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Wu X, Chen X, Zhang D, Hu X, Ding W, Wang Y, Li G, Dong N, Hu H, Hu T, Ru Z. Integrative multi-omics analysis reveals the underlying toxicological mechanisms of enrofloxacin on the growth of wheat seedling roots. JOURNAL OF HAZARDOUS MATERIALS 2024; 477:135303. [PMID: 39067300 DOI: 10.1016/j.jhazmat.2024.135303] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 03/25/2024] [Revised: 07/19/2024] [Accepted: 07/21/2024] [Indexed: 07/30/2024]
Abstract
The continuous release of antibiotics into agroecosystems has raised concerns about the potential negative effects of antibiotic residues on crops. In this study, the toxicological effects of enrofloxacin (ENR) on wheat seedlings were analyzed using a combination of morpho-physiological, transcriptomic, proteomic, and metabolomic approaches. ENR inhibited the growth of wheat (Triticum aestivum L.) roots and induced oxidative stress. In particular, ENR downregulated the oxidative phosphorylation pathway, while it enhanced glycolysis and the tricarboxylic acid cycle, thereby regulating the balance of intracellular energy metabolism. In addition, sustained exposure to excessive reactive oxygen species (ROS) resulted in an increase in reduced glutathione (GSH), a slight decrease in ascorbic acid (AsA), and a significant decrease in the ratio of GSH to oxidized glutathione (GSSG), which imbalanced the AsA-GSH cycle. In addition, the resulting increase in abnormal proteins triggered ubiquitin-independent proteasomal degradation pathways. Further, an increase in abscisic acid (ABA) and a decrease in jasmonic acid (JA) and its derivatives alleviated the inhibitory effect of ENR on the growth of wheat roots. In conclusion, direct damage and signaling by ROS, hormonal regulation, a decrease in the GSH to GSSG ratio, and insufficient energy supply were identified as key factors for the significant inhibition of wheat root growth under ENR stress.
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Affiliation(s)
- Xiaojun Wu
- Center of Wheat Research, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Collaborative Innovation Center of Modern Biological Breeding, Henan Institute of Science and Technology, Xinxiang 450003, China
| | - Xiangdong Chen
- Center of Wheat Research, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Collaborative Innovation Center of Modern Biological Breeding, Henan Institute of Science and Technology, Xinxiang 450003, China
| | - Dazhong Zhang
- Center of Wheat Research, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Collaborative Innovation Center of Modern Biological Breeding, Henan Institute of Science and Technology, Xinxiang 450003, China
| | - Xigui Hu
- Center of Wheat Research, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Collaborative Innovation Center of Modern Biological Breeding, Henan Institute of Science and Technology, Xinxiang 450003, China
| | - Weihua Ding
- Center of Wheat Research, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Collaborative Innovation Center of Modern Biological Breeding, Henan Institute of Science and Technology, Xinxiang 450003, China
| | - Yuquan Wang
- Center of Wheat Research, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Collaborative Innovation Center of Modern Biological Breeding, Henan Institute of Science and Technology, Xinxiang 450003, China
| | - Gan Li
- Center of Wheat Research, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Collaborative Innovation Center of Modern Biological Breeding, Henan Institute of Science and Technology, Xinxiang 450003, China
| | - Na Dong
- Center of Wheat Research, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Collaborative Innovation Center of Modern Biological Breeding, Henan Institute of Science and Technology, Xinxiang 450003, China
| | - Haiyan Hu
- Henan Collaborative Innovation Center of Modern Biological Breeding, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Engineering Research Center of Crop Genome Editing, Henan Institute of Science and Technology, Xinxiang 450003, China
| | - Tiezhu Hu
- Center of Wheat Research, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Collaborative Innovation Center of Modern Biological Breeding, Henan Institute of Science and Technology, Xinxiang 450003, China
| | - Zhengang Ru
- Center of Wheat Research, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Key Laboratory of Hybrid Wheat, Henan Institute of Science and Technology, Xinxiang 450003, China; Henan Collaborative Innovation Center of Modern Biological Breeding, Henan Institute of Science and Technology, Xinxiang 450003, China.
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2
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Xu J, Wang T, Wang X, Yan H, Liu P, Hou X, Gao Y, Yang L, Zhang L. Exogenous Eugenol Alleviates Salt Stress in Tobacco Seedlings by Regulating the Antioxidant System and Hormone Signaling. Int J Mol Sci 2024; 25:6771. [PMID: 38928476 PMCID: PMC11203479 DOI: 10.3390/ijms25126771] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/15/2024] [Revised: 06/07/2024] [Accepted: 06/18/2024] [Indexed: 06/28/2024] Open
Abstract
Salt stress seriously affects crop growth, leading to a decline in crop quality and yield. Application of exogenous substances to improve the salt tolerance of crops and promote their growth under salt stress has become a widespread and effective means. Eugenol is a small molecule of plant origin with medicinal properties such as antibacterial, antiviral, and antioxidant properties. In this study, tobacco seedlings were placed in Hoagland's solution containing NaCl in the presence or absence of eugenol, and physiological indices related to stress tolerance were measured along with transcriptome sequencing. The results showed that eugenol improved the growth of tobacco seedlings under salt stress. It promoted carbon and nitrogen metabolism, increased the activities of nitrate reductase (NR), sucrose synthase (SS), and glutamine synthetase (GS) by 31.03, 5.80, and 51.06%. It also activated the enzymatic and non-enzymatic antioxidant systems, reduced the accumulation of reactive oxygen species in the tobacco seedlings, and increased the activities of superoxide dismutase (SOD), peroxidase (POD), catalase (CAT), and ascorbate peroxidase (APX) by 24.38%, 18.22%, 21.60%, and 28.8%, respectively. The content of glutathione (GSH) was increased by 29.49%, and the content of superoxide anion (O2-) and malondialdehyde (MDA) were reduced by 29.83 and 33.86%, respectively. Promoted osmoregulation, the content of Na+ decreased by 34.34, K+ increased by 41.25%, and starch and soluble sugar increased by 7.72% and 25.42%, respectively. It coordinated hormone signaling in seedlings; the content of abscisic acid (ABA) and gibberellic acid 3 (GA3) increased by 51.93% and 266.28%, respectively. The transcriptome data indicated that the differentially expressed genes were mainly enriched in phenylpropanoid biosynthesis, the MAPK signaling pathway, and phytohormone signal transduction pathways. The results of this study revealed the novel role of eugenol in regulating plant resistance and provided a reference for the use of exogenous substances to alleviate salt stress.
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Affiliation(s)
| | | | | | | | | | | | | | - Long Yang
- College of Plant Protection, Shandong Agricultural University, Taian 271000, China; (J.X.); (T.W.); (X.W.); (H.Y.); (P.L.); (X.H.); (Y.G.)
| | - Li Zhang
- College of Plant Protection, Shandong Agricultural University, Taian 271000, China; (J.X.); (T.W.); (X.W.); (H.Y.); (P.L.); (X.H.); (Y.G.)
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Foyer CH, Kunert K. The ascorbate-glutathione cycle coming of age. JOURNAL OF EXPERIMENTAL BOTANY 2024; 75:2682-2699. [PMID: 38243395 PMCID: PMC11066808 DOI: 10.1093/jxb/erae023] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 10/31/2023] [Accepted: 01/16/2024] [Indexed: 01/21/2024]
Abstract
Concepts regarding the operation of the ascorbate-glutathione cycle and the associated water/water cycle in the processing of metabolically generated hydrogen peroxide and other forms of reactive oxygen species (ROS) are well established in the literature. However, our knowledge of the functions of these cycles and their component enzymes continues to grow and evolve. Recent insights include participation in the intrinsic environmental and developmental signalling pathways that regulate plant growth, development, and defence. In addition to ROS processing, the enzymes of the two cycles not only support the functions of ascorbate and glutathione, they also have 'moonlighting' functions. They are subject to post-translational modifications and have an extensive interactome, particularly with other signalling proteins. In this assessment of current knowledge, we highlight the central position of the ascorbate-glutathione cycle in the network of cellular redox systems that underpin the energy-sensitive communication within the different cellular compartments and integrate plant signalling pathways.
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Affiliation(s)
- Christine H Foyer
- School of Biosciences, College of Life and Environmental Sciences, University of Birmingham, Edgbaston B15 2TT, UK
| | - Karl Kunert
- Department of Plant and Soil Sciences, FABI, University of Pretoria, Pretoria, 2001, South Africa
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4
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Pasternak TP, Steinmacher D. Plant Growth Regulation in Cell and Tissue Culture In Vitro. PLANTS (BASEL, SWITZERLAND) 2024; 13:327. [PMID: 38276784 PMCID: PMC10818547 DOI: 10.3390/plants13020327] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/28/2023] [Revised: 01/17/2024] [Accepted: 01/19/2024] [Indexed: 01/27/2024]
Abstract
Precise knowledge of all aspects controlling plant tissue culture and in vitro plant regeneration is crucial for plant biotechnologists and their correlated industry, as there is increasing demand for this scientific knowledge, resulting in more productive and resilient plants in the field. However, the development and application of cell and tissue culture techniques are usually based on empirical studies, although some data-driven models are available. Overall, the success of plant tissue culture is dependent on several factors such as available nutrients, endogenous auxin synthesis, organic compounds, and environment conditions. In this review, the most important aspects are described one by one, with some practical recommendations based on basic research in plant physiology and sharing our practical experience from over 20 years of research in this field. The main aim is to help new plant biotechnologists and increase the impact of the plant tissue culture industry worldwide.
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Affiliation(s)
- Taras P. Pasternak
- Instituto de Bioingeniería, Universidad Miguel Hernández, 03202 Elche, Spain
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Madhu, Sharma A, Kaur A, Singh K, Upadhyay SK. Modulation in gene expression and enzyme activity suggested the roles of monodehydroascorbate reductase in development and stress response in bread wheat. PLANT SCIENCE : AN INTERNATIONAL JOURNAL OF EXPERIMENTAL PLANT BIOLOGY 2024; 338:111902. [PMID: 37879539 DOI: 10.1016/j.plantsci.2023.111902] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/31/2023] [Revised: 09/23/2023] [Accepted: 10/17/2023] [Indexed: 10/27/2023]
Abstract
Monodehydroascorbate reductase (MDHAR) is a crucial enzymatic antioxidant of the ascorbate-glutathione pathway involved in reactive oxygen species scavenging. Herein, we identified 15 TaMDHAR genes in bread wheat. Phylogenetic analysis revealed their clustering into three groups, which are also related to the subcellular localization in the peroxisome matrix, peroxisome membrane, and chloroplast. Each TaMDHAR protein consisted of two conserved domains; Pyr_redox and Pyr_redox_2 of the pyridine nucleotide disulfide oxidoreductase family. The occurrence of diverse groups of cis-regulatory elements in the promoter region and their interaction with numerous transcription factors suggest assorted functions of TaMDHARs in growth and development and in light, phytohormones, and stress responses. Expression analysis in various tissues further revealed their importance in vegetative and reproductive development. In addition, the differential gene expression and enhanced enzyme activity during drought, heat, and salt treatments exposed their role in abiotic stress response. Interaction of MDHARs with various antioxidant enzymes and biochemicals related to the ascorbate-glutathione cycle exposed their synchronized functioning. Interaction with auxin indicated the probability of cross-talk between antioxidants and auxin signaling. The miR168a, miR169, miR172 and others interaction with various TaMDHARs further directed their association with developmental processes and stress responses. The current study provides extensive information about the importance of TaMDHARs, moreover, the precise role of each gene needs to be established in future studies.
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Affiliation(s)
- Madhu
- Department of Botany, Panjab University, Chandigarh 160014, India
| | - Alok Sharma
- Department of Botany, Panjab University, Chandigarh 160014, India
| | - Amandeep Kaur
- Department of Botany, Panjab University, Chandigarh 160014, India
| | - Kashmir Singh
- Department of Biotechnology, Panjab University, Chandigarh 160014, India
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Wu J, Luo J, Wang Y, Peng Y, Yang G, Zhu J. Arbuscular mycorrhiza augments aluminum tolerance in white clover ( Trifoliumrepens L.) by strengthening the ascorbate-glutathione cycle and phosphorus acquisition. PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS : AN INTERNATIONAL JOURNAL OF FUNCTIONAL PLANT BIOLOGY 2023; 29:1647-1661. [PMID: 38162922 PMCID: PMC10754793 DOI: 10.1007/s12298-023-01369-7] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/04/2023] [Revised: 09/22/2023] [Accepted: 10/06/2023] [Indexed: 01/03/2024]
Abstract
The ascorbate-glutathione (AsA-GSH) cycle is essential for detoxifying reactive oxygen species (ROS) under environmental stresses. The toxicity of aluminum (Al) limits the growth and performance of cultivated plants in acidic soil. However, there is limited information available on the relationship between arbuscular mycorrhizal symbiosis and the AsA-GSH cycle in host plants under Al stress. This study aimed to examine the impact of arbuscular mycorrhizal fungi (AMF), specifically Funneliformis mosseae, on the growth, antioxidant enzymes, components of the AsA-GSH cycle, and stress response gene expressions in white clover (Trifolium repens L.) under Al stress. Our findings demonstrate that AMF inoculation significantly reduced Al accumulation and increased phosphorus (P) content in the roots of white clover, thereby promoting plant biomass accumulation and mycorrhizal colonization under Al stress. AMF effectively scavenged Al-induced ROS (H2O2 and O2-) by enhancing the activities of antioxidant enzymes, including superoxide dismutase (SOD), peroxidase (POD), and catalase (CAT), as well as the components of the AsA-GSH cycle (e.g., enzymes and antioxidants) in the leaves and roots of white clover plants. Additionally, the mitigating effect of AMF was associated with the upregulation of genes involved in P transport (PHO1-2 and PHT1-7), the AsA-GSH pathway (GST-2 and APX-2), and Al stress (ALMT1) in white clover roots compared to control plants. Principal component analysis revealed that 65.9% of the total variance was explained by the first principal component. Dry mass showed a positive correlation with POD and P content, while exhibiting a highly negative correlation with ROS, antioxidant physiology index, Al content, and the expression of related genes in white clover. Overall, this study suggests that AMF enhances the tolerance of white clover to Al stress by improving P uptake and strengthening the AsA-GSH cycle. Graphical Abstract
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Affiliation(s)
- Juyang Wu
- School of Horticulture and Forestry, Hubei University for Nationalities, Enshi, 445000 China
- Key Laboratory of Biological Resources Conservation and Utilization of Hubei Province, Enshi, 445000 China
| | - Jie Luo
- School of Yuanpei, Shaoxing University, Shaoxing, 312000 China
| | - Yibing Wang
- School of Life and Environmental Sciences, Shaoxing University, Shaoxing, 312000 China
| | - Yulun Peng
- School of Life and Environmental Sciences, Shaoxing University, Shaoxing, 312000 China
| | - Guo Yang
- School of Life and Environmental Sciences, Shaoxing University, Shaoxing, 312000 China
| | - Jiang Zhu
- School of Horticulture and Forestry, Hubei University for Nationalities, Enshi, 445000 China
- Key Laboratory of Biological Resources Conservation and Utilization of Hubei Province, Enshi, 445000 China
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Pasternak T, Palme K, Pérez-Pérez JM. Role of reactive oxygen species in the modulation of auxin flux and root development in Arabidopsis thaliana. THE PLANT JOURNAL : FOR CELL AND MOLECULAR BIOLOGY 2023; 114:83-95. [PMID: 36700340 DOI: 10.1111/tpj.16118] [Citation(s) in RCA: 2] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/29/2022] [Revised: 01/08/2023] [Accepted: 01/14/2023] [Indexed: 06/17/2023]
Abstract
Reactive oxygen species (ROS) play a dual role in plant biology, acting as important signal transduction molecules and as toxic byproducts of aerobic metabolism that accumulate in cells upon exposure to different stressors and lead to cell death. In plants, root architecture is regulated by the distribution and intercellular flow of the phytohormone auxin. In this study, we identified ROS as an important modulator of auxin distribution and response in the root. ROS production is necessary for root growth, proper tissue patterning, cell growth, and lateral root (LR) induction. Alterations in ROS balance led to altered auxin distribution and response in SOD and RHD2 loss-of-function mutants. Treatment of Arabidopsis seedlings with additional sources of ROS (hydrogen peroxide) or an ROS production inhibitor (diphenylene iodonium) induced phenocopies of the mutants studied. Simultaneous application of auxin and ROS increased LR primordia induction, and PIN-FORMED protein immunolocalization further demonstrated the existing link between auxin and ROS in orchestrating cell division and auxin flux during root development. In Arabidopsis roots, genetic alterations in ROS balance led to defective auxin distribution and growth-related responses in roots. Exogenous hydrogen peroxide alters the establishment of the endogenous auxin gradient in the root meristem through regulation of PIN-FORMED polarity, while the simultaneous application of hydrogen peroxide and auxin enhanced LR induction in a dose- and position-dependent manner through activation of cell division.
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Affiliation(s)
- Taras Pasternak
- Faculty of Biology, Institute of Biology II/Molecular Plant Physiology, University of Freiburg, 79104, Freiburg, Germany
- Instituto de Bioingeniería, Universidad Miguel Hernández, 03202, Elche, Spain
| | - Klaus Palme
- Faculty of Biology, Institute of Biology II/Molecular Plant Physiology, University of Freiburg, 79104, Freiburg, Germany
- Centre for BioSystems Analysis, BIOSS Centre for Biological Signalling Studies, University of Freiburg, 79104, Freiburg, Germany
- State Key Laboratory of Crop Biology, College of Life Sciences, Shandong Agricultural University, Daizong Street 61, Tai'an, 271018, China
- ScreenSYS GmbH, Engesserstr. 4, Freiburg, 79108, Germany
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Dopamine Inhibits Arabidopsis Growth through Increased Oxidative Stress and Auxin Activity. STRESSES 2023. [DOI: 10.3390/stresses3010026] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 03/06/2023]
Abstract
Like some bacterial species and all animals, plants synthesize dopamine and react to its exogenous applications. Despite dopamine’s widespread presence and activity in plants, its role in plant physiology is still poorly understood. Using targeted experimentation informed by the transcriptomic response to dopamine exposure, we identify three major effects of dopamine. First, we show that dopamine causes hypersensitivity to auxin indole-3-acetic acid by enhancing auxin activity. Second, we show that dopamine increases oxidative stress, which can be mitigated with glutathione. Third, we find that dopamine downregulates iron uptake mechanisms, leading to a decreased iron content—a response possibly aimed at reducing DA-induced oxidative stress. Finally, we show that dopamine-induced auxin sensitivity is downstream of glutathione biosynthesis, indicating that the auxin response is likely a consequence of DA-induced oxidative stress. Collectively, our results show that exogenous dopamine increases oxidative stress, which inhibits growth both directly and indirectly by promoting glutathione-biosynthesis-dependent auxin hypersensitivity.
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Rai GK, Kumar P, Choudhary SM, Singh H, Adab K, Kosser R, Magotra I, Kumar RR, Singh M, Sharma R, Corrado G, Rouphael Y. Antioxidant Potential of Glutathione and Crosstalk with Phytohormones in Enhancing Abiotic Stress Tolerance in Crop Plants. PLANTS (BASEL, SWITZERLAND) 2023; 12:1133. [PMID: 36903992 PMCID: PMC10005112 DOI: 10.3390/plants12051133] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Subscribe] [Scholar Register] [Received: 01/30/2023] [Revised: 02/19/2023] [Accepted: 02/27/2023] [Indexed: 06/18/2023]
Abstract
Glutathione (GSH) is an abundant tripeptide that can enhance plant tolerance to biotic and abiotic stress. Its main role is to counter free radicals and detoxify reactive oxygen species (ROS) generated in cells under unfavorable conditions. Moreover, along with other second messengers (such as ROS, calcium, nitric oxide, cyclic nucleotides, etc.), GSH also acts as a cellular signal involved in stress signal pathways in plants, directly or along with the glutaredoxin and thioredoxin systems. While associated biochemical activities and roles in cellular stress response have been widely presented, the relationship between phytohormones and GSH has received comparatively less attention. This review, after presenting glutathione as part of plants' feedback to main abiotic stress factors, focuses on the interaction between GSH and phytohormones, and their roles in the modulation of the acclimatation and tolerance to abiotic stress in crops plants.
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Affiliation(s)
- Gyanendra Kumar Rai
- School of Biotechnology, Sher-e-Kashmir University of Agricultural Sciences and Technology of Jammu, Jammu 180009, India
| | - Pradeep Kumar
- Division of Integrated Farming System, ICAR—Central Arid Zone Research Institute, Jodhpur 342003, India
| | - Sadiya M. Choudhary
- School of Biotechnology, Sher-e-Kashmir University of Agricultural Sciences and Technology of Jammu, Jammu 180009, India
| | - Hira Singh
- Department of Vegetable Science, Punjab Agricultural University, Ludhiana 141004, India
| | - Komal Adab
- Department of Biotechnology, BGSB University, Rajouri 185131, India
| | - Rafia Kosser
- School of Biotechnology, Sher-e-Kashmir University of Agricultural Sciences and Technology of Jammu, Jammu 180009, India
| | - Isha Magotra
- School of Biotechnology, Sher-e-Kashmir University of Agricultural Sciences and Technology of Jammu, Jammu 180009, India
| | - Ranjeet Ranjan Kumar
- Division of Biochemistry, ICAR—Indian Agricultural Research Institute, New Delhi 110001, India
| | - Monika Singh
- GLBajaj Institute of Technology and Management, Greater Noida 201306, India
| | - Rajni Sharma
- Department of Agronomy, Punjab Agricultural University, Ludhiana 141004, India
| | - Giandomenico Corrado
- Department of Agricultural Sciences, University of Naples Federico II, 80055 Portici, Italy
| | - Youssef Rouphael
- Department of Agricultural Sciences, University of Naples Federico II, 80055 Portici, Italy
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Tripathi DK, Rai P, Kandhol N, Kumar A, Sahi S, Corpas FJ, Sharma S, Singh VP. Silicon Palliates Chromium Toxicity through the Formation of Root Hairs in Rice (Oryza sativa) Mediated by GSH and IAA. PLANT & CELL PHYSIOLOGY 2023; 63:1943-1953. [PMID: 36264202 DOI: 10.1093/pcp/pcac150] [Citation(s) in RCA: 5] [Impact Index Per Article: 5.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 04/07/2022] [Revised: 09/27/2022] [Accepted: 10/19/2022] [Indexed: 06/16/2023]
Abstract
Along with the rapidly increasing environmental contamination by heavy metals, the exposure of plants to chromium has also magnified, resulting in a declined productivity. Hexavalent chromium [Cr(VI)], the most toxic form of Cr, brings about changes in plant processes at morpho-physiological and biochemical levels. However, silicon (Si) is known to mitigate the impact of abiotic stresses in plants. Here, we demonstrate Si-mediated alleviation of Cr(VI) toxicity and its effects on root hair formation in rice seedlings. Reduced glutathione (GSH) and indole-3 acetic acid (IAA, an important auxin) were assessed for their involvement in root hair formation after the application of Si to Cr(VI)-stressed plants, and our results confirmed their crucial significance in such developmental processes. The expression analysis of genes involved in GSH biosynthesis (OsGS2) and regeneration (OsGR1), and auxin biosynthesis (OsTAA1 and OsYUCCA1) and transport (OsAUX1 and OsPIN1) corroborated their positive role in Si-mediated root hair formation in Cr(VI)-stressed rice seedlings. Moreover, the results indicated that nitric oxide (NO) seems a probable but not fundamental component in Si-mediated formation of roots in rice during exposure to Cr(VI) stress. In this study, the indispensable role of GSH and IAA, redox homeostasis of GSH and IAA biosynthesis and transport are discussed with regard to Si-mediated formation of root hairs in rice under Cr(VI) stress. The results of the study suggest that Si is a protective agent against Cr(VI) stress in rice, and the findings can be used to develop Cr(VI) stress-tolerant varieties of rice with enhanced productivity.
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Affiliation(s)
- Durgesh Kumar Tripathi
- Crop Nanobiology and Molecular Stress Physiology Lab, Amity Institute of Organic Agriculture, Amity University Uttar Pradesh, Sector-125, Noida 201313, India
| | - Padmaja Rai
- Department of Biotechnology, Motilal Nehru National Institute of Technology Allahabad, Prayagraj, UP 211004, India
| | - Nidhi Kandhol
- Crop Nanobiology and Molecular Stress Physiology Lab, Amity Institute of Organic Agriculture, Amity University Uttar Pradesh, Sector-125, Noida 201313, India
| | - Alok Kumar
- Crop Nanobiology and Molecular Stress Physiology Lab, Amity Institute of Organic Agriculture, Amity University Uttar Pradesh, Sector-125, Noida 201313, India
| | - Shivendra Sahi
- Department of Biology, Saint Joseph's University, University City Campus, 600 S. 43rd St., Philadelphia, PA 19104, USA
| | - Francisco J Corpas
- Department of Stress, Development and Signaling in Plants, Group of Antioxidants, Free Radicals and Nitric Oxide in Biotechnology, Food and Agriculture, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas (CSIC), Profesor Albareda 1, Granada 18008, Spain
| | - Shivesh Sharma
- Department of Biotechnology, Motilal Nehru National Institute of Technology Allahabad, Prayagraj, UP 211004, India
| | - Vijay Pratap Singh
- Plant Physiology Laboratory, Department of Botany, C.M.P. Degree College, A Constituent Post Graduate College of University of Allahabad, Prayagraj 211002, India
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Cantabella D, Karpinska B, Teixidó N, Dolcet-Sanjuan R, Foyer CH. Non-volatile signals and redox mechanisms are required for the responses of Arabidopsis roots to Pseudomonas oryzihabitans. JOURNAL OF EXPERIMENTAL BOTANY 2022; 73:6971-6982. [PMID: 36001048 DOI: 10.1093/jxb/erac346] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 05/06/2022] [Accepted: 08/23/2022] [Indexed: 06/15/2023]
Abstract
Soil bacteria promote plant growth and protect against environmental stresses, but the mechanisms involved remain poorly characterized, particularly when there is no direct contact between the roots and bacteria. Here, we explored the effects of Pseudomonas oryzihabitans PGP01 on the root system architecture (RSA) in Arabidopsis thaliana seedlings. Significant increases in lateral root (LR) density were observed when seedlings were grown in the presence of P. oryzihabitans, as well as an increased abundance of transcripts associated with altered nutrient transport and phytohormone responses. However, no bacterial transcripts were detected on the root samples by RNAseq analysis, demonstrating that the bacteria do not colonize the roots. Separating the agar containing bacteria from the seedlings prevented the bacteria-induced changes in RSA. Bacteria-induced changes in RSA were absent from mutants defective in ethylene response factor (ERF109), glutathione synthesis (pad2-1, cad2-1, and rax1-1) and in strigolactone synthesis (max3-9 and max4-1) or signalling (max2-3). However, the P. oryzihabitans-induced changes in RSA were similar in the low ascorbate mutants (vtc2-1and vtc2-2) to the wild-type controls. Taken together, these results demonstrate the importance of non-volatile signals and redox mechanisms in the root architecture regulation that occurs following long-distance perception of P. oryzihabitans.
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Affiliation(s)
- Daniel Cantabella
- Institute of Research and Agrofood technology (IRTA) Postharvest Program, Edifici Fruitcentre, Parc Científic i Tecnològic Agroalimentari de Lleida, 25003 Lleida, Catalonia, Spain
- IRTA, Plant In Vitro Culture Laboratory, Fruticulture Program, Barcelona, Spain
- School of Biosciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK
| | - Barbara Karpinska
- School of Biosciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK
| | - Neus Teixidó
- Institute of Research and Agrofood technology (IRTA) Postharvest Program, Edifici Fruitcentre, Parc Científic i Tecnològic Agroalimentari de Lleida, 25003 Lleida, Catalonia, Spain
| | | | - Christine H Foyer
- School of Biosciences, University of Birmingham, Edgbaston, Birmingham B15 2TT, UK
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12
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Dimitrova A, Sferra G, Scippa GS, Trupiano D. Network-Based Analysis to Identify Hub Genes Involved in Spatial Root Response to Mechanical Constrains. Cells 2022; 11:cells11193121. [PMID: 36231084 PMCID: PMC9564363 DOI: 10.3390/cells11193121] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 08/29/2022] [Revised: 09/29/2022] [Accepted: 09/30/2022] [Indexed: 11/16/2022] Open
Abstract
Previous studies report that the asymmetric response, observed along the main poplar woody bent root axis, was strongly related to both the type of mechanical forces (compression or tension) and the intensity of force displacement. Despite a large number of targets that have been proposed to trigger this asymmetry, an understanding of the comprehensive and synergistic effect of the antistress spatially related pathways is still lacking. Recent progress in the bioinformatics area has the potential to fill these gaps through the use of in silico studies, able to investigate biological functions and pathway overlaps, and to identify promising targets in plant responses. Presently, for the first time, a comprehensive network-based analysis of proteomic signatures was used to identify functions and pivotal genes involved in the coordinated signalling pathways and molecular activities that asymmetrically modulate the response of different bent poplar root sectors and sides. To accomplish this aim, 66 candidate proteins, differentially represented across the poplar bent root sides and sectors, were grouped according to their abundance profile patterns and mapped, together with their first neighbours, on a high-confidence set of interactions from STRING to compose specific cluster-related subnetworks (I–VI). Successively, all subnetworks were explored by a functional gene set enrichment analysis to identify enriched gene ontology terms. Subnetworks were then analysed to identify the genes that are strongly interconnected with other genes (hub gene) and, thus, those that have a pivotal role in the bent root asymmetric response. The analysis revealed novel information regarding the response coordination, communication, and potential signalling pathways asymmetrically activated along the main root axis, delegated mainly to Ca2+ (for new lateral root formation) and ROS (for gravitropic response and lignin accumulation) signatures. Furthermore, some of the data indicate that the concave side of the bent sector, where the mechanical forces are most intense, communicates to the other (neighbour and distant) sectors, inducing spatially related strategies to ensure water uptake and accompanying cell modification. This information could be critical for understanding how plants maintain and improve their structural integrity—whenever and wherever it is necessary—in natural mechanical stress conditions.
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13
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Martin RE, Postiglione AE, Muday GK. Reactive oxygen species function as signaling molecules in controlling plant development and hormonal responses. CURRENT OPINION IN PLANT BIOLOGY 2022; 69:102293. [PMID: 36099672 PMCID: PMC10475289 DOI: 10.1016/j.pbi.2022.102293] [Citation(s) in RCA: 14] [Impact Index Per Article: 7.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Subscribe] [Scholar Register] [Received: 02/27/2022] [Revised: 07/05/2022] [Accepted: 07/27/2022] [Indexed: 06/15/2023]
Abstract
Reactive oxygen species (ROS) serve as second messengers in plant signaling pathways to remodel plant growth and development. New insights into how enzymatic ROS-producing machinery is regulated by hormones or localized during development have provided a framework for understanding the mechanisms that control ROS accumulation patterns. Signaling-mediated increases in ROS can then modulate the activity of proteins through reversible oxidative modification of specific cysteine residues. Plants also control the synthesis of antioxidants, including plant-specialized metabolites, to further define when, where, and how much ROS accumulate. The availability of sophisticated imaging capabilities, combined with a growing tool kit of ROS detection technologies, particularly genetically encoded biosensors, sets the stage for improved understanding of ROS as signaling molecules.
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Affiliation(s)
- R Emily Martin
- Department of Biochemistry, Wake Forest School of Medicine, Winston-Salem, NC, 27101, USA; Department of Biology and the Center for Molecular Signaling, Wake Forest University, Winston-Salem, NC, 27109, USA
| | - Anthony E Postiglione
- Department of Biology and the Center for Molecular Signaling, Wake Forest University, Winston-Salem, NC, 27109, USA
| | - Gloria K Muday
- Department of Biochemistry, Wake Forest School of Medicine, Winston-Salem, NC, 27101, USA; Department of Biology and the Center for Molecular Signaling, Wake Forest University, Winston-Salem, NC, 27109, USA.
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14
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Zein El Din AFM, Darwesh RSS, Ibrahim MFM, Salama GMY, Shams El-Din IM, Abdelaal WB, Ali GA, Elsayed MS, Ismail IA, Dessoky ES, Abdellatif YMR. Antioxidants Application Enhances Regeneration and Conversion of Date Palm (Phoenix dactylifera L.) Somatic Embryos. PLANTS 2022; 11:plants11152023. [PMID: 35956500 PMCID: PMC9370564 DOI: 10.3390/plants11152023] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 07/04/2022] [Revised: 07/30/2022] [Accepted: 07/31/2022] [Indexed: 11/16/2022]
Abstract
Many embryogenic systems have been designed to generate somatic embryos (SEs) with the morphology, biochemistry, and vigor uniformity of zygotic embryos (ZEs). During the current investigation, several antioxidants were added to the maturation media of the developing somatic embryos of date palm. Explant material was a friable embryogenic callus that was placed in maturation media containing ABA at 0.5 mg L−1, 5 g L−1 polyethylene glycol, and 10 g L−1 phytagel. Furthermore, α-tocopherol or reduced glutathione (GSH) were used separately at (25 and 50 mg L−1). These treatments were compared to a widely used date palm combination of reduced ascorbic acid (ASC) and citric acid at 150 and 100 mg L−1, respectively, and to the medium free from any antioxidants. The relative growth percentage of embryogenic callus (EC), globularization degree, differentiation%, and SEs number were significantly increased with GSH (50 mg L−1). Additionally, the latter treatment significantly enhanced the conversion% of SEs and the number of secondary somatic embryos (SSEs). ASC and citric acid treatment increased leaf length, while α-tochopherol (50 mg L−1) elevated the number of leaves plantlet−1. GSH at 50 mg L−1 catalyzed the activities of polyphenol oxidase (PPO) and peroxidase (POD) in EC and enhanced the accumulation of proteins in SEs.
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Affiliation(s)
- Amal F. M. Zein El Din
- The Central Laboratory for Date Palm Researches and Development, Agricultural Research Center, Giza 12619, Egypt; (A.F.M.Z.E.D.); (R.S.S.D.); (I.M.S.E.-D.); (W.B.A.); (G.A.A.); (M.S.E.)
| | - Rasmia S. S. Darwesh
- The Central Laboratory for Date Palm Researches and Development, Agricultural Research Center, Giza 12619, Egypt; (A.F.M.Z.E.D.); (R.S.S.D.); (I.M.S.E.-D.); (W.B.A.); (G.A.A.); (M.S.E.)
| | - Mohamed F. M. Ibrahim
- Department of Agricultural Botany, Faculty of Agriculture, Ain Shams University, Cairo 11566, Egypt;
- Correspondence: ; Tel.: +2-011-23403173
| | - Gehan M. Y. Salama
- Botanical Garden Research Department, Horticulture Research institute (HRI). Agricultural ResearchCenter (ARC), Giza 12619, Egypt;
| | - Ibrahim M. Shams El-Din
- The Central Laboratory for Date Palm Researches and Development, Agricultural Research Center, Giza 12619, Egypt; (A.F.M.Z.E.D.); (R.S.S.D.); (I.M.S.E.-D.); (W.B.A.); (G.A.A.); (M.S.E.)
| | - Walid B. Abdelaal
- The Central Laboratory for Date Palm Researches and Development, Agricultural Research Center, Giza 12619, Egypt; (A.F.M.Z.E.D.); (R.S.S.D.); (I.M.S.E.-D.); (W.B.A.); (G.A.A.); (M.S.E.)
| | - Ghada A. Ali
- The Central Laboratory for Date Palm Researches and Development, Agricultural Research Center, Giza 12619, Egypt; (A.F.M.Z.E.D.); (R.S.S.D.); (I.M.S.E.-D.); (W.B.A.); (G.A.A.); (M.S.E.)
| | - Maha S. Elsayed
- The Central Laboratory for Date Palm Researches and Development, Agricultural Research Center, Giza 12619, Egypt; (A.F.M.Z.E.D.); (R.S.S.D.); (I.M.S.E.-D.); (W.B.A.); (G.A.A.); (M.S.E.)
| | - Ismail A. Ismail
- Department of Biology, College of Science, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia; (I.A.I.); (E.S.D.)
| | - Eldessoky S. Dessoky
- Department of Biology, College of Science, Taif University, P.O. Box 11099, Taif 21944, Saudi Arabia; (I.A.I.); (E.S.D.)
| | - Yasmin M. R. Abdellatif
- Department of Agricultural Botany, Faculty of Agriculture, Ain Shams University, Cairo 11566, Egypt;
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15
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Transcription Profile of Auxin Related Genes during Positively Gravitropic Hypocotyl Curvature of Brassica rapa. PLANTS 2022; 11:plants11091191. [PMID: 35567192 PMCID: PMC9105288 DOI: 10.3390/plants11091191] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/23/2022] [Revised: 04/19/2022] [Accepted: 04/25/2022] [Indexed: 11/20/2022]
Abstract
Unlike typical negative gravitropic curvature, young hypocotyls of Brassica rapa and other dicots exhibit positive gravitropism. This positive curvature occurs at the base of the hypocotyl and is followed by the typical negative gravity-induced curvature. We investigated the role of auxin in both positive and negative hypocotyl curvature by examining the transcription of PIN1, PIN3, IAA5 and ARG1 in curving tissue. We compared tissue extraction of the convex and concave flank with Solid Phase Gene Extraction (SPGE). Based on Ubiquitin1 (UBQ1) as a reference gene, the log (2) fold change of all examined genes was determined. Transcription of the examined genes varied during the graviresponse suggesting that these genes affect differential elongation. The transcription of all genes was upregulated in the lower flank and downregulated in the upper flank during the initial downward curving period. After 48 h, the transcription profile reversed, suggesting that the ensuing negative gravicurvature is controlled by the same genes as the positive gravicurvature. High-spatial resolution profiling using SPGE revealed that the transcription profile of the examined genes was spatially distinct within the curving tissue. The comparison of the hypocotyl transcription profile with the root tip indicated that the tip tissue is a suitable reference for curving hypocotyls and that root and hypocotyl curvature are controlled by the same physiological processes.
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16
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Zhou X, Li M, Cheng Q, Shao Y, Wang W, Du Q, Liu J, Yang Y. Methylselenocysteine Potentiates Etoposide-Induced Cytotoxicity by Enhancing Gap Junction Activity. Biol Pharm Bull 2022; 45:467-476. [DOI: 10.1248/bpb.b21-00893] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 01/10/2023]
Affiliation(s)
- Xueli Zhou
- Department of Medical Oncology, The First Affiliated Hospital of Bengbu Medical College
| | - Man Li
- Department of Medical Oncology, The First Affiliated Hospital of Bengbu Medical College
| | - Qianqian Cheng
- Department of Medical Oncology, The First Affiliated Hospital of Bengbu Medical College
| | - Yu Shao
- Department of Medical Oncology, The First Affiliated Hospital of Bengbu Medical College
| | - Wei Wang
- Department of Medical Oncology, The First Affiliated Hospital of Bengbu Medical College
| | - Qianyu Du
- Department of Medical Oncology, The First Affiliated Hospital of Bengbu Medical College
| | - Jing Liu
- Department of Medical Oncology, The First Affiliated Hospital of Bengbu Medical College
| | - Yan Yang
- Department of Medical Oncology, The First Affiliated Hospital of Bengbu Medical College
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17
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Pasternak T, Paponov IA, Kondratenko S. Optimizing Protocols for Arabidopsis Shoot and Root Protoplast Cultivation. PLANTS 2021; 10:plants10020375. [PMID: 33672063 PMCID: PMC7919498 DOI: 10.3390/plants10020375] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 12/13/2020] [Revised: 01/26/2021] [Accepted: 02/10/2021] [Indexed: 11/16/2022]
Abstract
Procedures for the direct regeneration of entire plants from a shoot and root protoplasts of Arabidopsis thaliana have been optimized. The culture media for protoplast donor-plant cultivation and protoplast culture have been adjusted for optimal plant growth, plating efficiency, and promotion of shoot regeneration. Protocols have been established for the detection of all three steps in plant regeneration: (i) chromatin relaxation and activation of auxin biosynthesis, (ii) cell cycle progression, and (iii) conversion of cell-cycle active cells to totipotent ones. The competence for cell division was detected by DNA replication events and required high cell density and high concentrations of the auxinic compound 2,4-D. Cell cycle activity and globular structure formation, with subsequent shoot induction, were detected microscopically and by labeling with fluorescent dye Rhodamine123. The qPCR results demonstrated significantly upregulated expression of the genes responsible for nuclear reorganization, auxin responses, and auxin biosynthesis during the early stage of cell reprogramming. We further optimized cell reprogramming with this protocol by applying glutathione (GSH), which increases the sensitivity of isolated mesophyll protoplasts to cell cycle activation by auxin. The developed protocol allows us to investigate the molecular mechanism of the de-differentiation of somatic plant cells.
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Affiliation(s)
- Taras Pasternak
- Institute of Biology II/Molecular Plant Physiology, Centre for BioSystems Analysis, BIOSS Centre for Biological Signalling Studies University of Freiburg, 79104 Freiburg, Germany
- Correspondence: (T.P.); (S.K.)
| | - Ivan A. Paponov
- Department of Food Science, Aarhus University, 8200 Aarhus, Denmark;
| | - Serhii Kondratenko
- Institute of Vegetables and Melon Growing of National Academy of Agricultural Sciences of Ukraine, 62478 Kharkiv, Ukraine
- Correspondence: (T.P.); (S.K.)
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