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Sheldon RA. Waste Valorization in a Sustainable Bio-Based Economy: The Road to Carbon Neutrality. Chemistry 2024:e202402207. [PMID: 39240026 DOI: 10.1002/chem.202402207] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/07/2024] [Indexed: 09/07/2024]
Abstract
The development of sustainable chemistry underlying the quest to minimize and/or valorize waste in the carbon-neutral manufacture of chemicals is followed over the last four to five decades. Both chemo- and biocatalysis have played an indispensable role in this odyssey. in particular developments in protein engineering, metagenomics and bioinformatics over the preceding three decades have played a crucial supporting role in facilitating the widespread application of both whole cell and cell-free biocatalysis. The pressing need, driven by climate change mitigation, for a drastic reduction in greenhouse gas (GHG) emissions, has precipitated an energy transition based on decarbonization of energy and defossilization of organic chemicals production. The latter involves waste biomass and/or waste CO2 as the feedstock and green electricity generated using solar, wind, hydroelectric or nuclear energy. The use of waste polysaccharides as feedstocks will underpin a renaissance in carbohydrate chemistry with pentoses and hexoses as base chemicals and bio-based solvents and polymers as environmentally friendly downstream products. The widespread availability of inexpensive electricity and solar energy has led to increasing attention for electro(bio)catalysis and photo(bio)catalysis which in turn is leading to myriad innovations in these fields.
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Affiliation(s)
- Roger A Sheldon
- Department of Biotechnology, Delft University of Technology, Netherlands
- Department of Chemistry, University of the Witwatersrand, Johannesburg, South Africa
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Baby EK, Savitha R, Kinsella GK, Nolan K, Ryan BJ, Henehan GT. Influence of deep eutectic solvents on redox biocatalysis involving alcohol dehydrogenases. Heliyon 2024; 10:e32550. [PMID: 38948051 PMCID: PMC11209023 DOI: 10.1016/j.heliyon.2024.e32550] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/23/2024] [Revised: 05/30/2024] [Accepted: 06/05/2024] [Indexed: 07/02/2024] Open
Abstract
Redox biocatalysis plays an increasingly important role in modern organic synthesis. The recent integration of novel media such as deep eutectic solvents (DESs) has significantly impacted this field of chemical biology. Alcohol dehydrogenases (ADHs) are important biocatalysts where their unique specificity is used for enantioselective synthesis. This review explores aspects of redox biocatalysis in the presence of DES both with whole cells and with isolated ADHs. In both cases, the presence of DES has a significant influence on the outcome of reactions albeit via different mechanisms. For whole cells, DES was shown to be a useful tool to direct product formation or configuration - a process of solvent engineering. Whole cells can tolerate DES as media components for the solubilization of hydrophobic substrates. In some cases, DES in the growth medium altered the enantioselectivity of whole cell transformations by solvent control. For isolated enzymes, on the other hand, the presence of DES promotes substrate solubility as well as enhancing enzyme stability and activity. DES can be employed as a smart solvent or smart cosubstrate particularly for cofactor regeneration purposes. From the literatures examined, it is suggested that DES based on choline chloride (ChCl) such as ChCl:Glycerol (Gly), ChCl:Glucose (Glu), and ChCl:1,4-butanediol (1,4-BD) are useful starting points for ADH-based redox biocatalysis. However, each specific reaction will require optimisation due to the influence of several factors on biocatalysis in DES. These include solvent composition, enzyme source, temperature, pH and ionic strength as well as the substrates and products under investigation.
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Affiliation(s)
- Ebin K. Baby
- School of Food Science and Environmental Health, Technological University Dublin, Grangegorman Lower, Dublin 7, D07 E244, Ireland
| | - Rangasamy Savitha
- School of Food Science and Environmental Health, Technological University Dublin, Grangegorman Lower, Dublin 7, D07 E244, Ireland
| | - Gemma K. Kinsella
- School of Food Science and Environmental Health, Technological University Dublin, Grangegorman Lower, Dublin 7, D07 E244, Ireland
| | - Kieran Nolan
- School of Chemical Sciences, Dublin City University, Glasnevin, Dublin 9, D09 V209, Ireland
| | - Barry J. Ryan
- School of Food Science and Environmental Health, Technological University Dublin, Grangegorman Lower, Dublin 7, D07 E244, Ireland
| | - Gary T.M. Henehan
- School of Food Science and Environmental Health, Technological University Dublin, Grangegorman Lower, Dublin 7, D07 E244, Ireland
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Chadha A, Padhi SK, Stella S, Venkataraman S, Saravanan T. Microbial alcohol dehydrogenases: recent developments and applications in asymmetric synthesis. Org Biomol Chem 2024; 22:228-251. [PMID: 38050738 DOI: 10.1039/d3ob01447a] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [MESH Headings] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/06/2023]
Abstract
Alcohol dehydrogenases are a well-known group of enzymes in the class of oxidoreductases that use electron transfer cofactors such as NAD(P)+/NAD(P)H for oxidation or reduction reactions of alcohols or carbonyl compounds respectively. These enzymes are utilized mainly as purified enzymes and offer some advantages in terms of green chemistry. They are environmentally friendly and a sustainable alternative to traditional chemical synthesis of bulk and fine chemicals. Industry has implemented several whole-cell biocatalytic processes to synthesize pharmaceutically active ingredients by exploring the high selectivity of enzymes. Unlike the whole cell system where cofactor regeneration is well conserved within the cellular environment, purified enzymes require additional cofactors or a cofactor recycling system in the reaction, even though cleaner reactions can be carried out with fewer downstream work-up problems. The challenge of producing purified enzymes in large quantities has been solved in large part by the use of recombinant enzymes. Most importantly, recombinant enzymes find applications in many cascade biotransformations to produce several important chiral precursors. Inevitably, several dehydrogenases were engineered as mere recombinant enzymes could not meet the industrial requirements for substrate and stereoselectivity. In recent years, a significant number of engineered alcohol dehydrogenases have been employed in asymmetric synthesis in industry. In a parallel development, several enzymatic and non-enzymatic methods have been established for regenerating expensive cofactors (NAD+/NADP+) to make the overall enzymatic process more efficient and economically viable. In this review article, recent developments and applications of microbial alcohol dehydrogenases are summarized by emphasizing notable examples.
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Affiliation(s)
- Anju Chadha
- Department of Biotechnology, Indian Institute of Technology Madras, Chennai, 600 036, Tamil Nadu, India.
| | - Santosh Kumar Padhi
- Biocatalysis and Enzyme Engineering Laboratory, Department of Biochemistry, School of Life Sciences, University of Hyderabad, Hyderabad 500 046, Telangana, India.
| | - Selvaraj Stella
- Department of Chemistry, Sarah Tucker College (Affiliated to Manonmaniam Sundaranar University), Tirunelveli-627007, Tamil Nadu, India.
| | - Sowmyalakshmi Venkataraman
- Department of Pharmaceutical Chemistry, Sri Ramachandra Faculty of Pharmacy, Sri Ramachandra Institute of Higher Education & Research, Chennai, 600116, Tamil Nadu, India.
| | - Thangavelu Saravanan
- School of Chemistry, University of Hyderabad, Hyderabad 500 046, Telangana, India.
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Miele M, Pillari V, Pace V, Alcántara AR, de Gonzalo G. Application of Biobased Solvents in Asymmetric Catalysis. Molecules 2022; 27:molecules27196701. [PMID: 36235236 PMCID: PMC9570574 DOI: 10.3390/molecules27196701] [Citation(s) in RCA: 4] [Impact Index Per Article: 2.0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 09/15/2022] [Revised: 09/30/2022] [Accepted: 10/04/2022] [Indexed: 11/16/2022] Open
Abstract
The necessity of more sustainable conditions that follow the twelve principles of Green Chemistry have pushed researchers to the development of novel reagents, catalysts and solvents for greener asymmetric methodologies. Solvents are in general a fundamental part for developing organic processes, as well as for the separation and purification of the reaction products. By this reason, in the last years, the application of the so-called green solvents has emerged as a useful alternative to the classical organic solvents. These solvents must present some properties, such as a low vapor pressure and toxicity, high boiling point and biodegradability, and must be obtained from renewable sources. In the present revision, the recent application of these biobased solvents in the synthesis of optically active compounds employing different catalytic methodologies, including biocatalysis, organocatalysis and metal catalysis, will be analyzed to provide a novel tool for carrying out more ecofriendly organic processes.
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Affiliation(s)
- Margherita Miele
- Department of Chemistry, University of Torino, Via Giuria 7, 10125 Torino, Italy
| | - Veronica Pillari
- Department of Pharmaceutical Sciences, University of Vienna, Josef-Holaubek Platz 2, 1090 Vienna, Austria
| | - Vittorio Pace
- Department of Chemistry, University of Torino, Via Giuria 7, 10125 Torino, Italy
- Department of Pharmaceutical Sciences, University of Vienna, Josef-Holaubek Platz 2, 1090 Vienna, Austria
- Correspondence: (V.P.); (A.R.A.); (G.d.G.); Tel.: +39-011-6707934 (V.P.); +34-913941821 (A.R.A.); +34-955420802 (G.d.G.)
| | - Andrés R. Alcántara
- Department of Chemistry in Pharmaceutical Sciences, Faculty of Pharmacy, Complutense University of Madrid, Plaza de Ramón y Cajal s/n, 28040 Madrid, Spain
- Correspondence: (V.P.); (A.R.A.); (G.d.G.); Tel.: +39-011-6707934 (V.P.); +34-913941821 (A.R.A.); +34-955420802 (G.d.G.)
| | - Gonzalo de Gonzalo
- Department of Organic Chemistry, University of Seville, c/ Profesor García González 1, 41014 Seville, Spain
- Correspondence: (V.P.); (A.R.A.); (G.d.G.); Tel.: +39-011-6707934 (V.P.); +34-913941821 (A.R.A.); +34-955420802 (G.d.G.)
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de Gonzalo G, Alcántara AR, Domínguez de María P, Sánchez-Montero JM. Biocatalysis for the asymmetric synthesis of Active Pharmaceutical Ingredients (APIs): this time is for real. Expert Opin Drug Discov 2022; 17:1159-1171. [PMID: 36045591 DOI: 10.1080/17460441.2022.2114453] [Citation(s) in RCA: 2] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/29/2022]
Abstract
INTRODUCTION Biocatalysis has emerged as a powerful and useful strategy for the synthesis of active pharmaceutical ingredients (APIs). The outstanding developments in molecular biology techniques allow nowadays the screening, large-scale production, and designing of biocatalysts, adapting them to desired reactions. Many enzymes can perform reactions both in aqueous and non-aqueous media, broadening even further the opportunities to integrate them in complex pharmaceutical multi-step syntheses. AREAS COVERED This paper showcases several examples of biocatalysis in the pharmaceutical industry, covering examples of different enzymes, such as lipases, oxidoreductases, and transaminases, to deliver active drugs through complex synthetic routes. Examples are critically discussed in terms of reaction conditions, motivation for using an enzyme, and how biocatalysts can be integrated in multi-step syntheses. When possible, biocatalytic routes are benchmarked with chemical reactions. EXPERT OPINION The reported enzymatic examples are performed with high substrate loadings (>100 g L-1) and with excellent selectivity, making them inspiring strategies for present and future industrial applications. The combination of powerful molecular biology techniques with the needs of the pharmaceutical industry can be aligned, creating promising platforms for synthesis under more sustainable conditions.
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Affiliation(s)
- Gonzalo de Gonzalo
- Departamento de Química Orgánica, Universidad de Sevilla, Sevilla, Spain
| | - Andrés R Alcántara
- Departamento de Química en Ciencias Farmacéuticas, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain
| | | | - José María Sánchez-Montero
- Departamento de Química en Ciencias Farmacéuticas, Facultad de Farmacia, Universidad Complutense de Madrid, Madrid, Spain
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de Gonzalo G, Lončar N, Fraaije M. Kinetic resolution of racemic benzofused alcohols catalysed by HMFO variants in presence of natural deep eutectic solvents. BIOCATAL BIOTRANSFOR 2022. [DOI: 10.1080/10242422.2022.2038582] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 11/02/2022]
Affiliation(s)
- Gonzalo de Gonzalo
- Departamento de Química Orgánica, Universidad de Sevilla, Sevilla, Spain
| | | | - Marco Fraaije
- Groningen Biomolecular Sciences and Biotechnology Institute, University of Groningen, Groningen, The Netherlands
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25th Anniversary of Molecules-Recent Advances in Green Chemistry. Molecules 2021; 26:molecules26123768. [PMID: 34205633 PMCID: PMC8235150 DOI: 10.3390/molecules26123768] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Download PDF] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2021] [Accepted: 06/16/2021] [Indexed: 11/25/2022] Open
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Mannu A, Blangetti M, Baldino S, Prandi C. Promising Technological and Industrial Applications of Deep Eutectic Systems. MATERIALS (BASEL, SWITZERLAND) 2021; 14:2494. [PMID: 34065921 PMCID: PMC8151193 DOI: 10.3390/ma14102494] [Citation(s) in RCA: 18] [Impact Index Per Article: 6.0] [Reference Citation Analysis] [Abstract] [Key Words] [Track Full Text] [Download PDF] [Figures] [Subscribe] [Scholar Register] [Received: 03/29/2021] [Revised: 05/07/2021] [Accepted: 05/10/2021] [Indexed: 12/13/2022]
Abstract
Deep Eutectic Systems (DESs) are obtained by combining Hydrogen Bond Acceptors (HBAs) and Hydrogen Bond Donors (HBDs) in specific molar ratios. Since their first appearance in the literature in 2003, they have shown a wide range of applications, ranging from the selective extraction of biomass or metals to medicine, as well as from pollution control systems to catalytic active solvents and co-solvents. The very peculiar physical properties of DESs, such as the elevated density and viscosity, reduced conductivity, improved solvent ability and a peculiar optical behavior, can be exploited for engineering modular systems which cannot be obtained with other non-eutectic mixtures. In the present review, selected DESs research fields, as their use in materials synthesis, as solvents for volatile organic compounds, as ingredients in pharmaceutical formulations and as active solvents and cosolvents in organic synthesis, are reported and discussed in terms of application and future perspectives.
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Affiliation(s)
- Alberto Mannu
- Department of Chemistry, University of Turin, Via Pietro Giuria 7, I-10125 Turin, Italy; (M.B.); (S.B.)
| | | | | | - Cristina Prandi
- Department of Chemistry, University of Turin, Via Pietro Giuria 7, I-10125 Turin, Italy; (M.B.); (S.B.)
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Zhang Y, Eser BE, Guo Z. A Bi-Enzymatic Cascade Pathway towards Optically Pure FAHFAs*. Chembiochem 2021; 22:2146-2153. [PMID: 33792147 DOI: 10.1002/cbic.202100070] [Citation(s) in RCA: 9] [Impact Index Per Article: 3.0] [Reference Citation Analysis] [Abstract] [Key Words] [Journal Information] [Subscribe] [Scholar Register] [Received: 02/16/2021] [Revised: 03/31/2021] [Indexed: 01/28/2023]
Abstract
Recently discovered endogenous mammalian lipids, fatty acid esters of hydroxy fatty acids (FAHFAs), have been proved to have anti-inflammatory and anti-diabetic effects. Due to their extremely low abundancies in vivo, forging a feasible scenario for FAHFA synthesis is critical for their use in uncovering biological mechanisms or in clinical trials. Here, we showcase a fully enzymatic approach, a novel in vitro bi-enzymatic cascade system, enabling an effective conversion of nature-abundant fatty acids into FAHFAs. Two hydratases from Lactobacillus acidophilus were used for converting unsaturated fatty acids to various enantiomeric hydroxy fatty acids, followed by esterification with another fatty acid catalyzed by Candida antarctica lipase A (CALA). Various FAHFAs were synthesized in a semi-preparative scale using this bi-enzymatic approach in a one-pot two-step operation mode. In all, we demonstrate that the hydratase-CALA system offers a promising route for the synthesis of optically pure structure-diverse FAHFAs.
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Affiliation(s)
- Yan Zhang
- Department of Biological and Chemical Engineering, Aarhus University, Gustav Wieds Vej 10, 8000, Aarhus, Denmark
| | - Bekir Engin Eser
- Department of Biological and Chemical Engineering, Aarhus University, Gustav Wieds Vej 10, 8000, Aarhus, Denmark
| | - Zheng Guo
- Department of Biological and Chemical Engineering, Aarhus University, Gustav Wieds Vej 10, 8000, Aarhus, Denmark
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Fanjul-Mosteirín N, del Amo V. Organocatalytic transformations in deep eutectic solvents: Green methodologies made greener. Tetrahedron 2021. [DOI: 10.1016/j.tet.2021.131967] [Citation(s) in RCA: 3] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/21/2022]
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Solvent role in the lipase-catalysed esterification of cinnamic acid and derivatives. Optimisation of the biotransformation conditions. Tetrahedron 2021. [DOI: 10.1016/j.tet.2020.131873] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/15/2022]
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