1
|
Gautam H, Khan S, Nidhi, Sofo A, Khan NA. Appraisal of the Role of Gaseous Signaling Molecules in Thermo-Tolerance Mechanisms in Plants. PLANTS (BASEL, SWITZERLAND) 2024; 13:791. [PMID: 38592775 PMCID: PMC10975175 DOI: 10.3390/plants13060791] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/11/2024] [Revised: 02/19/2024] [Accepted: 03/09/2024] [Indexed: 04/11/2024]
Abstract
A significant threat to the ongoing rise in temperature caused by global warming. Plants have many stress-resistance mechanisms, which is responsible for maintaining plant homeostasis. Abiotic stresses largely increase gaseous molecules' synthesis in plants. The study of gaseous signaling molecules has gained attention in recent years. The role of gaseous molecules, such as nitric oxide (NO), hydrogen sulfide (H2S), carbon dioxide (CO2), carbon monoxide (CO), methane (CH4), and ethylene, in plants under temperature high-temperature stress are discussed in the current review. Recent studies revealed the critical function that gaseous molecules play in controlling plant growth and development and their ability to respond to various abiotic stresses. Here, we provide a thorough overview of current advancements that prevent heat stress-related plant damage via gaseous molecules. We also explored and discussed the interaction of gaseous molecules. In addition, we provided an overview of the role played by gaseous molecules in high-temperature stress responses, along with a discussion of the knowledge gaps and how this may affect the development of high-temperature-resistant plant species.
Collapse
Affiliation(s)
- Harsha Gautam
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Aligarh Muslim University, Aligarh 202002, India
| | - Sheen Khan
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Aligarh Muslim University, Aligarh 202002, India
| | - Nidhi
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Aligarh Muslim University, Aligarh 202002, India
| | - Adriano Sofo
- Department of European and Mediterranean Cultures: Architecture, Environment, Cultural Heritage (DiCEM), University of Basilicata, 75100 Matera, Italy
| | - Nafees A. Khan
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Aligarh Muslim University, Aligarh 202002, India
| |
Collapse
|
2
|
Roy S, Kapoor R, Mathur P. Revisiting Changes in Growth, Physiology and Stress Responses of Plants under the Effect of Enhanced CO2 and Temperature. PLANT & CELL PHYSIOLOGY 2024; 65:4-19. [PMID: 37935412 DOI: 10.1093/pcp/pcad121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/30/2023] [Revised: 08/07/2023] [Accepted: 10/09/2023] [Indexed: 11/09/2023]
Abstract
Climate change has universally affected the whole ecosystem in a unified manner and is known to have improbable effects on agricultural productivity and food security. Carbon dioxide (CO2) and temperature are the major environmental factors that have been shown to increase sharply during the last century and are directly responsible for affecting plant growth and development. A number of previous investigations have deliberated the positive effects of elevated CO2 on plant growth and development of various C3 crops, while detrimental effects of enhanced temperature on different crop plants like rice, wheat, maize and legumes are generally observed. A combined effect of elevated CO2 and temperature has yet to be studied in great detail; therefore, this review attempts to delineate the interactive effects of enhanced CO2 and temperature on plant growth, development, physiological and molecular responses. Elevated CO2 maintains leaf photosynthesis rate, respiration, transpiration and stomatal conductance in the presence of elevated temperature and sustains plant growth and productivity in the presence of both these environmental factors. Concomitantly, their interaction also affects the nutritional quality of seeds and leads to alterations in the composition of secondary metabolites. Elevated CO2 and temperature modulate phytohormone concentration in plants, and due to this fact, both environmental factors have substantial effects on abiotic and biotic stresses. Elevated CO2 and temperature have been shown to have mitigating effects on plants in the presence of other abiotic stress agents like drought and salinity, while no such pattern has been observed in the presence of biotic stress agents. This review focuses on the interactive effects of enhanced CO2 and temperature on different plants and is the first of its kind to deliver their combined responses in such detail.
Collapse
Affiliation(s)
- Swarnendu Roy
- Plant Biochemistry Laboratory, Department of Botany, University of North Bengal, Raja Rammohunpur, Dist. Darjeeling, West Bengal 734013, India
| | - Rupam Kapoor
- Department of Botany, University of Delhi, Delhi 110007, India
| | - Piyush Mathur
- Microbiology Laboratory, Department of Botany, University of North Bengal, Raja Rammohunpur, Dist. Darjeeling, West Bengal 734013, India
| |
Collapse
|
3
|
de Oliveira US, de Souza AH, de Andrade MT, Oliveira LA, Gouvea DG, Martins SCV, Ramalho JDC, Cardoso AA, DaMatta FM. Carbon gain is coordinated with enhanced stomatal conductance and hydraulic architecture in coffee plants acclimated to elevated [CO 2]: The interplay with irradiance supply. PLANT PHYSIOLOGY AND BIOCHEMISTRY : PPB 2023; 204:108145. [PMID: 37907041 DOI: 10.1016/j.plaphy.2023.108145] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2023] [Revised: 10/09/2023] [Accepted: 10/26/2023] [Indexed: 11/02/2023]
Abstract
We recently demonstrated that, under elevated [CO2] (eCa), coffee (Coffea arabica L.) plants grown at high light (HL), but not at low light (LL), display higher stomatal conductance (gs) than at ambient [CO2] (aCa). We then hypothesized that the enhanced gs at eCa/HL, if sustained at the long-term, would lead to adjustments in hydraulic architecture. To test this hypothesis, potted plants of coffee were grown in open-top chambers for 12 months under HL or LL (ca. 9 or 1 mol photons m-2 day-1, respectively); these light treatments were combined with two [CO2] levels (ca. 437 or 705 μmol mol-1, respectively). Under eCa/HL, increased gs was closely accompanied by increases in branch and leaf hydraulic conductances, suggesting a coordinated response between liquid- and vapor-phase water flows throughout the plant. Still under HL, eCa also resulted in increased Huber value (sapwood area-to-total leaf area), sapwood area-to-stem diameter, and root mass-to-total leaf area, thus further improving the water supply to the leaves. Our results demonstrate that Ca is a central player in coffee physiology increasing carbon gain through a close association between stomatal function and an improved hydraulic architecture under HL conditions.
Collapse
Affiliation(s)
- Uéliton S de Oliveira
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, MG, Brazil
| | - Antonio H de Souza
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, MG, Brazil
| | - Moab T de Andrade
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, MG, Brazil
| | - Leonardo A Oliveira
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, MG, Brazil; Department of Crop and Soil Sciences, North Carolina State University, Raleigh, NC, 27695, USA
| | - Débora G Gouvea
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, MG, Brazil
| | - Samuel C V Martins
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, MG, Brazil
| | - José D C Ramalho
- PlantStress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. da República, 2784-505, Oeiras, Portugal; Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, 2829-516, Caparica, Portugal
| | - Amanda A Cardoso
- Department of Crop and Soil Sciences, North Carolina State University, Raleigh, NC, 27695, USA
| | - Fábio M DaMatta
- Departamento de Biologia Vegetal, Universidade Federal de Viçosa, 36570-900, Viçosa, MG, Brazil.
| |
Collapse
|
4
|
de Oliveira KKP, de Oliveira RR, Chalfun-Junior A. Small RNAs: Promising Molecules to Tackle Climate Change Impacts in Coffee Production. PLANTS (BASEL, SWITZERLAND) 2023; 12:3531. [PMID: 37895993 PMCID: PMC10610182 DOI: 10.3390/plants12203531] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/31/2023] [Revised: 09/28/2023] [Accepted: 09/30/2023] [Indexed: 10/29/2023]
Abstract
Over the centuries, human society has evolved based on the ability to select and use more adapted species for food supply, which means making plant species tastier and more productive in particular environmental conditions. However, nowadays, this scenario is highly threatened by climate change, especially by the changes in temperature and greenhouse gasses that directly affect photosynthesis, which highlights the need for strategic studies aiming at crop breeding and guaranteeing food security. This is especially worrying for crops with complex phenology, genomes with low variability, and the ones that support a large production chain, such as Coffea sp. L. In this context, recent advances shed some light on the genome function and transcriptional control, revealing small RNAs (sRNAs) that are responsible for environmental cues and could provide variability through gene expression regulation. Basically, sRNAs are responsive to environmental changes and act on the transcriptional and post-transcriptional gene silencing pathways that regulate gene expression and, consequently, biological processes. Here, we first discuss the predicted impact of climate changes on coffee plants and coffee chain production and then the role of sRNAs in response to environmental changes, especially temperature, in different species, together with their potential as tools for genetic improvement. Very few studies in coffee explored the relationship between sRNAs and environmental cues; thus, this review contributes to understanding coffee development in the face of climate change and towards new strategies of crop breeding.
Collapse
Affiliation(s)
| | | | - Antonio Chalfun-Junior
- Laboratory of Plant Molecular Physiology, Plant Physiology Sector, Institute of Biology, Federal University of Lavras, Lavras 3037, Brazil; (K.K.P.d.O.); (R.R.d.O.)
| |
Collapse
|
5
|
Sarzynski T, Bertrand B, Rigal C, Marraccini P, Vaast P, Georget F, Campa C, Abdallah C, Nguyen CTQ, Nguyen HP, Nguyen HTT, Ngoc QL, Ngan GK, Viet TV, Navarini L, Lonzarich V, Bossolasco L, Etienne H. Genetic-environment interactions and climatic variables effect on bean physical characteristics and chemical composition of Coffea arabica. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2023; 103:4692-4703. [PMID: 36905183 DOI: 10.1002/jsfa.12544] [Citation(s) in RCA: 1] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2022] [Revised: 02/25/2023] [Accepted: 03/11/2023] [Indexed: 06/06/2023]
Abstract
BACKGROUND The effects of the environment and genotype in the coffee bean chemical composition were studied using nine trials covering an altitudinal gradient [600-1100 m above sea level (a.s.l.)] with three genotypes of Coffea arabica in the northwest mountainous region of Vietnam. The impacts of the climatic conditions on bean physical characteristics and chemical composition were assessed. RESULTS We showed that the environment had a significant effect on the bean density and on all bean chemical compounds. The environment effect was stronger than the genotype and genotype-environment interaction effects for cafestol, kahweol, arachidic (C20:0), behenic acid (C22:0), 2,3-butanediol, 2-methyl-2-buten-1-ol, benzaldehyde, benzene ethanol, butyrolactone, decane, dodecane, ethanol, pentanoic acid, and phenylacetaldehyde bean content. A 2 °C increase in temperature had more influence on bean chemical compounds than a 100 mm increase in soil water content. Temperature was positively correlated with lipids and volatile compounds. With an innovative method using iterative moving averages, we showed that correlation of temperature, vapour pressure deficit (VPD) and rainfall with lipids and volatiles was higher between the 10th and 20th weeks after flowering highlighting this period as crucial for the synthesis of these chemicals. Genotype specific responses were evidenced and could be considered in future breeding programmes to maintain coffee beverage quality in the midst of climate change. CONCLUSION This first study of the effect of the genotype-environment interactions on chemical compounds enhances our understanding of the sensitivity of coffee quality to genotype environment interactions during bean development. This work addresses the growing concern of the effect of climate change on speciality crops and more specifically coffee. © 2023 The Authors. Journal of The Science of Food and Agriculture published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry.
Collapse
Affiliation(s)
- Thuan Sarzynski
- CIRAD (Centre de Coopération Internationale en Recherche Agronomique Pour le Développement), UMR DIADE, Montpellier, France
- UMR DIADE (Diversity, Adaptation, Development of Plants), University of Montpellier, CIRAD, IRD, Montpellier, France
- NOMAFSI (Northern Mountainous Agriculture Forestry Science Institute) Mai Son Research Centre, Son La, Vietnam
| | - Benoît Bertrand
- CIRAD (Centre de Coopération Internationale en Recherche Agronomique Pour le Développement), UMR DIADE, Montpellier, France
- UMR DIADE (Diversity, Adaptation, Development of Plants), University of Montpellier, CIRAD, IRD, Montpellier, France
| | - Clément Rigal
- CIRAD UMR ABSYS, Montpellier, France
- ABSYS, Université Montpellier, CIRAD, INRAE, Supagro, Montpellier, France
- ICRAF, Vietnam office, Hanoi, Vietnam
| | - Pierre Marraccini
- CIRAD (Centre de Coopération Internationale en Recherche Agronomique Pour le Développement), UMR DIADE, Montpellier, France
- UMR DIADE (Diversity, Adaptation, Development of Plants), University of Montpellier, CIRAD, IRD, Montpellier, France
- AGI (Agriculture Genetics Institute), Hanoi, Vietnam
| | - Philippe Vaast
- ICRAF, Vietnam office, Hanoi, Vietnam
- UMR Eco & Sols, CIRAD, Montpellier, France
| | - Frédéric Georget
- CIRAD (Centre de Coopération Internationale en Recherche Agronomique Pour le Développement), UMR DIADE, Montpellier, France
- UMR DIADE (Diversity, Adaptation, Development of Plants), University of Montpellier, CIRAD, IRD, Montpellier, France
| | - Claudine Campa
- UMR DIADE (Diversity, Adaptation, Development of Plants), University of Montpellier, CIRAD, IRD, Montpellier, France
- IRD (Institut de Recherche pour le Développement), Montpellier, France
| | - Cécile Abdallah
- UMR DIADE (Diversity, Adaptation, Development of Plants), University of Montpellier, CIRAD, IRD, Montpellier, France
- IRD (Institut de Recherche pour le Développement), Montpellier, France
| | - Chang Thi Quynh Nguyen
- NOMAFSI (Northern Mountainous Agriculture Forestry Science Institute) Mai Son Research Centre, Son La, Vietnam
| | - Hung Phi Nguyen
- NOMAFSI (Northern Mountainous Agriculture Forestry Science Institute) Mai Son Research Centre, Son La, Vietnam
| | - Hai Thi Thanh Nguyen
- NOMAFSI (Northern Mountainous Agriculture Forestry Science Institute) Mai Son Research Centre, Son La, Vietnam
- NOMAFSI headquarter, Phu Tho, Vietnam
| | | | | | | | | | | | - Laurent Bossolasco
- ECOM-SMS (Sustainable Management Services ECOM Agroindustrial), Ho Chi Minh City, Vietnam
| | - Hervé Etienne
- CIRAD (Centre de Coopération Internationale en Recherche Agronomique Pour le Développement), UMR DIADE, Montpellier, France
- UMR DIADE (Diversity, Adaptation, Development of Plants), University of Montpellier, CIRAD, IRD, Montpellier, France
| |
Collapse
|
6
|
Marques AC, Lidon FC, Coelho ARF, Pessoa CC, Daccak D, Luís IC, Simões M, Scotti-Campos P, Almeida AS, Guerra M, Leitão RG, Bagulho A, Moreira J, Pessoa MF, Legoinha P, Ramalho JC, Semedo JN, Palha L, Silva C, Silva MM, Oliveira K, Pais IP, Reboredo FH. Elemental Composition and Implications on Brown Rice Flour Biofortified with Selenium. PLANTS (BASEL, SWITZERLAND) 2023; 12:1611. [PMID: 37111835 PMCID: PMC10140823 DOI: 10.3390/plants12081611] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 02/09/2023] [Revised: 03/14/2023] [Accepted: 04/04/2023] [Indexed: 06/19/2023]
Abstract
Rice (Oryza sativa L.) is one of the most economically and socially important cereals in the world. Several strategies such as biofortification have been developed in a way eco-friendly and sustainable to enhance crop productivity. This study implemented an agronomic itinerary in Ariete and Ceres rice varieties in experimental fields using the foliar application of selenium (Se) to increase rice nutritional value. At strategic phases of the plant's development (at the end of booting, anthesis, and at the milky grain stage), they were sprayed with sodium selenate (Na2SeO4) and sodium selenite (Na2SeO3). In the first foliar application plants were sprayed with 500 g Se·ha-1 and in the remaining two foliar applications were sprayed with 300 g Se·ha-1. The effects of Se in the level of micro and macronutrients in brown grains, the localization of Se in these grains, and the subsequent quality parameters such as colorimetric characteristics and total protein were considered. After grain harvesting, the application of selenite showed the highest enrichment in all grain with levels reaching 17.06 µg g-1 Se and 14.28 µg g-1 Se in Ariete and Ceres varieties, respectively. In the Ceres and Ariete varieties, biofortification significantly affected the K and P contents. Regarding Ca, a clear trend prevailed suggesting that Se antagonizes the uptake of it, while for the remaining elements in general (except Mn) no significant differences were noted. Protein content increased with selenite treatment in the Ariete variety but not in Ceres. Therefore, it was possible to conclude, without compromising quality, that there was an increase in the nutritional content of Se in brown rice grain.
Collapse
Affiliation(s)
- Ana Coelho Marques
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
| | - Fernando C. Lidon
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
| | - Ana Rita F. Coelho
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
| | - Cláudia Campos Pessoa
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
| | - Diana Daccak
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
| | - Inês Carmo Luís
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
| | - Manuela Simões
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
| | - Paula Scotti-Campos
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Quinta do Marquês, Av. República, 2780-157 Oeiras, Portugal
| | - Ana Sofia Almeida
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Estrada de Gil Vaz 6, 7351-901 Elvas, Portugal
| | - Mauro Guerra
- LIBPhys, Physics Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal (R.G.L.)
| | - Roberta G. Leitão
- LIBPhys, Physics Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal (R.G.L.)
| | - Ana Bagulho
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Estrada de Gil Vaz 6, 7351-901 Elvas, Portugal
| | - José Moreira
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Estrada de Gil Vaz 6, 7351-901 Elvas, Portugal
| | - Maria F. Pessoa
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
| | - Paulo Legoinha
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
| | - José C. Ramalho
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- PlantStress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Associate Laboratory TERRA, Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. República, 2784-505 Oeiras, Portugal
- PlantStress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Associate Laboratory TERRA, Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. República, Tapada da Ajuda, 1349-017 Lisboa, Portugal
| | - José N. Semedo
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Quinta do Marquês, Av. República, 2780-157 Oeiras, Portugal
| | - Lourenço Palha
- Centro de Competências do Arroz (COTARROZ), 2120-014 Salvaterra de Magos, Portugal (C.S.)
| | - Cátia Silva
- Centro de Competências do Arroz (COTARROZ), 2120-014 Salvaterra de Magos, Portugal (C.S.)
| | - Maria Manuela Silva
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
| | - Karliana Oliveira
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
| | - Isabel P. Pais
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Quinta do Marquês, Av. República, 2780-157 Oeiras, Portugal
| | - Fernando H. Reboredo
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal
| |
Collapse
|
7
|
Marques I, Rodrigues AP, Gouveia D, Lidon FC, Martins S, Semedo MC, Gaillard JC, Pais IP, Semedo JN, Scotti-Campos P, Reboredo FH, Partelli FL, DaMatta FM, Armengaud J, Ribeiro-Barros AI, Ramalho JC. High-resolution shotgun proteomics reveals that increased air [CO 2] amplifies the acclimation response of coffea species to drought regarding antioxidative, energy, sugar, and lipid dynamics. JOURNAL OF PLANT PHYSIOLOGY 2022; 276:153788. [PMID: 35944291 DOI: 10.1016/j.jplph.2022.153788] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/21/2022] [Revised: 07/25/2022] [Accepted: 07/26/2022] [Indexed: 06/15/2023]
Abstract
As drought threatens crop productivity it is crucial to characterize the defense mechanisms against water deficit and unveil their interaction with the expected rise in the air [CO2]. For that, plants of Coffea canephora cv. Conilon Clone 153 (CL153) and C. arabica cv. Icatu grown under 380 (aCO2) or 700 μL L-1 (eCO2) were exposed to moderate (MWD) and severe (SWD) water deficits. Responses were characterized through the activity and/or abundance of a selected set of proteins associated with antioxidative (e.g., Violaxanthin de-epoxidase, Superoxide dismutase, Ascorbate peroxidases, Monodehydroascorbate reductase), energy/sugar (e.g., Ferredoxin-NADP reductase, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase, sucrose synthase, mannose-6-phosphate isomerase, Enolase), and lipid (Lineolate 13S-lipoxygenase) processes, as well as with other antioxidative (ascorbate) and protective (HSP70) molecules. MWD caused small changes in both genotypes regardless of [CO2] level while under the single imposition to SWD, only Icatu showed a global reinforcement of most studied proteins supporting its tolerance to drought. eCO2 alone did not promote remarkable changes but strengthened a robust multi-response under SWD, even supporting the reversion of impacts already observed by CL153 at aCO2. In the context of climate changes where water constraints and [CO2] levels are expected to increase, these results highlight why eCO2 might have an important role in improving drought tolerance in Coffea species.
Collapse
Affiliation(s)
- Isabel Marques
- PlantStress & Biodiversity Lab., Centro de Estudos Florestais (CEF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. da República, 2784-505 Oeiras, and Tapada da Ajuda, 1349-017, Lisboa, Portugal.
| | - Ana P Rodrigues
- PlantStress & Biodiversity Lab., Centro de Estudos Florestais (CEF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. da República, 2784-505 Oeiras, and Tapada da Ajuda, 1349-017, Lisboa, Portugal.
| | - Duarte Gouveia
- Université Paris-Saclay, CEA, INRAE, Département Médicaments et Technologies pour la Santé (DMTS), SPI, F-F-30200, Bagnols-sur-Cèze, France.
| | - Fernando C Lidon
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, 2829-516, Caparica, Portugal.
| | - Sónia Martins
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, 2829-516, Caparica, Portugal; Departamento de Engenharia Química, Instituto Superior de Engenharia de Lisboa, Instituto Politécnico de Lisboa, R. Conselheiro Emídio Navarro 1, 1959-007, Lisboa, Portugal.
| | - Magda C Semedo
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, 2829-516, Caparica, Portugal; Departamento de Engenharia Química, Instituto Superior de Engenharia de Lisboa, Instituto Politécnico de Lisboa, R. Conselheiro Emídio Navarro 1, 1959-007, Lisboa, Portugal.
| | - Jean-Charles Gaillard
- Université Paris-Saclay, CEA, INRAE, Département Médicaments et Technologies pour la Santé (DMTS), SPI, F-F-30200, Bagnols-sur-Cèze, France.
| | - Isabel P Pais
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, 2829-516, Caparica, Portugal; Unid. Investigação em Biotecnologia e Recursos Genéticos, Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Quinta do Marquês, Av. República, 2784-505, Oeiras, Portugal.
| | - José N Semedo
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, 2829-516, Caparica, Portugal; Unid. Investigação em Biotecnologia e Recursos Genéticos, Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Quinta do Marquês, Av. República, 2784-505, Oeiras, Portugal.
| | - Paula Scotti-Campos
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, 2829-516, Caparica, Portugal; Unid. Investigação em Biotecnologia e Recursos Genéticos, Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Quinta do Marquês, Av. República, 2784-505, Oeiras, Portugal.
| | - Fernando H Reboredo
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, 2829-516, Caparica, Portugal.
| | - Fábio L Partelli
- Centro Univ. Norte do Espírito Santo (CEUNES), Dept. Ciências Agrárias e Biológicas (DCAB), Univ. Federal Espírito Santo (UFES), Rod. BR 101 Norte, Km. 60, Bairro Litorâneo, CEP: 29932-540, São Mateus, ES, Brazil.
| | - Fábio M DaMatta
- Dept. Biologia Vegetal, Univ. Federal Viçosa (UFV), 36570-000, Viçosa, MG, Brazil.
| | - Jean Armengaud
- Université Paris-Saclay, CEA, INRAE, Département Médicaments et Technologies pour la Santé (DMTS), SPI, F-F-30200, Bagnols-sur-Cèze, France.
| | - Ana I Ribeiro-Barros
- PlantStress & Biodiversity Lab., Centro de Estudos Florestais (CEF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. da República, 2784-505 Oeiras, and Tapada da Ajuda, 1349-017, Lisboa, Portugal; Departamento de Engenharia Química, Instituto Superior de Engenharia de Lisboa, Instituto Politécnico de Lisboa, R. Conselheiro Emídio Navarro 1, 1959-007, Lisboa, Portugal.
| | - José C Ramalho
- PlantStress & Biodiversity Lab., Centro de Estudos Florestais (CEF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. da República, 2784-505 Oeiras, and Tapada da Ajuda, 1349-017, Lisboa, Portugal; Departamento de Engenharia Química, Instituto Superior de Engenharia de Lisboa, Instituto Politécnico de Lisboa, R. Conselheiro Emídio Navarro 1, 1959-007, Lisboa, Portugal.
| |
Collapse
|
8
|
Description of an Arabica Coffee Ideotype for Agroforestry Cropping Systems: A Guideline for Breeding More Resilient New Varieties. PLANTS 2022; 11:plants11162133. [PMID: 36015436 PMCID: PMC9414076 DOI: 10.3390/plants11162133] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Revised: 08/01/2022] [Accepted: 08/08/2022] [Indexed: 11/17/2022]
Abstract
Climate change (CC) is already impacting Arabica coffee cultivation in the intertropical zone. To deal with this situation, it is no longer possible to manage this crop using industrial agriculture techniques, which has been the main strategy implemented since the Green Revolution. Developing a more sustainable agriculture system that respects people and the environment is essential to guarantee future generations’ access to natural resources. In the case of Arabica coffee, the solution has been found. Agroforestry is proposed as an ecosystem-based strategy to mitigate and adapt to CC. At least 60% of Arabica coffee is produced in agroforestry systems (AFSs), which are the most sustainable way to produce coffee. Nevertheless, AFS coffee cultivation is currently uncompetitive partly because all modern varieties, selected for full-sun intensive cropping systems, have low yields in shaded environments. Here we review the reasons why agroforestry is part of the solution to CC, and why no breeding work has been undertaken for this cropping system. Based on the literature data, for breeding purposes we also define for the first time one possible coffee ideotype required for AFS coffee cultivation. The four main traits are: (1) productivity based on F1 hybrid vigor, tree volume and flowering intensity under shade; (2) beverage quality by using wild Ethiopian accessions as female progenitors and selecting for this criterion using specific biochemical and molecular predictors; (3) plant health to ensure good tolerance to stress, especially biotic; and (4) low fertilization to promote sustainable production. For each of these traits, numerous criteria with threshold values to be achieved per trait were identified. Through this research, an ecosystem-based breeding strategy was defined to help create new F1 hybrid varieties within the next 10 years.
Collapse
|
9
|
Lobo AKM, Catarino ICA, Silva EA, Centeno DC, Domingues DS. Physiological and Molecular Responses of Woody Plants Exposed to Future Atmospheric CO2 Levels under Abiotic Stresses. PLANTS 2022; 11:plants11141880. [PMID: 35890514 PMCID: PMC9322912 DOI: 10.3390/plants11141880] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 06/06/2022] [Revised: 07/01/2022] [Accepted: 07/05/2022] [Indexed: 11/16/2022]
Abstract
Climate change is mainly driven by the accumulation of carbon dioxide (CO2) in the atmosphere in the last century. Plant growth is constantly challenged by environmental fluctuations including heat waves, severe drought and salinity, along with ozone accumulation in the atmosphere. Food security is at risk in an increasing world population, and it is necessary to face the current and the expected effects of global warming. The effects of the predicted environment scenario of elevated CO2 concentration (e[CO2]) and more severe abiotic stresses have been scarcely investigated in woody plants, and an integrated view involving physiological, biochemical and molecular data is missing. This review highlights the effects of elevated CO2 in the metabolism of woody plants and the main findings of its interaction with abiotic stresses, including a molecular point of view, aiming to improve the understanding of how woody plants will face the predicted environmental conditions. Overall, e[CO2] stimulates photosynthesis and growth and attenuates mild to moderate abiotic stress in woody plants if root growth and nutrients are not limited. Moreover, e[CO2] does not induce acclimation in most tree species. Some high-throughput analyses involving omics techniques were conducted to better understand how these processes are regulated. Finally, knowledge gaps in the understanding of how the predicted climate condition will affect woody plant metabolism were identified, with the aim of improving the growth and production of this plant species.
Collapse
Affiliation(s)
- Ana Karla M. Lobo
- Department of Biodiversity, Institute of Biosciences, São Paulo State University, UNESP, Rio Claro 13506-900, Brazil;
- Correspondence: (A.K.M.L.); (D.S.D.)
| | - Ingrid C. A. Catarino
- Department of Biodiversity, Institute of Biosciences, São Paulo State University, UNESP, Rio Claro 13506-900, Brazil;
| | - Emerson A. Silva
- Institute of Environmental Research, São Paulo 04301-002, Brazil;
| | - Danilo C. Centeno
- Centre for Natural and Human Sciences, Federal University of ABC, São Bernardo do Campo 09606-045, Brazil;
| | - Douglas S. Domingues
- Department of Biodiversity, Institute of Biosciences, São Paulo State University, UNESP, Rio Claro 13506-900, Brazil;
- Correspondence: (A.K.M.L.); (D.S.D.)
| |
Collapse
|
10
|
Farooq MS, Uzair M, Raza A, Habib M, Xu Y, Yousuf M, Yang SH, Ramzan Khan M. Uncovering the Research Gaps to Alleviate the Negative Impacts of Climate Change on Food Security: A Review. FRONTIERS IN PLANT SCIENCE 2022; 13:927535. [PMID: 35903229 PMCID: PMC9315450 DOI: 10.3389/fpls.2022.927535] [Citation(s) in RCA: 32] [Impact Index Per Article: 16.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/24/2022] [Accepted: 06/15/2022] [Indexed: 05/05/2023]
Abstract
Climatic variability has been acquiring an extensive consideration due to its widespread ability to impact food production and livelihoods. Climate change has the potential to intersperse global approaches in alleviating hunger and undernutrition. It is hypothesized that climate shifts bring substantial negative impacts on food production systems, thereby intimidating food security. Vast developments have been made addressing the global climate change, undernourishment, and hunger for the last few decades, partly due to the increase in food productivity through augmented agricultural managements. However, the growing population has increased the demand for food, putting pressure on food systems. Moreover, the potential climate change impacts are still unclear more obviously at the regional scales. Climate change is expected to boost food insecurity challenges in areas already vulnerable to climate change. Human-induced climate change is expected to impact food quality, quantity, and potentiality to dispense it equitably. Global capabilities to ascertain the food security and nutritional reasonableness facing expeditious shifts in biophysical conditions are likely to be the main factors determining the level of global disease incidence. It can be apprehended that all food security components (mainly food access and utilization) likely be under indirect effect via pledged impacts on ménage, incomes, and damages to health. The corroboration supports the dire need for huge focused investments in mitigation and adaptation measures to have sustainable, climate-smart, eco-friendly, and climate stress resilient food production systems. In this paper, we discussed the foremost pathways of how climate change impacts our food production systems as well as the social, and economic factors that in the mastery of unbiased food distribution. Likewise, we analyze the research gaps and biases about climate change and food security. Climate change is often responsible for food insecurity issues, not focusing on the fact that food production systems have magnified the climate change process. Provided the critical threats to food security, the focus needs to be shifted to an implementation oriented-agenda to potentially cope with current challenges. Therefore, this review seeks to have a more unprejudiced view and thus interpret the fusion association between climate change and food security by imperatively scrutinizing all factors.
Collapse
Affiliation(s)
- Muhammad Shahbaz Farooq
- Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences (CAAS), Beijing, China
- National Institute for Genomics and Advanced Biotechnology, Islamabad, Pakistan
| | - Muhammad Uzair
- National Institute for Genomics and Advanced Biotechnology, Islamabad, Pakistan
| | - Ali Raza
- College of Agriculture, Oil Crops Research Institute, Fujian Agriculture and Forestry University (FAFU), Fuzhou, China
| | - Madiha Habib
- National Institute for Genomics and Advanced Biotechnology, Islamabad, Pakistan
| | - Yinlong Xu
- Institute of Environment and Sustainable Development in Agriculture, Chinese Academy of Agricultural Sciences (CAAS), Beijing, China
| | | | - Seung Hwan Yang
- Department of Biotechnology, Chonnam National University, Yeosu, South Korea
| | | |
Collapse
|
11
|
Hao K, Liu X, Wang X, Fei L, Liu L, Jie F, Li Y, Yang Q, Shan Y. Optimizing Shade Cultivation Method and Irrigation Amount to Improve Photosynthetic Characteristics, Bean Yield, and Quality of Coffee in a Subtropical Monsoon Climate. FRONTIERS IN PLANT SCIENCE 2022; 13:848524. [PMID: 35574077 PMCID: PMC9100806 DOI: 10.3389/fpls.2022.848524] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/04/2022] [Accepted: 04/05/2022] [Indexed: 06/15/2023]
Abstract
Reasonable water and light management technology can improve economic benefits, coffee yield, and quality. We used cluster analysis and principal component analysis to evaluate and optimize the water and light management technology with high coffee yield, quality, and economic benefits in a subtropical monsoon climate region of China. The experiment was arranged in a randomized complete block design with two factors (3 irrigation levels × 4 shade cultivation treatments) replicated four times during 2016-2017. The irrigation levels consisted of full irrigation (FI) and two deficit irrigations (DI L : 75% FI, DI S : 50% FI). The shade cultivation treatments consisted of no shade cultivation (S0) and three shade cultivation modes (S L : intercropping with four lines of coffee and one line of banana; S M : intercropping with three lines of coffee and one line of banana; S S : intercropping with two lines of coffee and one line of banana). The results showed that the effects of irrigation level and shade cultivation mode on growth, crop yield, most of the photosynthetic characteristics, and nutritional quality were significant (p < 0.05). Regression analysis showed that the leaf radiation use efficiency (RUE) showed a significant negative exponential relation or logistic-curve variation with photosynthetically active radiation (PAR). The bean yield increased with an increase of the shade degree when water was seriously deficient, whereas it first increased and then decreased with an increase of the shade degree under FI and DI L . Based on both cluster analysis and principal component analysis, the FIS S treatment resulted in the highest comprehensive quality of coffee, followed by the FIS M treatment; the DI S S0 treatment obtained the lowest quality. Compared with the FIS0 treatment, the FIS M treatment increased the 2-year average bean yield and net income by 15.0 and 28.5%, respectively, whereas the FIS S treatment decreased these by 17.8 and 8.7%, respectively. To summarize, FIS S treatment significantly improved the nutritional quality of coffee, and FIS M treatment significantly increased the dry bean yield and economic benefits of coffee. The results of the study could provide a theoretical basis for water-saving irrigation and shade cultivation management of coffee in a subtropical monsoon climate region of China.
Collapse
Affiliation(s)
- Kun Hao
- Faculty of Modern Agricultural Engineering, Kunming University of Science and Technology, Kunming, China
- State Key Laboratory of Eco-Hydraulic in Northwest Arid Region, Xi’an University of Technology, Xi’an, China
| | - Xiaogang Liu
- Faculty of Modern Agricultural Engineering, Kunming University of Science and Technology, Kunming, China
| | - Xiukang Wang
- College of Life Science, Yan’an University, Yan’an, China
| | - Liangjun Fei
- State Key Laboratory of Eco-Hydraulic in Northwest Arid Region, Xi’an University of Technology, Xi’an, China
| | - Lihua Liu
- State Key Laboratory of Eco-Hydraulic in Northwest Arid Region, Xi’an University of Technology, Xi’an, China
| | - Feilong Jie
- State Key Laboratory of Eco-Hydraulic in Northwest Arid Region, Xi’an University of Technology, Xi’an, China
| | - Yilin Li
- Faculty of Modern Agricultural Engineering, Kunming University of Science and Technology, Kunming, China
| | - Qiliang Yang
- Faculty of Modern Agricultural Engineering, Kunming University of Science and Technology, Kunming, China
| | - Yunhui Shan
- Dehong HeiRou Coffee Co., Ltd., Dehong, China
| |
Collapse
|
12
|
Koutouleas A, Sarzynski T, Bordeaux M, Bosselmann AS, Campa C, Etienne H, Turreira-García N, Rigal C, Vaast P, Ramalho JC, Marraccini P, Ræbild A. Shaded-Coffee: A Nature-Based Strategy for Coffee Production Under Climate Change? A Review. FRONTIERS IN SUSTAINABLE FOOD SYSTEMS 2022. [DOI: 10.3389/fsufs.2022.877476] [Citation(s) in RCA: 5] [Impact Index Per Article: 2.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/17/2022] Open
Abstract
Coffee is deemed to be a high-risk crop in light of upcoming climate changes. Agroforestry practices have been proposed as a nature-based strategy for coffee farmers to mitigate and adapt to future climates. However, with agroforestry systems comes shade, a highly contentious factor for coffee production in terms of potential yield reduction, as well as additional management needs and interactions between shade trees and pest and disease. In this review, we summarize recent research relating to the effects of shade on (i) farmers' use and perceptions, (ii) the coffee microenvironment, (iii) pest and disease incidence, (iv) carbon assimilation and phenology of coffee plants, (v) coffee quality attributes (evaluated by coffee bean size, biochemical compounds, and cup quality tests), (vi) breeding of new Arabica coffee F1 hybrids and Robusta clones for future agroforestry systems, and (vii) coffee production under climate change. Through this work, we begin to decipher whether shaded systems are a feasible strategy to improve the coffee crop sustainability in anticipation of challenging climate conditions. Further research is proposed for developing new coffee varieties adapted to agroforestry systems (exhibiting traits suitable for climate stressors), refining extension tools by selecting locally-adapted shade trees species and developing policy and economic incentives enabling the adoption of sustainable agroforestry practices.
Collapse
|
13
|
Ahmed S, Brinkley S, Smith E, Sela A, Theisen M, Thibodeau C, Warne T, Anderson E, Van Dusen N, Giuliano P, Ionescu KE, Cash SB. Climate Change and Coffee Quality: Systematic Review on the Effects of Environmental and Management Variation on Secondary Metabolites and Sensory Attributes of Coffea arabica and Coffea canephora. FRONTIERS IN PLANT SCIENCE 2021; 12:708013. [PMID: 34691093 PMCID: PMC8531415 DOI: 10.3389/fpls.2021.708013] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 06/09/2021] [Accepted: 09/06/2021] [Indexed: 06/13/2023]
Abstract
Climate change is impacting crop performance and agricultural systems around the world with implications for farmers and consumers. We carried out a systematic review to synthesize evidence regarding the effects of environmental factors associated with climate change and management conditions associated with climate adaptation on the crop quality of a culturally-relevant perennial crop, coffee (Coffea arabica and Coffea canephora). Seventy-three articles were identified that addressed the study's research question including 42 articles on environmental factors, 20 articles on management conditions, and 11 articles on both. While variation was found between studies, findings highlight that coffee quality is vulnerable to changes in light exposure, altitude, water stress, temperature, carbon dioxide, and nutrient management. Both increases as well as decreases were found in secondary metabolites and sensory attributes that determine coffee quality in response to shifts in environmental and management conditions. The most consistent evidence identified through this systematic review includes the following two trends: (1) increased altitude is associated with improved sensory attributes of coffee and; (2) increased light exposure is associated with decreased sensory attributes of coffee. Research gaps were found regarding the effects of shifts in carbon dioxide, water stress, and temperature on the directionality (increase, decrease, or non-linear) of coffee quality and how this varies with location, elevation, and management conditions. This systematic review further identified the following research needs: (1) long-term studies that examine the interactive effects of multiple environmental factors and management conditions on coffee quality; (2) studies that examine the interaction between sensory attributes and secondary metabolites that determine coffee quality and; (3) studies on the feasibility of various climate-adaptation strategies for mitigating the effects of climate change on coffee quality. Evidence-based innovations are needed to mitigate climate impacts on coffee quality toward enhanced sustainability and resilience of the coffee sector from farm to cup.
Collapse
Affiliation(s)
- Selena Ahmed
- Food and Health Lab, Department of Health and Human Development, Montana State University, Bozeman, MT, United States
| | - Sarah Brinkley
- Department of Horticultural Sciences, Center for Coffee Research and Education, Texas A&M University, College Station, TX, United States
| | - Erin Smith
- Food and Health Lab, Department of Health and Human Development, Montana State University, Bozeman, MT, United States
| | - Ariella Sela
- Friedman School of Nutrition Science and Policy, Tufts University, Boston, MA, United States
| | - Mitchell Theisen
- Friedman School of Nutrition Science and Policy, Tufts University, Boston, MA, United States
| | - Cyrena Thibodeau
- Friedman School of Nutrition Science and Policy, Tufts University, Boston, MA, United States
| | - Teresa Warne
- Food and Health Lab, Department of Health and Human Development, Montana State University, Bozeman, MT, United States
| | | | | | - Peter Giuliano
- Specialty Coffee Association, Santa Ana, CA, United States
- Coffee Science Foundation, Santa Ana, CA, United States
| | | | - Sean B. Cash
- Friedman School of Nutrition Science and Policy, Tufts University, Boston, MA, United States
| |
Collapse
|
14
|
Rodrigues AM, Jorge T, Osorio S, Pott DM, Lidon FC, DaMatta FM, Marques I, Ribeiro-Barros AI, Ramalho JC, António C. Primary Metabolite Profile Changes in Coffea spp. Promoted by Single and Combined Exposure to Drought and Elevated CO 2 Concentration. Metabolites 2021; 11:metabo11070427. [PMID: 34209624 PMCID: PMC8303404 DOI: 10.3390/metabo11070427] [Citation(s) in RCA: 7] [Impact Index Per Article: 2.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/17/2021] [Revised: 06/24/2021] [Accepted: 06/25/2021] [Indexed: 12/21/2022] Open
Abstract
Climate change scenarios pose major threats to many crops worldwide, including coffee. We explored the primary metabolite responses in two Coffea genotypes, C. canephora cv. Conilon Clone 153 and C. arabica cv. Icatu, grown at normal (aCO2) or elevated (eCO2) CO2 concentrations of 380 or 700 ppm, respectively, under well-watered (WW), moderate (MWD), or severe (SWD) water deficit conditions, in order to assess coffee responses to drought and how eCO2 can influence such responses. Primary metabolites were analyzed with a gas chromatography time-of-flight mass spectrometry metabolomics platform (GC-TOF-MS). A total of 48 primary metabolites were identified in both genotypes (23 amino acids and derivatives, 10 organic acids, 11 sugars, and 4 other metabolites), with differences recorded in both genotypes. Increased metabolite levels were observed in CL153 plants under single and combined conditions of aCO2 and drought (MWD and SWD), as opposed to the observed decreased levels under eCO2 in both drought conditions. In contrast, Icatu showed minor differences under MWD, and increased levels (especially amino acids) only under SWD at both CO2 concentration conditions, although with a tendency towards greater increases under eCO2. Altogether, CL153 demonstrated large impact under MWD, and seemed not to benefit from eCO2 in either MWD and SWD, in contrast with Icatu.
Collapse
Affiliation(s)
- Ana M. Rodrigues
- Plant Metabolomics Laboratory, Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa (ITQB NOVA), 2780-157 Oeiras, Portugal; (A.M.R.); (T.J.)
| | - Tiago Jorge
- Plant Metabolomics Laboratory, Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa (ITQB NOVA), 2780-157 Oeiras, Portugal; (A.M.R.); (T.J.)
| | - Sonia Osorio
- Instituto de Hortofruticultura Subtropical y Mediterránea “La Mayora”, Departamento de Biología Molecular y Bioquímica, Universidad de Málaga—Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), 29071 Málaga, Spain; (S.O.); (D.M.P.)
| | - Delphine M. Pott
- Instituto de Hortofruticultura Subtropical y Mediterránea “La Mayora”, Departamento de Biología Molecular y Bioquímica, Universidad de Málaga—Consejo Superior de Investigaciones Científicas (IHSM-UMA-CSIC), 29071 Málaga, Spain; (S.O.); (D.M.P.)
| | - Fernando C. Lidon
- GeoBioSciences, GeoTechnologies and GeoEngineering (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), 2829-516 Monte de Caparica, Portugal;
| | - Fábio M. DaMatta
- Departamento de Biologia Vegetal, Universidade Federal Viçosa (UFV), Viçosa 36570-090, Brazil;
| | - Isabel Marques
- Plant Stress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Tapada da Ajuda, 1349-017 Lisboa, Portugal;
| | - Ana I. Ribeiro-Barros
- GeoBioSciences, GeoTechnologies and GeoEngineering (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), 2829-516 Monte de Caparica, Portugal;
- Plant Stress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Tapada da Ajuda, 1349-017 Lisboa, Portugal;
- Correspondence: (A.I.R.-B.); (J.C.R.); (C.A.)
| | - José C. Ramalho
- GeoBioSciences, GeoTechnologies and GeoEngineering (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), 2829-516 Monte de Caparica, Portugal;
- Plant Stress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Tapada da Ajuda, 1349-017 Lisboa, Portugal;
- Correspondence: (A.I.R.-B.); (J.C.R.); (C.A.)
| | - Carla António
- Plant Metabolomics Laboratory, Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa (ITQB NOVA), 2780-157 Oeiras, Portugal; (A.M.R.); (T.J.)
- Correspondence: (A.I.R.-B.); (J.C.R.); (C.A.)
| |
Collapse
|
15
|
Semedo JN, Rodrigues AP, Lidon FC, Pais IP, Marques I, Gouveia D, Armengaud J, Silva MJ, Martins S, Semedo MC, Dubberstein D, Partelli FL, Reboredo FH, Scotti-Campos P, Ribeiro-Barros AI, DaMatta FM, Ramalho JC. Intrinsic non-stomatal resilience to drought of the photosynthetic apparatus in Coffea spp. is strengthened by elevated air [CO2]. TREE PHYSIOLOGY 2021; 41:708-727. [PMID: 33215189 DOI: 10.1093/treephys/tpaa158] [Citation(s) in RCA: 20] [Impact Index Per Article: 6.7] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 08/02/2020] [Accepted: 11/11/2020] [Indexed: 05/10/2023]
Abstract
Growing water restrictions associated with climate changes constitute daunting challenges to crop performance. This study unveils the impacts of moderate (MWD) or severe (SWD) water deficit, and their interaction with air [CO2], on the photosynthetic apparatus of Coffea canephora Pierre ex A. Froehner cv. Conilon Clone 153 (CL153) and Coffea arabica L. cv. Icatu. Seven year-old potted plants grown under 380 (aCO2) or 700 μl l -1 (eCO2) [CO2] gradually reached predawn water potentials between -1.6 and -2.1 MPa (MWD), and below -3.5 MPa (SWD). Under drought, stomata closure was chiefly related to abscisic acid (ABA) rise. Increasing drought severity progressively affected gas exchange and fluorescence parameters in both genotypes, with non-stomatal limitations becoming gradually dominating, especially regarding the photochemical and biochemical components of CL153 SWD plants. In contrast, Icatu plants were highly tolerant to SWD, with minor, if any, negative impacts on the potential photosynthetic functioning and components (e.g., Amax, Fv/Fm, electron carriers, photosystems (PSs) and ribulose-1,5-bisphosphate carboxylase oxygenase (RuBisCO) activities). Besides, drought-stressed Icatu plants displayed increased abundance of a large set of proteins associated with the photosynthetic apparatus (PSs, light-harvesting complexes, cyclic electron flow, RuBisCO activase) regardless of [CO2]. Single eCO2 did not promote stomatal and photosynthetic down-regulation in both genotypes. Instead, eCO2 increased photosynthetic performance, moderately reinforced photochemical (PSs activity, electron carriers) and biochemical (RuBisCO, ribulose-5-phosphate kinase) components, whereas photoprotective mechanisms and protein abundance remained mostly unaffected. In both genotypes, under MWD, eCO2 superimposition delayed stress severity and promoted photosynthetic functioning with lower energy dissipation and PSII impacts, whereas stomatal closure was decoupled from increases in ABA. In SWD plants, most impacts on the photosynthetic performance were reduced by eCO2, especially in the moderately drought affected CL153 genotype, although maintaining RuBisCO as the most sensitive component, deserving special breeder's attention to improve coffee sustainability under future climate scenarios.
Collapse
Affiliation(s)
- José N Semedo
- Unidade de Investigação em Biotecnologia e Recursos Genéticos, Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Qta. Marquês, Av. República, Oeiras 2784-505, Portugal
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, Caparica 2829-516, Portugal
| | - Ana P Rodrigues
- Plant Stress and Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. República, Oeiras 2784-505, Portugal
- Plant Stress and Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Tapada da Ajuda, Lisboa 1349-017, Portugal
| | - Fernando C Lidon
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, Caparica 2829-516, Portugal
| | - Isabel P Pais
- Unidade de Investigação em Biotecnologia e Recursos Genéticos, Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Qta. Marquês, Av. República, Oeiras 2784-505, Portugal
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, Caparica 2829-516, Portugal
| | - Isabel Marques
- Plant Stress and Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. República, Oeiras 2784-505, Portugal
- Plant Stress and Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Tapada da Ajuda, Lisboa 1349-017, Portugal
| | - Duarte Gouveia
- CEA, INRAE, Département Médicaments et Technologies pour la Santé (DMTS), SPI, Université Paris Saclay, Bagnols-sur-Cèze F-F-30200, France
| | - Jean Armengaud
- CEA, INRAE, Département Médicaments et Technologies pour la Santé (DMTS), SPI, Université Paris Saclay, Bagnols-sur-Cèze F-F-30200, France
| | - Maria J Silva
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, Caparica 2829-516, Portugal
- Plant Stress and Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. República, Oeiras 2784-505, Portugal
- Plant Stress and Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Tapada da Ajuda, Lisboa 1349-017, Portugal
| | - Sónia Martins
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, Caparica 2829-516, Portugal
- Área Departamental de Engenharia Química, Instituto Superior de Engenharia de Lisboa, Instituto Politécnico de Lisboa, R. Conselheiro Emídio Navarro 1, Lisboa 1959-007, Portugal
| | - Magda C Semedo
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, Caparica 2829-516, Portugal
- Área Departamental de Engenharia Química, Instituto Superior de Engenharia de Lisboa, Instituto Politécnico de Lisboa, R. Conselheiro Emídio Navarro 1, Lisboa 1959-007, Portugal
| | - Danielly Dubberstein
- Plant Stress and Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. República, Oeiras 2784-505, Portugal
- Departamento de Ciências Agrárias e Biológicas (DCAB), Centro Universitário do Norte do Espírito Santo (CEUNES), Universidade Federal Espírito Santo (UFES), Rod. BR 101 Norte, Km. 60, Bairro Litorâneo, São Mateu-ES, CEP 29932-540, Brazil
| | - Fábio L Partelli
- Departamento de Ciências Agrárias e Biológicas (DCAB), Centro Universitário do Norte do Espírito Santo (CEUNES), Universidade Federal Espírito Santo (UFES), Rod. BR 101 Norte, Km. 60, Bairro Litorâneo, São Mateu-ES, CEP 29932-540, Brazil
| | - Fernando H Reboredo
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, Caparica 2829-516, Portugal
| | - Paula Scotti-Campos
- Unidade de Investigação em Biotecnologia e Recursos Genéticos, Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Qta. Marquês, Av. República, Oeiras 2784-505, Portugal
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, Caparica 2829-516, Portugal
| | - Ana I Ribeiro-Barros
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, Caparica 2829-516, Portugal
- Plant Stress and Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. República, Oeiras 2784-505, Portugal
- Plant Stress and Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Tapada da Ajuda, Lisboa 1349-017, Portugal
| | - Fábio M DaMatta
- Departamento de Biologia Vegetal, Universidade Federal Viçosa, Viçosa, MG 36570-900, Brazil
| | - José C Ramalho
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Monte de Caparica, Caparica 2829-516, Portugal
- Plant Stress and Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. República, Oeiras 2784-505, Portugal
- Plant Stress and Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Tapada da Ajuda, Lisboa 1349-017, Portugal
| |
Collapse
|
16
|
Brazilian Coffee Production and the Future Microbiome and Mycotoxin Profile Considering the Climate Change Scenario. Microorganisms 2021; 9:microorganisms9040858. [PMID: 33923588 PMCID: PMC8073662 DOI: 10.3390/microorganisms9040858] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/11/2021] [Revised: 03/23/2021] [Accepted: 03/24/2021] [Indexed: 01/04/2023] Open
Abstract
Brazil holds a series of favorable climatic conditions for agricultural production including the hours and intensity of sunlight, the availability of agricultural land and water resources, as well as diverse climates, soils and biomes. Amidst such diversity, Brazilian coffee producers have obtained various standards of qualities and aromas, between the arabica and robusta species, which each present a wide variety of lineages. However, temperatures in coffee producing municipalities in Brazil have increased by about 0.25 °C per decade and annual precipitation has decreased. Therefore, the agricultural sector may face serious challenges in the upcoming decades due to crop sensitivity to water shortages and thermal stress. Furthermore, higher temperatures may reduce the quality of the culture and increase pressure from pests and diseases, reducing worldwide agricultural production. The impacts of climate change directly affect the coffee microbiota. Within the climate change scenario, aflatoxins, which are more toxic than OTA, may become dominant, promoting greater food insecurity surrounding coffee production. Thus, closer attention on the part of authorities is fundamental to stimulate replacement of areas that are apt for coffee production, in line with changes in climate zoning, in order to avoid scarcity of coffee in the world market.
Collapse
|
17
|
A Transcriptomic Approach to Understanding the Combined Impacts of Supra-Optimal Temperatures and CO 2 Revealed Different Responses in the Polyploid Coffea arabica and Its Diploid Progenitor C. canephora. Int J Mol Sci 2021; 22:ijms22063125. [PMID: 33803866 PMCID: PMC8003141 DOI: 10.3390/ijms22063125] [Citation(s) in RCA: 10] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/01/2021] [Revised: 03/03/2021] [Accepted: 03/08/2021] [Indexed: 12/13/2022] Open
Abstract
Understanding the effect of extreme temperatures and elevated air (CO2) is crucial for mitigating the impacts of the coffee industry. In this work, leaf transcriptomic changes were evaluated in the diploid C. canephora and its polyploid C. arabica, grown at 25 °C and at two supra-optimal temperatures (37 °C, 42 °C), under ambient (aCO2) or elevated air CO2 (eCO2). Both species expressed fewer genes as temperature rose, although a high number of differentially expressed genes (DEGs) were observed, especially at 42 °C. An enrichment analysis revealed that the two species reacted differently to the high temperatures but with an overall up-regulation of the photosynthetic machinery until 37 °C. Although eCO2 helped to release stress, 42 °C had a severe impact on both species. A total of 667 photosynthetic and biochemical related-DEGs were altered with high temperatures and eCO2, which may be used as key probe genes in future studies. This was mostly felt in C. arabica, where genes related to ribulose-bisphosphate carboxylase (RuBisCO) activity, chlorophyll a-b binding, and the reaction centres of photosystems I and II were down-regulated, especially under 42°C, regardless of CO2. Transcriptomic changes showed that both species were strongly affected by the highest temperature, although they can endure higher temperatures (37 °C) than previously assumed.
Collapse
|
18
|
Machado Filho JA, Rodrigues WP, Baroni DF, Pireda S, Campbell G, de Souza GAR, Verdin Filho AC, Arantes SD, de Oliveira Arantes L, da Cunha M, Gambetta GA, Rakocevic M, Ramalho JC, Campostrini E. Linking root and stem hydraulic traits to leaf physiological parameters in Coffea canephora clones with contrasting drought tolerance. JOURNAL OF PLANT PHYSIOLOGY 2021; 258-259:153355. [PMID: 33581558 DOI: 10.1016/j.jplph.2020.153355] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/18/2020] [Revised: 12/01/2020] [Accepted: 12/21/2020] [Indexed: 06/12/2023]
Abstract
Knowing the key hydraulic traits of different genotypes at early seedling stages can potentially provide crucial information and save time for breeding programs. In the current study we investigated: (1) how root, stem and whole plant conductivities are linked to xylem traits, and (2) how the integrated hydraulic system impacts leaf water potential, gas exchange, chlorophyll a fluorescence and the growth of three coffee cultivars (clones of Coffea canephora Pierre ex Froehner cv. Conilon) with known differences in drought tolerance. The Conilon clones CL 14, CL 5 V and CL 109A, classified as tolerant, moderately tolerant, and sensitive to drought respectively, were grown under non-limiting soil-water supply but high atmospheric demand (i.e., high VPDair). CL 14 and CL 5 V displayed higher root and stem hydraulic conductance and conductivity, and higher whole plant conductivity than CL 109A, and these differences were associated with higher root growth traits. In addition, CL 109A exhibited a non-significant trend towards wider vessels. Collectively, these responses likely contributed to reduce leaf water potential in CL 109A, and in turn, reduced leaf gas exchange, especially during elevated VPDair. Even when grown under well-watered conditions, the elevated VPDair observed during this study resulted in key differences in the hydraulic traits between the cultivars corresponding to differences in plant water status, gas exchange, and photochemical activity. Together these results suggest that coffee hydraulic traits, even when grown under non-water stress conditions, can be considered in breeding programs targeting more productive and efficient genotypes under drought and high atmospheric demand.
Collapse
Affiliation(s)
- José Altino Machado Filho
- Instituto Capixaba de Pesquisa, Assistência Técnica e Extensão Rural, 29052-010, Vitória, ES, Brazil
| | - Weverton Pereira Rodrigues
- Centro de Ciências Agrárias, Naturais e Letras, Universidade Estadual da Região Tocantina do Maranhão, Avenida Brejo do Pinto, S/N, 65975-000, Estreito, Maranhão, Brazil.
| | - Danilo Força Baroni
- Setor de Fisiologia Vegetal, LMGV, Centro de Ciências e Tecnologias Agropecuárias, Universidade Estadual do Norte Fluminense, Av. Alberto Lamego, 2000, CEP: 28013620, Campos dos Goytacazes, Rio de Janeiro, Brazil
| | - Saulo Pireda
- Centro de Biociências e Biotecnologia, Universidade Estadual do Norte Fluminense (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, 28013-602, Rio de Janeiro, Brazil
| | - Glaziele Campbell
- Centro de Biociências e Biotecnologia, Universidade Estadual do Norte Fluminense (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, 28013-602, Rio de Janeiro, Brazil
| | - Guilherme Augusto Rodrigues de Souza
- Setor de Fisiologia Vegetal, LMGV, Centro de Ciências e Tecnologias Agropecuárias, Universidade Estadual do Norte Fluminense, Av. Alberto Lamego, 2000, CEP: 28013620, Campos dos Goytacazes, Rio de Janeiro, Brazil
| | | | - Sara Dousseau Arantes
- Instituto Capixaba de Pesquisa, Assistência Técnica e Extensão Rural, 29052-010, Vitória, ES, Brazil
| | - Lúcio de Oliveira Arantes
- Instituto Capixaba de Pesquisa, Assistência Técnica e Extensão Rural, 29052-010, Vitória, ES, Brazil
| | - Maura da Cunha
- Centro de Biociências e Biotecnologia, Universidade Estadual do Norte Fluminense (UENF), Av. Alberto Lamego 2000, Campos dos Goytacazes, 28013-602, Rio de Janeiro, Brazil
| | - Gregory A Gambetta
- EGFV (UMR 1287), Bordeaux-Sciences Agro, INRAE, Université de Bordeaux, ISVV, 210 chemin de Leysotte, 33882 Villenave d'Ornon, France
| | - Miroslava Rakocevic
- Centro de Ciências Agrárias, Naturais e Letras, Universidade Estadual da Região Tocantina do Maranhão, Avenida Brejo do Pinto, S/N, 65975-000, Estreito, Maranhão, Brazil
| | - José Cochicho Ramalho
- Lab. Interações Planta-Ambiente & Biodiversidade (PlantStress&Biodiversity), Centro de Estudos Florestais (CEF), Departamento de Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Av. República, 2784-505, Oeiras, Portugal; GeoBioSciences, GeoTechnologies and GeoEngineering (GeoBioTec), Faculdade de Ciências Tecnologia, Universidade NOVA de Lisboa, 2829-516 Caparica, Portugal
| | - Eliemar Campostrini
- Centro de Ciências Agrárias, Naturais e Letras, Universidade Estadual da Região Tocantina do Maranhão, Avenida Brejo do Pinto, S/N, 65975-000, Estreito, Maranhão, Brazil.
| |
Collapse
|
19
|
Effect of Rice Grain ( Oryza sativa L.) Enrichment with Selenium on Foliar Leaf Gas Exchanges and Accumulation of Nutrients. PLANTS 2021; 10:plants10020288. [PMID: 33546440 PMCID: PMC7913717 DOI: 10.3390/plants10020288] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.7] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/31/2020] [Revised: 01/28/2021] [Accepted: 01/29/2021] [Indexed: 11/17/2022]
Abstract
An agronomic itinerary for Se biofortification of two rice cultivars (Ariete and Ceres) through foliar fertilization with sodium selenate and sodium selenite with different concentrations (25, 50, 75 and 100 g Se.ha-1), was implemented in experimental fields. The selenium toxicity threshold was not exceeded, as shown by the eco-physiological data obtained through leaf gas exchanges. The highest Se enrichment in paddy grains was obtained with selenite for both cultivars, especially at the highest doses, i.e., 75 and 100 g Se.ha-1, with approximately a 5.0-fold increase compared with control values. In paddy grains, Zn was the most affected element by the treatments with Se with decreases up to 54%. When comparing the losses between rough and polished grains regardless of the cultivars, Se species and concentrations, it was observed that only Cu, Mg and Zn exhibited losses <50%. The remaining elements generally had losses >70%. The loss of Se is more pronounced in Ceres cultivar than in Ariete but rarely exceeds 50%. The analysis by µ-EDXRF showed that, in Ariete cultivar, Se is mostly homogeneously distributed in the grain regardless of any treatments, while in Ceres cultivar, the Se distribution seems to favor accumulation in the periphery, perhaps in the bran.
Collapse
|
20
|
Craparo ACW, Van Asten PJA, Läderach P, Jassogne LTP, Grab SW. Warm nights drive Coffea arabica ripening in Tanzania. INTERNATIONAL JOURNAL OF BIOMETEOROLOGY 2021; 65:181-192. [PMID: 32929544 DOI: 10.1007/s00484-020-02016-6] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2020] [Revised: 08/30/2020] [Accepted: 09/02/2020] [Indexed: 06/11/2023]
Abstract
Studies have demonstrated that plant phenophases (e.g. budburst, flowering, ripening) are occurring increasingly earlier in the season across diverse ecologies globally. Despite much interest that climate change impacts have on coffee (Coffea arabica), relatively little is known about the driving factors determining its phenophases. Using high-resolution microclimatic data, this study provides initial insights on how climate change is impacting C. arabica phenophases in Tanzania. In particular, we use generalized additive models to show how warming nocturnal temperatures (Tnight), as opposed to day-time or maximum temperatures, have a superseding effect on the ripening of coffee and subsequent timing of harvest. A warm night index (WNI), generated from mean nocturnal temperature, permits accurate prediction of the start of the harvest season, which is superior to existing methods using growing degree days (GDD). The non-linear function indicates that a WNI of 15 °C is associated with the latest ripening coffee cherries (adjusted R2 = 0.95). As the WNI increases past the inflection point of ~ 16 °C, ripening occurs earlier and progresses more or less linearly at a rate of ~ 17 ± 1.95 days for every 1 °C increase in WNI. Using the WNI will thus not only allow farmers to more accurately predict their harvest start date, but also assist with identifying the most suitable adaptation strategies which may reduce harvest-related costs and buffer potential losses in quality and production.
Collapse
Affiliation(s)
- A C W Craparo
- International Center for Tropical Agriculture (CIAT), Hanoi, Vietnam.
- School of Geography, Archaeology and Environmental Studies, University of the Witwatersrand, P/Bag3, WITS, Johannesburg, 2050, South Africa.
| | | | - P Läderach
- International Center for Tropical Agriculture (CIAT), Rome, Italy
| | - L T P Jassogne
- International Institute of Tropical Agriculture (IITA), Kampala, Uganda
| | - S W Grab
- School of Geography, Archaeology and Environmental Studies, University of the Witwatersrand, P/Bag3, WITS, Johannesburg, 2050, South Africa
| |
Collapse
|
21
|
Luís IC, Lidon FC, Pessoa CC, Marques AC, Coelho ARF, Simões M, Patanita M, Dôres J, Ramalho JC, Silva MM, Almeida AS, Pais IP, Pessoa MF, Reboredo FH, Legoinha P, Guerra M, Leitão RG, Campos PS. Zinc Enrichment in two Contrasting Genotypes of Triticum aestivum L. Grains: Interactions between Edaphic Conditions and Foliar Fertilizers. PLANTS (BASEL, SWITZERLAND) 2021; 10:204. [PMID: 33494526 PMCID: PMC7910929 DOI: 10.3390/plants10020204] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/27/2020] [Revised: 01/15/2021] [Accepted: 01/18/2021] [Indexed: 11/16/2022]
Abstract
This study aimed to assess the implications of Zn enrichment in wheat grains as a function of contrasting genotypes, edaphic conditions and foliar fertilizers. Triticum aestivum L. varieties Roxo and Paiva were grown in four production fields, and sprayed with ZnSO4 (0, 16.20 and 36.40 kg/ha) Zn-EDTA (0, 6.30 and 12.60 kg/ha) and Tecnifol Zinc (0, 3.90 and 7.80 kg/ha). The heterogeneous edaphic conditions of the wheat fields were chemically characterized, it being found that soil properties determine different Zn accumulation in the grains of both genotypes. Foliar spraying enhanced to different extents Zn content in the grains of both genotypes, but the average of enrichment indexes varied among the wheat fields. Zinc mostly accumulated in the embryo and vascular bundle and to a lesser extent in the endosperm. Grain yield and test weight sprayed by ZnSO4 gave the highest values in both genotypes, but the opposite was found for Zn-EDTA. Considering the color parameters, lightness and red-green transitions were found to be a conjunction of genotype characteristics, fertilization types and edaphic conditions prevailing in each field. It is concluded that the index of Zn enrichment in wheat grains is a docket of edaphic conditions, genotype and type of fertilization.
Collapse
Affiliation(s)
- Inês Carmo Luís
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (F.C.L.); (C.C.P.); (A.C.M.); (A.R.F.C.); (M.S.); (M.F.P.); (F.H.R.); (P.L.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.P.); (J.C.R.); (M.M.S.); (A.S.A.); (I.P.P.); (P.S.C.)
| | - Fernando C. Lidon
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (F.C.L.); (C.C.P.); (A.C.M.); (A.R.F.C.); (M.S.); (M.F.P.); (F.H.R.); (P.L.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.P.); (J.C.R.); (M.M.S.); (A.S.A.); (I.P.P.); (P.S.C.)
| | - Cláudia Campos Pessoa
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (F.C.L.); (C.C.P.); (A.C.M.); (A.R.F.C.); (M.S.); (M.F.P.); (F.H.R.); (P.L.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.P.); (J.C.R.); (M.M.S.); (A.S.A.); (I.P.P.); (P.S.C.)
| | - Ana Coelho Marques
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (F.C.L.); (C.C.P.); (A.C.M.); (A.R.F.C.); (M.S.); (M.F.P.); (F.H.R.); (P.L.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.P.); (J.C.R.); (M.M.S.); (A.S.A.); (I.P.P.); (P.S.C.)
| | - Ana Rita F. Coelho
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (F.C.L.); (C.C.P.); (A.C.M.); (A.R.F.C.); (M.S.); (M.F.P.); (F.H.R.); (P.L.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.P.); (J.C.R.); (M.M.S.); (A.S.A.); (I.P.P.); (P.S.C.)
| | - Manuela Simões
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (F.C.L.); (C.C.P.); (A.C.M.); (A.R.F.C.); (M.S.); (M.F.P.); (F.H.R.); (P.L.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.P.); (J.C.R.); (M.M.S.); (A.S.A.); (I.P.P.); (P.S.C.)
| | - Manuel Patanita
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.P.); (J.C.R.); (M.M.S.); (A.S.A.); (I.P.P.); (P.S.C.)
- Escola Superior Agrária, Instituto Politécnico de Beja, R. Pedro Soares S/N, 7800-295 Beja, Portugal;
| | - José Dôres
- Escola Superior Agrária, Instituto Politécnico de Beja, R. Pedro Soares S/N, 7800-295 Beja, Portugal;
| | - José C. Ramalho
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.P.); (J.C.R.); (M.M.S.); (A.S.A.); (I.P.P.); (P.S.C.)
- PlantStress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. República, 2784-505 Oeiras, Portugal
| | - Maria Manuela Silva
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.P.); (J.C.R.); (M.M.S.); (A.S.A.); (I.P.P.); (P.S.C.)
- ESEAG-COFAC, Avenida do Campo Grande 376, 1749-024 Lisboa, Portugal
| | - Ana Sofia Almeida
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.P.); (J.C.R.); (M.M.S.); (A.S.A.); (I.P.P.); (P.S.C.)
- Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Estrada de Gil Vaz 6, 7351-901 Elvas, Portugal
| | - Isabel P. Pais
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.P.); (J.C.R.); (M.M.S.); (A.S.A.); (I.P.P.); (P.S.C.)
- Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Avenida da República, Quinta do Marquês, 2780-157 Oeiras, Portugal
| | - Maria Fernanda Pessoa
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (F.C.L.); (C.C.P.); (A.C.M.); (A.R.F.C.); (M.S.); (M.F.P.); (F.H.R.); (P.L.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.P.); (J.C.R.); (M.M.S.); (A.S.A.); (I.P.P.); (P.S.C.)
| | - Fernando Henrique Reboredo
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (F.C.L.); (C.C.P.); (A.C.M.); (A.R.F.C.); (M.S.); (M.F.P.); (F.H.R.); (P.L.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.P.); (J.C.R.); (M.M.S.); (A.S.A.); (I.P.P.); (P.S.C.)
| | - Paulo Legoinha
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (F.C.L.); (C.C.P.); (A.C.M.); (A.R.F.C.); (M.S.); (M.F.P.); (F.H.R.); (P.L.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.P.); (J.C.R.); (M.M.S.); (A.S.A.); (I.P.P.); (P.S.C.)
| | - Mauro Guerra
- LIBPhys-UNL, Physics Department, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.G.); (R.G.L.)
| | - Roberta G. Leitão
- LIBPhys-UNL, Physics Department, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.G.); (R.G.L.)
| | - Paula Scotti Campos
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Campus da Caparica, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal; (M.P.); (J.C.R.); (M.M.S.); (A.S.A.); (I.P.P.); (P.S.C.)
- Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Avenida da República, Quinta do Marquês, 2780-157 Oeiras, Portugal
| |
Collapse
|
22
|
Marcheafave GG, Tormena CD, Mattos LE, Liberatti VR, Ferrari ABS, Rakocevic M, Bruns RE, Scarminio IS, Pauli ED. The main effects of elevated CO 2 and soil-water deficiency on 1H NMR-based metabolic fingerprints of Coffea arabica beans by factorial and mixture design. THE SCIENCE OF THE TOTAL ENVIRONMENT 2020; 749:142350. [PMID: 33370915 DOI: 10.1016/j.scitotenv.2020.142350] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/01/2020] [Revised: 08/20/2020] [Accepted: 09/09/2020] [Indexed: 06/12/2023]
Abstract
The metabolic response of Coffea arabica trees in the face of the rising atmospheric concentration of carbon dioxide (CO2) combined with the reduction in soil-water availability is complex due to the various (bio)chemical feedbacks. Modern analytical tools and the experimental advance of agronomic science tend to advance in the understanding of the metabolic complexity of plants. In this work, Coffea arabica trees were grown in a Free-Air Carbon Dioxide Enrichment dispositive under factorial design (22) conditions considering two CO2 levels and two soil-water availabilities. The 1H NMR mixture design-fingerprinting effects of CO2 and soil-water levels on beans were strategically investigated using the principal component analysis (PCA), analysis of variance (ANOVA) - simultaneous component analysis (ASCA) and partial least squares-discriminant analysis (PLS-DA). From the ASCA, the CO2 factor had a significant effect on changing the 1H NMR profile of fingerprints. The soil-water factor and interaction (CO2 × soil-water) were not significant. 1H NMR fingerprints with PCA, ASCA and PLS-DA analysis determined spectral profiles for fatty acids, caffeine, trigonelline and glucose increases in beans from current CO2, while quinic acid/chlorogenic acids, malic acid and kahweol/cafestol increased in coffee beans from elevated CO2. PLS-DA results revealed a good classification performance between the significant effect of the atmospheric CO2 levels on the fingerprints, regardless of the soil-water availabilities. Finally, the PLS-DA model showed good prediction ability, successfully classifying validation data-set of coffee beans collected over the vertical profile of the plants and included several fingerprints of different extracting solvents. The results of this investigation suggest that the association of experimental design, mixture design, PCA, ASCA and PLS-DA can provide accurate information on a series of metabolic changes provoked by climate changes in products of commercial importance, in addition to minimizing the extra work necessary in classic analytical approaches, encouraging the development of similar strategies.
Collapse
Affiliation(s)
- Gustavo Galo Marcheafave
- Laboratory of Chemometrics in Natural Sciences (LQCN), Department of Chemistry, State University of Londrina, CP 6001, 86051-990 Londrina, PR, Brazil.
| | - Cláudia Domiciano Tormena
- Laboratory of Chemometrics in Natural Sciences (LQCN), Department of Chemistry, State University of Londrina, CP 6001, 86051-990 Londrina, PR, Brazil
| | - Lavínia Eduarda Mattos
- Laboratory of Chemometrics in Natural Sciences (LQCN), Department of Chemistry, State University of Londrina, CP 6001, 86051-990 Londrina, PR, Brazil
| | - Vanessa Rocha Liberatti
- Department of Chemistry, State University of Londrina, CP 6001, 86051-990 Londrina, PR, Brazil
| | | | - Miroslava Rakocevic
- Northern Rio de Janeiro State University - UENF, Plant Physiology Lab, Av. Alberto Lamego 2000, 28013-602 Campos dos Goytacazes, RJ, Brazil; Embrapa Environment, Rodovia SP 340, Km 127.5, 13820-000 Jaguariúna, SP, Brazil
| | - Roy Edward Bruns
- Institute of Chemistry, State University of Campinas, CP 6154, 13083-970 Campinas, SP, Brazil
| | - Ieda Spacino Scarminio
- Laboratory of Chemometrics in Natural Sciences (LQCN), Department of Chemistry, State University of Londrina, CP 6001, 86051-990 Londrina, PR, Brazil.
| | - Elis Daiane Pauli
- Institute of Chemistry, State University of Campinas, CP 6154, 13083-970 Campinas, SP, Brazil
| |
Collapse
|
23
|
Marques I, Fernandes I, David PH, Paulo OS, Goulao LF, Fortunato AS, Lidon FC, DaMatta FM, Ramalho JC, Ribeiro-Barros AI. Transcriptomic Leaf Profiling Reveals Differential Responses of the Two Most Traded Coffee Species to Elevated [CO 2]. Int J Mol Sci 2020; 21:ijms21239211. [PMID: 33287164 PMCID: PMC7730880 DOI: 10.3390/ijms21239211] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/10/2020] [Revised: 11/26/2020] [Accepted: 11/27/2020] [Indexed: 02/06/2023] Open
Abstract
As atmospheric [CO2] continues to rise to unprecedented levels, understanding its impact on plants is imperative to improve crop performance and sustainability under future climate conditions. In this context, transcriptional changes promoted by elevated CO2 (eCO2) were studied in genotypes from the two major traded coffee species: the allopolyploid Coffea arabica (Icatu) and its diploid parent, C. canephora (CL153). While Icatu expressed more genes than CL153, a higher number of differentially expressed genes were found in CL153 as a response to eCO2. Although many genes were found to be commonly expressed by the two genotypes under eCO2, unique genes and pathways differed between them, with CL153 showing more enriched GO terms and metabolic pathways than Icatu. Divergent functional categories and significantly enriched pathways were found in these genotypes, which altogether supports contrasting responses to eCO2. A considerable number of genes linked to coffee physiological and biochemical responses were found to be affected by eCO2 with the significant upregulation of photosynthetic, antioxidant, and lipidic genes. This supports the absence of photosynthesis down-regulation and, therefore, the maintenance of increased photosynthetic potential promoted by eCO2 in these coffee genotypes.
Collapse
Affiliation(s)
- Isabel Marques
- Plant-Environment Interactions and Biodiversity Lab (PlantStress & Biodiversity), Forest Research Centre (CEF), Instituto Superior de Agronomia (ISA), Universidade de Lisboa, 2784-505 Oeiras and Tapada da Ajuda, 1349-017 Lisboa, Portugal
- Computational Biology and Population Genomics Group, Centre for Ecology, Evolution and Environmental Changes (cE3c), Faculdade de Ciências, Universidade de Lisboa, 1749-016 Lisboa, Portugal; (I.F.); (P.H.D.); (O.S.P.)
- Correspondence: (I.M.); (J.C.R.); (A.I.R.-B.)
| | - Isabel Fernandes
- Computational Biology and Population Genomics Group, Centre for Ecology, Evolution and Environmental Changes (cE3c), Faculdade de Ciências, Universidade de Lisboa, 1749-016 Lisboa, Portugal; (I.F.); (P.H.D.); (O.S.P.)
| | - Pedro H.C. David
- Computational Biology and Population Genomics Group, Centre for Ecology, Evolution and Environmental Changes (cE3c), Faculdade de Ciências, Universidade de Lisboa, 1749-016 Lisboa, Portugal; (I.F.); (P.H.D.); (O.S.P.)
| | - Octávio S. Paulo
- Computational Biology and Population Genomics Group, Centre for Ecology, Evolution and Environmental Changes (cE3c), Faculdade de Ciências, Universidade de Lisboa, 1749-016 Lisboa, Portugal; (I.F.); (P.H.D.); (O.S.P.)
| | - Luis F. Goulao
- Linking Landscape, Environment, Agriculture and Food (LEAF), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Tapada da Ajuda, 1349-017 Lisboa, Portugal;
| | - Ana S. Fortunato
- GREEN-IT—Bioresources for Sustainability, Instituto de Tecnologia Química e Biológica António Xavier (ITQB), Universidade NOVA de Lisboa (UNL), Av. da República, 2780-157 Oeiras, Portugal;
| | - Fernando C. Lidon
- GeoBioSciences, GeoTechnologies and GeoEngineering (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), 2829-516 Monte de Caparica, Portugal;
| | - Fábio M. DaMatta
- Departamento de Biologia Vegetal, Universidade Federal Viçosa (UFV), Viçosa 36570-900 (MG), Brazil;
| | - José C. Ramalho
- Plant-Environment Interactions and Biodiversity Lab (PlantStress & Biodiversity), Forest Research Centre (CEF), Instituto Superior de Agronomia (ISA), Universidade de Lisboa, 2784-505 Oeiras and Tapada da Ajuda, 1349-017 Lisboa, Portugal
- GeoBioSciences, GeoTechnologies and GeoEngineering (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), 2829-516 Monte de Caparica, Portugal;
- Correspondence: (I.M.); (J.C.R.); (A.I.R.-B.)
| | - Ana I. Ribeiro-Barros
- Plant-Environment Interactions and Biodiversity Lab (PlantStress & Biodiversity), Forest Research Centre (CEF), Instituto Superior de Agronomia (ISA), Universidade de Lisboa, 2784-505 Oeiras and Tapada da Ajuda, 1349-017 Lisboa, Portugal
- GeoBioSciences, GeoTechnologies and GeoEngineering (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), 2829-516 Monte de Caparica, Portugal;
- Correspondence: (I.M.); (J.C.R.); (A.I.R.-B.)
| |
Collapse
|
24
|
Effects of Elevated Carbon Dioxide and Chronic Warming on Nitrogen (N)-Uptake Rate, -Assimilation, and -Concentration of Wheat. PLANTS 2020; 9:plants9121689. [PMID: 33271885 PMCID: PMC7760685 DOI: 10.3390/plants9121689] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 10/11/2020] [Revised: 11/17/2020] [Accepted: 11/26/2020] [Indexed: 11/17/2022]
Abstract
The concentration of nitrogen (N) in vegetative tissues is largely dependent on the balance among growth, root N uptake, and N assimilation. Elevated CO2 (eCO2) plus warming is likely to affect the vegetative-tissue N and protein concentration of wheat by altering N metabolism, but this is poorly understood. To investigate this, spring wheat (Triticum aestivum) was grown for three weeks at two levels of CO2 (400 or 700 ppm) and two temperature regimes (26/21 or 31/26 °C, day/night). Plant dry mass, plant %N, protein concentrations, NO3− and NH4+ root uptake rates (using 15NO3 or 15NH4), and whole-plant N- and NO3--assimilation were measured. Plant growth, %N, protein concentration, and root N-uptake rate were each significantly affected only by CO2, while N- and NO3−-assimilation were significantly affected only by temperature. However, plants grown at eCO2 plus warming had the lowest concentrations of N and protein. These results suggest that one strategy breeding programs can implement to minimize the negative effects of eCO2 and warming on wheat tissue N would be to target the maintenance of root N uptake rate at eCO2 and N assimilation at higher growth temperatures.
Collapse
|
25
|
Marques AC, Lidon FC, Coelho ARF, Pessoa CC, Luís IC, Scotti-Campos P, Simões M, Almeida AS, Legoinha P, Pessoa MF, Galhano C, Guerra MAM, Leitão RG, Ramalho JC, Semedo JMN, Bagulho A, Moreira J, Rodrigues AP, Marques P, Silva C, Ribeiro-Barros A, Silva MJ, Silva MM, Oliveira K, Ferreira D, Pais IP, Reboredo FH. Quantification and Tissue Localization of Selenium in Rice ( Oryza sativa L., Poaceae) Grains: A Perspective of Agronomic Biofortification. PLANTS 2020; 9:plants9121670. [PMID: 33260543 PMCID: PMC7760205 DOI: 10.3390/plants9121670] [Citation(s) in RCA: 13] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 11/06/2020] [Revised: 11/25/2020] [Accepted: 11/26/2020] [Indexed: 02/06/2023]
Abstract
In worldwide production, rice is the second-most-grown crop. It is considered a staple food for many populations and, if naturally enriched in Se, has a huge potential to reduce nutrient deficiencies in foodstuff for human consumption. This study aimed to develop an agronomic itinerary for Se biofortification of Oryza sativa L. (Poaceae) and assess potential physicochemical deviations. Trials were implemented in rice paddy field with known soil and water characteristics and two genotypes resulting from genetic breeding (OP1505 and OP1509) were selected for evaluation. Plants were sprayed at booting, anthesis and milky grain phases with two different foliar fertilizers (sodium selenate and sodium selenite) at different concentrations (25, 50, 75 and 100 g Se·ha−1). After grain harvesting, the application of selenate showed 4.9–7.1 fold increases, whereas selenite increased 5.9–8.4-fold in OP1509 and OP1505, respectively. In brown grain, it was found that in the highest treatment selenate or selenite triggered much higher Se accumulation in OP1505 relatively to OP1509, and that no relevant variation was found with selenate or selenite spraying in each genotype. Total protein increased exponentially in OP1505 genotype when selenite was applied, and higher dosage of Se also increased grain weight and total protein content. It was concluded that, through agronomic biofortification, rice grain can be enriched with Se without impairing its quality, thus highlighting its value in general for the industry and consumers with special needs.
Collapse
Affiliation(s)
- Ana Coelho Marques
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (F.C.L.); (A.R.F.C.); (C.C.P.); (I.C.L.); (M.S.); (P.L.); (M.F.P.); (C.G.); (D.F.); (F.H.R.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
- Correspondence:
| | - Fernando C. Lidon
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (F.C.L.); (A.R.F.C.); (C.C.P.); (I.C.L.); (M.S.); (P.L.); (M.F.P.); (C.G.); (D.F.); (F.H.R.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
| | - Ana Rita F. Coelho
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (F.C.L.); (A.R.F.C.); (C.C.P.); (I.C.L.); (M.S.); (P.L.); (M.F.P.); (C.G.); (D.F.); (F.H.R.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
| | - Cláudia Campos Pessoa
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (F.C.L.); (A.R.F.C.); (C.C.P.); (I.C.L.); (M.S.); (P.L.); (M.F.P.); (C.G.); (D.F.); (F.H.R.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
| | - Inês Carmo Luís
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (F.C.L.); (A.R.F.C.); (C.C.P.); (I.C.L.); (M.S.); (P.L.); (M.F.P.); (C.G.); (D.F.); (F.H.R.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
| | - Paula Scotti-Campos
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
- Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Avenida da República, Quinta do Marquês, 2780-157 Oeiras, Portugal;
| | - Manuela Simões
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (F.C.L.); (A.R.F.C.); (C.C.P.); (I.C.L.); (M.S.); (P.L.); (M.F.P.); (C.G.); (D.F.); (F.H.R.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
| | - Ana Sofia Almeida
- Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Avenida da República, Quinta do Marquês, 2780-157 Oeiras, Portugal;
| | - Paulo Legoinha
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (F.C.L.); (A.R.F.C.); (C.C.P.); (I.C.L.); (M.S.); (P.L.); (M.F.P.); (C.G.); (D.F.); (F.H.R.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
| | - Maria Fernanda Pessoa
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (F.C.L.); (A.R.F.C.); (C.C.P.); (I.C.L.); (M.S.); (P.L.); (M.F.P.); (C.G.); (D.F.); (F.H.R.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
| | - Carlos Galhano
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (F.C.L.); (A.R.F.C.); (C.C.P.); (I.C.L.); (M.S.); (P.L.); (M.F.P.); (C.G.); (D.F.); (F.H.R.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
| | - Mauro A. M. Guerra
- LIBPhys, Physics Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (M.A.M.G.); (R.G.L.)
| | - Roberta G. Leitão
- LIBPhys, Physics Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (M.A.M.G.); (R.G.L.)
| | - José C. Ramalho
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
- PlantStress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. República, 1349-017 Lisboa, Portugal;
| | - José Manuel N. Semedo
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
- Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Avenida da República, Quinta do Marquês, 2780-157 Oeiras, Portugal;
| | - Ana Bagulho
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
- Instituto Nacional de Investigação Agrária e Veterinária, I. P. (INIAV), Estrada de Gil Vaz 6, 7351-901 Elvas, Portugal
| | - José Moreira
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
- Instituto Nacional de Investigação Agrária e Veterinária, I. P. (INIAV), Estrada de Gil Vaz 6, 7351-901 Elvas, Portugal
| | - Ana Paula Rodrigues
- PlantStress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. República, 1349-017 Lisboa, Portugal;
| | - Paula Marques
- Centro Operativo e Tecnológico do Arroz (COTARROZ), 2120-014 Salvaterra de Magos, Portugal; (P.M.); (C.S.)
| | - Cátia Silva
- Centro Operativo e Tecnológico do Arroz (COTARROZ), 2120-014 Salvaterra de Magos, Portugal; (P.M.); (C.S.)
| | - Ana Ribeiro-Barros
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
- PlantStress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. República, 1349-017 Lisboa, Portugal;
| | - Maria José Silva
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
- PlantStress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Instituto Superior Agronomia (ISA), Universidade de Lisboa (ULisboa), Quinta do Marquês, Av. República, 1349-017 Lisboa, Portugal;
| | - Maria Manuela Silva
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
- ESEAG-COFAC, Avenida do Campo Grande 376, 1749-024 Lisboa, Portugal
| | - Karliana Oliveira
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
- Instituto Politécnico de Beja (IPBeja), 7800-295 Beja, Portugal
| | - David Ferreira
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (F.C.L.); (A.R.F.C.); (C.C.P.); (I.C.L.); (M.S.); (P.L.); (M.F.P.); (C.G.); (D.F.); (F.H.R.)
| | - Isabel P. Pais
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
- Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Avenida da República, Quinta do Marquês, 2780-157 Oeiras, Portugal;
| | - Fernando Henrique Reboredo
- Earth Sciences Department, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (F.C.L.); (A.R.F.C.); (C.C.P.); (I.C.L.); (M.S.); (P.L.); (M.F.P.); (C.G.); (D.F.); (F.H.R.)
- GeoBioTec Research Center, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, Campus da Caparica, 2829-516 Caparica, Portugal; (P.S.-C.); (J.C.R.); (J.M.N.S.); (A.B.); (J.M.); (A.R.-B.); (M.J.S.); (M.M.S.); (K.O.); (I.P.P.)
| |
Collapse
|
26
|
Dubberstein D, Lidon FC, Rodrigues AP, Semedo JN, Marques I, Rodrigues WP, Gouveia D, Armengaud J, Semedo MC, Martins S, Simões-Costa MC, Moura I, Pais IP, Scotti-Campos P, Partelli FL, Campostrini E, Ribeiro-Barros AI, DaMatta FM, Ramalho JC. Resilient and Sensitive Key Points of the Photosynthetic Machinery of Coffea spp. to the Single and Superimposed Exposure to Severe Drought and Heat Stresses. FRONTIERS IN PLANT SCIENCE 2020; 11:1049. [PMID: 32733525 PMCID: PMC7363965 DOI: 10.3389/fpls.2020.01049] [Citation(s) in RCA: 14] [Impact Index Per Article: 3.5] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/28/2020] [Accepted: 06/25/2020] [Indexed: 05/23/2023]
Abstract
This study unveils the single and combined drought and heat impacts on the photosynthetic performance of Coffea arabica cv. Icatu and C. canephora cv. Conilon Clone 153 (CL153). Well-watered (WW) potted plants were gradually submitted to severe water deficit (SWD) along 20 days under adequate temperature (25/20°C, day/night), and thereafter exposed to a gradual temperature rise up to 42/30°C, followed by a 14-day water and temperature recovery. Single drought affected all gas exchanges (including Amax ) and most fluorescence parameters in both genotypes. However, Icatu maintained Fv/Fm and RuBisCO activity, and reinforced electron transport rates, carrier contents, and proton gradient regulation (PGR5) and chloroplast NADH dehydrogenase-like (NDH) complex proteins abundance. This suggested negligible non-stomatal limitations of photosynthesis that were accompanied by a triggering of protective cyclic electron transport (CEF) involving both photosystems (PSs). These findings contrasted with declines in RuBisCO and PSs activities, and cytochromes (b559 , f, b563 ) contents in CL153. Remarkable heat tolerance in potential photosynthetic functioning was detected in WW plants of both genotypes (up to 37/28°C or 39/30°C), likely associated with CEF in Icatu. Yet, at 42/30°C the tolerance limit was exceeded. Reduced Amax and increased Ci values reflected non-stomatal limitations of photosynthesis, agreeing with impairments in energy capture (F0 rise), PSII photochemical efficiency, and RuBisCO and Ru5PK activities. In contrast to PSs activities and electron carrier contents, enzyme activities were highly heat sensitive. Until 37/28°C, stresses interaction was largely absent, and drought played the major role in constraining photosynthesis functioning. Harsher conditions (SWD, 42/30°C) exacerbated impairments to PSs, enzymes, and electron carriers, but uncontrolled energy dissipation was mitigated by photoprotective mechanisms. Most parameters recovered fully between 4 and 14 days after stress relief in both genotypes, although some aftereffects persisted in SWD plants. Icatu was more drought tolerant, with WW and SWD plants usually showing a faster and/or greater recovery than CL153. Heat affected both genotypes mostly at 42/30°C, especially in SWD and Icatu plants. Overall, photochemical components were highly tolerant to heat and to stress interaction in contrast to enzymes that deserve special attention by breeding programs to increase coffee sustainability in climate change scenarios.
Collapse
Affiliation(s)
- Danielly Dubberstein
- PlantStress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Lisbon, Portugal
- Centro Univ. Norte do Espírito Santo (CEUNES), Dept. Ciências Agrárias e Biológicas (DCAB), Univ. Federal Espírito Santo (UFES), São Mateus, Brazil
| | - Fernando C. Lidon
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Caparica, Portugal
| | - Ana P. Rodrigues
- PlantStress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Lisbon, Portugal
| | - José N. Semedo
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Caparica, Portugal
- Unid. Investigação em Biotecnologia e Recursos Genéticos, Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Oeiras, Portugal
| | - Isabel Marques
- PlantStress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Lisbon, Portugal
| | - Weverton P. Rodrigues
- Setor Fisiologia Vegetal, Centro de Ciências e Tecnologias Agropecuárias, Univ. Estadual Norte Fluminense (UENF), Darcy Ribeiro, Brazil
- Centro de Ciências Agrárias, Naturais e Letras, Universidade Estadual da Região Tocantina do Maranhão, Estreito, Brazil
| | - Duarte Gouveia
- Laboratoire Innovations technologiques pour la Détection et le Diagnostic (Li2D), Service de Pharmacologie et Immunoanalyse (SPI), CEA, INRA, Bagnols-sur-Cèze, France
| | - Jean Armengaud
- Laboratoire Innovations technologiques pour la Détection et le Diagnostic (Li2D), Service de Pharmacologie et Immunoanalyse (SPI), CEA, INRA, Bagnols-sur-Cèze, France
| | - Magda C. Semedo
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Caparica, Portugal
- Área Departamental de Engenharia Química, Instituto Superior de Engenharia de Lisboa, Instituto Politécnico de Lisboa, Lisboa, Portugal
| | - Sónia Martins
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Caparica, Portugal
- Área Departamental de Engenharia Química, Instituto Superior de Engenharia de Lisboa, Instituto Politécnico de Lisboa, Lisboa, Portugal
| | - Maria C. Simões-Costa
- PlantStress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Lisbon, Portugal
| | - I. Moura
- PlantStress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Lisbon, Portugal
| | - Isabel P. Pais
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Caparica, Portugal
- Unid. Investigação em Biotecnologia e Recursos Genéticos, Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Oeiras, Portugal
| | - Paula Scotti-Campos
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Caparica, Portugal
- Unid. Investigação em Biotecnologia e Recursos Genéticos, Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Oeiras, Portugal
| | - Fábio L. Partelli
- Centro Univ. Norte do Espírito Santo (CEUNES), Dept. Ciências Agrárias e Biológicas (DCAB), Univ. Federal Espírito Santo (UFES), São Mateus, Brazil
| | - Eliemar Campostrini
- Setor Fisiologia Vegetal, Centro de Ciências e Tecnologias Agropecuárias, Univ. Estadual Norte Fluminense (UENF), Darcy Ribeiro, Brazil
| | - Ana I. Ribeiro-Barros
- PlantStress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Lisbon, Portugal
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Caparica, Portugal
| | - Fábio M. DaMatta
- Dept. Biologia Vegetal, Univ. Federal Viçosa (UFV), Viçosa, Brazil
| | - José C. Ramalho
- PlantStress & Biodiversity Lab, Centro de Estudos Florestais (CEF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Lisbon, Portugal
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências e Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Caparica, Portugal
| |
Collapse
|
27
|
Cheng B, Smyth HE, Furtado A, Henry RJ. Slower development of lower canopy beans produces better coffee. JOURNAL OF EXPERIMENTAL BOTANY 2020; 71:4201-4214. [PMID: 32206798 PMCID: PMC7337091 DOI: 10.1093/jxb/eraa151] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 12/18/2019] [Accepted: 03/19/2020] [Indexed: 06/10/2023]
Abstract
The production of high-quality coffee is being challenged by changing climates in coffee-growing regions. The coffee beans from the upper and lower canopy at different development stages of the same plants were analyzed to investigate the impact of the microenvironment on gene expression and coffee quality. Compared with coffee beans from the upper canopy, lower canopy beans displayed more intense aroma with higher caffeine, trigonelline, and sucrose contents, associated with greater gene expression in the representative metabolic pathways. Global gene expression indicated a longer ripening in the lower canopy, resulting from higher expression of genes relating to growth inhibition and suppression of chlorophyll degradation during early bean ripening. Selection of genotypes or environments that enhance expression of the genes slowing bean development may produce higher quality coffee beans, allowing coffee production in a broader range of available future environments.
Collapse
Affiliation(s)
- Bing Cheng
- Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, St Lucia, QLD, Australia
| | - Heather E Smyth
- Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, St Lucia, QLD, Australia
| | - Agnelo Furtado
- Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, St Lucia, QLD, Australia
| | - Robert J Henry
- Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, St Lucia, QLD, Australia
| |
Collapse
|
28
|
Vega FE, Ziska LH, Simpkins A, Infante F, Davis AP, Rivera JA, Barnaby JY, Wolf J. Early growth phase and caffeine content response to recent and projected increases in atmospheric carbon dioxide in coffee (Coffea arabica and C. canephora). Sci Rep 2020; 10:5875. [PMID: 32246092 PMCID: PMC7125137 DOI: 10.1038/s41598-020-62818-x] [Citation(s) in RCA: 8] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/06/2019] [Accepted: 03/16/2020] [Indexed: 11/27/2022] Open
Abstract
While [CO2] effects on growth and secondary chemistry are well characterized for annual plant species, little is known about perennials. Among perennials, production of Coffea arabica and C. canephora (robusta) have enormous economic importance worldwide. Three Arabica cultivars (Bourbon, Catimor, Typica) and robusta coffee were grown from germination to ca. 12 months at four CO2 concentrations: 300, 400, 500 or 600 ppm. There were significant increases in all leaf area and biomass markers in response to [CO2] with significant [CO2] by taxa differences beginning at 122-124 days after sowing (DAS). At 366-368 DAS, CO2 by cultivar variation in growth and biomass response among Arabica cultivars was not significant; however, significant trends in leaf area, branch number and total above-ground biomass were observed between Arabica and robusta. For caffeine concentration, there were significant differences in [CO2] response between Arabica and robusta. A reduction in caffeine in coffee leaves and seeds might result in decreased ability against deterrence, and consequently, an increase in pest pressure. We suggest that the interspecific differences observed (robusta vs. Arabica) may be due to differences in ploidy level (2n = 22 vs. 2n = 4x = 44). Differential quantitative and qualitative responses during early growth and development of Arabica and robusta may have already occurred with recent [CO2] increases, and such differences may be exacerbated, with production and quality consequences, as [CO2] continues to increase.
Collapse
Affiliation(s)
- Fernando E Vega
- Sustainable Perennial Crops Laboratory, U. S. Department of Agriculture, Agricultural Research Service, Beltsville, MD, 20705, USA.
| | - Lewis H Ziska
- Adaptive Cropping Systems Laboratory, U. S. Department of Agriculture, Agricultural Research Service, Beltsville, MD, 20705, USA
- Environmental Health Sciences, Mailman School of Public Health, Columbia University, New York, NY, 10032, USA
| | - Ann Simpkins
- Sustainable Perennial Crops Laboratory, U. S. Department of Agriculture, Agricultural Research Service, Beltsville, MD, 20705, USA
| | | | | | | | - Jinyoung Y Barnaby
- Dale Bumpers National Rice Research Center, U. S. Department of Agriculture, Agricultural Research Service, Stuttgart, AR, 72160, USA
| | - Julie Wolf
- Adaptive Cropping Systems Laboratory, U. S. Department of Agriculture, Agricultural Research Service, Beltsville, MD, 20705, USA
| |
Collapse
|
29
|
Marcheafave GG, Pauli ED, Tormena CD, Ortiz MCV, de Almeida AG, Rakocevic M, Bruns RE, Scarminio IS. Factorial design fingerprint discrimination of Coffea arabica beans under elevated carbon dioxide and limited water conditions. Talanta 2020; 209:120591. [DOI: 10.1016/j.talanta.2019.120591] [Citation(s) in RCA: 7] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/08/2019] [Revised: 10/28/2019] [Accepted: 11/23/2019] [Indexed: 10/25/2022]
|
30
|
Marcheafave GG, Pauli ED, Tormena CD, Mattos LE, de Almeida AG, Rakocevic M, Bruns RE, Scarminio IS. Irrigated and CO2 level effects on metabolism in Coffea arabica beans from mixture design – near infrared fingerprints. Microchem J 2020. [DOI: 10.1016/j.microc.2019.104276] [Citation(s) in RCA: 5] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
|
31
|
Tormena CD, Marcheafave GG, Rakocevic M, Bruns RE, Scarminio IS. Sequential mixture design optimization for divergent metabolite analysis: Enriched carbon dioxide effects on Coffea arabica L. leaves and buds. Talanta 2019; 191:382-389. [DOI: 10.1016/j.talanta.2018.09.002] [Citation(s) in RCA: 14] [Impact Index Per Article: 2.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/25/2018] [Revised: 08/31/2018] [Accepted: 09/01/2018] [Indexed: 11/28/2022]
|
32
|
Simultaneous Zinc and selenium biofortification in rice. Accumulation, localization and implications on the overall mineral content of the flour. J Cereal Sci 2018. [DOI: 10.1016/j.jcs.2018.05.005] [Citation(s) in RCA: 39] [Impact Index Per Article: 6.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]
|
33
|
Ramalho JC, Rodrigues AP, Lidon FC, Marques LMC, Leitão AE, Fortunato AS, Pais IP, Silva MJ, Scotti-Campos P, Lopes A, Reboredo FH, Ribeiro-Barros AI. Stress cross-response of the antioxidative system promoted by superimposed drought and cold conditions in Coffea spp. PLoS One 2018; 13:e0198694. [PMID: 29870563 PMCID: PMC5988331 DOI: 10.1371/journal.pone.0198694] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.8] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/22/2018] [Accepted: 05/23/2018] [Indexed: 12/18/2022] Open
Abstract
The understanding of acclimation strategies to low temperature and water availability is decisive to ensure coffee crop sustainability, since these environmental conditions determine the suitability of cultivation areas. In this context, the impacts of single and combined exposure to drought and cold were evaluated in three genotypes of the two major cropped species, Coffea arabica cv. Icatu, Coffea canephora cv. Apoatã, and the hybrid Obatã. Crucial traits of plant resilience to environmental stresses have been examined: photosynthesis, lipoperoxidation and the antioxidant response. Drought and/or cold promoted leaf dehydration, which was accompanied by stomatal and mesophyll limitations that impaired leaf C-assimilation in all genotypes. However, Icatu showed a lower impact upon stress exposure and a faster and complete photosynthetic recovery. Although lipoperoxidation was increased by drought (Icatu) and cold (all genotypes), it was greatly reduced by stress interaction, especially in Icatu. In fact, although the antioxidative system was reinforced under single drought and cold exposure (e.g., activity of enzymes as Cu,Zn-superoxide dismutase, ascorbate peroxidase, APX, glutathione reductase and catalase, CAT), the stronger increases were observed upon the simultaneous exposure to both stresses, which was accompanied with a transcriptional response of some genes, namely related to APX. Complementary, non-enzyme antioxidant molecules were promoted mostly by cold and the stress interaction, including α-tocopherol (in C. arabica plants), ascorbate (ASC), zeaxanthin, and phenolic compounds (all genotypes). In general, drought promoted antioxidant enzymes activity, whereas cold enhanced the synthesis of both enzyme and non-enzyme antioxidants, the latter likely related to a higher need of antioxidative capability when enzyme reactions were probably quite repressed by low temperature. Icatu showed the wider antioxidative capability, with the triggering of all studied antioxidative molecules by drought (except CAT), cold, and, particularly, stress interaction (except ASC), revealing a clear stress cross-tolerance. This justified the lower impacts on membrane lipoperoxidation and photosynthetic capacity under stress interaction conditions, related to a better ROS control. These findings are also relevant to coffee water management, showing that watering in the cold season should be largely avoided.
Collapse
Affiliation(s)
- José C. Ramalho
- Plant-Environment Interactions & Biodiversity Lab (PlantStress&Biodiversity), Linking Landscape, Environment, Agriculture and Food Unit (LEAF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Oeiras, Portugal
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Caparica, Portugal
| | - Ana P. Rodrigues
- Plant-Environment Interactions & Biodiversity Lab (PlantStress&Biodiversity), Linking Landscape, Environment, Agriculture and Food Unit (LEAF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Oeiras, Portugal
| | - Fernando C. Lidon
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Caparica, Portugal
| | - Luís M. C. Marques
- Colóides Polimeros e Superficies, Instituto de Tecnologia Química e Biológica (ITQB), Universidade NOVA de Lisboa (UNL), Oeiras, Portugal
| | - A. Eduardo Leitão
- Plant-Environment Interactions & Biodiversity Lab (PlantStress&Biodiversity), Linking Landscape, Environment, Agriculture and Food Unit (LEAF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Oeiras, Portugal
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Caparica, Portugal
| | - Ana S. Fortunato
- Plant-Environment Interactions & Biodiversity Lab (PlantStress&Biodiversity), Linking Landscape, Environment, Agriculture and Food Unit (LEAF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Oeiras, Portugal
| | - Isabel P. Pais
- Unid. Investigação em Biotecnologia e Recursos Genéticos, Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Oeiras, Portugal
| | - Maria J. Silva
- Plant-Environment Interactions & Biodiversity Lab (PlantStress&Biodiversity), Linking Landscape, Environment, Agriculture and Food Unit (LEAF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Oeiras, Portugal
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Caparica, Portugal
| | - Paula Scotti-Campos
- Unid. Investigação em Biotecnologia e Recursos Genéticos, Instituto Nacional de Investigação Agrária e Veterinária, I.P. (INIAV), Oeiras, Portugal
| | - António Lopes
- Colóides Polimeros e Superficies, Instituto de Tecnologia Química e Biológica (ITQB), Universidade NOVA de Lisboa (UNL), Oeiras, Portugal
| | - F. H. Reboredo
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Caparica, Portugal
| | - Ana I. Ribeiro-Barros
- Plant-Environment Interactions & Biodiversity Lab (PlantStress&Biodiversity), Linking Landscape, Environment, Agriculture and Food Unit (LEAF), Dept. Recursos Naturais, Ambiente e Território (DRAT), Instituto Superior de Agronomia (ISA), Universidade de Lisboa (ULisboa), Oeiras, Portugal
- Unidade de Geobiociências, Geoengenharias e Geotecnologias (GeoBioTec), Faculdade de Ciências Tecnologia (FCT), Universidade NOVA de Lisboa (UNL), Caparica, Portugal
| |
Collapse
|