Reference Citation Analysis: Find an Article, Find a Category, Find a Journal, Find a Scholar

For: Ibrahim B, Arkhipova K, Andeweg AC, Posada-Céspedes S, Enault F, Gruber A, Koonin EV, Kupczok A, Lemey P, McHardy AC, McMahon DP, Pickett BE, Robertson DL, Scheuermann RH, Zhernakova A, Zwart MP, Schönhuth A, Dutilh BE, Marz M. Bioinformatics Meets Virology: The European Virus Bioinformatics Center's Second Annual Meeting. Viruses 2018;10:E256. [PMID: 29757994 PMCID: PMC5977249 DOI: 10.3390/v10050256] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2018] [Revised: 05/11/2018] [Accepted: 05/11/2018] [Indexed: 11/16/2022] Open

For:	Ibrahim B, Arkhipova K, Andeweg AC, Posada-Céspedes S, Enault F, Gruber A, Koonin EV, Kupczok A, Lemey P, McHardy AC, McMahon DP, Pickett BE, Robertson DL, Scheuermann RH, Zhernakova A, Zwart MP, Schönhuth A, Dutilh BE, Marz M. Bioinformatics Meets Virology: The European Virus Bioinformatics Center's Second Annual Meeting. Viruses 2018;10:E256. [PMID: 29757994 PMCID: PMC5977249 DOI: 10.3390/v10050256] [Citation(s) in RCA: 6] [Impact Index Per Article: 1.0] [Reference Citation Analysis] [What about the content of this article? (0)] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 05/09/2018] [Revised: 05/11/2018] [Accepted: 05/11/2018] [Indexed: 11/16/2022] Open

Number

Cited by Other Article(s)

Hufsky F, Abecasis A, Agudelo-Romero P, Bletsa M, Brown K, Claus C, Deinhardt-Emmer S, Deng L, Friedel CC, Gismondi MI, Kostaki EG, Kühnert D, Kulkarni-Kale U, Metzner KJ, Meyer IM, Miozzi L, Nishimura L, Paraskevopoulou S, Pérez-Cataluña A, Rahlff J, Thomson E, Tumescheit C, van der Hoek L, Van Espen L, Vandamme AM, Zaheri M, Zuckerman N, Marz M. Women in the European Virus Bioinformatics Center. Viruses 2022;14:1522. [PMID: 35891501 PMCID: PMC9319252 DOI: 10.3390/v14071522] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 06/16/2022] [Revised: 07/05/2022] [Accepted: 07/07/2022] [Indexed: 02/01/2023] Open

Affiliation(s)

Franziska Hufsky European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, 07743 Jena, Germany
Ana Abecasis European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Global Health and Tropical Medicine, Institute of Hygiene and Tropical Medicine, New University of Lisbon, 1349-008 Lisbon, Portugal
Patricia Agudelo-Romero European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Wal-Yan Respiratory Research Centre, Telethon Kids Institute, University of Western Australia, Nedlands, WA 6009, Australia
Magda Bletsa European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Department of Hygiene, Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, 115 27 Athens, Greece Department of Microbiology, Immunology and Transplantation, Rega Institute, Katholieke Universiteit Leuven, B-3000 Leuven, Belgium
Katherine Brown European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Division of Virology, Department of Pathology, University of Cambridge, Cambridge CB2 1TN, UK
Claudia Claus European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Institute of Medical Microbiology and Virology, Medical Faculty, Leipzig University, 04103 Leipzig, Germany
Stefanie Deinhardt-Emmer European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Institute of Medical Microbiology, Jena University Hospital, 07747 Jena, Germany
Li Deng European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Institute of Virology, Helmholtz Centre Munich-German Research Center for Environmental Health, 85764 Neuherberg, Germany Microbial Disease Prevention, School of Life Sciences, Technical University of Munich, 85354 Freising, Germany
Caroline C. Friedel European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Institute of Informatics, Ludwig-Maximilians-Universität München, 80333 Munich, Germany
María Inés Gismondi European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Institute of Agrobiotechnology and Molecular Biology (IABIMO), National Institute for Agriculture Technology (INTA), National Research Council (CONICET), Hurlingham B1686IGC, Argentina Department of Basic Sciences, National University of Luján, Luján B6702MZP, Argentina
Evangelia Georgia Kostaki European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Department of Hygiene, Epidemiology and Medical Statistics, Medical School, National and Kapodistrian University of Athens, 115 27 Athens, Greece
Denise Kühnert European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Transmission, Infection, Diversification and Evolution Group, Max Planck Institute for the Science of Human History, 07745 Jena, Germany
Urmila Kulkarni-Kale European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Bioinformatics Centre, Savitribai Phule Pune University, Pune 411007, India
Karin J. Metzner European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Department of Infectious Diseases and Hospital Epidemiology, University Hospital Zurich, 8091 Zurich, Switzerland Institute of Medical Virology, University of Zurich, 8057 Zurich, Switzerland
Irmtraud M. Meyer European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Berlin Institute for Medical Systems Biology, Max Delbrück Center for Molecular Medicine in the Helmholtz Association, 10115 Berlin, Germany Institute of Chemistry and Biochemistry, Department of Biology, Chemistry and Pharmacy, Freie Universität Berlin, 14195 Berlin, Germany Faculty of Mathematics and Computer Science, Freie Universität Berlin, 14195 Berlin, Germany
Laura Miozzi European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Institute for Sustainable Plant Protection, National Research Council of Italy, 10135 Torino, Italy
Luca Nishimura European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Department of Genetics, School of Life Science, The Graduate University for Advanced Studies (SOKENDAI), Mishima 411-8540, Japan Human Genetics Laboratory, National Institute of Genetics, Mishima 411-8540, Japan
Sofia Paraskevopoulou European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Methods Development and Research Infrastructure, Bioinformatics and Systems Biology, Robert Koch Institute, 13353 Berlin, Germany
Alba Pérez-Cataluña European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) VISAFELab, Department of Preservation and Food Safety Technologies, Institute of Agrochemistry and Food Technology, IATA-CSIC, 46980 Valencia, Spain
Janina Rahlff European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Centre for Ecology and Evolution in Microbial Model Systems (EEMiS), Department of Biology and Environmental Science, Linneaus University, 391 82 Kalmar, Sweden
Emma Thomson European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Queen Elizabeth University Hospital, NHS Greater Glasgow and Clyde, Glasgow G51 4TF, UK MRC-University of Glasgow Centre for Virus Research, Glasgow G61 1QH, UK
Charlotte Tumescheit European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) School of Biological Sciences, Seoul National University, Seoul 08826, Korea
Lia van der Hoek European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Laboratory of Experimental Virology, Department of Medical Microbiology and Infection Prevention, Amsterdam UMC, University of Amsterdam, 1012 WX Amsterdam, The Netherlands Amsterdam Institute for Infection and Immunity, 1100 DD Amsterdam, The Netherlands
Lore Van Espen European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Department of Microbiology, Immunology and Transplantation, Rega Institute, Katholieke Universiteit Leuven, B-3000 Leuven, Belgium
Anne-Mieke Vandamme European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Department of Microbiology, Immunology and Transplantation, Rega Institute, Katholieke Universiteit Leuven, B-3000 Leuven, Belgium Global Health and Tropical Medicine, Instituto de Higiene e Medicina Tropical, Universidade Nova de Lisboa, 1349-008 Lisbon, Portugal Institute for the Future, Katholieke Universiteit Leuven, B-3000 Leuven, Belgium
Maryam Zaheri European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Institute of Medical Virology, University of Zurich, 8057 Zurich, Switzerland
Neta Zuckerman European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) Central Virology Laboratory, Public Health Services, Ministry of Health and Sheba Medical Center, Ramat Gan 52621, Israel
Manja Marz European Virus Bioinformatics Center, 07743 Jena, Germany; (A.A.); (P.A.-R.); (M.B.); (K.B.); (C.C.); (S.D.-E.); (L.D.); (C.C.F.); (M.I.G.); (E.G.K.); (D.K.); (U.K.-K.); (K.J.M.); (I.M.M.); (L.M.); (L.N.); (S.P.); (A.P.-C.); (J.R.); (E.T.); (C.T.); (L.v.d.H.); (L.V.E.); (A.-M.V.); (M.Z.); (N.Z.) RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, 07743 Jena, Germany

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p38 activation and viral infection. Expert Rev Mol Med 2022;24:e4. [DOI: 10.1017/erm.2021.29] [Citation(s) in RCA: 1] [Impact Index Per Article: 0.5] [Reference Citation Analysis] [Abstract] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] [Indexed: 12/11/2022]

Goettsch W, Beerenwinkel N, Deng L, Dölken L, Dutilh BE, Erhard F, Kaderali L, von Kleist M, Marquet R, Matthijnssens J, McCallin S, McMahon D, Rattei T, Van Rij RP, Robertson DL, Schwemmle M, Stern-Ginossar N, Marz M. ITN-VIROINF: Understanding (Harmful) Virus-Host Interactions by Linking Virology and Bioinformatics. Viruses 2021;13:v13050766. [PMID: 33925452 PMCID: PMC8145447 DOI: 10.3390/v13050766] [Citation(s) in RCA: 4] [Impact Index Per Article: 1.3] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 03/05/2021] [Revised: 04/15/2021] [Accepted: 04/22/2021] [Indexed: 11/16/2022] Open

Affiliation(s)

Winfried Goettsch RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University, 07743 Jena, Germany;
Niko Beerenwinkel Department of Biosystems Science and Engineering, ETH Zurich, Mattenstrasse 26, 4058 Basel, Switzerland;
Li Deng Institute of Virology, Helmholtz Centre Munich and Technical University Munich, Ingolstädter Landstraße 1, 85764 Neuherberg, Germany;
Lars Dölken Institut für Virologie und Immunbiologie, Julius-Maximilians-Universität Würzburg, 97078 Würzburg, Germany; (L.D.); (F.E.)
Bas E. Dutilh Theoretical Biology and Bioinformatics, Science for Life, Utrecht University, Hugo R. Kruytgebouw, Padualaan 8, 3584 CH Utrecht, The Netherlands;
Florian Erhard Institut für Virologie und Immunbiologie, Julius-Maximilians-Universität Würzburg, 97078 Würzburg, Germany; (L.D.); (F.E.)
Lars Kaderali Institute of Bioinformatics, University Medicine Greifswald, 17475 Greifswald, Germany;
Max von Kleist MF1 Bioinformatics, Robert Koch-Institute, 13353 Berlin, Germany;
Roland Marquet CNRS, Architecture et Réactivité de l’ARN, Université de Strasbourg, UPR 9002 Strasbourg, France;
Jelle Matthijnssens Department of Microbiology and Immunology, Katholieke Universiteit Leuven, Herestraat 49 Box 1040, 3000 Leuven, Belgium;
Shawna McCallin Department of Neuro-Urology, Balgrist University Hospital, University of Zürich, Forchstrasse 340, 8008 Zürich, Switzerland;
Dino McMahon Institute of Biology, Freie Universität Berlin, Schwendenerstr. 1, 14195 Berlin, Germany;
Thomas Rattei Division of Computational Systems Biology, Centre for Microbiology and Environmental Systems Science, University of Vienna, Althanstraße 14, 1090 Vienna, Austria;
Ronald P. Van Rij Department of Medical Microbiology, Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, P.O. Box 9101, 6500 HB Nijmegen, The Netherlands;
David L. Robertson MRC, University of Glasgow Centre for Virus Research (CVR), 464 Bearsden Road, Glasgow G61 1QH, UK;
Martin Schwemmle Institute of Virology, Medical Center—University of Freiburg, Hermann-Herder-Strasse 11, 79104 Freiburg, Germany;
Noam Stern-Ginossar Department of Molecular Genetics, Weizmann Institute of Science, Rehovot 7610001, Israel;
Manja Marz RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University, 07743 Jena, Germany; FLI Leibniz Institute for Age Research, 07745 Jena, Germany Correspondence: ; Tel.: +49-3641-9-46480

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Rational Design of Profile Hidden Markov Models for Viral Classification and Discovery. Bioinformatics 2021. [DOI: 10.36255/exonpublications.bioinformatics.2021.ch9] [Citation(s) in RCA: 0] [Impact Index Per Article: 0] [Reference Citation Analysis] [Track Full Text] [Journal Information] [Subscribe] [Scholar Register] Open

Hufsky F, Beerenwinkel N, Meyer IM, Roux S, Cook GM, Kinsella CM, Lamkiewicz K, Marquet M, Nieuwenhuijse DF, Olendraite I, Paraskevopoulou S, Young F, Dijkman R, Ibrahim B, Kelly J, Le Mercier P, Marz M, Ramette A, Thiel V. The International Virus Bioinformatics Meeting 2020. Viruses 2020;12:E1398. [PMID: 33291220 PMCID: PMC7762161 DOI: 10.3390/v12121398] [Citation(s) in RCA: 3] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 11/30/2020] [Accepted: 12/01/2020] [Indexed: 12/16/2022] Open

Affiliation(s)

Franziska Hufsky European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, 07743 Jena, Germany
Niko Beerenwinkel European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) Department of Biosystems Science and Engineering, ETH Zurich, 4058 Basel, Switzerland SIB Swiss Institute of Bioinformatics, 4058 Basel, Switzerland
Irmtraud M. Meyer European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) Max Delbrück Center for Molecular Medicine in the Helmholtz Association, Berlin Institute for Medical Systems Biology, 10115 Berlin, Germany Department of Biology, Chemistry and Pharmacy, Institute of Chemistry and Biochemistry, Freie Universität Berlin, 14195 Berlin, Germany
Simon Roux Lawrence Berkeley National Laboratory, DOE Joint Genome Institute, Berkeley, CA 94720, USA;
Georgia May Cook European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) Department of Pathology, Division of Virology, University of Cambridge, Cambridge CB2 1TN, UK
Cormac M. Kinsella European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) Laboratory of Experimental Virology, Department of Medical Microbiology and Infection Prevention, Amsterdam UMC, University of Amsterdam, 1105 AZ Amsterdam, The Netherlands
Kevin Lamkiewicz European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, 07743 Jena, Germany
Mike Marquet European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) CaSe Group, Institut für Infektionsmedizin und Krankenhaushygiene, Universitätsklinikum Jena, 07743 Jena, Germany
David F. Nieuwenhuijse European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) Viroscience Department, Erasmus MC, 3015 GD Rotterdam, The Netherlands
Ingrida Olendraite European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) Department of Pathology, Division of Virology, University of Cambridge, Cambridge CB2 1TN, UK
Sofia Paraskevopoulou European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) Institute of Virology, Charité-Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin, Humboldt-Universität zu Berlin, and Berlin Institute of Health, 10117 Berlin, Germany
Francesca Young MRC-University of Glasgow Centre for Virus Research, Glasgow G61 1QH, UK;
Ronald Dijkman European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) Institute of Virology and Immunology, University of Bern, 3012 Bern, Switzerland Department of Infectious Diseases and Pathobiology, Vetsuisse Faculty, University of Bern, 3012 Bern, Switzerland Institute for Infectious Diseases, University of Bern, 3012 Bern, Switzerland
Bashar Ibrahim European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) Centre for Applied Mathematics and Bioinformatics, Hawally 32093, Kuwait Department of Mathematics and Natural Sciences Gulf University for Science and Technology, Hawally 32093, Kuwait
Jenna Kelly European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) Institute of Virology and Immunology, University of Bern, 3012 Bern, Switzerland
Philippe Le Mercier European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) Swiss-Prot Group, SIB Swiss Institute of Bioinformatics, 1205 Geneva, Switzerland
Manja Marz European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, 07743 Jena, Germany
Alban Ramette European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) Institute for Infectious Diseases, University of Bern, 3012 Bern, Switzerland
Volker Thiel European Virus Bioinformatics Center, 07743 Jena, Germany; (N.B.); (I.M.M.); (G.M.C.); (C.M.K.); (K.L.); (M.M.); (D.F.N.); (I.O.); (S.P.); (R.D.); (B.I.); (J.K.); (P.L.M.); (M.M.); (A.R.); (V.T.) Institute of Virology and Immunology, University of Bern, 3012 Bern, Switzerland

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Hufsky F, Ibrahim B, Modha S, Clokie MRJ, Deinhardt-Emmer S, Dutilh BE, Lycett S, Simmonds P, Thiel V, Abroi A, Adriaenssens EM, Escalera-Zamudio M, Kelly JN, Lamkiewicz K, Lu L, Susat J, Sicheritz T, Robertson DL, Marz M. The Third Annual Meeting of the European Virus Bioinformatics Center. Viruses 2019;11:E420. [PMID: 31060321 PMCID: PMC6563321 DOI: 10.3390/v11050420] [Citation(s) in RCA: 4] [Impact Index Per Article: 0.8] [Reference Citation Analysis] [Abstract] [Key Words] [MESH Headings] [Grants] [Track Full Text] [Download PDF] [Figures] [Journal Information] [Subscribe] [Scholar Register] [Received: 04/28/2019] [Accepted: 04/29/2019] [Indexed: 01/21/2023] Open

Affiliation(s)

Franziska Hufsky European Virus Bioinformatics Center, 07743 Jena, Germany. RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, 07743 Jena, Germany.
Bashar Ibrahim European Virus Bioinformatics Center, 07743 Jena, Germany. Chair of Bioinformatics, Matthias-Schleiden-Institute, Friedrich Schiller University Jena, 07743 Jena, Germany.
Sejal Modha MRC-University of Glasgow Centre for Virus Research, Glasgow G61 1QH, UK.
Martha R J Clokie Department of Genetics and Genome Biology, University of Leicester, Leicester LE1 7RH, UK.
Stefanie Deinhardt-Emmer European Virus Bioinformatics Center, 07743 Jena, Germany. Institute of Medical Microbiology, Jena University Hospital, Am Klinikum 1, D-07747 Jena, Germany. Section for Experimental Virology, Jena University Hospital, Hans-Knöll-Straße 2, D-07745 Jena, Germany. Center for Sepsis Control and Care, Jena University Hospital, D-07747 Jena, Germany.
Bas E Dutilh European Virus Bioinformatics Center, 07743 Jena, Germany. Theoretical Biology and Bioinformatics, Science4Life, Utrecht University, Padualaan 8, Utrecht 3584 CH, The Netherlands. Centre for Molecular and Biomolecular Informatics, Radboud Institute for Molecular Life Sciences, Radboud University Medical Centre, Geert Grooteplein 26, Nijmegen 6525 GA, The Netherlands.
Samantha Lycett Infection & Immunity Division, Roslin Institute, University of Edinburgh, Midlothian EH25 9RG, UK.
Peter Simmonds Nuffield Department of Medicine, University of Oxford, Peter Medawar Building, South Parks Road, Oxford OX1 3SY, UK.
Volker Thiel European Virus Bioinformatics Center, 07743 Jena, Germany. Institute of Virology and Immunology, 3012 Bern, Switzerland. Department of Infectious Diseases and Pathobiology, Vetsuisse Facility, University of Bern, 3012 Bern, Switzerland.
Aare Abroi University of Tartu, Institute of Technology, 50411 Tartu, Estonia.
Evelien M Adriaenssens European Virus Bioinformatics Center, 07743 Jena, Germany. Quadram Institute Bioscience, Norwich Research Park, Norwich NR4 7UQ, UK.
Marina Escalera-Zamudio Department of Zoology, University of Oxford, Parks Rd, Oxford OX1 3PS, UK.
Jenna Nicole Kelly Institute of Virology and Immunology, 3012 Bern, Switzerland. Department of Infectious Diseases and Pathobiology, Vetsuisse Facility, University of Bern, 3012 Bern, Switzerland.
Kevin Lamkiewicz European Virus Bioinformatics Center, 07743 Jena, Germany. RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, 07743 Jena, Germany.
Lu Lu Usher Institute of Population Health Sciences & Informatics, Ashworth Laboratories, Kings Buildings, University of Edinburgh, Charlotte Auerbach Road, Edinburgh EH9 3FL, UK.
Julian Susat Institute of Clinical Molecular Biology, Kiel University, 24118 Kiel, Germany.
Thomas Sicheritz Natural History Museum of Denmark, University of Copenhagen, DK-1123 Copenhagen, Denmark.
David L Robertson European Virus Bioinformatics Center, 07743 Jena, Germany. MRC-University of Glasgow Centre for Virus Research, Glasgow G61 1QH, UK.
Manja Marz European Virus Bioinformatics Center, 07743 Jena, Germany. RNA Bioinformatics and High-Throughput Analysis, Friedrich Schiller University Jena, 07743 Jena, Germany.

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