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Liu G, Zhang Z, Tian Y, Yang J, Xu X, Liu X. VvbZIP22 regulates quercetin synthesis to enhances cold resistance in grape. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2025; 350:112293. [PMID: 39414149 DOI: 10.1016/j.plantsci.2024.112293] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/09/2024] [Revised: 10/10/2024] [Accepted: 10/12/2024] [Indexed: 10/18/2024]
Abstract
Grapes are one of the important fruit crops widely cultivated in the world, with high nutritional and economic value. However, with the intensification of global warming, extreme low temperature has seriously affected the development of the grape industry. Quercetin is a highly antioxidant active substance that can enhance the tolerance of plants to external environmental stress, but its function and mechanism in response to low-temperature stress in grapes are still unclear. Here, we found that grapes accumulate more quercetin under low-temperature stress, and exogenous quercetin can significantly improve the cold resistance of grapes. The key quercetin synthesis gene VvFLS1 (flavanol synthase 1) is up-regulated after low-temperature treatment, and overexpression of VvFLS1 increases quercetin content and enhances the cold resistance of grape. Yeast one-hybrid and dual luciferase reporter systems demonstrate that VvbZIP22 (basic-leucine zipper 22) directly binds to the VvFLS1 promoter, and VvbZIP22 has cold-induced expression characteristics. Overexpression of VvbZIP22 significantly improves the cold resistance of grape. The above results indicate that quercetin plays an important role in the response of grapes to low-temperature stress. Under low temperature, VvbZIP22 can mediate quercetin synthesis through regulating VvFLS1, alleviate oxidative damage, and improve the cold resistance of grapes.
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Affiliation(s)
- Guangchao Liu
- College of Life Science, Qingdao Agricultural University, Qingdao, China
| | - Zhe Zhang
- College of Life Science, Qingdao Agricultural University, Qingdao, China
| | - Ye Tian
- College of Life Science, Qingdao Agricultural University, Qingdao, China
| | - Jie Yang
- College of Food Science and Engineering, Qingdao Agricultural University, Qingdao, China
| | - Xingfeng Xu
- College of Food Science and Engineering, Qingdao Agricultural University, Qingdao, China
| | - Xin Liu
- College of Life Science, Qingdao Agricultural University, Qingdao, China.
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Sanclemente MA. A role for aquaporins in the modulation of cold stress tolerance in oriental melon. PLANT PHYSIOLOGY 2024; 197:kiae578. [PMID: 39484985 DOI: 10.1093/plphys/kiae578] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/04/2024] [Revised: 10/23/2024] [Accepted: 10/23/2024] [Indexed: 11/03/2024]
Affiliation(s)
- Maria-Angelica Sanclemente
- Horticultural Sciences, University of Florida, Gainesville, FL 32601, USA
- Assistant Feature Editor, Plant Physiology, American Society of Plant Biologists
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Rasheed H, Shi L, Winarsih C, Jakada BH, Chai R, Huang H. Plant Growth Regulators: An Overview of WOX Gene Family. PLANTS (BASEL, SWITZERLAND) 2024; 13:3108. [PMID: 39520025 PMCID: PMC11548557 DOI: 10.3390/plants13213108] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/09/2024] [Revised: 10/31/2024] [Accepted: 11/02/2024] [Indexed: 11/16/2024]
Abstract
The adaptation of plants to land requires sophisticated biological processes and signaling. Transcription factors (TFs) regulate several cellular and metabolic activities, as well as signaling pathways in plants during stress and growth and development. The WUSCHEL-RELATED HOMEOBOX (WOX) genes are TFs that are part of the homeodomain (HD) family, which is important for the maintenance of apical meristem, stem cell niche, and other cellular processes. The WOX gene family is divided into three clades: ancient, intermediate, and modern (WUS) based on historical evolution linkage. The number of WOX genes in the plant body increases as plants grow more complex and varies in different species. Numerous research studies have discovered that the WOX gene family play a role in the whole plant's growth and development, such as in the stem, embryo, root, flower, and leaf. This review comprehensively analyzes roles of the WOX gene family across various plant species, highlighting the evolutionary significance and potential biotechnological applications in stress resistance and crop improvement.
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Affiliation(s)
- Haroon Rasheed
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China; (H.R.); (L.S.); (C.W.)
| | - Lin Shi
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China; (H.R.); (L.S.); (C.W.)
| | - Chichi Winarsih
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China; (H.R.); (L.S.); (C.W.)
| | - Bello Hassan Jakada
- Key Laboratory of Saline-Alkali Vegetation Ecology Restoration, Ministry of Education, College of Life Sciences, Northeast Forestry University, Harbin 150040, China;
| | - Rusong Chai
- Forest Botanical Garden of Heilongjiang Province, Haping Road 105, Harbin 150040, China
| | - Haijiao Huang
- State Key Laboratory of Tree Genetics and Breeding, Northeast Forestry University, Harbin 150040, China; (H.R.); (L.S.); (C.W.)
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Rurek M, Smolibowski M. Variability of plant transcriptomic responses under stress acclimation: a review from high throughput studies. Acta Biochim Pol 2024; 71:13585. [PMID: 39524930 PMCID: PMC11543463 DOI: 10.3389/abp.2024.13585] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 07/26/2024] [Accepted: 10/15/2024] [Indexed: 11/16/2024]
Abstract
Plant transcriptomes are complex entities shaped spatially and temporally by a multitude of stressors. The aim of this review was to summarize the most relevant transcriptomic responses to selected abiotic (UV radiation, chemical compounds, drought, suboptimal temperature) and biotic (bacteria, fungi, viruses, viroids) stress conditions in a variety of plant species, including model species, crops, and medicinal plants. Selected basic and applicative studies employing RNA-seq from various sequencing platforms and single-cell RNA-seq were involved. The transcriptomic responsiveness of various plant species and the diversity of affected gene families were discussed. Under stress acclimation, plant transcriptomes respond particularly dynamically. Stress response involved both distinct, but also similar gene families, depending on the species, tissue, and the quality and dosage of the stressor. We also noted the over-representation of transcriptomic data for some plant organs. Studies on plant transcriptomes allow for a better understanding of response strategies to environmental conditions. Functional analyses reveal the multitude of stress-affected genes as well as acclimatory mechanisms and suggest metabolome diversity, particularly among medicinal species. Extensive characterization of transcriptomic responses to stress would result in the development of new cultivars that would cope with stress more efficiently. These actions would include modern methodological tools, including advanced genetic engineering, as well as gene editing, especially for the expression of selected stress proteins in planta and for metabolic modifications that allow more efficient synthesis of secondary metabolites.
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Affiliation(s)
- Michał Rurek
- Department of Molecular and Cellular Biology, Institute of Molecular Biology and Biotechnology, Faculty of Biology, Adam Mickiewicz University, Poznań, Poland
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Oubohssaine M, Hnini M, Rabeh K. Exploring lipid signaling in plant physiology: From cellular membranes to environmental adaptation. JOURNAL OF PLANT PHYSIOLOGY 2024; 300:154295. [PMID: 38885581 DOI: 10.1016/j.jplph.2024.154295] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/15/2024] [Revised: 05/23/2024] [Accepted: 06/07/2024] [Indexed: 06/20/2024]
Abstract
Lipids have evolved as versatile signaling molecules that regulate a variety of physiological processes in plants. Convincing evidence highlights their critical role as mediators in a wide range of plant processes required for survival, growth, development, and responses to environmental conditions such as water availability, temperature changes, salt, pests, and diseases. Understanding lipid signaling as a critical process has helped us expand our understanding of plant biology by explaining how plants sense and respond to environmental cues. Lipid signaling pathways constitute a complex network of lipids, enzymes, and receptors that coordinate important cellular responses and stressing plant biology's changing and adaptable traits. Plant lipid signaling involves a wide range of lipid classes, including phospholipids, sphingolipids, oxylipins, and sterols, each of which contributes differently to cellular communication and control. These lipids function not only as structural components, but also as bioactive molecules that transfer signals. The mechanisms entail the production of lipid mediators and their detection by particular receptors, which frequently trigger downstream cascades that affect gene expression, cellular functions, and overall plant growth. This review looks into lipid signaling in plant physiology, giving an in-depth look and emphasizing its critical function as a master regulator of vital activities.
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Affiliation(s)
- Malika Oubohssaine
- Microbiology and Molecular Biology Team, Center of Plant and Microbial Biotechnology, Biodiversity and Environment, Faculty of Sciences, Mohammed V University in Rabat, Avenue Ibn Battouta, BP 1014, Rabat, 10000, Morocco.
| | - Mohamed Hnini
- Microbiology and Molecular Biology Team, Center of Plant and Microbial Biotechnology, Biodiversity and Environment, Faculty of Sciences, Mohammed V University in Rabat, Avenue Ibn Battouta, BP 1014, Rabat, 10000, Morocco
| | - Karim Rabeh
- Microbiology and Molecular Biology Team, Center of Plant and Microbial Biotechnology, Biodiversity and Environment, Faculty of Sciences, Mohammed V University in Rabat, Avenue Ibn Battouta, BP 1014, Rabat, 10000, Morocco
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Islam SNU, Kouser S, Hassan P, Asgher M, Shah AA, Khan NA. Gamma-aminobutyric acid interactions with phytohormones and its role in modulating abiotic and biotic stress in plants. STRESS BIOLOGY 2024; 4:36. [PMID: 39158750 PMCID: PMC11333426 DOI: 10.1007/s44154-024-00180-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 01/15/2024] [Accepted: 06/10/2024] [Indexed: 08/20/2024]
Abstract
Gamma-aminobutyric acid (GABA), a ubiquitous non-protein 4-carbon amino acid present in both prokaryotic and eukaryotic organisms. It is conventionally recognized as a neurotransmitter in mammals and plays a crucial role in plants. The context of this review centers on the impact of GABA in mitigating abiotic stresses induced by climate change, such as drought, salinity, heat, and heavy metal exposure. Beyond its neurotransmitter role, GABA emerges as a key player in diverse metabolic processes, safeguarding plants against multifaceted abiotic as well as biotic challenges. This comprehensive exploration delves into the GABA biosynthetic pathway, its transport mechanisms, and its intricate interplay with various abiotic stresses. The discussion extends to the nuanced relationship between GABA and phytohormones during abiotic stress acclimation, offering insights into the strategic development of mitigation strategies against these stresses. The delineation of GABA's crosstalk with phytohormones underscores its pivotal role in formulating crucial strategies for abiotic stress alleviation in plants.
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Affiliation(s)
- Syed Nazar Ul Islam
- Plant Physiology and Biochemistry Laboratory, Department of Botany, School of Biosciences and Biotechnology, Baba Ghulam Shah Badshah University, Rajouri, Jammu and Kashmir, 185234, India
| | - Shaista Kouser
- Plant Physiology and Biochemistry Laboratory, Department of Botany, School of Biosciences and Biotechnology, Baba Ghulam Shah Badshah University, Rajouri, Jammu and Kashmir, 185234, India
| | - Parveena Hassan
- School of Biosciences and Biotechnology, Baba Ghulam Shah Badshah University, Rajouri, Jammu and Kashmir, 185234, India
| | - Mohd Asgher
- Plant Physiology and Biochemistry Laboratory, Department of Botany, School of Biosciences and Biotechnology, Baba Ghulam Shah Badshah University, Rajouri, Jammu and Kashmir, 185234, India.
| | - Ali Asghar Shah
- School of Biosciences and Biotechnology, Baba Ghulam Shah Badshah University, Rajouri, Jammu and Kashmir, 185234, India
| | - Nafees A Khan
- Plant Physiology and Biochemistry Laboratory, Department of Botany, Aligarh Muslim University, Aligarh, 202002, India.
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Ullah I, Ullah S, Amin F, Al-Hawadi JS, Okla MK, Alaraidh IA, AbdElgawad H, Liu K, Harrison MT, Saud S, Hassan S, Nawaz T, Zhu M, Liu H, Fahad S. Germination responses of Lens Culiunaris L. seeds to osmotic potentials at cardinal temperatures using hydrothermal time model. BMC PLANT BIOLOGY 2024; 24:502. [PMID: 38840053 PMCID: PMC11151646 DOI: 10.1186/s12870-024-05223-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/18/2024] [Accepted: 05/30/2024] [Indexed: 06/07/2024]
Abstract
BACKGROUND Lentil is a significant legume that are consumed as a staple food and have a significant economic impact around the world. The purpose of the present research on lentil was to assess the hydrothermal time model's capacity to explain the dynamics of Lens culinaris L. var. Markaz-09 seed germination, as well as to ascertain the germination responses at various sub-optimal temperatures (T) and water potentials (Ψ). In order to study lentil seed germination (SG) behavior at variable water potentials (Ψs) and temperatures (Ts). A lab experiment employing the hydrothermal time model was created. Seeds were germinated at six distinct temperatures: 15 0С, 20 0С, 25 0С, 30 0С, 35 0С, and 40 0С, with five Ψs of 0, -0.3, -0.6, -0.9, and - 1.2 MPa in a PEG-6000 (Polyethylene glycol 6000) solution. RESULTS The results indicated that the agronomic parameters like Germination index (GI), Germination energy (GE), Timson germination index (TGI), were maximum in 25 0C at (-0.9 MPa) and lowest at 40 0C in 0 MPa. On other hand, mean germination time (MGT) value was highest at 15 0C in -1.2 MPa and minimum at 40 0C in (-0.6 MPa) while Mean germination rate (MGR) was maximum at 40 0C in (0 MPa) and minimum at 15 0C in (-0.6 MPa). CONCLUSIONS The HTT model eventually defined the germination response of Lens culinaris L. var. Markaz-09 (Lentil) for all Ts and Ψs, allowing it to be employed as a predictive tool in Lens culinaris L. var. Markaz-09 (Lentil) seed germination simulation models.
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Affiliation(s)
- Ibrar Ullah
- Department of Botany, University of Peshawar, Peshawar, 25120, Pakistan
| | - Sami Ullah
- Department of Botany, University of Peshawar, Peshawar, 25120, Pakistan.
| | - Fazal Amin
- Department of Botany, University of Peshawar, Peshawar, 25120, Pakistan
| | | | - Mohammad K Okla
- Botany and Microbiology Department, College of Science, King Saud University, P.O. Box 2455, Riyadh, 11451, Saudi Arabia
| | - Ibrahim A Alaraidh
- Botany and Microbiology Department, College of Science, King Saud University, P.O. Box 2455, Riyadh, 11451, Saudi Arabia
| | - Hamada AbdElgawad
- Integrated Molecular Plant Physiology Research, Department of Biology, University of Antwerp, Antwerp, 2020, Belgium
| | - Ke Liu
- Tasmanian Institute of Agriculture, University of Tasmania, Burnie, TAS, 7250, Australia
| | - Matthew Tom Harrison
- Tasmanian Institute of Agriculture, University of Tasmania, Burnie, TAS, 7250, Australia
| | - Shah Saud
- College of Life Science, Linyi University, Linyi, 276000, Shandong, China.
| | - Shah Hassan
- Department of Agricultural Extension Education & Communication, The University of Agriculture, Peshawar, 25130, Khyber Pakhtunkhwa, Pakistan
| | - Taufiq Nawaz
- Department of Biology and Microbiology, South Dakota State University, Brookings, SD, 57007, USA.
| | - Mo Zhu
- College of Life Sciences, Henan Normal University, Xinxiang, 453007, P.R. China
- Henan International Joint Laboratory of Agricultural Microbial Ecology and Technology, Henan Normal University, Xinxiang, 453007, P.R. China
- Xinxiang Key Laboratory of Plant Stress Biology, Xinxiang, 453000, P.R. China
| | - Haitao Liu
- College of Resources and Environment, Henan Agricultural University, Zhengzhou, 450002, PR China
| | - Shah Fahad
- Department of Agronomy, Abdul Wali Khan University Mardan, 23200, Khyber Pakhtunkhwa, Pakistan.
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Zhong C, He Z, Liu Y, Li Z, Wang X, Jiang C, Kang S, Liu X, Zhao S, Wang J, Zhang H, Zhao X, Yu H. Genome-wide identification of TPS and TPP genes in cultivated peanut ( Arachis hypogaea) and functional characterization of AhTPS9 in response to cold stress. FRONTIERS IN PLANT SCIENCE 2024; 14:1343402. [PMID: 38312353 PMCID: PMC10834750 DOI: 10.3389/fpls.2023.1343402] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/23/2023] [Accepted: 12/29/2023] [Indexed: 02/06/2024]
Abstract
Introduction Trehalose is vital for plant metabolism, growth, and stress resilience, relying on Trehalose-6-phosphate synthase (TPS) and Trehalose-6-phosphate phosphatase (TPP) genes. Research on these genes in cultivated peanuts (Arachis hypogaea) is limited. Methods This study employed bioinformatics to identify and analyze AhTPS and AhTPP genes in cultivated peanuts, with subsequent experimental validation of AhTPS9's role in cold tolerance. Results In the cultivated peanut genome, a total of 16 AhTPS and 17 AhTPP genes were identified. AhTPS and AhTPP genes were observed in phylogenetic analysis, closely related to wild diploid peanuts, respectively. The evolutionary patterns of AhTPS and AhTPP genes were predominantly characterized by gene segmental duplication events and robust purifying selection. A variety of hormone-responsive and stress-related cis-elements were unveiled in our analysis of cis-regulatory elements. Distinct expression patterns of AhTPS and AhTPP genes across different peanut tissues, developmental stages, and treatments were revealed, suggesting potential roles in growth, development, and stress responses. Under low-temperature stress, qPCR results showcased upregulation in AhTPS genes (AhTPS2-5, AhTPS9-12, AhTPS14, AhTPS15) and AhTPP genes (AhTPP1, AhTPP6, AhTPP11, AhTPP13). Furthermore, AhTPS9, exhibiting the most significant expression difference under cold stress, was obviously induced by cold stress in cultivated peanut, and AhTPS9-overexpression improved the cold tolerance of Arabidopsis by protect the photosynthetic system of plants, and regulates sugar-related metabolites and genes. Discussion This comprehensive study lays the groundwork for understanding the roles of AhTPS and AhTPP gene families in trehalose regulation within cultivated peanuts and provides valuable insights into the mechanisms related to cold stress tolerance.
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Affiliation(s)
- Chao Zhong
- College of Agronomy, Shenyang Agricultural University, Shenyang, China
| | - Zehua He
- College of Agronomy, Shenyang Agricultural University, Shenyang, China
| | - Yu Liu
- College of Agronomy, Shenyang Agricultural University, Shenyang, China
| | - Zhao Li
- College of Agronomy, Shenyang Agricultural University, Shenyang, China
| | - Xiaoguang Wang
- College of Agronomy, Shenyang Agricultural University, Shenyang, China
| | - Chunji Jiang
- College of Agronomy, Shenyang Agricultural University, Shenyang, China
| | - Shuli Kang
- College of Agronomy, Shenyang Agricultural University, Shenyang, China
| | - Xibo Liu
- College of Agronomy, Shenyang Agricultural University, Shenyang, China
| | - Shuli Zhao
- College of Agronomy, Shenyang Agricultural University, Shenyang, China
| | - Jing Wang
- College of Agronomy, Shenyang Agricultural University, Shenyang, China
| | - He Zhang
- College of Agronomy, Shenyang Agricultural University, Shenyang, China
| | - Xinhua Zhao
- College of Agronomy, Shenyang Agricultural University, Shenyang, China
| | - Haiqiu Yu
- College of Agronomy, Shenyang Agricultural University, Shenyang, China
- Liaoning Agricultural Vocational and Technical College, Yingkou, China
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Lu L, Yang W, Dong Z, Tang L, Liu Y, Xie S, Yang Y. Integrated Transcriptomic and Metabolomics Analyses Reveal Molecular Responses to Cold Stress in Coconut ( Cocos nucifera L.) Seedlings. Int J Mol Sci 2023; 24:14563. [PMID: 37834015 PMCID: PMC10572742 DOI: 10.3390/ijms241914563] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2023] [Revised: 09/20/2023] [Accepted: 09/22/2023] [Indexed: 10/15/2023] Open
Abstract
Coconut is an important tropical and subtropical fruit and oil crop severely affected by cold temperature, limiting its distribution and application. Thus, studying its low-temperature reaction mechanism is required to expand its cultivation range. We used growth morphology and physiological analyses to characterize the response of coconuts to 10, 20, and 30 d of low temperatures, combined with transcriptome and metabolome analysis. Low-temperature treatment significantly reduced the plant height and dry weight of coconut seedlings. The contents of soil and plant analyzer development (SPAD), soluble sugar (SS), soluble protein (SP), proline (Pro), and malondialdehyde (MDA) in leaves were significantly increased, along with the activities of superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT), and the endogenous hormones abscisic acid (ABA), auxin (IAA), zeatin (ZR), and gibberellin (GA) contents. A large number of differentially expressed genes (DEGs) (9968) were detected under low-temperature conditions. Most DEGs were involved in mitogen-activated protein kinase (MAPK) signaling pathway-plant, plant hormone signal transduction, plant-pathogen interaction, biosynthesis of amino acids, amino sugar and nucleotide sugar metabolism, carbon metabolism, starch and sucrose metabolism, purine metabolism, and phenylpropanoid biosynthesis pathways. Transcription factors (TFs), including WRKY, AP2/ERF, HSF, bZIP, MYB, and bHLH families, were induced to significantly differentially express under cold stress. In addition, most genes associated with major cold-tolerance pathways, such as the ICE-CBF-COR, MAPK signaling, and endogenous hormones and their signaling pathways, were significantly up-regulated. Under low temperatures, a total of 205 differentially accumulated metabolites (DAMs) were enriched; 206 DAMs were in positive-ion mode and 97 in negative-ion mode, mainly including phenylpropanoids and polyketides, lipids and lipid-like molecules, benzenoids, organoheterocyclic compounds, organic oxygen compounds, organic acids and derivatives, nucleosides, nucleotides, and analogues. Comprehensive metabolome and transcriptome analysis revealed that the related genes and metabolites were mainly enriched in amino acid, flavonoid, carbohydrate, lipid, and nucleotide metabolism pathways under cold stress. Together, the results of this study provide important insights into the response of coconuts to cold stress, which will reveal the underlying molecular mechanisms and help in coconut screening and breeding.
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Affiliation(s)
- Lilan Lu
- Hainan Key Laboratory of Tropical Oil Crops Biology/Coconut Research Institute, Chinese Academy of Tropical Agricultural Sciences, Wenchang 571339, China; (L.L.); (W.Y.); (Z.D.); (L.T.)
| | - Weibo Yang
- Hainan Key Laboratory of Tropical Oil Crops Biology/Coconut Research Institute, Chinese Academy of Tropical Agricultural Sciences, Wenchang 571339, China; (L.L.); (W.Y.); (Z.D.); (L.T.)
| | - Zhiguo Dong
- Hainan Key Laboratory of Tropical Oil Crops Biology/Coconut Research Institute, Chinese Academy of Tropical Agricultural Sciences, Wenchang 571339, China; (L.L.); (W.Y.); (Z.D.); (L.T.)
| | - Longxiang Tang
- Hainan Key Laboratory of Tropical Oil Crops Biology/Coconut Research Institute, Chinese Academy of Tropical Agricultural Sciences, Wenchang 571339, China; (L.L.); (W.Y.); (Z.D.); (L.T.)
| | - Yingying Liu
- School of Earth Sciences, China University of Geosciences, Wuhan 430074, China;
| | - Shuyun Xie
- School of Earth Sciences, China University of Geosciences, Wuhan 430074, China;
| | - Yaodong Yang
- Hainan Key Laboratory of Tropical Oil Crops Biology/Coconut Research Institute, Chinese Academy of Tropical Agricultural Sciences, Wenchang 571339, China; (L.L.); (W.Y.); (Z.D.); (L.T.)
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Toor MD, Kizilkaya R, Ullah I, Koleva L, Basit A, Mohamed HI. Potential Role of Vermicompost in Abiotic Stress Tolerance of Crop Plants: a Review. JOURNAL OF SOIL SCIENCE AND PLANT NUTRITION 2023. [DOI: 10.1007/s42729-023-01476-0] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Accepted: 09/06/2023] [Indexed: 10/26/2023]
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Li Z, Huang C, Han L. Differential Regulations of Antioxidant Metabolism and Cold-Responsive Genes in Three Bermudagrass Genotypes under Chilling and Freezing Stress. Int J Mol Sci 2023; 24:14070. [PMID: 37762373 PMCID: PMC10530996 DOI: 10.3390/ijms241814070] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/18/2023] [Revised: 08/07/2023] [Accepted: 08/10/2023] [Indexed: 09/29/2023] Open
Abstract
As a typical warm-season grass, bermudagrass growth and turf quality begin to decrease when the environmental temperature drops below 20 °C. The current study investigated the differential responses of three bermudagrass genotypes to chilling stress (8/4 °C) for 15 days and then freezing stress (2/-2 °C) for 2 days. The three genotypes exhibited significant variation in chilling and freezing tolerance, and Chuannong-3, common bermudagrass 001, and Tifdwarf were ranked as cold-tolerant, -intermediate, and -sensitive genotypes based on evaluations of chlorophyll content, the photochemical efficiency of photosystem II, oxidative damage, and cell membrane stability, respectively. Chuannong-3 achieved better tolerance through enhancing the antioxidant defense system to stabilize cell membrane and reactive oxygen species homeostasis after being subjected to chilling and freezing stresses. Chuannong-3 also downregulated the ethylene signaling pathway by improving CdCTR1 expression and suppressing the transcript levels of CdEIN3-1 and CdEIN3-2; however, it upregulated the hydrogen sulfide signaling pathway via an increase in CdISCS expression under cold stress. In addition, the molecular basis of cold tolerance could be associated with the mediation of key genes in the heat shock pathway (CdHSFA-2b, CdHSBP-1, CdHSP22, and CdHSP40) and the CdOSMOTIN in Chuannong-3 because the accumulation of stress-defensive proteins, including heat shock proteins and osmotin, plays a positive role in osmoprotection, osmotic adjustment, or the repair of denatured proteins as molecular chaperones under cold stress. The current findings give an insight into the physiological and molecular mechanisms of cold tolerance in the new cultivar Chuannong-3, which provides valuable information for turfgrass breeders and practitioners.
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Affiliation(s)
- Zhou Li
- Institute of Turfgrass Science, Beijing Forestry University, Beijing 100083, China
- Department of Turf Science and Engineering, Sichuan Agricultural University, Chengdu 611130, China
| | - Cheng Huang
- Department of Turf Science and Engineering, Sichuan Agricultural University, Chengdu 611130, China
| | - Liebao Han
- Institute of Turfgrass Science, Beijing Forestry University, Beijing 100083, China
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Yang M, Teng Y, Yue T, Wang Z, Feng G, Ruan J, Yan S, Zheng Y, Zhang L, Chen Q, Meng F. The Overexpression of Peanut ( Arachis hypogaea L.) AhALDH2B6 in Soybean Enhances Cold Resistance. PLANTS (BASEL, SWITZERLAND) 2023; 12:2928. [PMID: 37631140 PMCID: PMC10459444 DOI: 10.3390/plants12162928] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 07/28/2023] [Revised: 08/05/2023] [Accepted: 08/08/2023] [Indexed: 08/27/2023]
Abstract
Soybeans are the main source of oils and protein for humans and animals; however, cold stress jeopardizes their growth and limits the soybean planting area. Aldehyde dehydrogenases (ALDH) are conserved enzymes that catalyze aldehyde oxidation for detoxification in response to stress. Additionally, transgenic breeding is an efficient method for producing stress-resistant germplasms. In this study, the peanut ALDH gene AhALDH2B6 was heterologously expressed in soybean, and its function was tested. We performed RNA-seq using transgenic and wild-type soybeans with and without cold treatment to investigate the potential mechanism. Transgenic soybeans developed stronger cold tolerance, with longer roots and taller stems than P3 soybeans. Biochemically, the transgenic soybeans exhibited a decrease in malondialdehyde activity and an increase in peroxidase and catalase content, both of which are indicative of stress alleviation. They also possessed higher levels of ALDH enzyme activity. Two phenylpropanoid-related pathways were specifically enriched in up-regulated differentially expressed genes (DEGs), including the phenylpropanoid metabolic process and phenylpropanoid biosynthetic process. Our findings suggest that AhALDH2B6 specifically up-regulates genes involved in oxidoreductase-related functions such as peroxidase, oxidoreductase, monooxygenase, and antioxidant activity, which is partially consistent with our biochemical data. These findings established the function of AhALDH2B6, especially its role in cold stress processes, and provided a foundation for molecular plant breeding, especially plant-stress-resistance breeding.
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Affiliation(s)
- Mingyu Yang
- College of Agriculture, Northeast Agricultural University, Harbin 150030, China; (M.Y.); (Y.T.); (T.Y.); (Z.W.); (G.F.); (J.R.); (S.Y.)
- Northeast Institute of Geography, Agroecology Chinese Academy of Sciences, Harbin 150081, China
| | - Yuhan Teng
- College of Agriculture, Northeast Agricultural University, Harbin 150030, China; (M.Y.); (Y.T.); (T.Y.); (Z.W.); (G.F.); (J.R.); (S.Y.)
- Northeast Institute of Geography, Agroecology Chinese Academy of Sciences, Harbin 150081, China
| | - Tong Yue
- College of Agriculture, Northeast Agricultural University, Harbin 150030, China; (M.Y.); (Y.T.); (T.Y.); (Z.W.); (G.F.); (J.R.); (S.Y.)
- Northeast Institute of Geography, Agroecology Chinese Academy of Sciences, Harbin 150081, China
| | - Ziye Wang
- College of Agriculture, Northeast Agricultural University, Harbin 150030, China; (M.Y.); (Y.T.); (T.Y.); (Z.W.); (G.F.); (J.R.); (S.Y.)
| | - Guanghui Feng
- College of Agriculture, Northeast Agricultural University, Harbin 150030, China; (M.Y.); (Y.T.); (T.Y.); (Z.W.); (G.F.); (J.R.); (S.Y.)
| | - Jingwen Ruan
- College of Agriculture, Northeast Agricultural University, Harbin 150030, China; (M.Y.); (Y.T.); (T.Y.); (Z.W.); (G.F.); (J.R.); (S.Y.)
| | - Shi Yan
- College of Agriculture, Northeast Agricultural University, Harbin 150030, China; (M.Y.); (Y.T.); (T.Y.); (Z.W.); (G.F.); (J.R.); (S.Y.)
| | - Yuhong Zheng
- Jilin Academy of Agricultural Sciences, Changchun 130033, China;
| | - Ling Zhang
- Jilin Academy of Agricultural Sciences, Changchun 130033, China;
| | - Qingshan Chen
- College of Agriculture, Northeast Agricultural University, Harbin 150030, China; (M.Y.); (Y.T.); (T.Y.); (Z.W.); (G.F.); (J.R.); (S.Y.)
| | - Fanli Meng
- College of Agriculture, Northeast Agricultural University, Harbin 150030, China; (M.Y.); (Y.T.); (T.Y.); (Z.W.); (G.F.); (J.R.); (S.Y.)
- Northeast Institute of Geography, Agroecology Chinese Academy of Sciences, Harbin 150081, China
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13
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Boutet G, Lavaud C, Lesné A, Miteul H, Pilet-Nayel ML, Andrivon D, Lejeune-Hénaut I, Baranger A. Five Regions of the Pea Genome Co-Control Partial Resistance to D. pinodes, Tolerance to Frost, and Some Architectural or Phenological Traits. Genes (Basel) 2023; 14:1399. [PMID: 37510304 PMCID: PMC10379203 DOI: 10.3390/genes14071399] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/01/2023] [Revised: 06/08/2023] [Accepted: 06/14/2023] [Indexed: 07/30/2023] Open
Abstract
Evidence for reciprocal links between plant responses to biotic or abiotic stresses and architectural and developmental traits has been raised using approaches based on epidemiology, physiology, or genetics. Winter pea has been selected for years for many agronomic traits contributing to yield, taking into account architectural or phenological traits such as height or flowering date. It remains nevertheless particularly susceptible to biotic and abiotic stresses, among which Didymella pinodes and frost are leading examples. The purpose of this study was to identify and resize QTL localizations that control partial resistance to D. pinodes, tolerance to frost, and architectural or phenological traits on pea dense genetic maps, considering how QTL colocalizations may impact future winter pea breeding. QTL analysis revealed five metaQTLs distributed over three linkage groups contributing to both D. pinodes disease severity and frost tolerance. At these loci, the haplotypes of alleles increasing both partial resistance to D. pinodes and frost tolerance also delayed the flowering date, increased the number of branches, and/or decreased the stipule length. These results question both the underlying mechanisms of the joint control of biotic stress resistance, abiotic stress tolerance, and plant architecture and phenology and the methods of marker-assisted selection optimizing stress control and productivity in winter pea breeding.
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Affiliation(s)
- Gilles Boutet
- IGEPP, INRAE, Institut Agro, Université de Rennes, 35653 Le Rheu, France
| | - Clément Lavaud
- IGEPP, INRAE, Institut Agro, Université de Rennes, 35653 Le Rheu, France
| | - Angélique Lesné
- IGEPP, INRAE, Institut Agro, Université de Rennes, 35653 Le Rheu, France
| | - Henri Miteul
- IGEPP, INRAE, Institut Agro, Université de Rennes, 35653 Le Rheu, France
| | | | - Didier Andrivon
- IGEPP, INRAE, Institut Agro, Université de Rennes, 35653 Le Rheu, France
| | - Isabelle Lejeune-Hénaut
- BioEcoAgro Joint Research Unit, INRAE, Université de Lille, Université de Liège, Université de Picardie Jules Verne, 80200 Estrées-Mons, France
| | - Alain Baranger
- IGEPP, INRAE, Institut Agro, Université de Rennes, 35653 Le Rheu, France
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14
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Ahmad I, Zhu G, Zhou G, Liu J, Younas MU, Zhu Y. Melatonin Role in Plant Growth and Physiology under Abiotic Stress. Int J Mol Sci 2023; 24:ijms24108759. [PMID: 37240106 DOI: 10.3390/ijms24108759] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/13/2023] [Revised: 05/05/2023] [Accepted: 05/11/2023] [Indexed: 05/28/2023] Open
Abstract
Phyto-melatonin improves crop yield by mitigating the negative effects of abiotic stresses on plant growth. Numerous studies are currently being conducted to investigate the significant performance of melatonin in crops in regulating agricultural growth and productivity. However, a comprehensive review of the pivotal performance of phyto-melatonin in regulating plant morpho-physiological and biochemical activities under abiotic stresses needs to be clarified. This review focused on the research on morpho-physiological activities, plant growth regulation, redox status, and signal transduction in plants under abiotic stresses. Furthermore, it also highlighted the role of phyto-melatonin in plant defense systems and as biostimulants under abiotic stress conditions. The study revealed that phyto-melatonin enhances some leaf senescence proteins, and that protein further interacts with the plant's photosynthesis activity, macromolecules, and changes in redox and response to abiotic stress. Our goal is to thoroughly evaluate phyto-melatonin performance under abiotic stress, which will help us better understand the mechanism by which phyto-melatonin regulates crop growth and yield.
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Affiliation(s)
- Irshad Ahmad
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of the Ministry of Education of China, Yangzhou University, Yangzhou 225009, China
| | - Guanglong Zhu
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of the Ministry of Education of China, Yangzhou University, Yangzhou 225009, China
| | - Guisheng Zhou
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of the Ministry of Education of China, Yangzhou University, Yangzhou 225009, China
- Key Lab of Crop Genetics & Physiology of Jiangsu Province, Yangzhou University, Yangzhou 225009, China
| | - Jiao Liu
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of the Ministry of Education of China, Yangzhou University, Yangzhou 225009, China
| | - Muhammad Usama Younas
- Department of Crop Genetics and Breeding, College of Agriculture, Yangzhou University, Yangzhou 225009, China
| | - Yiming Zhu
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of the Ministry of Education of China, Yangzhou University, Yangzhou 225009, China
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15
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Tao Q, Chen D, Bai M, Zhang Y, Zhang R, Chen X, Sun X, Niu T, Nie Y, Zhong S, Sun J. Hydrotime Model Parameters Estimate Seed Vigor and Predict Seedling Emergence Performance of Astragalus sinicus under Various Environmental Conditions. PLANTS (BASEL, SWITZERLAND) 2023; 12:plants12091876. [PMID: 37176935 PMCID: PMC10180758 DOI: 10.3390/plants12091876] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/21/2023] [Revised: 04/28/2023] [Accepted: 05/02/2023] [Indexed: 05/15/2023]
Abstract
Seed vigor is an important aspect of seed quality. High-vigor seeds show rapid and uniform germination and emerge well, especially under adverse environmental conditions. Here, we determined hydrotime model parameters by incubating seeds at different water potentials (0.0, -0.2, -0.4, -0.6, and -0.8 MPa) in the laboratory, for 12 seed lots of Chinese milk vetch (Astragalus sinicus) (CMV), a globally important legume used as forage, green manure, and a rotation crop. Pot experiments were conducted to investigate the seedling emergence performance of 12 CMV seed lots under control, water stress, salinity stress, deep sowing, and cold stress conditions. Meanwhile, the field emergence performance was evaluated on two sowing dates in June and October 2022. Correlation and regression analyses were implemented to explore the relationships between hydrotime model parameters and seedling emergence performance under various environmental conditions. The seed germination percentage did not differ significantly between seed lots when seeds were incubated at 0.0 MPa, whereas it did differ significantly between seed lots at water potentials of -0.2, -0.4, and -0.6 MPa. The emergence percentage, seedling dry weight, and simplified vigor index also differed significantly between the 12 seed lots under various environmental conditions. Ψb(50) showed a significant correlation with germination and emergence performance under various environmental conditions; however, little correlation was observed between θH or σφb and germination and emergence. These results indicate that Ψb(50) can be used to estimate seed vigor and predict seedling emergence performance under diverse environmental conditions for CMV and similar forage legumes. This study will enable seed researchers, plant breeders, and government program directors to target higher seed vigor more effectively for forage legumes.
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Affiliation(s)
- Qibo Tao
- Key Laboratory of National Forestry and Grassland Administration on Grassland Resources and Ecology in the Yellow River Delta, Qingdao Key Laboratory of Specialty Plant Germplasm Innovation and Utilization in Saline Soils of Coastal Beach, College of Grassland Science, Qingdao Agricultural University, Qingdao 266109, China
| | - Dali Chen
- State Key Laboratory of Herbage Improvement and Grassland Agro-Ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730020, China
| | - Mengjie Bai
- State Key Laboratory of Herbage Improvement and Grassland Agro-Ecosystems, Key Laboratory of Grassland Livestock Industry Innovation, Ministry of Agriculture and Rural Affairs, College of Pastoral Agriculture Science and Technology, Lanzhou University, Lanzhou 730020, China
| | - Yaqi Zhang
- Key Laboratory of National Forestry and Grassland Administration on Grassland Resources and Ecology in the Yellow River Delta, Qingdao Key Laboratory of Specialty Plant Germplasm Innovation and Utilization in Saline Soils of Coastal Beach, College of Grassland Science, Qingdao Agricultural University, Qingdao 266109, China
| | - Ruizhen Zhang
- College of Animal Science and Technology, Qingdao Agricultural University, Qingdao 266109, China
| | - Xiaofei Chen
- Key Laboratory of National Forestry and Grassland Administration on Grassland Resources and Ecology in the Yellow River Delta, Qingdao Key Laboratory of Specialty Plant Germplasm Innovation and Utilization in Saline Soils of Coastal Beach, College of Grassland Science, Qingdao Agricultural University, Qingdao 266109, China
| | - Xiaotong Sun
- College of Animal Science and Technology, Qingdao Agricultural University, Qingdao 266109, China
| | - Tianxiu Niu
- Key Laboratory of National Forestry and Grassland Administration on Grassland Resources and Ecology in the Yellow River Delta, Qingdao Key Laboratory of Specialty Plant Germplasm Innovation and Utilization in Saline Soils of Coastal Beach, College of Grassland Science, Qingdao Agricultural University, Qingdao 266109, China
| | - Yuting Nie
- Key Laboratory of National Forestry and Grassland Administration on Grassland Resources and Ecology in the Yellow River Delta, Qingdao Key Laboratory of Specialty Plant Germplasm Innovation and Utilization in Saline Soils of Coastal Beach, College of Grassland Science, Qingdao Agricultural University, Qingdao 266109, China
| | - Shangzhi Zhong
- Key Laboratory of National Forestry and Grassland Administration on Grassland Resources and Ecology in the Yellow River Delta, Qingdao Key Laboratory of Specialty Plant Germplasm Innovation and Utilization in Saline Soils of Coastal Beach, College of Grassland Science, Qingdao Agricultural University, Qingdao 266109, China
| | - Juan Sun
- Key Laboratory of National Forestry and Grassland Administration on Grassland Resources and Ecology in the Yellow River Delta, Qingdao Key Laboratory of Specialty Plant Germplasm Innovation and Utilization in Saline Soils of Coastal Beach, College of Grassland Science, Qingdao Agricultural University, Qingdao 266109, China
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16
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Tiwari M, Kumar R, Subramanian S, Doherty CJ, Jagadish SVK. Auxin-cytokinin interplay shapes root functionality under low-temperature stress. TRENDS IN PLANT SCIENCE 2023; 28:447-459. [PMID: 36599768 DOI: 10.1016/j.tplants.2022.12.004] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/08/2022] [Revised: 11/16/2022] [Accepted: 12/06/2022] [Indexed: 06/17/2023]
Abstract
Low-temperature stress alters root system architecture. In particular, changes in the levels and response to auxin and cytokinin determine the fate of root architecture and function under stress because of their vital roles in regulating root cell division, differentiation, and elongation. An intricate nexus of genes encoding components of auxin and cytokinin biosynthesis, signaling, and transport components operate to counteract stress and facilitate optimum development. We review the role of auxin transport and signaling and its regulation by cytokinin during root development and stem cell maintenance under low-temperature stress. We highlight intricate mechanisms operating in root stem cells to minimize DNA damage by altering phytohormone levels, and discuss a working model for cytokinin in low-temperatures stress response.
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Affiliation(s)
- Manish Tiwari
- Department of Agronomy, Kansas State University, Manhattan, KA 66506, USA.
| | - Ritesh Kumar
- Department of Agronomy, Kansas State University, Manhattan, KA 66506, USA
| | - Senthil Subramanian
- Department of Agronomy, Horticulture, and Plant Science, South Dakota State University, Brookings, SD 57006, USA
| | - Colleen J Doherty
- Department of Molecular and Structural Biochemistry, North Carolina State University, Raleigh, NC 27695, USA
| | - S V Krishna Jagadish
- Department of Agronomy, Kansas State University, Manhattan, KA 66506, USA; Department of Plant and Soil Science, Texas Tech University, Lubbock, TX 79410, USA.
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17
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Ahmad I, Song X, Hussein Ibrahim ME, Jamal Y, Younas MU, Zhu G, Zhou G, Adam Ali AY. The role of melatonin in plant growth and metabolism, and its interplay with nitric oxide and auxin in plants under different types of abiotic stress. FRONTIERS IN PLANT SCIENCE 2023; 14:1108507. [PMID: 36866369 PMCID: PMC9971941 DOI: 10.3389/fpls.2023.1108507] [Citation(s) in RCA: 9] [Impact Index Per Article: 4.5] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 11/26/2022] [Accepted: 01/09/2023] [Indexed: 06/01/2023]
Abstract
Melatonin is a pleiotropic signaling molecule that reduces the adverse effects of abiotic stresses, and enhances the growth and physiological function of many plant species. Several recent studies have demonstrated the pivotal role of melatonin in plant functions, specifically its regulation of crop growth and yield. However, a comprehensive understanding of melatonin, which regulates crop growth and yield under abiotic stress conditions, is not yet available. This review focuses on the progress of research on the biosynthesis, distribution, and metabolism of melatonin, and its multiple complex functions in plants and its role in the mechanisms of metabolism regulation in plants grown under abiotic stresses. In this review, we focused on the pivotal role of melatonin in the enhancement of plant growth and regulation of crop yield, and elucidated its interactions with nitric oxide (NO) and auxin (IAA, indole-3-acetic acid) when plants are grown under various abiotic stresses. The present review revealed that the endogenousapplication of melatonin to plants, and its interactions with NO and IAA, enhanced plant growth and yield under various abiotic stresses. The interaction of melatonin with NO regulated plant morphophysiological and biochemical activities, mediated by the G protein-coupled receptor and synthesis genes. The interaction of melatonin with IAA enhanced plant growth and physiological function by increasing the levels of IAA, synthesis, and polar transport. Our aim was to provide a comprehensive review of the performance of melatonin under various abiotic stresses, and, therefore, further explicate the mechanisms that plant hormones use to regulate plant growth and yield under abiotic stresses.
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Affiliation(s)
- Irshad Ahmad
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of the Ministry of Education of China, College of Agriculture, Yangzhou University, Yangzhou, China
| | - Xudong Song
- Department of Agronomy, Institute of Agricultural, Sudan University of Science and Technology, Khartoum, Sudan
| | - Muhi Eldeen Hussein Ibrahim
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of the Ministry of Education of China, College of Agriculture, Yangzhou University, Yangzhou, China
- Jiangsu Yanjiang Area, Institute of Agricultural Sciences, Nantong, China
| | - Yousaf Jamal
- Department of Agronomy, Faculty of Agriculture, University of Swabi, Swabi, Pakistan
| | - Muhammad Usama Younas
- Department of Crop Genetics and Breeding, College of Agriculture, Yangzhou University, Yangzhou, China
| | - Guanglong Zhu
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of the Ministry of Education of China, College of Agriculture, Yangzhou University, Yangzhou, China
| | - Guisheng Zhou
- Joint International Research Laboratory of Agriculture and Agri-Product Safety of the Ministry of Education of China, College of Agriculture, Yangzhou University, Yangzhou, China
- Key Lab of Crop Genetics & Physiology of Jiangsu Province, Yangzhou University, Yangzhou, China
| | - Adam Yousif Adam Ali
- Department of Agronomy, Faculty of Agricultural and Environmental Science, University of Gadarif, Al Gadarif, Sudan
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18
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Tsegaw M, Zegeye WA, Jiang B, Sun S, Yuan S, Han T, Wu T. Progress and Prospects of the Molecular Basis of Soybean Cold Tolerance. PLANTS (BASEL, SWITZERLAND) 2023; 12:459. [PMID: 36771543 PMCID: PMC9919458 DOI: 10.3390/plants12030459] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 11/04/2022] [Revised: 12/26/2022] [Accepted: 01/16/2023] [Indexed: 06/18/2023]
Abstract
Cold stress is a major factor influencing the geographical distribution of soybean growth and causes immense losses in productivity. Understanding the molecular mechanisms that the soybean has undergone to survive cold temperatures will have immense value in improving soybean cold tolerance. This review focuses on the molecular mechanisms involved in soybean response to cold. We summarized the recent studies on soybean cold-tolerant quantitative trait loci (QTLs), transcription factors, associated cold-regulated (COR) genes, and the regulatory pathways in response to cold stress. Cold-tolerant QTLs were found to be overlapped with the genomic region of maturity loci of E1, E3, E4, pubescence color locus of T, stem growth habit gene locus of Dt1, and leaf shape locus of Ln, indicating that pleiotropic loci may control multiple traits, including cold tolerance. The C-repeat responsive element binding factors (CBFs) are evolutionarily conserved across species. The expression of most GmDREB1s was upregulated by cold stress and overexpression of GmDREB1B;1 in soybean protoplast, and transgenic Arabidopsis plants can increase the expression of genes with the DRE core motif in their promoter regions under cold stress. Other soybean cold-responsive regulators, such as GmMYBJ1, GmNEK1, GmZF1, GmbZIP, GmTCF1a, SCOF-1 and so on, enhance cold tolerance by regulating the expression of COR genes in transgenic Arabidopsis. CBF-dependent and CBF-independent pathways are cross-talking and work together to activate cold stress gene expression. Even though it requires further dissection for precise understanding, the function of soybean cold-responsive transcription factors and associated COR genes studied in Arabidopsis shed light on the molecular mechanism of cold responses in soybeans and other crops. Furthermore, the findings may also provide practical applications for breeding cold-tolerant soybean varieties in high-latitude and high-altitude regions.
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Affiliation(s)
- Mesfin Tsegaw
- MARA Key Laboratory of Soybean Biology (Beijing), Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
- Department of Agricultural Biotechnology, Institute of Biotechnology, University of Gondar, Gondar P.O. Box 194, Ethiopia
| | - Workie Anley Zegeye
- Department of Agricultural Biotechnology, Institute of Biotechnology, University of Gondar, Gondar P.O. Box 194, Ethiopia
- John Innes Centre, Norwich Bioscience Institutes, Norwich NR2 3LA, UK
| | - Bingjun Jiang
- MARA Key Laboratory of Soybean Biology (Beijing), Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Shi Sun
- MARA Key Laboratory of Soybean Biology (Beijing), Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Shan Yuan
- MARA Key Laboratory of Soybean Biology (Beijing), Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Tianfu Han
- MARA Key Laboratory of Soybean Biology (Beijing), Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
| | - Tingting Wu
- MARA Key Laboratory of Soybean Biology (Beijing), Institute of Crop Sciences, Chinese Academy of Agricultural Sciences, Beijing 100081, China
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19
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Integrative Omics Analysis of Three Oil Palm Varieties Reveals (Tanzania × Ekona) TE as a Cold-Resistant Variety in Response to Low-Temperature Stress. Int J Mol Sci 2022; 23:ijms232314926. [PMID: 36499255 PMCID: PMC9740226 DOI: 10.3390/ijms232314926] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 10/28/2022] [Revised: 11/21/2022] [Accepted: 11/24/2022] [Indexed: 12/05/2022] Open
Abstract
Oil palm (Elaeis guineensis Jacq.) is an economically important tropical oil crop widely cultivated in tropical zones worldwide. Being a tropical crop, low-temperature stress adversely affects the oil palm. However, integrative leaf transcriptomic and proteomic analyses have not yet been conducted on an oil palm crop under cold stress. In this study, integrative omics transcriptomic and iTRAQ-based proteomic approaches were employed for three oil palm varieties, i.e., B × E (Bamenda × Ekona), O × G (E. oleifera × Elaeis guineensis), and T × E (Tanzania × Ekona), in response to low-temperature stress. In response to low-temperature stress at (8 °C) for 5 days, a total of 5175 up- and 2941 downregulated DEGs in BE-0_VS_BE-5, and a total of 3468 up- and 2443 downregulated DEGs for OG-0_VS_OG-5, and 3667 up- and 2151 downregulated DEGs for TE-0_VS_TE-5 were identified. iTRAQ-based proteomic analysis showed 349 up- and 657 downregulated DEPs for BE-0_VS_BE-5, 372 up- and 264 downregulated DEPs for OG-0_VS_OG-5, and 500 up- and 321 downregulated DEPs for TE-0_VS_TE-5 compared to control samples treated at 28 °C and 8 °C, respectively. The KEGG pathway correlation of oil palm has shown that the metabolic synthesis and biosynthesis of secondary metabolites pathways were significantly enriched in the transcriptome and proteome of the oil palm varieties. The correlation expression pattern revealed that TE-0_VS_TE-5 is highly expressed and BE-0_VS_BE-5 is suppressed in both the transcriptome and proteome in response to low temperature. Furthermore, numerous transcription factors (TFs) were found that may regulate cold acclimation in three oil palm varieties at low temperatures. Moreover, this study identified proteins involved in stresses (abiotic, biotic, oxidative, and heat shock), photosynthesis, and respiration in iTRAQ-based proteomic analysis of three oil palm varieties. The increased abundance of stress-responsive proteins and decreased abundance of photosynthesis-related proteins suggest that the TE variety may become cold-resistant in response to low-temperature stress. This study may provide a basis for understanding the molecular mechanism for the adaptation of oil palm varieties in response to low-temperature stress in China.
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20
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Bawa G, Liu Z, Zhou Y, Fan S, Ma Q, Tissue DT, Sun X. Cotton proteomics: Dissecting the stress response mechanisms in cotton. FRONTIERS IN PLANT SCIENCE 2022; 13:1035801. [PMID: 36466262 PMCID: PMC9714328 DOI: 10.3389/fpls.2022.1035801] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 09/03/2022] [Accepted: 10/31/2022] [Indexed: 06/17/2023]
Abstract
The natural environment of plants comprises a complex set of biotic and abiotic stresses, and plant responses to these stresses are complex as well. Plant proteomics approaches have significantly revealed dynamic changes in plant proteome responses to stress and developmental processes. Thus, we reviewed the recent advances in cotton proteomics research under changing environmental conditions, considering the progress and challenging factors. Finally, we highlight how single-cell proteomics is revolutionizing plant research at the proteomics level. We envision that future cotton proteomics research at the single-cell level will provide a more complete understanding of cotton's response to stresses.
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Affiliation(s)
- George Bawa
- State Key Laboratory of Cotton Biology, Key Laboratory of Plant Stress Biology, School of Life Sciences, Henan University, Kaifeng, China
| | - Zhixin Liu
- State Key Laboratory of Cotton Biology, Key Laboratory of Plant Stress Biology, School of Life Sciences, Henan University, Kaifeng, China
| | - Yaping Zhou
- State Key Laboratory of Cotton Biology, Key Laboratory of Plant Stress Biology, School of Life Sciences, Henan University, Kaifeng, China
| | - Shuli Fan
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences (ICR, CAAS), Anyang, China
| | - Qifeng Ma
- State Key Laboratory of Cotton Biology, Institute of Cotton Research, Chinese Academy of Agricultural Sciences (ICR, CAAS), Anyang, China
| | - David T. Tissue
- Hawkesbury Institute for the Environment, Western Sydney University, Richmond, NSW, Australia
| | - Xuwu Sun
- State Key Laboratory of Cotton Biology, Key Laboratory of Plant Stress Biology, School of Life Sciences, Henan University, Kaifeng, China
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21
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Su H, Tan C, Liu Y, Chen X, Li X, Jones A, Zhu Y, Song Y. Physiology and Molecular Breeding in Sustaining Wheat Grain Setting and Quality under Spring Cold Stress. Int J Mol Sci 2022; 23:ijms232214099. [PMID: 36430598 PMCID: PMC9693015 DOI: 10.3390/ijms232214099] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Revised: 11/10/2022] [Accepted: 11/12/2022] [Indexed: 11/17/2022] Open
Abstract
Spring cold stress (SCS) compromises the reproductive growth of wheat, being a major constraint in achieving high grain yield and quality in winter wheat. To sustain wheat productivity in SCS conditions, breeding cultivars conferring cold tolerance is key. In this review, we examine how grain setting and quality traits are affected by SCS, which may occur at the pre-anthesis stage. We have investigated the physiological and molecular mechanisms involved in floret and spikelet SCS tolerance. It includes the protective enzymes scavenging reactive oxygen species (ROS), hormonal adjustment, and carbohydrate metabolism. Lastly, we explored quantitative trait loci (QTLs) that regulate SCS for identifying candidate genes for breeding. The existing cultivars for SCS tolerance were primarily bred on agronomic and morphophysiological traits and lacked in molecular investigations. Therefore, breeding novel wheat cultivars based on QTLs and associated genes underlying the fundamental resistance mechanism is urgently needed to sustain grain setting and quality under SCS.
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Affiliation(s)
- Hui Su
- School of Agronomy, Anhui Agricultural University, Hefei 230036, China
| | - Cheng Tan
- School of Agronomy, Anhui Agricultural University, Hefei 230036, China
| | - Yonghua Liu
- School of Horticulture, Hainan University, Haikou 570228, China
| | - Xiang Chen
- School of Agronomy, Anhui Agricultural University, Hefei 230036, China
| | - Xinrui Li
- School of Agronomy, Anhui Agricultural University, Hefei 230036, China
| | - Ashley Jones
- Research School of Biology, The Australian National University, Canberra, ACT 2601, Australia
| | - Yulei Zhu
- School of Agronomy, Anhui Agricultural University, Hefei 230036, China
- Correspondence: (Y.Z.); (Y.S.)
| | - Youhong Song
- School of Agronomy, Anhui Agricultural University, Hefei 230036, China
- Centre for Crop Science, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland, Brisbane, QLD 4072, Australia
- Correspondence: (Y.Z.); (Y.S.)
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