The roles of plant proteases and protease inhibitors in drought response: a review

Physico-chemical features and functional relevance of tomato rhomboid proteases

In plants, regulated intramembrane proteolysis (RIP) is crucial for proper growth, development, and stress management. Rhomboid proteases (RPs) residing in the membrane play a vital role in orchestrating RIP. Although RPs can be found in most sequenced genomes, tomato rhomboids (SlRPs) have not yet been studied. Using alternative and comprehensive strategies, we found ten SlRPs encoded in the tomato genome. These SlRPs possess signature motifs and transmembrane domains, showing structural similarity to other members of the RP family. Also, SlRPs are genetically related to other known RPs of the Solanaceae family. Seven of the SlRPs retain serine-histidine catalytic dyads, making them proteolytically active, while three iRhoms lack the dyad and other structural motifs. Although SlRPs could have functional redundancy, their distribution and expression pattern indicate tissue specificity and responsiveness to specific external stimuli. The presence of development and stress-response-related cis-elements in the promoters of SlRPs supports this view. Furthermore, our strategically designed substrate-reporter assay shows that SlRPs have proteolytic activity similar to that of known RPs. This study provides a detailed understanding of all SlRPs and their physico-chemical features, shedding light on their involvement in physiological processes.

Effect of humidity on postmortem changes in rats

IMPORTANCE

In veterinary forensic science, accurately determining the postmortem interval (PMI) is crucial for identifying the causes of animal deaths. Autolysis, a significant postmortem process, influences PMI estimation, but its relationship with humidity is not well understood.

OBJECTIVE

This study aimed to improve the accuracy of PMI estimates in veterinary forensic cases by looking into how different humidity levels affect autolysis in different organs of rats.

METHODS

The study involved 38 male rats, examining histopathological changes in their heart, liver, and pancreas. These organs were subjected to controlled humidity levels (20%, 55%, and 80%) at a constant 22°C. Tissue samples were collected at several intervals (0 h, 12 h, 24 h, 3 days, and 8 days) for comprehensive analysis.

RESULTS

Distinct autolytic characteristics in animal organs emerged under varying humidity conditions. The low-humidity environment rapidly activated autolysis more than the high-humidity environment. In addition, it was found that lower humidity caused nuclear pyknosis, cytoplasmic disintegration, and myofiber interruption. The liver, in particular, showed portal triad aggregation and hepatocyte individuation. The pancreas experienced cell fragmentation and an enlarged intracellular space. High humidity also caused the loss of striations in cardiac tissues, and the liver showed vacuolation. Under these conditions, the pancreas changed eosinophilic secretory granules.

CONCLUSIONS AND RELEVANCE

The study successfully established a clear connection between the autolytic process in PMIs and relative humidity. These findings are significant for developing a more accurate and predictable method for PMI estimation in the field of veterinary forensic science.

Exogenous abscisic acid treatment regulates protein secretion in sorghum cell suspension cultures

Drought stress adversely affects plant growth, often leading to total crop failure. Upon sensing soil water deficits, plants switch on biosynthesis of abscisic acid (ABA), a stress hormone for drought adaptation. Here, we used exogenous ABA application to dark-grown sorghum cell suspension cultures as an experimental system to understand how a drought-tolerant crop responds to ABA. We evaluated intracellular and secreted proteins using isobaric tags for relative and absolute quantification. While the abundance of only ~ 7% (46 proteins) intracellular proteins changed in response to ABA, ~32% (82 proteins) of secreted proteins identified in this study were ABA responsive. This shows that the extracellular matrix is disproportionately targeted and suggests it plays a vital role in sorghum adaptation to drought. Extracellular proteins responsive to ABA were predominantly defense/detoxification and cell wall-modifying enzymes. We confirmed that sorghum plants exposed to drought stress activate genes encoding the same proteins identified in the in vitro cell culture system with ABA. Our results suggest that ABA activates defense and cell wall remodeling systems during stress response. This could underpin the success of sorghum adaptation to drought stress.

Potential role of apple wood biochar in mitigating mercury toxicity in corn (Zea mays L.)

Mercury (Hg) is a very toxic decomposition-resistant metal that can cause plant toxicity through bioaccumulation and oxidative damage. Biochar, derived from organic waste and agricultural garbage, is an on-site modification technique that can improve soil health in heavy metals-polluted regions. The present experiment was designed to explore the role of apple biochar in the management of mercury toxicity in corn (Zea mays cv. 'PL535'). Different levels of biochar derived from apple wood (0%, 2.5%, 5.0%, and 7.5% w/w) along with different Hg concentrations (0, 20, 40, and 60 mg/L) were used in the experiment that was based on a completely randomized design. Based on the results, HgCl2 at all rates reduced root and shoot dry weight and length, tolerance index, chlorophyll a and b content, the Hill reaction, and dissolved proteins and increased shoot and root Hg content (up to 72.57 and 717.56 times, respectively), cell death (up to 58.36%), MDA level (up to 47.82%), H2O2 (up to 66.33%), dissolved sugars, and proline. The results regarding enzymatic and non-enzymatic antioxidants revealed increases in total phenol and flavonoids content (up to 71.27% and 86.71%, respectively), DPPH free radical scavenging percentage, and catalase (CAT) and ascorbate peroxidase (APX) activity (up to 185.93% and 176.87%, respectively), in corn leaves with the increase in the Hg rate applied to the culture medium. The application of biochar to the substrate of the Hg-treated corns reduced Hg bioavailability, thereby reducing Hg accumulation in the roots (up to 76.88%) and shoots (up to 71.79%). It also reduced the adverse effect of Hg on the plants by increasing their shoot and root dry weight, photosynthesizing pigments, Hill reaction, and APX activity and reducing cell death, H2O2 content, and MDA content. The results reflected the capability of apple wood biochar at all rates in reducing Hg bioavailability and increasing Hg fixation in Hg-polluted soils. However, it was most effective at the rate of 7.5%.