes (ATH). Arm cranking exercise was chosen to minimize external variations, which tend to interfere with internal origin of variability. Participants were asked to maintain a regular effort and torque output served as the performance variable. Our first hypothesis suggests greater multiscale interactions in trained (WATH, ATH) versus untrained (SED) people, reflected in a wider range of scaling exponents characterizing movement series, providing the system with significant robustness. As a second hypothesis, we addressed a possible advantage in WATH over ATH due to greater motor skills in upper-limbs. Multifractal metrics in original and surrogate series showed ubiquitous, but different, multifractal behaviors in expert (ATH and WATH indistinctively) versus novice (SED) people. Experts exhibited high multifractality during the first execution of the task; then multifractality dropped in following repetitions. We suggest an exacerbated robustness of the movement system coordination in experts when discovering the task. Once task novelty has worn off, poor external sources of variability and limited risks of task failure have been identified, which is reflected in the narrower range of scale interactions, possibly as an energy cost effective adaptation. Multifractal corollaries of movement adaptation may be helpful in sport training and motor rehabilitation programs.
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Kaposzta Z, Czoch A, Stylianou O, Kim K, Mukli P, Eke A, Racz FS. Real-Time Algorithm for Detrended Cross-Correlation Analysis of Long-Range Coupled Processes. Front Physiol 2022; 13:817268. [PMID: 35360238 PMCID: PMC8963246 DOI: 10.3389/fphys.2022.817268] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Accepted: 02/07/2022] [Indexed: 11/13/2022] Open
Abstract
Assessing power-law cross-correlations between a pair - or among a set - of processes is of great significance in diverse fields of analyses ranging from neuroscience to financial markets. In most cases such analyses are computationally expensive and thus carried out offline once the entire signal is obtained. However, many applications - such as mental state monitoring or financial forecasting - call for fast algorithms capable of estimating scale-free coupling in real time. Detrended cross-correlation analysis (DCCA), a generalization of the detrended fluctuation analysis (DFA) to the bivariate domain, has been introduced as a method designed to quantify power-law cross-correlations between a pair of non-stationary signals. Later, in analogy with the Pearson cross-correlation coefficient, DCCA was adapted to the detrended cross-correlation coefficient (DCCC), however as of now no online algorithms were provided for either of these analysis techniques. Here we introduce a new formula for obtaining the scaling functions in real time for DCCA. Moreover, the formula can be generalized via matrix notation to obtain the scaling relationship between not only a pair of signals, but also all possible pairs among a set of signals at the same time. This includes parallel estimation of the DFA scaling function of each individual process as well, thus allowing also for real-time acquisition of DCCC. The proposed algorithm matches its offline variants in precision, while being substantially more efficient in terms of execution time. We demonstrate that the method can be utilized for mental state monitoring on multi-channel electroencephalographic recordings obtained in eyes-closed and eyes-open resting conditions.
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Affiliation(s)
- Zalan Kaposzta
- Department of Physiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary
| | - Akos Czoch
- Department of Physiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary
| | - Orestis Stylianou
- Department of Physiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary
- Institute of Translational Medicine, Semmelweis University, Budapest, Hungary
| | - Keumbi Kim
- Department of Physiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary
| | - Peter Mukli
- Department of Physiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary
- Oklahoma Center for Geroscience and Healthy Brain Aging, Department of Biochemistry and Molecular Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, United States
| | - Andras Eke
- Department of Physiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary
- Department of Radiology and Biomedical Imaging, Yale University School of Medicine, New Haven, CT, United States
| | - Frigyes Samuel Racz
- Department of Physiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary
- Department of Neurology, Dell Medical School, University of Texas at Austin, Austin, TX, United States
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15
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Zhu Y, Zhu G, Li B, Yang Y, Zheng X, Xu Q, Li X. Abnormality of Functional Connections in the Resting State Brains of Schizophrenics. Front Hum Neurosci 2022; 16:799881. [PMID: 35355584 PMCID: PMC8959982 DOI: 10.3389/fnhum.2022.799881] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/22/2021] [Accepted: 01/10/2022] [Indexed: 11/13/2022] Open
Abstract
To explore the change of brain connectivity in schizophrenics (SCZ), the resting-state EEG source functional connections of SCZ and healthy control (HC) were investigated in this paper. Different band single-layer networks, multilayer networks, and improved multilayer networks were constructed and their topological attributes were extracted. The topological attributes of SCZ and HC were automatically distinguished using ensemble learning methods called Ensemble Learning based on Trees and Soft voting method, and the effectiveness of different network construction methods was compared based on the classification accuracy. The results showed that the classification accuracy was 89.38% for α band network, 82.5% for multilayer network, and 86.88% for improved multilayer network. Comparing patients with SCZ to those with Alzheimer’s disease (AD), the classification accuracy of improved multilayer network was the highest, which was 88.12%. The power spectrum in the α band of SCZ was significantly lower than HC, whereas there was no significant difference between SCZ and AD. This indicated that the improved multilayer network can effectively distinguish SCZ and other groups not only when their power spectrum was significantly different. The results also suggested that the improved multilayer topological attributes were regarded as biological markers in the clinical diagnosis of patients with schizophrenia and even other mental disorders.
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Affiliation(s)
- Yan Zhu
- College of Medical Instruments, Shanghai University of Medicine & Health Sciences, Shanghai, China
- College of Medical Instrument and Food Engineering, University of Shanghai for Science and Technology, Shanghai, China
| | - Geng Zhu
- College of Medical Instruments, Shanghai University of Medicine & Health Sciences, Shanghai, China
| | - Bin Li
- Shanghai Yangpu District Mental Health Center, Shanghai, China
| | - Yueqi Yang
- College of Medical Instruments, Shanghai University of Medicine & Health Sciences, Shanghai, China
- College of Medical Instrument and Food Engineering, University of Shanghai for Science and Technology, Shanghai, China
| | - Xiaohan Zheng
- College of Medical Instruments, Shanghai University of Medicine & Health Sciences, Shanghai, China
- College of Medical Instrument and Food Engineering, University of Shanghai for Science and Technology, Shanghai, China
| | - Qi Xu
- College of Medical Instruments, Shanghai University of Medicine & Health Sciences, Shanghai, China
- College of Medical Instrument and Food Engineering, University of Shanghai for Science and Technology, Shanghai, China
| | - Xiaoou Li
- College of Medical Instruments, Shanghai University of Medicine & Health Sciences, Shanghai, China
- College of Medical Instrument and Food Engineering, University of Shanghai for Science and Technology, Shanghai, China
- *Correspondence: Xiaoou Li,
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16
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Racz FS, Czoch A, Kaposzta Z, Stylianou O, Mukli P, Eke A. Multiple-Resampling Cross-Spectral Analysis: An Unbiased Tool for Estimating Fractal Connectivity With an Application to Neurophysiological Signals. Front Physiol 2022; 13:817239. [PMID: 35321422 PMCID: PMC8936508 DOI: 10.3389/fphys.2022.817239] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/17/2021] [Accepted: 01/17/2022] [Indexed: 11/16/2022] Open
Abstract
Investigating scale-free (i.e., fractal) functional connectivity in the brain has recently attracted increasing attention. Although numerous methods have been developed to assess the fractal nature of functional coupling, these typically ignore that neurophysiological signals are assemblies of broadband, arrhythmic activities as well as oscillatory activities at characteristic frequencies such as the alpha waves. While contribution of such rhythmic components may bias estimates of fractal connectivity, they are also likely to represent neural activity and coupling emerging from distinct mechanisms. Irregular-resampling auto-spectral analysis (IRASA) was recently introduced as a tool to separate fractal and oscillatory components in the power spectrum of neurophysiological signals by statistically summarizing the power spectra obtained when resampling the original signal by several non-integer factors. Here we introduce multiple-resampling cross-spectral analysis (MRCSA) as an extension of IRASA from the univariate to the bivariate case, namely, to separate the fractal component of the cross-spectrum between two simultaneously recorded neural signals by applying the same principle. MRCSA does not only provide a theoretically unbiased estimate of the fractal cross-spectrum (and thus its spectral exponent) but also allows for computing the proportion of scale-free coupling between brain regions. As a demonstration, we apply MRCSA to human electroencephalographic recordings obtained in a word generation paradigm. We show that the cross-spectral exponent as well as the proportion of fractal coupling increases almost uniformly over the cortex during the rest-task transition, likely reflecting neural desynchronization. Our results indicate that MRCSA can be a valuable tool for scale-free connectivity studies in characterizing various cognitive states, while it also can be generalized to other applications outside the field of neuroscience.
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Affiliation(s)
- Frigyes Samuel Racz
- Department of Physiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary
- Department of Neurology, Dell Medical School, The University of Texas at Austin, Austin, TX, United States
- *Correspondence: Frigyes Samuel Racz,
| | - Akos Czoch
- Department of Physiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary
| | - Zalan Kaposzta
- Department of Physiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary
| | - Orestis Stylianou
- Department of Physiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary
- Institute of Translational Medicine, Semmelweis University, Budapest, Hungary
| | - Peter Mukli
- Department of Physiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary
- Oklahoma Center for Geroscience and Healthy Brain Aging, Department of Biochemistry & Molecular Biology, The University of Oklahoma Health Sciences Center, Oklahoma City, OK, United States
| | - Andras Eke
- Department of Physiology, Faculty of Medicine, Semmelweis University, Budapest, Hungary
- Department of Radiology & Biomedical Imaging, School of Medicine, Yale University, New Haven, CT, United States
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17
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Zueva MV, Di Ieva A, Pyankova SD. Editorial: Fractals in the diagnosis and treatment of the retina and brain diseases. FRONTIERS IN NETWORK PHYSIOLOGY 2022; 2:1054439. [PMID: 36926074 PMCID: PMC10013046 DOI: 10.3389/fnetp.2022.1054439] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/26/2022] [Accepted: 10/03/2022] [Indexed: 03/18/2023]
Affiliation(s)
- Marina V Zueva
- Department of Clinical Physiology of Vision, Helmholtz National Medical Research Center of Eye Diseases, Moscow, Russia
| | - Antonio Di Ieva
- Computational NeuroSurgery (CNS) Lab, Macquarie Medical School, Macquarie University, Sydney, NSW, Australia
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Alamian G, Lajnef T, Pascarella A, Lina JM, Knight L, Walters J, Singh KD, Jerbi K. Altered Brain Criticality in Schizophrenia: New Insights From Magnetoencephalography. Front Neural Circuits 2022; 16:630621. [PMID: 35418839 PMCID: PMC8995790 DOI: 10.3389/fncir.2022.630621] [Citation(s) in RCA: 8] [Impact Index Per Article: 4.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/18/2020] [Accepted: 03/03/2022] [Indexed: 12/13/2022] Open
Abstract
Schizophrenia has a complex etiology and symptomatology that is difficult to untangle. After decades of research, important advancements toward a central biomarker are still lacking. One of the missing pieces is a better understanding of how non-linear neural dynamics are altered in this patient population. In this study, the resting-state neuromagnetic signals of schizophrenia patients and healthy controls were analyzed in the framework of criticality. When biological systems like the brain are in a state of criticality, they are thought to be functioning at maximum efficiency (e.g., optimal communication and storage of information) and with maximum adaptability to incoming information. Here, we assessed the self-similarity and multifractality of resting-state brain signals recorded with magnetoencephalography in patients with schizophrenia patients and in matched controls. Schizophrenia patients had similar, although attenuated, patterns of self-similarity and multifractality values. Statistical tests showed that patients had higher values of self-similarity than controls in fronto-temporal regions, indicative of more regularity and memory in the signal. In contrast, patients had less multifractality than controls in the parietal and occipital regions, indicative of less diverse singularities and reduced variability in the signal. In addition, supervised machine-learning, based on logistic regression, successfully discriminated the two groups using measures of self-similarity and multifractality as features. Our results provide new insights into the baseline cognitive functioning of schizophrenia patients by identifying key alterations of criticality properties in their resting-state brain data.
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Affiliation(s)
- Golnoush Alamian
- CoCo Lab, Department of Psychology, Université de Montréal, Montréal, QC, Canada
| | - Tarek Lajnef
- CoCo Lab, Department of Psychology, Université de Montréal, Montréal, QC, Canada
| | - Annalisa Pascarella
- Institute for Applied Mathematics Mauro Picone, National Research Council, Roma, Italy
| | - Jean-Marc Lina
- Department of Electrical Engineering, École de Technologie Supérieure, Montréal, QC, Canada.,Mathematical Research Center, Université de Montréal, Montréal, QC, Canada.,Centre UNIQUE, Union Neurosciences et Intelligence Artificielle - Québec, Montréal, QC, Canada
| | - Laura Knight
- CUBRIC, School of Psychology, College of Biomedical and Life Sciences, Cardiff University, Cardiff, United Kingdom
| | - James Walters
- Division of Psychological Medicine and Clinical Neurosciences, MRC Centre for Neuropsychiatric Genetics and Genomics, School of Medicine, College of Biomedical and Life Sciences, Cardiff University, Cardiff, United Kingdom
| | - Krish D Singh
- CUBRIC, School of Psychology, College of Biomedical and Life Sciences, Cardiff University, Cardiff, United Kingdom
| | - Karim Jerbi
- CoCo Lab, Department of Psychology, Université de Montréal, Montréal, QC, Canada.,Centre UNIQUE, Union Neurosciences et Intelligence Artificielle - Québec, Montréal, QC, Canada.,MEG Center, Université de Montréal, Montréal, QC, Canada
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19
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Stylianou O, Racz FS, Kim K, Kaposzta Z, Czoch A, Yabluchanskiy A, Eke A, Mukli P. Multifractal Functional Connectivity Analysis of Electroencephalogram Reveals Reorganization of Brain Networks in a Visual Pattern Recognition Paradigm. Front Hum Neurosci 2021; 15:740225. [PMID: 34733145 PMCID: PMC8558231 DOI: 10.3389/fnhum.2021.740225] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/12/2021] [Accepted: 09/23/2021] [Indexed: 11/13/2022] Open
Abstract
The human brain consists of anatomically distant neuronal assemblies that are interconnected via a myriad of synapses. This anatomical network provides the neurophysiological wiring framework for functional connectivity (FC), which is essential for higher-order brain functions. While several studies have explored the scale-specific FC, the scale-free (i.e., multifractal) aspect of brain connectivity remains largely neglected. Here we examined the brain reorganization during a visual pattern recognition paradigm, using bivariate focus-based multifractal (BFMF) analysis. For this study, 58 young, healthy volunteers were recruited. Before the task, 3-3 min of resting EEG was recorded in eyes-closed (EC) and eyes-open (EO) states, respectively. The subsequent part of the measurement protocol consisted of 30 visual pattern recognition trials of 3 difficulty levels graded as Easy, Medium, and Hard. Multifractal FC was estimated with BFMF analysis of preprocessed EEG signals yielding two generalized Hurst exponent-based multifractal connectivity endpoint parameters, H(2) and ΔH 15; with the former indicating the long-term cross-correlation between two brain regions, while the latter captures the degree of multifractality of their functional coupling. Accordingly, H(2) and ΔH 15 networks were constructed for every participant and state, and they were characterized by their weighted local and global node degrees. Then, we investigated the between- and within-state variability of multifractal FC, as well as the relationship between global node degree and task performance captured in average success rate and reaction time. Multifractal FC increased when visual pattern recognition was administered with no differences regarding difficulty level. The observed regional heterogeneity was greater for ΔH 15 networks compared to H(2) networks. These results show that reorganization of scale-free coupled dynamics takes place during visual pattern recognition independent of difficulty level. Additionally, the observed regional variability illustrates that multifractal FC is region-specific both during rest and task. Our findings indicate that investigating multifractal FC under various conditions - such as mental workload in healthy and potentially in diseased populations - is a promising direction for future research.
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Affiliation(s)
- Orestis Stylianou
- Department of Physiology, Semmelweis University, Budapest, Hungary,Institute of Translational Medicine, Semmelweis University, Budapest, Hungary
| | | | - Keumbi Kim
- Department of Physiology, Semmelweis University, Budapest, Hungary
| | - Zalan Kaposzta
- Department of Physiology, Semmelweis University, Budapest, Hungary
| | - Akos Czoch
- Department of Physiology, Semmelweis University, Budapest, Hungary
| | - Andriy Yabluchanskiy
- Vascular Cognitive Impairment and Neurodegeneration Program, Department of Biochemistry and Molecular Biology, Oklahoma Center for Geroscience and Healthy Brain Aging, The University of Oklahoma Health Sciences Center, Oklahoma City, OK, United States,The Peggy and Charles Stephenson Cancer Center, The University of Oklahoma Health Sciences Center, Oklahoma City, OK, United States,Department of Health Promotion Sciences, College of Public Health, The University of Oklahoma Health Sciences Center, Oklahoma City, OK, United States
| | - Andras Eke
- Department of Physiology, Semmelweis University, Budapest, Hungary,Department of Radiology and Biomedical Imaging, Yale University School of Medicine, New Haven, CT, United States,Andras Eke,
| | - Peter Mukli
- Department of Physiology, Semmelweis University, Budapest, Hungary,Vascular Cognitive Impairment and Neurodegeneration Program, Department of Biochemistry and Molecular Biology, Oklahoma Center for Geroscience and Healthy Brain Aging, The University of Oklahoma Health Sciences Center, Oklahoma City, OK, United States,*Correspondence: Peter Mukli,
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20
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Mukli P, Csipo T, Lipecz A, Stylianou O, Racz FS, Owens CD, Perry JW, Tarantini S, Sorond FA, Kellawan JM, Purebl G, Yang Y, Sonntag WE, Csiszar A, Ungvari ZI, Yabluchanskiy A. Sleep deprivation alters task-related changes in functional connectivity of the frontal cortex: A near-infrared spectroscopy study. Brain Behav 2021; 11:e02135. [PMID: 34156165 PMCID: PMC8413792 DOI: 10.1002/brb3.2135] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 11/03/2020] [Revised: 03/12/2021] [Accepted: 03/19/2021] [Indexed: 01/05/2023] Open
Abstract
Sleep deprivation (SD) is known to be associated with decreased cognitive performance; however, the underlying mechanisms are poorly understood. As interactions between distinct brain regions depend on mental state, functional brain networks established by these connections typically show a reorganization during task. Hence, analysis of functional connectivity (FC) could reveal the task-related change in the examined frontal brain networks. Our objective was to assess the impact of SD on static FC in the prefrontal and motor cortices and find whether changes in FC correlate with changes in neuropsychological scores. Healthy young male individuals (n = 10, 27.6 ± 3.7 years of age) participated in the study. A battery of tests from the Cambridge Neuropsychological Test Automated Battery (CANTAB) and 48 channel functional near-infrared spectroscopy (fNIRS) measurements were performed before and after 24 hr of SD. Network metrics were obtained by graph theoretical analysis using the fNIRS records in resting state and during finger-tapping sessions. During task, SD resulted in a significantly smaller decrease in the number and strength of functional connections (characterizing FC) in the frontal cortex. Changes in the global connection strengths correlated with decreased performance in the paired association learning test. These results indicate a global impact of SD on functional brain networks in the frontal lobes.
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Affiliation(s)
- Peter Mukli
- Oklahoma Center for Geroscience and Healthy Brain AgingDepartment of Biochemistry and Molecular BiologyUniversity of Oklahoma Health Sciences CenterOklahoma CityOKUSA
- Department of PhysiologyFaculty of MedicineSemmelweis UniversityBudapestHungary
- International Training Program in GeroscienceDoctoral School of Basic and Translational Medicine/Department of Public HealthSemmelweis UniversityBudapestHungary
| | - Tamas Csipo
- Oklahoma Center for Geroscience and Healthy Brain AgingDepartment of Biochemistry and Molecular BiologyUniversity of Oklahoma Health Sciences CenterOklahoma CityOKUSA
- International Training Program in GeroscienceDoctoral School of Basic and Translational Medicine/Department of Public HealthSemmelweis UniversityBudapestHungary
- Division of Clinical PhysiologyDepartment of CardiologyFaculty of MedicineUniversity of DebrecenDebrecenHungary
| | - Agnes Lipecz
- Oklahoma Center for Geroscience and Healthy Brain AgingDepartment of Biochemistry and Molecular BiologyUniversity of Oklahoma Health Sciences CenterOklahoma CityOKUSA
- International Training Program in GeroscienceDoctoral School of Basic and Translational Medicine/Department of Public HealthSemmelweis UniversityBudapestHungary
- Department of OphthalmologyJosa Andras HospitalNyiregyhazaHungary
| | - Orestis Stylianou
- Department of PhysiologyFaculty of MedicineSemmelweis UniversityBudapestHungary
- Institute of Translational MedicineSemmelweis UniversityBudapestHungary
| | - Frigyes Samuel Racz
- Department of PhysiologyFaculty of MedicineSemmelweis UniversityBudapestHungary
| | - Cameron D. Owens
- Oklahoma Center for Geroscience and Healthy Brain AgingDepartment of Biochemistry and Molecular BiologyUniversity of Oklahoma Health Sciences CenterOklahoma CityOKUSA
| | - Jonathan W. Perry
- Oklahoma Center for Geroscience and Healthy Brain AgingDepartment of Biochemistry and Molecular BiologyUniversity of Oklahoma Health Sciences CenterOklahoma CityOKUSA
| | - Stefano Tarantini
- Oklahoma Center for Geroscience and Healthy Brain AgingDepartment of Biochemistry and Molecular BiologyUniversity of Oklahoma Health Sciences CenterOklahoma CityOKUSA
- International Training Program in GeroscienceDoctoral School of Basic and Translational Medicine/Department of Public HealthSemmelweis UniversityBudapestHungary
- Department of Health Promotion SciencesCollege of Public HealthUniversity of Oklahoma Health Sciences CenterOklahoma CityOKUSA
| | - Farzaneh A. Sorond
- Division of Stroke and Neurocritical CareDepartment of NeurologyNorthwestern University Feinberg School of MedicineChicagoILUSA
| | - Jeremy M. Kellawan
- Oklahoma Center for Geroscience and Healthy Brain AgingDepartment of Biochemistry and Molecular BiologyUniversity of Oklahoma Health Sciences CenterOklahoma CityOKUSA
- Department of Health and Exercise ScienceUniversity of OklahomaNormanOKUSA
| | - György Purebl
- Institute of Behavioral SciencesSemmelweis UniversityBudapestHungary
| | - Yuan Yang
- Stephenson School of Biomedical EngineeringThe University of OklahomaTulsaOKUSA
| | - William E. Sonntag
- Oklahoma Center for Geroscience and Healthy Brain AgingDepartment of Biochemistry and Molecular BiologyUniversity of Oklahoma Health Sciences CenterOklahoma CityOKUSA
| | - Anna Csiszar
- Oklahoma Center for Geroscience and Healthy Brain AgingDepartment of Biochemistry and Molecular BiologyUniversity of Oklahoma Health Sciences CenterOklahoma CityOKUSA
- International Training Program in GeroscienceTheoretical Medicine Doctoral School/Departments of Cell Biology and Molecular Medicine and Medical Physics and InformaticsUniversity of SzegedSzegedHungary
| | - Zoltan I. Ungvari
- Oklahoma Center for Geroscience and Healthy Brain AgingDepartment of Biochemistry and Molecular BiologyUniversity of Oklahoma Health Sciences CenterOklahoma CityOKUSA
- International Training Program in GeroscienceDoctoral School of Basic and Translational Medicine/Department of Public HealthSemmelweis UniversityBudapestHungary
- Department of Health Promotion SciencesCollege of Public HealthUniversity of Oklahoma Health Sciences CenterOklahoma CityOKUSA
- International Training Program in GeroscienceTheoretical Medicine Doctoral School/Departments of Cell Biology and Molecular Medicine and Medical Physics and InformaticsUniversity of SzegedSzegedHungary
| | - Andriy Yabluchanskiy
- Oklahoma Center for Geroscience and Healthy Brain AgingDepartment of Biochemistry and Molecular BiologyUniversity of Oklahoma Health Sciences CenterOklahoma CityOKUSA
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21
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Akbari H, Ghofrani S, Zakalvand P, Tariq Sadiq M. Schizophrenia recognition based on the phase space dynamic of EEG signals and graphical features. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.102917] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/31/2022]
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22
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Kim K, Duc NT, Choi M, Lee B. EEG microstate features for schizophrenia classification. PLoS One 2021; 16:e0251842. [PMID: 33989352 PMCID: PMC8121321 DOI: 10.1371/journal.pone.0251842] [Citation(s) in RCA: 23] [Impact Index Per Article: 7.7] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/07/2020] [Accepted: 05/04/2021] [Indexed: 12/11/2022] Open
Abstract
Electroencephalography (EEG) microstate analysis is a method wherein spontaneous EEG activity is segmented at sub-second levels to analyze quasi-stable states. In particular, four archetype microstates and their features are known to reflect changes in brain state in neuropsychiatric diseases. However, previous studies have only reported differences in each microstate feature and have not determined whether microstate features are suitable for schizophrenia classification. Therefore, it is necessary to validate microstate features for schizophrenia classification. Nineteen microstate features, including duration, occurrence, and coverage as well as thirty-one conventional EEG features, including statistical, frequency, and temporal characteristics were obtained from resting-state EEG recordings of 14 patients diagnosed with schizophrenia and from 14 healthy (control) subjects. Machine-learning based multivariate analysis was used to evaluate classification performance. EEG recordings of patients and controls showed different microstate features. More importantly, when differentiating among patients and controls, EEG microstate features outperformed conventional EEG ones. The performance of the microstate features exceeded that of conventional EEG, even after optimization using recursive feature elimination. EEG microstate features applied with conventional EEG features also showed better classification performance than conventional EEG features alone. The current study is the first to validate the use of microstate features to discriminate schizophrenia, suggesting that EEG microstate features are useful for schizophrenia classification.
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Affiliation(s)
- Kyungwon Kim
- Department of Biomedical Science and Engineering (BMSE), Institute Integrated Technology (IIT), Gwangju Institute of Science and Technology (GIST), Cheomdan-gwagiro, Gwangju, South Korea
- Department of Psychiatry and Biomedical Research Institute, Pusan National University Hospital, Busan, South Korea
| | - Nguyen Thanh Duc
- Department of Biomedical Science and Engineering (BMSE), Institute Integrated Technology (IIT), Gwangju Institute of Science and Technology (GIST), Cheomdan-gwagiro, Gwangju, South Korea
- Department of Neurology and Neurosurgery, Montreal Neurological Institute, McGill University, Montreal, Canada
- McConnel Brain Imaging Center, Montreal Neurological Institute, McGill University, Montreal, Canada
- Ludmer Centre for Neuroinformatics and Mental Health, McGill University, Montreal, Canada
| | - Min Choi
- Department of Biomedical Science and Engineering (BMSE), Institute Integrated Technology (IIT), Gwangju Institute of Science and Technology (GIST), Cheomdan-gwagiro, Gwangju, South Korea
| | - Boreom Lee
- Department of Biomedical Science and Engineering (BMSE), Institute Integrated Technology (IIT), Gwangju Institute of Science and Technology (GIST), Cheomdan-gwagiro, Gwangju, South Korea
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23
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Das K, Pachori RB. Schizophrenia detection technique using multivariate iterative filtering and multichannel EEG signals. Biomed Signal Process Control 2021. [DOI: 10.1016/j.bspc.2021.102525] [Citation(s) in RCA: 27] [Impact Index Per Article: 9.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/23/2023]
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24
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Racz FS, Farkas K, Stylianou O, Kaposzta Z, Czoch A, Mukli P, Csukly G, Eke A. Separating scale-free and oscillatory components of neural activity in schizophrenia. Brain Behav 2021; 11:e02047. [PMID: 33538105 PMCID: PMC8119820 DOI: 10.1002/brb3.2047] [Citation(s) in RCA: 17] [Impact Index Per Article: 5.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/17/2020] [Revised: 12/07/2020] [Accepted: 01/08/2021] [Indexed: 12/14/2022] Open
Abstract
INTRODUCTION Alterations in narrow-band spectral power of electroencephalography (EEG) recordings are commonly reported in patients with schizophrenia (SZ). It is well established however that electrophysiological signals comprise a broadband scale-free (or fractal) component generated by mechanisms different from those producing oscillatory neural activity. Despite this known feature, it has not yet been investigated if spectral abnormalities found in SZ could be attributed to scale-free or oscillatory brain function. METHODS In this study, we analyzed resting-state EEG recordings of 14 SZ patients and 14 healthy controls. Scale-free and oscillatory components of the power spectral density (PSD) were separated, and band-limited power (BLP) of the original (mixed) PSD, as well as its fractal and oscillatory components, was estimated in five frequency bands. The scaling property of the fractal component was characterized by its spectral exponent in two distinct frequency ranges (1-13 and 13-30 Hz). RESULTS Analysis of the mixed PSD revealed a decrease of BLP in the delta band in SZ over the central regions; however, this difference could be attributed almost exclusively to a shift of power toward higher frequencies in the fractal component. Broadband neural activity expressed a true bimodal nature in all except frontal regions. Furthermore, both low- and high-range spectral exponents exhibited a characteristic topology over the cortex in both groups. CONCLUSION Our results imply strong functional significance of scale-free neural activity in SZ and suggest that abnormalities in PSD may emerge from alterations of the fractal and not only the oscillatory components of neural activity.
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Affiliation(s)
| | - Kinga Farkas
- Department of Psychiatry and Psychotherapy, Semmelweis University, Budapest, Hungary
| | | | - Zalan Kaposzta
- Department of Physiology, Semmelweis University, Budapest, Hungary
| | - Akos Czoch
- Department of Physiology, Semmelweis University, Budapest, Hungary
| | - Peter Mukli
- Department of Physiology, Semmelweis University, Budapest, Hungary
| | - Gabor Csukly
- Department of Psychiatry and Psychotherapy, Semmelweis University, Budapest, Hungary
| | - Andras Eke
- Department of Physiology, Semmelweis University, Budapest, Hungary
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Diagnosing Schizophrenia Using Effective Connectivity of Resting-State EEG Data. ALGORITHMS 2021. [DOI: 10.3390/a14050139] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 02/06/2023]
Abstract
Schizophrenia is a serious mental illness associated with neurobiological deficits. Even though the brain activities during tasks (i.e., P300 activities) are considered as biomarkers to diagnose schizophrenia, brain activities at rest have the potential to show an inherent dysfunctionality in schizophrenia and can be used to understand the cognitive deficits in these patients. In this study, we developed a machine learning algorithm (MLA) based on eyes closed resting-state electroencephalogram (EEG) datasets, which record the neural activity in the absence of any tasks or external stimuli given to the subjects, aiming to distinguish schizophrenic patients (SCZs) from healthy controls (HCs). The MLA has two steps. In the first step, symbolic transfer entropy (STE), which is a measure of effective connectivity, is applied to resting-state EEG data. In the second step, the MLA uses the STE matrix to find a set of features that can successfully discriminate SCZ from HC. From the results, we found that the MLA could achieve a total accuracy of 96.92%, with a sensitivity of 95%, a specificity of 98.57%, precision of 98.33%, F1-score of 0.97, and Matthews correlation coefficient (MCC) of 0.94 using only 10 out of 1900 STE features, which implies that the STE matrix extracted from resting-state EEG data may be a promising tool for the clinical diagnosis of schizophrenia.
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Stylianou O, Racz FS, Eke A, Mukli P. Scale-Free Coupled Dynamics in Brain Networks Captured by Bivariate Focus-Based Multifractal Analysis. Front Physiol 2021; 11:615961. [PMID: 33613302 PMCID: PMC7887319 DOI: 10.3389/fphys.2020.615961] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/10/2020] [Accepted: 12/29/2020] [Indexed: 12/12/2022] Open
Abstract
While most connectivity studies investigate functional connectivity (FC) in a scale-dependent manner, coupled neural processes may also exhibit broadband dynamics, manifesting as power-law scaling of their measures of interdependence. Here we introduce the bivariate focus-based multifractal (BFMF) analysis as a robust tool for capturing such scale-free relations and use resting-state electroencephalography (EEG) recordings of 12 subjects to demonstrate its performance in reconstructing physiological networks. BFMF was employed to characterize broadband FC between 62 cortical regions in a pairwise manner, with all investigated connections being tested for true bivariate multifractality. EEG channels were also grouped to represent the activity of six resting-state networks (RSNs) in the brain, thus allowing for the analysis of within- and between- RSNs connectivity, separately. Most connections featured true bivariate multifractality, which could be attributed to the genuine scale-free coupling of neural dynamics. Bivariate multifractality showed a characteristic topology over the cortex that was highly concordant among subjects. Long-term autocorrelation was higher in within-RSNs, while the degree of multifractality was generally found stronger in between-RSNs connections. These results offer statistical evidence of the bivariate multifractal nature of functional coupling in the brain and validate BFMF as a robust method to capture such scale-independent coupled dynamics.
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Affiliation(s)
- Orestis Stylianou
- Department of Physiology, Semmelweis University, Budapest, Hungary.,Institute of Translational Medicine, Semmelweis University, Budapest, Hungary
| | | | - Andras Eke
- Department of Physiology, Semmelweis University, Budapest, Hungary.,Department of Radiology and Biomedical Imaging, Yale University School of Medicine, New Haven, CT, United States
| | - Peter Mukli
- Department of Physiology, Semmelweis University, Budapest, Hungary.,Vascular Cognitive Impairment and Neurodegeneration Program, Oklahoma Center for Geroscience and Healthy Brain Aging, Department of Biochemistry and Molecular Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, United States
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Kaposzta Z, Stylianou O, Mukli P, Eke A, Racz FS. Decreased connection density and modularity of functional brain networks during n-back working memory paradigm. Brain Behav 2021; 11:e01932. [PMID: 33185986 PMCID: PMC7821619 DOI: 10.1002/brb3.1932] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Submit a Manuscript] [Subscribe] [Scholar Register] [Received: 08/03/2020] [Revised: 10/05/2020] [Accepted: 10/18/2020] [Indexed: 12/17/2022] Open
Abstract
INTRODUCTION Investigating how the brain adapts to increased mental workload through large-scale functional reorganization appears as an important research question. Functional connectivity (FC) aims at capturing how disparate regions of the brain dynamically interact, while graph theory provides tools for the topological characterization of the reconstructed functional networks. Although numerous studies investigated how FC is altered in response to increased working memory (WM) demand, current results are still contradictory as few studies confirmed the robustness of these findings in a low-density setting. METHODS In this study, we utilized the n-back WM paradigm, in which subjects were presented stimuli (single digits) sequentially, and their task was to decide for each given stimulus if it matched the one presented n-times earlier. Electroencephalography recordings were performed under a control (0-back) and two task conditions of varying difficulty (2- and 3-back). We captured the characteristic connectivity patterns for each difficulty level by performing FC analysis and described the reconstructed functional networks with various graph theoretical measures. RESULTS We found a substantial decrease in FC when transitioning from the 0- to the 2- or 3-back conditions, however, no differences relating to task difficulty were identified. The observed changes in brain network topology could be attributed to the dissociation of two (frontal and occipitotemporal) functional modules that were only present during the control condition. Furthermore, behavioral and performance measures showed both positive and negative correlations to connectivity indices, although only in the higher frequency bands. CONCLUSION The marked decrease in FC may be due to temporarily abandoned connections that are redundant or irrelevant in solving the specific task. Our results indicate that FC analysis is a robust tool for investigating the response of the brain to increased cognitive workload.
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Affiliation(s)
- Zalan Kaposzta
- Department of Physiology, Semmelweis University, Budapest, Hungary
| | | | - Peter Mukli
- Department of Physiology, Semmelweis University, Budapest, Hungary
| | - Andras Eke
- Department of Physiology, Semmelweis University, Budapest, Hungary
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