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Peng Y, Hu Z, Dong W, Wu X, Liu C, Zhu R, Wang J, Yang M, Qi Z, Zhao Y, Zou J, Wu X, Bi Y, Hu L, Ratet P, Chen Q, Xin D. Wild rodents seed choice is relevant for sustainable agriculture. Sci Rep 2024; 14:15994. [PMID: 38987328 PMCID: PMC11237120 DOI: 10.1038/s41598-024-67057-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Grants] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 01/18/2024] [Accepted: 07/08/2024] [Indexed: 07/12/2024] Open
Abstract
Mitigating pre-harvest sprouting (PHS) and post-harvest food loss (PHFL) is essential for enhancing food securrity. To reduce food loss, the use of plant derived specialized metabolites can represent a good approach to develop a more eco-friendly agriculture. Here, we have discovered that soybean seeds hidden underground during winter by Tscherskia triton and Apodemus agrarius during winter possess a higher concentration of volatile organic compounds (VOCs) compared to those remaining exposed in fields. This selection by rodents suggests that among the identified volatiles, 3-FurAldehyde (Fur) and (E)-2-Heptenal (eHep) effectively inhibit the growth of plant pathogens such as Aspergillus flavus, Alternaria alternata, Fusarium solani and Pseudomonas syringae. Additionally, compounds such as Camphene (Cam), 3-FurAldehyde, and (E)-2-Heptenal, suppress the germination of seeds in crops including soybean, rice, maize, and wheat. Importantly, some of these VOCs also prevent rice seeds from pre-harvest sprouting. Consequently, our findings offer straightforward and practical approaches to seed protection and the reduction of PHS and PHFL, indicating potential new pathways for breeding, and reducing both PHS and pesticide usage in agriculture.
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Affiliation(s)
- Yang Peng
- National Key Laboratory of Smart Farm Technologies and Systems, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin, 150030, People's Republic of China
| | - Zhenbang Hu
- National Key Laboratory of Smart Farm Technologies and Systems, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin, 150030, People's Republic of China
| | - Wen Dong
- National Key Laboratory of Smart Farm Technologies and Systems, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin, 150030, People's Republic of China
| | - Xiaodong Wu
- National Key Laboratory of Smart Farm Technologies and Systems, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin, 150030, People's Republic of China
| | - Chunyan Liu
- National Key Laboratory of Smart Farm Technologies and Systems, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin, 150030, People's Republic of China
| | - Rongsheng Zhu
- National Key Laboratory of Smart Farm Technologies and Systems, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin, 150030, People's Republic of China
| | - Jinhui Wang
- National Key Laboratory of Smart Farm Technologies and Systems, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin, 150030, People's Republic of China
| | - Mingliang Yang
- National Key Laboratory of Smart Farm Technologies and Systems, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin, 150030, People's Republic of China
| | - Zhaoming Qi
- National Key Laboratory of Smart Farm Technologies and Systems, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin, 150030, People's Republic of China
| | - Ying Zhao
- National Key Laboratory of Smart Farm Technologies and Systems, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin, 150030, People's Republic of China
| | - Jianan Zou
- National Key Laboratory of Smart Farm Technologies and Systems, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin, 150030, People's Republic of China
| | - Xiaoxia Wu
- National Key Laboratory of Smart Farm Technologies and Systems, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin, 150030, People's Republic of China
| | - Yingdong Bi
- Institute of Crop Cultivation and Tillage, Heilongjiang Academy of Agricultural Sciences, Harbin, 150028, Heilongjiang,, China
| | - Limin Hu
- National Key Laboratory of Smart Farm Technologies and Systems, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin, 150030, People's Republic of China
| | - Pascal Ratet
- Université Paris-Saclay, CNRS, INRAE, Univ Evry, Institute of Plant Sciences Paris-Saclay (IPS2), 91190, Gif sur Yvette, France.
- Institute of Plant Sciences Paris-Saclay (IPS2), Université de Paris, 91190, Gif sur Yvette, France.
| | - Qingshan Chen
- National Key Laboratory of Smart Farm Technologies and Systems, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin, 150030, People's Republic of China.
| | - Dawei Xin
- National Key Laboratory of Smart Farm Technologies and Systems, Key Laboratory of Soybean Biology in Chinese Ministry of Education, College of Agriculture, Northeast Agricultural University, Harbin, 150030, People's Republic of China.
- Université Paris-Saclay, CNRS, INRAE, Univ Evry, Institute of Plant Sciences Paris-Saclay (IPS2), 91190, Gif sur Yvette, France.
- Institute of Plant Sciences Paris-Saclay (IPS2), Université de Paris, 91190, Gif sur Yvette, France.
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Ahmadi-Ochtapeh H, Soltanloo H, Ramezanpour SS, Yamchi A, Shariati V. RNA-Seq transcriptome profiling of immature grain wheat is a technique for understanding comparative modeling of baking quality. Sci Rep 2024; 14:10940. [PMID: 38740888 DOI: 10.1038/s41598-024-61528-y] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2023] [Accepted: 05/07/2024] [Indexed: 05/16/2024] Open
Abstract
Improving the baking quality is a primary challenge in the wheat flour production value chain, as baking quality represents a crucial factor in determining its overall value. In the present study, we conducted a comparative RNA-Seq analysis on the high baking quality mutant "O-64.1.10" genotype and its low baking quality wild type "Omid" cultivar to recognize potential genes associated with bread quality. The cDNA libraries were constructed from immature grains that were 15 days post-anthesis, with an average of 16.24 and 18.97 million paired-end short-read sequences in the mutant and wild-type, respectively. A total number of 733 transcripts with differential expression were identified, 585 genes up-regulated and 188 genes down-regulated in the "O-64.1.10" genotype compared to the "Omid". In addition, the families of HSF, bZIP, C2C2-Dof, B3-ARF, BES1, C3H, GRF, HB-HD-ZIP, PLATZ, MADS-MIKC, GARP-G2-like, NAC, OFP and TUB were appeared as the key transcription factors with specific expression in the "O-64.1.10" genotype. At the same time, pathways related to baking quality were identified through Kyoto Encyclopedia of Genes and Genomes. Collectively, we found that the endoplasmic network, metabolic pathways, secondary metabolite biosynthesis, hormone signaling pathway, B group vitamins, protein pathways, pathways associated with carbohydrate and fat metabolism, as well as the biosynthesis and metabolism of various amino acids, have a great deal of potential to play a significant role in the baking quality. Ultimately, the RNA-seq results were confirmed using quantitative Reverse Transcription PCR for some hub genes such as alpha-gliadin, low molecular weight glutenin subunit and terpene synthase (gibberellin) and as a resource for future study, 127 EST-SSR primers were generated using RNA-seq data.
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Affiliation(s)
- Hossein Ahmadi-Ochtapeh
- Crop and Horticultural Science Research Department, Agricultural Research, Education and Extension Organization (AREEO), Golestan Agricultural and Natural Resources Research and Education Center, Gorgan, Iran
| | - Hassan Soltanloo
- Plant Breeding and Biotechnology Department, Gorgan University of Agricultural Sciences and Natural Resources (GUASNR), Gorgan, Iran.
| | - Seyyede Sanaz Ramezanpour
- Plant Breeding and Biotechnology Department, Gorgan University of Agricultural Sciences and Natural Resources (GUASNR), Gorgan, Iran
| | - Ahad Yamchi
- Plant Breeding and Biotechnology Department, Gorgan University of Agricultural Sciences and Natural Resources (GUASNR), Gorgan, Iran
| | - Vahid Shariati
- Department of Plant Molecular Biotechnology, Assistant Professor in National Institute of Genetic Engineering and Biotechnology, Karaj, Iran
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3
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Cui C, Li F, Zeng Q, Li C, Shen W, Gao X, Li X, Zhao W, Dong J, Li J, Yang M. Influence of Fertilization Methods and Types on Wheat Rhizosphere Microbiome Community and Functions. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 2024; 72:7794-7806. [PMID: 38561246 DOI: 10.1021/acs.jafc.3c09941] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 04/04/2024]
Abstract
To investigate the effects of fertilization methods and types on wheat rhizosphere microorganisms, macroelement (N, K) and microelement (Zn) fertilizers were applied on wheat by foliar spraying (FS) and root irrigation (RI) methods in a field experiment. The results indicated that fertilization methods and types can have significant impacts on the diversity and structure of rhizospheric microorganisms in wheat. The application method produced more significant effects than the fertilizer type. RI-N played a more important role in improving the wheat yield and quality and affected the changes in some nitrogen-fixing bacterial communities. Finally, eight strains of bacteria belonging to Pseudomonas azotoformans and P. cedrina showed positive effects on the growth of wheat seedlings. Overall, our study provides a better understanding of the dynamics of wheat rhizosphere microbial communities and their relation to fertilization, yield, and quality, showing that plant growth-promoting rhizobacteria with nitrogen fixing may be a potential approach for more sustainable agriculture production.
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Affiliation(s)
- Chao Cui
- College of Agronomy, Northwest A&F University, Yangling, Shaanxi 712100, China
- Wheat Engineering Research Center of Shaanxi Province, Yangling 712100, China
| | - Fang Li
- College of Agronomy, Northwest A&F University, Yangling, Shaanxi 712100, China
- Wheat Engineering Research Center of Shaanxi Province, Yangling 712100, China
| | - Quan Zeng
- College of Agronomy, Northwest A&F University, Yangling, Shaanxi 712100, China
- Wheat Engineering Research Center of Shaanxi Province, Yangling 712100, China
| | - Chenyang Li
- College of Agronomy, Northwest A&F University, Yangling, Shaanxi 712100, China
- Wheat Engineering Research Center of Shaanxi Province, Yangling 712100, China
| | - Wei Shen
- College of Agronomy, Northwest A&F University, Yangling, Shaanxi 712100, China
- Wheat Engineering Research Center of Shaanxi Province, Yangling 712100, China
| | - Xiang Gao
- College of Agronomy, Northwest A&F University, Yangling, Shaanxi 712100, China
- Wheat Engineering Research Center of Shaanxi Province, Yangling 712100, China
| | - Xiaoyan Li
- College of Agronomy, Northwest A&F University, Yangling, Shaanxi 712100, China
- Wheat Engineering Research Center of Shaanxi Province, Yangling 712100, China
| | - Wanchun Zhao
- College of Agronomy, Northwest A&F University, Yangling, Shaanxi 712100, China
- Wheat Engineering Research Center of Shaanxi Province, Yangling 712100, China
| | - Jian Dong
- College of Agronomy, Northwest A&F University, Yangling, Shaanxi 712100, China
- Wheat Engineering Research Center of Shaanxi Province, Yangling 712100, China
| | - Jiangang Li
- State Key Laboratory of Soil and Sustainable Agriculture, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, Jiangsu 210008, China
| | - Mingming Yang
- College of Agronomy, Northwest A&F University, Yangling, Shaanxi 712100, China
- Wheat Engineering Research Center of Shaanxi Province, Yangling 712100, China
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Ding J, Hu H, Yang J, Wu T, Sun X, Fang Y, Huang Q. Mechanistic study of the impact of germinated brown rice flour on gluten network formation, dough properties and bread quality. INNOV FOOD SCI EMERG 2022. [DOI: 10.1016/j.ifset.2022.103217] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/30/2022]
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5
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Tu M, Li Y. Toward the Genetic Basis and Multiple QTLs of Kernel Hardness in Wheat. PLANTS (BASEL, SWITZERLAND) 2020; 9:E1631. [PMID: 33255282 PMCID: PMC7760206 DOI: 10.3390/plants9121631] [Citation(s) in RCA: 12] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Grants] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 09/04/2020] [Revised: 11/21/2020] [Accepted: 11/23/2020] [Indexed: 12/03/2022]
Abstract
Kernel hardness is one of the most important single traits of wheat seed. It classifies wheat cultivars, determines milling quality and affects many end-use qualities. Starch granule surfaces, polar lipids, storage protein matrices and Puroindolines potentially form a four-way interaction that controls wheat kernel hardness. As a genetic factor, Puroindoline polymorphism explains over 60% of the variation in kernel hardness. However, genetic factors other than Puroindolines remain to be exploited. Over the past two decades, efforts using population genetics have been increasing, and numerous kernel hardness-associated quantitative trait loci (QTLs) have been identified on almost every chromosome in wheat. Here, we summarize the state of the art for mapping kernel hardness. We emphasize that these steps in progress have benefitted from (1) the standardized methods for measuring kernel hardness, (2) the use of the appropriate germplasm and mapping population, and (3) the improvements in genotyping methods. Recently, abundant genomic resources have become available in wheat and related Triticeae species, including the high-quality reference genomes and advanced genotyping technologies. Finally, we provide perspectives on future research directions that will enhance our understanding of kernel hardness through the identification of multiple QTLs and will address challenges involved in fine-tuning kernel hardness and, consequently, food properties.
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Affiliation(s)
| | - Yin Li
- Waksman Institute of Microbiology, Rutgers, The State University of New Jersey, 190 Frelinghuysen Road, Piscataway, NJ 08854, USA;
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6
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Kumar A, Mantovani EE, Simsek S, Jain S, Elias EM, Mergoum M. Genome wide genetic dissection of wheat quality and yield related traits and their relationship with grain shape and size traits in an elite × non-adapted bread wheat cross. PLoS One 2019; 14:e0221826. [PMID: 31532783 PMCID: PMC6750600 DOI: 10.1371/journal.pone.0221826] [Citation(s) in RCA: 31] [Impact Index Per Article: 6.2] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2019] [Accepted: 08/15/2019] [Indexed: 12/21/2022] Open
Abstract
The genetic gain in yield and quality are two major targets of wheat breeding programs around the world. In this study, a high density genetic map consisting of 10,172 SNP markers identified a total of 43 genomic regions associated with three quality traits, three yield traits and two agronomic traits in hard red spring wheat (HRSW). When compared with six grain shape and size traits, the quality traits showed mostly independent genetic control (~18% common loci), while the yield traits showed moderate association (~53% common loci). Association of genomic regions for grain area (GA) and thousand-grain weight (TGW), with yield suggests that targeting an increase in GA may help enhancing wheat yield through an increase in TGW. Flour extraction (FE), although has a weak positive phenotypic association with grain shape and size, they do not share any common genetic loci. A major contributor to plant height was the Rht8 locus and the reduced height allele was associated with significant increase in grains per spike (GPS) and FE, and decrease in number of spikes per square meter and test weight. Stable loci were identified for almost all the traits. However, we could not find any QTL in the region of major known genes like GPC-B1, Ha, Rht-1, and Ppd-1. Epistasis also played an important role in the genetics of majority of the traits. In addition to enhancing our knowledge about the association of wheat quality and yield with grain shape and size, this study provides novel loci, genetic information and pre-breeding material (combining positive alleles from both parents) to enhance the cultivated gene pool in wheat germplasm. These resources are valuable in facilitating molecular breeding for wheat quality and yield improvement.
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Affiliation(s)
- Ajay Kumar
- Department of Plant Sciences, North Dakota State University, Fargo, ND, United States of America
| | - Eder E. Mantovani
- Department of Plant Sciences, North Dakota State University, Fargo, ND, United States of America
| | - Senay Simsek
- Department of Plant Sciences, North Dakota State University, Fargo, ND, United States of America
| | - Shalu Jain
- Department of Plant Pathology, North Dakota State University, Fargo, ND, United States of America
| | - Elias M. Elias
- Department of Plant Sciences, North Dakota State University, Fargo, ND, United States of America
| | - Mohamed Mergoum
- Department of Plant Sciences, North Dakota State University, Fargo, ND, United States of America
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Langner M, Krystkowiak K, Salmanowicz BP, Adamski T, Krajewski P, Kaczmarek Z, Surma M. The influence of Glu-1 and Glu-3 loci on dough rheology and bread-making properties in wheat (Triticum aestivum L.) doubled haploid lines. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2017; 97:5083-5091. [PMID: 28429474 DOI: 10.1002/jsfa.8385] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.6] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 12/13/2016] [Revised: 04/12/2017] [Accepted: 04/12/2017] [Indexed: 06/07/2023]
Abstract
BACKGROUND The major determinants of wheat quality are Glu-1 and Glu-3 glutenin loci and environmental factors. Additive effects of alleles at the Glu-1 and Glu-3 loci, as well as their interactions, were evaluated for dough rheology and baking properties in four groups of wheat doubled haploid lines differing in high- and low-molecular-weight glutenin composition. RESULTS Flour quality, Reomixer (Reologica Instruments, Lund, Sweden), dough extension, Farinograph (Brabender GmbH, Duisburg, Germany) and baking parameters were determined. Groups of lines with the alleles Glu-A3b and Glu-B3d were characterized by higher values of dough and baking parameters compared to those with the Glu-A3e and Glu-B3a alleles. Effects of interactions between allelic variants at the Glu-1 and Glu-3 loci on Reomixer parameters, dough extension tests and baking parameters were significant, although additive effects of individual alleles were not always significant. CONCLUSION The allelic variants at Glu-B3 had a much greater effect on dough rheological parameters than the variants at Glu-A3 or Glu-D3 loci. The effect of allelic variations at the Glu-D3 loci on rheological parameters and bread-making quality was non-significant, whereas their interactions with a majority of alleles at the other Glu-1 × Glu-3 loci were significant. © 2017 Society of Chemical Industry.
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Affiliation(s)
- Monika Langner
- Institute of Plant Genetics, Polish Academy of Science, Poznań, Poland
| | | | | | - Tadeusz Adamski
- Institute of Plant Genetics, Polish Academy of Science, Poznań, Poland
| | - Paweł Krajewski
- Institute of Plant Genetics, Polish Academy of Science, Poznań, Poland
| | - Zygmunt Kaczmarek
- Institute of Plant Genetics, Polish Academy of Science, Poznań, Poland
| | - Maria Surma
- Institute of Plant Genetics, Polish Academy of Science, Poznań, Poland
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8
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Pruska-Kędzior A, Makowska A, Kędzior Z, Salmanowicz BP. Rheological characterisation of gluten from triticale (x Triticosecale Wittmack). JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2017; 97:5043-5052. [PMID: 28722133 DOI: 10.1002/jsfa.8555] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 09/30/2016] [Revised: 03/19/2017] [Accepted: 07/13/2017] [Indexed: 06/07/2023]
Abstract
BACKGROUND Triticale gluten still remains very poorly characterised rheologically. In this study the mechanical spectra of gluten isolated from four triticale cultivars were registered and fitted with Cole-Cole functions yielding the visco-elastic plateau parameters. Master spectra were calculated. A retardation test was performed and used to calculate the composite mechanical spectra and the width of visco-elastic plateau l. Protein fractional composition of triticale flour and gluten was studied using capillary zone electrophoresis. RESULTS Differentiated HMW-GS/SS compositions were identified in the triticale cultivars studied. The rheological parameters reached the following values: JN0 1.05·10-3 to 2.69·10-3 Pa-1 , GN0 372 to 956 Pa, ω0 0.003 to 0.06 rad s-1 , l 169 to 3121, Je0 1.57·10-3 to 5.03·10-3 Pa-1 , Ge0 199 to 637 Pa and η0 1.06·107 to 3.93·107 Pa s. CONCLUSIONS Visco-elastic properties of triticale gluten correspond to the lower end of medium visco-elasticity shown by common wheat gluten. Master spectra and the composite mechanical spectra prove that four triticale glutens exhibit practically an identical type of visco-elastic behaviour of a biopolymeric visco-elastic liquid similar to wheat gluten. The visco-elastic plateau parameters GN0 , JN0 , ω0 and l appeared significantly correlated with the contents of prolamins and secaloglutenins in triticale flours and glutens. © 2017 Society of Chemical Industry.
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Affiliation(s)
- Anna Pruska-Kędzior
- Poznan University of Life Sciences, Institute of Food Technology, Poznan, Poland
| | - Agnieszka Makowska
- Poznan University of Life Sciences, Institute of Food Technology, Poznan, Poland
| | - Zenon Kędzior
- Poznan University of Life Sciences, Institute of Food Technology, Poznan, Poland
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Salmanowicz BP, Langner M, Mrugalska B, Ratajczak D, Górny AG. Grain quality characteristics and dough rheological properties in Langdon durum-wild emmer wheat chromosome substitution lines under nitrogen and water deficits. JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE 2017; 97:2030-2041. [PMID: 27558295 DOI: 10.1002/jsfa.8006] [Citation(s) in RCA: 2] [Impact Index Per Article: 0.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Received: 06/23/2016] [Revised: 08/19/2016] [Accepted: 08/23/2016] [Indexed: 06/06/2023]
Abstract
BACKGROUND Wild emmer wheat could serve as a source of novel variation in grain quality and stress resistance for wheat breeding. A set of Triticum durum-T. dicoccoides chromosome substitution lines [LDN(DIC)] and the parental recipient cv. Langdon grown under contrasting water and nitrogen availability in the soil was examined in this study to identify differences in grain quality traits and dough rheological properties. RESULTS Significant genotypic variation was found among the materials for studied traits. This variation was also considerably affected by soil treatments and G × E interactions. The substitutions LDN(DIC-1A) and LDN(DIC-1B) showed separate differentiation in the composition of glutenin sub-units. The results indicated that primarily chromosome DIC-6B is stable source of an enhanced grain protein content and advantageous dough rheological properties. Similar features seem to be shown by the substitutions with the DIC-1A, DIC-2A and DIC-6A, but not under nitrogen shortage, when generally a considerable decrease was noticed in the range of genotypic variation in grain quality. CONCLUSIONS The substitution lines, particularly those with DIC-6B and DIC-6A and to a lesser extent DIC-1A and DIC-2A, were distinguished by advantageous grain quality traits, mixing properties and dough functionality and appear to be the most promising sources of innovative genes for wheat breeding. © 2016 Society of Chemical Industry.
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Affiliation(s)
- Bolesław P Salmanowicz
- Institute of Plant Genetics, Polish Academy of Sciences, 34 Strzeszynska Str., PL, 60-479, Poznan, Poland
| | - Monika Langner
- Institute of Plant Genetics, Polish Academy of Sciences, 34 Strzeszynska Str., PL, 60-479, Poznan, Poland
| | - Beata Mrugalska
- Faculty of Engineering Management, Poznañ University of Technology, 11 Strzelecka Str., PL, 60-965, Poznan, Poland
| | - Dominika Ratajczak
- Institute of Plant Genetics, Polish Academy of Sciences, 34 Strzeszynska Str., PL, 60-479, Poznan, Poland
| | - Andrzej G Górny
- Institute of Plant Genetics, Polish Academy of Sciences, 34 Strzeszynska Str., PL, 60-479, Poznan, Poland
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Yu X, Chen X, Wang L, Yang Y, Zhu X, Shao S, Cui W, Xiong F. Novel insights into the effect of nitrogen on storage protein biosynthesis and protein body development in wheat caryopsis. JOURNAL OF EXPERIMENTAL BOTANY 2017; 68:2259-2274. [PMID: 28472326 DOI: 10.1093/jxb/erx108] [Citation(s) in RCA: 23] [Impact Index Per Article: 3.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Subscribe] [Scholar Register] [Indexed: 05/08/2023]
Abstract
Molecular and cytological mechanisms concerning the effects of nitrogen on wheat (Triticum aestivum L.) storage protein biosynthesis and protein body development remain largely elusive. We used transcriptome sequencing, proteomics techniques, and light microscopy to investigate these issues. In total, 2585 differentially expressed genes (DEGs) and 57 differentially expressed proteins (DEPs) were found 7 days after anthesis (DAA), and 2456 DEGs and 64 DEPs were detected 18 DAA after nitrogen treatment. Gene ontology terms related to protein biosynthesis processes enriched these numbers by 678 and 582 DEGs at 7 and 18 DAA, respectively. Further, 25 Kyoto Encyclopedia of Genes and Genomes pathways were involved in protein biosynthesis at both 7 and 18 DAA. DEPs related to storage protein biosynthesis contained gliadin and glutenin subunits, most of which were up-regulated after nitrogen treatment. Quantitative real-time PCR analysis indicated that some gliadin and glutenin subunit encoding genes were differentially expressed at 18 DAA. Structural observation revealed that wheat endosperm accumulated more and larger protein bodies after nitrogen treatment. Collectively, our findings suggest that nitrogen treatment enhances storage protein content, endosperm protein body quantity, and partial processing quality by altering the expression levels of certain genes involved in protein biosynthesis pathways and storage protein expression at the proteomics level.
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Affiliation(s)
- Xurun Yu
- Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops/Joint International Research Laboratory of Agriculture & Agri-Product Safety, Yangzhou University, Yangzhou 225009, China
| | - Xinyu Chen
- Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops/Joint International Research Laboratory of Agriculture & Agri-Product Safety, Yangzhou University, Yangzhou 225009, China
| | - Leilei Wang
- Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops/Joint International Research Laboratory of Agriculture & Agri-Product Safety, Yangzhou University, Yangzhou 225009, China
| | - Yang Yang
- Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops/Joint International Research Laboratory of Agriculture & Agri-Product Safety, Yangzhou University, Yangzhou 225009, China
| | - Xiaowei Zhu
- Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops/Joint International Research Laboratory of Agriculture & Agri-Product Safety, Yangzhou University, Yangzhou 225009, China
| | - Shanshan Shao
- Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops/Joint International Research Laboratory of Agriculture & Agri-Product Safety, Yangzhou University, Yangzhou 225009, China
| | - Wenxue Cui
- Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops/Joint International Research Laboratory of Agriculture & Agri-Product Safety, Yangzhou University, Yangzhou 225009, China
| | - Fei Xiong
- Jiangsu Key Laboratory of Crop Genetics and Physiology/Co-Innovation Center for Modern Production Technology of Grain Crops/Joint International Research Laboratory of Agriculture & Agri-Product Safety, Yangzhou University, Yangzhou 225009, China
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Krystkowiak K, Langner M, Adamski T, Salmanowicz BP, Kaczmarek Z, Krajewski P, Surma M. Interactions between Glu-1 and Glu-3 loci and associations of selected molecular markers with quality traits in winter wheat (Triticum aestivum L.) DH lines. J Appl Genet 2017; 58:37-48. [PMID: 27502940 PMCID: PMC5243893 DOI: 10.1007/s13353-016-0362-5] [Citation(s) in RCA: 9] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/23/2016] [Revised: 07/10/2016] [Accepted: 07/13/2016] [Indexed: 11/04/2022]
Abstract
The quality of wheat depends on a large complex of genes and environmental factors. The objective of this study was to identify quantitative trait loci controlling technological quality traits and their stability across environments, and to assess the impact of interaction between alleles at loci Glu-1 and Glu-3 on grain quality. DH lines were evaluated in field experiments over a period of 4 years, and genotyped using simple sequence repeat markers. Lines were analysed for grain yield (GY), thousand grain weight (TGW), protein content (PC), starch content (SC), wet gluten content (WG), Zeleny sedimentation value (ZS), alveograph parameter W (APW), hectolitre weight (HW), and grain hardness (GH). A number of QTLs for these traits were identified in all chromosome groups. The Glu-D1 locus influenced TGW, PC, SC, WG, ZS, APW, GH, while locus Glu-B1 affected only PC, ZS, and WG. Most important marker-trait associations were found on chromosomes 1D and 5D. Significant effects of interaction between Glu-1 and Glu-3 loci on technological properties were recorded, and in all types of this interaction positive effects of Glu-D1 locus on grain quality were observed, whereas effects of Glu-B1 locus depended on alleles at Glu-3 loci. Effects of Glu-A3 and Glu-D3 loci per se were not significant, while their interaction with alleles present at other loci encoding HMW and LMW were important. These results indicate that selection of wheat genotypes with predicted good bread-making properties should be based on the allelic composition both in Glu-1 and Glu-3 loci, and confirm the predominant effect of Glu-D1d allele on technological properties of wheat grains.
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Affiliation(s)
- Karolina Krystkowiak
- Institute of Plant Genetics, Polish Academy of Sciences, Strzeszyńska 34, 60-479, Poznań, Poland.
| | - Monika Langner
- Institute of Plant Genetics, Polish Academy of Sciences, Strzeszyńska 34, 60-479, Poznań, Poland.
| | - Tadeusz Adamski
- Institute of Plant Genetics, Polish Academy of Sciences, Strzeszyńska 34, 60-479, Poznań, Poland
| | - Bolesław P Salmanowicz
- Institute of Plant Genetics, Polish Academy of Sciences, Strzeszyńska 34, 60-479, Poznań, Poland
| | - Zygmunt Kaczmarek
- Institute of Plant Genetics, Polish Academy of Sciences, Strzeszyńska 34, 60-479, Poznań, Poland
| | - Paweł Krajewski
- Institute of Plant Genetics, Polish Academy of Sciences, Strzeszyńska 34, 60-479, Poznań, Poland
| | - Maria Surma
- Institute of Plant Genetics, Polish Academy of Sciences, Strzeszyńska 34, 60-479, Poznań, Poland
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12
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Analysis of correlations between contents of protein fractions in wheat endosperm models and their mechanical resistance. J Cereal Sci 2016. [DOI: 10.1016/j.jcs.2016.07.009] [Citation(s) in RCA: 7] [Impact Index Per Article: 0.9] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/20/2022]
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13
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Segregation distortion in homozygous lines obtained via anther culture and maize doubled haploid methods in comparison to single seed descent in wheat (Triticum aestivum L.). ELECTRON J BIOTECHN 2014. [DOI: 10.1016/j.ejbt.2013.12.002] [Citation(s) in RCA: 18] [Impact Index Per Article: 1.8] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/16/2022] Open
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14
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Molecular, physicochemical and rheological characteristics of introgressive Triticale/Triticum monococcum ssp. monococcum lines with wheat 1D/1A chromosome substitution. Int J Mol Sci 2013; 14:15595-614. [PMID: 23896593 PMCID: PMC3759875 DOI: 10.3390/ijms140815595] [Citation(s) in RCA: 5] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/28/2013] [Revised: 06/27/2013] [Accepted: 07/15/2013] [Indexed: 11/17/2022] Open
Abstract
Three sets of hexaploid introgressive triticale lines, with Triticum monococcum ssp. monococcum (cultivated einkorn wheat) genes and a bread wheat chromosome 1D substituted for chromosome 1A, and one set of secondary triticale lines were evaluated for grain and flour physicochemical and dough rheological characteristics in two generations (F7 and F8). Genomic in situ hybridization (GISH) and fluorescence in situ hybridization (FISH) confirmed the 1D/1A chromosome substitution. The presence or absence of einkorn high-molecular-weight (HMW) glutenin subunits and the wheat Glu-D1d locus encoding the 5 + 10 subunits was assessed by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE), capillary zone electrophoresis, and allele-specific molecular markers. Significant differences were found among physicochemical properties (with the exception of the Hagberg falling number) of all introgressive Triticale/T. monococcum lines and the secondary triticale lines. The wheat 1D/1A chromosome substitution also affected these properties. The results showed that in all introgressive triticale lines, the protein and gluten content, Zeleny sedimentation value, and water absorption capacity, were increased. The rheological parameters estimated using micro-farinograph, reomixer, and Kieffer dough extensibility systems also showed an appreciable increase in dough-mixing properties, maximum resistance to extension (Rmax), and dough extensibility. Introgressive Triticale/T. monococcum lines with 5 + 10 subunits have particularly favorable rheological parameters. The results obtained in this study suggest that the cultivated einkorn genome Am, in the context of hexaploid secondary triticale lines and with a wheat 1D/1A substitution, has the potential to improve gluten polymer interactions and be a valuable genetic resource for triticale quality improvement.
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15
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Hussain A, Larsson H, Kuktaite R, Prieto-Linde ML, Johansson E. Amount and Size Distribution of Monomeric and Polymeric Proteins in the Grain of Organically Produced Wheat. Cereal Chem 2013. [DOI: 10.1094/cchem-05-12-0064-r] [Citation(s) in RCA: 6] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/03/2022]
Affiliation(s)
- Abrar Hussain
- Department of Biosciences, COMSATS Institute of Information Technology Sahiwal Campus, Sahiwal, Pakistan
- Corresponding author. Phone: +92-3315141798. Fax: +92-404305006. E-mail: ,
| | - Hans Larsson
- The Swedish University of Agricultural Sciences, Department of Agrosystems, Faculty of Landscape Planning, Horticulture and Agriculture Science, Alnarp, Sweden
| | - Ramune Kuktaite
- The Swedish University of Agricultural Sciences, Department of Agrosystems, Faculty of Landscape Planning, Horticulture and Agriculture Science, Alnarp, Sweden
| | - Maria Luisa Prieto-Linde
- The Swedish University of Agricultural Sciences, Department of Agrosystems, Faculty of Landscape Planning, Horticulture and Agriculture Science, Alnarp, Sweden
| | - Eva Johansson
- The Swedish University of Agricultural Sciences, Department of Agrosystems, Faculty of Landscape Planning, Horticulture and Agriculture Science, Alnarp, Sweden
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